mRNA_9579 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|130521 vs. uniprot
Match: A0A835YXT1_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT1_9STRA) HSP 1 Score: 462 bits (1190), Expect = 3.770e-164 Identity = 232/248 (93.55%), Postives = 236/248 (95.16%), Query Frame = 1 Query: 1 CTRWAVVTTIFAPTAATKAVDQWWPKWCLLVIADKAGPDAAEYPLEHGIYVSVEVQQSLAKASPFIAALPWNHFGRKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLSWVLDSESGIVSAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEVRPI-KVAVLQALAGHDPDVDAIYRLTRPLPLYFNFEPEKILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTV 741 CTRWAVVTTIFAPTAATKAVDQW P W LLVIADKAGPDAAEYPLE GIYVSVEVQQSLAKASP IAALPWNHFG KNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPL+WVL+SESGI+ AARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIE KVAVLQALAGHDPDVDAIYRLT+PLPLYFNFEPEKILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTV Sbjct: 2 CTRWAVVTTIFAPTAATKAVDQWGPNWYLLVIADKAGPDAAEYPLERGIYVSVEVQQSLAKASPLIAALPWNHFGIKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLAWVLNSESGIIPAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEANVTSKVAVLQALAGHDPDVDAIYRLTQPLPLYFNFEPEKILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTV 249
BLAST of jgi.p|Trimin1|130521 vs. uniprot
Match: A0A818LZ82_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818LZ82_9BILA) HSP 1 Score: 187 bits (474), Expect = 9.760e-54 Identity = 102/247 (41.30%), Postives = 144/247 (58.30%), Query Frame = 1 Query: 1 CTRWAVVTTIFAPTAATKAVDQWWPKWCLLVIADKAGPDAAEYPLEHGIYVSVEVQQSLAKASPFIAALPWNHFGRKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLSWVLDSESGIVSAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEVRPIKVAVLQALAGHDPDVDAIYRLTRPLPLYFNFEPEKILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTV 741 C W VVTTIF P+ A + + WC++V+ADK + Y + + +Y+SVE Q+ L F+ +PWNHFGRKN+GYL A L GA+ ++D DDDNVL + + P S + + S FN YP+MGA++ P WPRGFPL+ IK E C + EV +V + Q+LA +DPDVDAIYR+T PLPL+F + + PYNAQA++H++ + +LLP+TV Sbjct: 39 CDSWVVVTTIFPPSEAVQKAARL-DGWCVVVVADKKS--SPSYYVSNIVYLSVEAQKKLVNHYKFVQLIPWNHFGRKNIGYLYAILQGAQYIFDLDDDNVLKQSHISPPKSVIEMTVSNCT-----------VFNVYPTMGASKHPSWPRGFPLEKIKQE------CYWTQERREVHKDEVVIFQSLADNDPDVDAIYRMTLPLPLHFKSHTS--VGIPPGVFVPYNAQASMHYRKSFWGLLLPITV 263
BLAST of jgi.p|Trimin1|130521 vs. uniprot
Match: A0A0G4IGI5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IGI5_PLABS) HSP 1 Score: 181 bits (459), Expect = 1.050e-50 Identity = 107/254 (42.13%), Postives = 145/254 (57.09%), Query Frame = 1 Query: 1 CTRWAVVTTIFAPTAATKAVDQWWPKWCLLVIADKAGPDAAEYPLEHG---IYVSVEVQQSLAKASP-FIAALPWNHFGRKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLSWVLDSESGIVSAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEVRPIKVAVLQALAGHDPDVDAIYRLTRPLPLYFNFEPEKI---LLVSRRTLSPYNAQATLHFKAGLFAMLLPVTV 741 C +W+VVTTIF P+ A K P WC++++ D+ P Y +E +Y+ Q++ K P F + L WNHFGRKNVG+L A HGA+ +WDFDDDN+L K + + E V + P +NPY MGA SP WPRG PL IK + + S V+ VA++Q+LA HDPD+DAIYRLT PLP FNF+P +++ +TL+P NAQA L +A + +LLPVTV Sbjct: 117 CKQWSVVTTIFEPSDAVKKQANLGPDWCIVIVGDRKSPPV--YHVEGSSTIVYLDANDQETFGKEFPEFFSTLNWNHFGRKNVGFLYAIAHGAQAIWDFDDDNIL---KDHADIKVPGEDEDYSVDLPKDHDFP--TYNPYVKMGAPHSPSWPRGIPLTHIKDSGSWK----SSLQRARVKGRDVALIQSLADHDPDMDAIYRLTMPLP--FNFQPPSDAAPIVLPPKTLAPLNAQACLFRRAAFWMLLLPVTV 357
BLAST of jgi.p|Trimin1|130521 vs. uniprot
Match: A0A812JXG3_SYMPI (STL1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812JXG3_SYMPI) HSP 1 Score: 174 bits (440), Expect = 1.460e-49 Identity = 106/257 (41.25%), Postives = 150/257 (58.37%), Query Frame = 1 Query: 4 TRWAVVTTIFAPTAATKAVDQWWPKWCLLVIADKAGPDAAEYPL--EHGIY-VSVEVQQSLAKASPFIAALPWNHFGRKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLSWVLDSESGIVSAARKCRGPGA------AFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEVRPIKVAVLQALAGHDPDVDAIYRLTRPLPLYFNFEP--EKILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTV 741 TRWAV+TTI PT A + + + WC+ VI+D GP + P HG++ ++ +Q+ LA S F++++PWNHFGRKN+GYL+A GA+V+WDFDDDN++ A + +SGI+ GPGA N Y ++G PCWPRGFPL +S A + S+ + +VAVLQ+LA DPDVDAI+RLT P F+P +++L + T P NAQA LH + + +LLP+TV Sbjct: 33 TRWAVLTTINGPTPAVQQLAEA-DGWCIAVISDLKGPARYDLPRASSHGLFFLNASLQKKLAADSTFVSSIPWNHFGRKNLGYLVAIARGAQVIWDFDDDNLVTAGDFP---DFPRGLDSGILQVLWT-PGPGAHLGSGGVLNIYSALGCPVWPCWPRGFPLSLARSRAPNRSEWLQSS-ELSKPSKRVAVLQSLADKDPDVDAIFRLTSPSATEIYFQPPGKEVLALPAFTFCPANAQAALHRRDAFWGLLLPMTV 283
BLAST of jgi.p|Trimin1|130521 vs. uniprot
Match: A0A8B7XWL1_ACAPL (probable glycosyltransferase STELLO2 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XWL1_ACAPL) HSP 1 Score: 176 bits (447), Expect = 2.860e-49 Identity = 110/247 (44.53%), Postives = 139/247 (56.28%), Query Frame = 1 Query: 1 CTRWAVVTTIFAPTAATKAVDQWWPKWCLLVIADKAGPDAAEYPLEHGIYVSVEVQQSLAKASPFIAALPWNHFGRKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLSWVLDSESGIVSAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEVRPIKVAVLQALAGHDPDVDAIYRLTRPLPLYFNFEPEKILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTV 741 C RW VVTTI+ PT + WC++V+ADK GP + P + Y+ V Q+S +PWNHFGRKN+GYL A HGA++++D DDDN PL + + V AR GA +NPYP+ G WPRGFPL IK ++ +A S + P +V V+Q LA HDPDVDAIYRLT LP FN P + L+V +R SPYNAQATLH + MLLPVTV Sbjct: 96 CDRWIVVTTIYKPTPILPKISSL-KGWCMVVVADKKGPQSMNIP--NVDYLDVVQQESCGYK--LCRVVPWNHFGRKNIGYLYAIEHGAKLIYDTDDDNA--------PLFPEVPAFDN-VGYARYVTAGGAVWNPYPTFGQNTK-VWPRGFPLSRIKDQSTKI-----AAESGKALPQQVGVVQFLAQHDPDVDAIYRLTSELPFDFNPTPRR-LVVPKRMFSPYNAQATLHAHDAFWGMLLPVTV 321
BLAST of jgi.p|Trimin1|130521 vs. uniprot
Match: UPI0014582C46 (probable glycosyltransferase STELLO2 isoform X2 n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI0014582C46) HSP 1 Score: 174 bits (440), Expect = 6.840e-48 Identity = 105/264 (39.77%), Postives = 146/264 (55.30%), Query Frame = 1 Query: 1 CTRWAVVTTIFAPTAATKAVDQWWPKWCLLVIADKAGPDAAEYPLEHGI----------YVSVEVQQSLAKASPFIA-ALPWNHFGRKNVGYLIAALHGAEVVWDFDDDNV----LNAAKAAGPLSWVLDSESGIVSAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEVRPIKVAVLQALAGHDPDVDAIYRLTRPLPLYFNFEPE--KILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTV 741 C WAVVTT+F+P+ A + + WCL+++AD P ++Y E G Y+SV Q +K P +A A+P N FGRKN+GY+ A H A +WDFDDDN LN K + PLS+V D ++ NPYP G ES WPRGFPLQDIK++ C S + +K+ ++Q+LA PD+DAIYRLTR +P F P+ + L++ R + +P+NAQATL F +LLP++V Sbjct: 130 CDNWAVVTTVFSPSKAVQHIASL-TNWCLVIVADMKTPPESKYLFEMGNVNHITRKRVKYLSVPEQ---SKLYPLLAEAIPLNTFGRKNIGYMYAIHHEANYIWDFDDDNFGLIELNDFKPSNPLSYVTDCKA----------AHNTLLNPYPYFGVAESYTWPRGFPLQDIKNKTTLPKLCTKSTS------VKLGIVQSLANKQPDIDAIYRLTRDIPFNFRATPKSHRPLVLPRNSYTPFNAQATLWFAPAFPYLLLPISV 373
BLAST of jgi.p|Trimin1|130521 vs. uniprot
Match: D7FLI5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLI5_ECTSI) HSP 1 Score: 166 bits (420), Expect = 1.220e-45 Identity = 117/265 (44.15%), Postives = 149/265 (56.23%), Query Frame = 1 Query: 1 CTRWAVVTTIFAPTAATKAVDQWWPKWCLLVIADKAGPDAAEYPLEHGIYVSVEVQQSLAKASPFIAALPWNHFGRKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLSWVLDSESGIVSAARKCRGPGA-AFNPYPSMGATESPCWPRGFPLQDIK---SEAASELA---CGHSAASIEVRPIKVAVLQALAGHDPDVDAIYRLTRP---LPLYFNFE-----PE---KILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTV 741 C RWAV+T+IF PT + + WC++V+ D+ GP AEY +E IY++ + Q+ L + LPWNHFGRKN+GYL A HGA V++D DDDN L +A P + + + S A GP A NPY G + WPRGFPL I S E+A G SAA E ++ V+QALA HDPDVDA+YRLT P LP F+FE PE + +V +PYNAQATLHF + MLLPVTV Sbjct: 28 CERWAVLTSIFEPTDTVRQLGAA-EDWCVVVVGDQNGP--AEYNVEGVIYLTPQDQEQLPYR--IVPLLPWNHFGRKNIGYLYAVHHGATVIYDVDDDNALIHPEAGVPHALSPVTPASTTSFAV---GPEAFVHNPYGCFGGPGN-VWPRGFPLDSINDADSNRCDEVAVDSAGESAAPEE--GWRLGVVQALANHDPDVDAVYRLTYPPGGLP--FDFEVPDPVPEGMSSLKIVPPAAFTPYNAQATLHFPPAFWGMLLPVTV 279
BLAST of jgi.p|Trimin1|130521 vs. uniprot
Match: A0A1S3JBQ2_LINUN (probable glycosyltransferase STELLO2 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JBQ2_LINUN) HSP 1 Score: 166 bits (421), Expect = 2.160e-45 Identity = 99/247 (40.08%), Postives = 140/247 (56.68%), Query Frame = 1 Query: 1 CTRWAVVTTIFAPTAATKAVDQWWPKWCLLVIADKAGPDAAEYPLEHGIYVSVEVQQSLAKASPFIAALPWNHFGRKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLSWVLDSESGIVSAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEVRPIKVAVLQALAGHDPDVDAIYRLTRPLPLYFNFEPEKILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTV 741 C +W V+TTIF P+ K + + WC++V+ADK GP+ +Y + + Y+SV Q+S L WNHFGRKN+GY+ A HGAE ++D DDDNVL AK P + + G +NPYP M WPRGFPL+ IKS+ A + + E+ K+ ++Q+LA ++PDVDAIYR T+PLP F+ + E + V + ++PYNAQAT+ F+ LPVTV Sbjct: 102 CKKWVVITTIFEPSELVKQLSEI-TSWCVVVVADKKGPE--KYVVPNVKYLSVLEQESCQ--FHICKLLIWNHFGRKNIGYMYAIHHGAEYIYDTDDDNVLRRAKIPDPAK---------IKGVKNINMKGTVWNPYPMMSKYPD-SWPRGFPLEKIKSKEAKT-----QSFTDELPLGKIGIIQSLADNEPDVDAIYRFTQPLPFDFHHK-ELYVAVPQGVMTPYNAQATMTMYDAFFSTYLPVTV 327
BLAST of jgi.p|Trimin1|130521 vs. uniprot
Match: W7TUS0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUS0_9STRA) HSP 1 Score: 169 bits (428), Expect = 1.500e-44 Identity = 101/258 (39.15%), Postives = 151/258 (58.53%), Query Frame = 1 Query: 1 CTRWAVVTTIFAPTAATKAVDQWWPKWCLLVIADKAGPDAAEYPLEHGIYVSVEVQQSLAKASPF--IAALPWNHFGRKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLSWVLDSESGIVSAARKC--RGPGAAFNPYPSMGATE----SPC--WPRGFPLQDIKSEAASELACGHSAASIEVRPIKVAVLQALAGHDPDVDAIYRLTRPLPLYFNFEPE-KILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTV 741 C +WAVVTTIF PTA K + + WC++V+ D+ P + ++ I++ E Q++L P+ I L WNHFGRKN+G+L A HGAEV++D DDDN+L P + D + G ++ ++ G +NPYP+ G+ SP WPRGFP+ I + ++ G ++E I + +Q+LA HDPDVDA+YRLT LPL F+ ++ ++ ++P+NAQAT+ KAG + MLLP+TV Sbjct: 106 CNKWAVVTTIFGPTALVKQLVEM-KDWCVVVVGDQQSPSTYDIQSDNLIFLGPEEQEAL----PYHIIPLLKWNHFGRKNIGFLYAMQHGAEVIYDTDDDNILKVDSRGKPF--IPDCKLGELALSKDVVRSGQSQVYNPYPNFGSVRVKDGSPAFVWPRGFPVDLITDASTWNVSLGVEEETLEGGVITI--VQSLADHDPDVDALYRLTSHLPLRFHSGGSARLEVIPPGVMTPFNAQATVFGKAGFWGMLLPITV 354
BLAST of jgi.p|Trimin1|130521 vs. uniprot
Match: UPI0014553AFF (probable glycosyltransferase STELLO2 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014553AFF) HSP 1 Score: 164 bits (414), Expect = 1.710e-44 Identity = 102/247 (41.30%), Postives = 138/247 (55.87%), Query Frame = 1 Query: 1 CTRWAVVTTIFAPTAATKAVDQWWPKWCLLVIADKAGPDAAEYPLEHGIYVSVEVQQSLAKASPFIAALPWNHFGRKNVGYLIAALHGAEVVWDFDDDNVLNAAKAAGPLSWVLDSESGIVSAARKCRGPGAAFNPYPSMGATESPCWPRGFPLQDIKSEAASELACGHSAASIEVRPIKVAVLQALAGHDPDVDAIYRLTRPLPLYFNFEPEKILLVSRRTLSPYNAQATLHFKAGLFAMLLPVTV 741 C RW VVTTIF PT K + WC++V+ADK GP + + P + ++++V Q++ +PWNHF RKN+GY+ A HGA+V++D DDDN L A + D E V A+ + +NPYP G + WPRGFPL I + L +A ++ V+Q LA HDPDVDAIYR+T LP FN EP++ +L R LSPYNAQ T H + + MLLP+TV Sbjct: 87 CDRWIVVTTIFEPTGIMKTLGAT-SGWCMVVVADKKGPVSMDIP--NIVHLTVAEQKNCRYR--ICQLIPWNHFSRKNIGYMYAIEHGAKVIYDTDDDNGLLA-------DLMPDFE---VHFAQHVKLDSYVWNPYPEFGPSTH-IWPRGFPLNRITDDTTKSLTLVGAAKGEDI-----GVVQYLAQHDPDVDAIYRMTYDLPYDFNLEPKRFVLPPR-VLSPYNAQTTHHSQDAFWGMLLPITV 311 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|130521 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9579 ID=mRNA_9579|Name=jgi.p|Trimin1|130521|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=741bp|location=Sequence derived from alignment at Contig_29:430436..435406+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TGCACCCGTTGGGCAGTTGTCACCACAATATTTGCGCCCACCGCTGCCACback to top protein sequence of jgi.p|Trimin1|130521 >Trimin1|130521|gw1.29.9.1 ID=Trimin1|130521|gw1.29.9.1|Name=jgi.p|Trimin1|130521|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=247bp CTRWAVVTTIFAPTAATKAVDQWWPKWCLLVIADKAGPDAAEYPLEHGIYback to top mRNA from alignment at Contig_29:430436..435406+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9579 ID=mRNA_9579|Name=jgi.p|Trimin1|130521|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4971bp|location=Sequence derived from alignment at Contig_29:430436..435406+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_29:430436..435406+ >mRNA_9579 ID=mRNA_9579|Name=jgi.p|Trimin1|130521|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=741bp|location=Sequence derived from alignment at Contig_29:430436..435406+ (Tribonema minus UTEX_B_3156 )back to top |