mRNA_9139 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349501 vs. uniprot
Match: A0A835Z1P0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1P0_9STRA) HSP 1 Score: 1753 bits (4539), Expect = 0.000e+0 Identity = 890/890 (100.00%), Postives = 890/890 (100.00%), Query Frame = 1 Query: 1 MQMRRERNPPYSLRRDGAPEQDLNPSFLRGAFSLLLKLSARPGRRSLAHHAFYGDHLLKNVVVEHMEYKFRVVGESMRGRSDHECMQPYVRRETQAAFFDFVKLQDPAANNPDFNLHAKADKRNVGPEWVHYDLGPGNDLYAIAEVIDADGRAGYHLHILDAATVYSTWKYQGRVMLGPVVRDSKELRWDQVLDNMCGQAITSGQAVGACGLVSDAYTQGSGPALLAASRFQSYSPDSVALSTDKNVGGLLADLMITNAVATDKADTSTALTGVAQVDMFLCGDEDCAVMADLMYIAPTSPTPDSGANAITIATAYSRFPNSKAGIGSHYMPDGATATLFNYDKVGSANAAVEPRATDSLGINKYHTQLNRVVWSLPATNLTAAAASIADSSGGGLSSMDRASAGAPAPKQAEQWLEGLPTLTNMGIQTRLFGAESLGNADWSKLRIGTYELGNGDCVNIINFVHEWMNTHGWGTSVVCEGTAAPKRTYIFDSYFPQAHLQWPPTSPLNNGDIVFDTVLTAAATGSWYNYGAGPVNTFTYNVADKTVDVSPGSLAPTLICDRQDGNSETTGAGSVDCYVSTQHTTAGALGYTGERPWMLPYSNDGDTADTAGKYVVLPLRGDVAAILAIDITEPALGHTDALHAGGVARLVAGTIADYDNTAEAGNPVHFTATAALLKLGVMANSGNVAGAIYAFIVTIIAIIATYASRKDTAHVLSKALPSAVAVALTAMVNIFAVVTPALLLAWSELDARSSNPSGNESTVTWLDVPAGGYGKYKVVAIVSTSYTAAYNTAAQALMWCNVALACVCGALMVFAIARQYRAGSFTKGKVAGVIEDVRRPRSYTHDAPALSGAERSSASLNFANTLSMKVHELPAPVRMHAPLGGGDSVA 2670 MQMRRERNPPYSLRRDGAPEQDLNPSFLRGAFSLLLKLSARPGRRSLAHHAFYGDHLLKNVVVEHMEYKFRVVGESMRGRSDHECMQPYVRRETQAAFFDFVKLQDPAANNPDFNLHAKADKRNVGPEWVHYDLGPGNDLYAIAEVIDADGRAGYHLHILDAATVYSTWKYQGRVMLGPVVRDSKELRWDQVLDNMCGQAITSGQAVGACGLVSDAYTQGSGPALLAASRFQSYSPDSVALSTDKNVGGLLADLMITNAVATDKADTSTALTGVAQVDMFLCGDEDCAVMADLMYIAPTSPTPDSGANAITIATAYSRFPNSKAGIGSHYMPDGATATLFNYDKVGSANAAVEPRATDSLGINKYHTQLNRVVWSLPATNLTAAAASIADSSGGGLSSMDRASAGAPAPKQAEQWLEGLPTLTNMGIQTRLFGAESLGNADWSKLRIGTYELGNGDCVNIINFVHEWMNTHGWGTSVVCEGTAAPKRTYIFDSYFPQAHLQWPPTSPLNNGDIVFDTVLTAAATGSWYNYGAGPVNTFTYNVADKTVDVSPGSLAPTLICDRQDGNSETTGAGSVDCYVSTQHTTAGALGYTGERPWMLPYSNDGDTADTAGKYVVLPLRGDVAAILAIDITEPALGHTDALHAGGVARLVAGTIADYDNTAEAGNPVHFTATAALLKLGVMANSGNVAGAIYAFIVTIIAIIATYASRKDTAHVLSKALPSAVAVALTAMVNIFAVVTPALLLAWSELDARSSNPSGNESTVTWLDVPAGGYGKYKVVAIVSTSYTAAYNTAAQALMWCNVALACVCGALMVFAIARQYRAGSFTKGKVAGVIEDVRRPRSYTHDAPALSGAERSSASLNFANTLSMKVHELPAPVRMHAPLGGGDSVA Sbjct: 1 MQMRRERNPPYSLRRDGAPEQDLNPSFLRGAFSLLLKLSARPGRRSLAHHAFYGDHLLKNVVVEHMEYKFRVVGESMRGRSDHECMQPYVRRETQAAFFDFVKLQDPAANNPDFNLHAKADKRNVGPEWVHYDLGPGNDLYAIAEVIDADGRAGYHLHILDAATVYSTWKYQGRVMLGPVVRDSKELRWDQVLDNMCGQAITSGQAVGACGLVSDAYTQGSGPALLAASRFQSYSPDSVALSTDKNVGGLLADLMITNAVATDKADTSTALTGVAQVDMFLCGDEDCAVMADLMYIAPTSPTPDSGANAITIATAYSRFPNSKAGIGSHYMPDGATATLFNYDKVGSANAAVEPRATDSLGINKYHTQLNRVVWSLPATNLTAAAASIADSSGGGLSSMDRASAGAPAPKQAEQWLEGLPTLTNMGIQTRLFGAESLGNADWSKLRIGTYELGNGDCVNIINFVHEWMNTHGWGTSVVCEGTAAPKRTYIFDSYFPQAHLQWPPTSPLNNGDIVFDTVLTAAATGSWYNYGAGPVNTFTYNVADKTVDVSPGSLAPTLICDRQDGNSETTGAGSVDCYVSTQHTTAGALGYTGERPWMLPYSNDGDTADTAGKYVVLPLRGDVAAILAIDITEPALGHTDALHAGGVARLVAGTIADYDNTAEAGNPVHFTATAALLKLGVMANSGNVAGAIYAFIVTIIAIIATYASRKDTAHVLSKALPSAVAVALTAMVNIFAVVTPALLLAWSELDARSSNPSGNESTVTWLDVPAGGYGKYKVVAIVSTSYTAAYNTAAQALMWCNVALACVCGALMVFAIARQYRAGSFTKGKVAGVIEDVRRPRSYTHDAPALSGAERSSASLNFANTLSMKVHELPAPVRMHAPLGGGDSVA 890
BLAST of jgi.p|Trimin1|349501 vs. uniprot
Match: A0A835YRT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRT5_9STRA) HSP 1 Score: 505 bits (1301), Expect = 3.420e-158 Identity = 329/774 (42.51%), Postives = 418/774 (54.01%), Query Frame = 1 Query: 535 PVVRDSKELRWDQVLDNMCGQAITSGQAVGACGLVSDAYTQGSGPALLAASRFQSYSPDSVALSTDKNVGGLLADLMITNAVATDKADTSTALTGVAQVDMFLCGDEDCAVMADLMYIAPTSPTPDSGANAITIATAYSRFPNSKAGIGSHYMPDGATATLFNYDKVGSANAAVEPRATDSLGINKYHTQLNRVVWSLPATNLTAAAASIADSSGGGLSSMDRASAGAPAPKQAEQWLEGLPTLTNMGIQTRLFGAESLGNADWSKLRIGTYELGNGDCVNIINFVHEWMNTHGWGTSVVCEGTAAPKRTYIFDSYFPQAHLQWPPTSPLNNGDIVFDTVLTAAATGSWYNYGAGPVNTFTYNVADKTV---DVSPGSLAPTLICDR-QDGNSETTGAGSVDCYVSTQHTTAGALGYTGERPWMLPYSNDGDTA--DTAGKYVVLPLRGDVAAILAIDITEPALGHTDALHAGGVARLVA-GTIADYDNTAEAGNP-VHFTATAALLKL----------------------------------------------------------------------------------------------------------------------------GVMANSGNVAGAIYAFIVTIIAIIATYASRKDTAHVLSKALPSAVAVALTAMVNIFAVVTPALLLAWSELDARSSNPSGN--ESTVTWLDVPAGGYGKYKVVAIVSTSYTAAYNTAAQALMWCNVALACVCGALMVFAIAR 2454 P D ++ WD D CG A+ SGQAVGACGL Y GSG ALL SRF+S++P + ALSTD+NV G+LAD++ITN T + D + AL G AQVD FLC D C VMADLMY+APT+P D NAITIATAY+RFPNSK G+ +Y+PD L++Y KV S N A N Y ++L +VVWSLP + + D++ + + + +A A A EQW E +PTL +G TRLFG+E+L N DWS+LRIGTYEL NGDCV II+FVHEWM+ GWGTSVVC A P RTYIFDSYFPQA +QWPPT + G VF+ A +G W +G G VA +T SP L+ +++CD Q NSET GAG++ CY +T +TGE P+++PY+ G A DT GK+VVLPLRG A +LA+DITEPAL H G V L A GT DYDN A A P V+ +A ALLKL G+M S VAGA+YA ++++A+IA YASR+DT H+ K P AVALTA+V++FAV+TPALL A E+DAR SNPSG+ + VTW A GYG Y+VVA+VSTSYTA Y++AA+ ++WCN+ALA V L++ + R Sbjct: 424 PSGSDGNDMTWDGSADGFCGAALISGQAVGACGLSGTRYFGGSGTALLGMSRFRSFAPGAPALSTDRNVAGVLADVIITNNKKTSRVDLAKALQGTAQVDFFLCSDPTCVVMADLMYVAPTAPATDG--NAITIATAYTRFPNSKTGVHGYYIPDSMHGALYDYSKV-SFNTT---EAATGAARNPY-SKLQQVVWSLPVGVAAHPSGTTLDAATAAVEASAKTTAAAAAVA-TEQWFEAMPTLFEVGGATRLFGSEALANIDWSQLRIGTYELTNGDCVTIISFVHEWMDGRGWGTSVVCASGAPPTRTYIFDSYFPQASVQWPPTKD-DAGQYVFEAAAPGARSG-WKAFGTG--------VAGETALDDSASPTLLSLSVLCDDFQFKNSETVGAGNITCYTTTLDLAISQAAHTGEPPYIVPYTRGGADAEVDTGGKHVVLPLRGTFATVLALDITEPALRPAAGRHGGAVGLLTADGTTFDYDNQAAATPPPVNKSAPRALLKLASMATGQVKPLPWLAGDNPDYVPWETYQHSVVTLPRGQVPLLDALDWETEGWGQLEPSPKLVRAPASSGAAMRARMAVSFVDLMSIVPGFTGYERGDVPALVSAMDKIAAGAAQALDAGISLQLGLMDASLTVAGALYALAISVVALIAIYASRRDTLHLFLKVAPPTAAVALTALVSVFAVLTPALLQAKGEVDARGSNPSGDGDSAVVTWQSASASGYGDYQVVAMVSTSYTATYDSAARVIVWCNLALAVVGSLLLMIGMLR 1179
BLAST of jgi.p|Trimin1|349501 vs. uniprot
Match: A0A835ZC60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC60_9STRA) HSP 1 Score: 164 bits (414), Expect = 5.220e-38 Identity = 127/392 (32.40%), Postives = 173/392 (44.13%), Query Frame = 1 Query: 589 CGQAITSGQAVGACGLVSDAYTQGSGPALLAASRFQSYSPDSVALSTDKNVGGLLADLMITNAVATDKADTSTALTGVAQVDMFLCGDEDCAVMADLMYIAPTSPTPDSGANAITIATAYSRFPNSKAGIGSHYMPDGATATLFNYDKVGSANAAVEPRATDSLGINKYHTQLNRVVWSLPATNLTAAAASIADSSGGGLSSMDRASAGAPAPKQAEQWLEGLPTLTNMGIQTRLFGAESLGNADWSKLRIGTYELGNGDCVNIINFVHEWMNTHGWGTSVVCEGTAAPKRTYIFDSYFPQAHLQWPPTSPLNNGDIVFDTVLTAAATGSWYNYGAGPVNTFT-----YNVADKTVDVSPGSLAPTLICDRQ-DGNSETTGAGSVDCYVSTQ 1746 C I SGQ V AC LV Y GS LL ASRF+ +S A STD N GLLAD ++ + + D S +T AQ+D+FLCGD+ C MADLMYI P + A T+A YSR N+ A + + Y+ D AT T +A+ P A QL+ V W + + +W+ PTL N R A ++G A+W +R G Y G CV +++ VH W + GWG S C AP TYIFDSYFPQA+L +P DIV+++ +++ G + Y P T + + V PG++ + C N E AG+ DC Q Sbjct: 48 CSDGIQSGQTVHACSLVDAGYVTGSAADLLMASRFKGFSAGKQAWSTDPNTVGLLADYTMSVHATSQRLDASKDITATAQLDLFLCGDDTCKAMADLMYITAAGDAPSTPA---TLAFGYSRLANTLAALPTRYL-DPATITSTLVPDAAAASPVSVPGA-----------QLSTVAWQI----------------------------------EDPEWVANYPTLLNTASLAR---ALAIGGANWDVVRAGRYRDARGVCVTVLSPVHPWFDAMGWGASDEC----APTETYIFDSYFPQAYLDLDSGAPY---DIVYNS-SSSSWDGDAFVYDLAPPARATPWGWRASAFAQQKLVGPGAMGRAVCCPLALFENKEVAAAGAHDCNAGHQ 379
BLAST of jgi.p|Trimin1|349501 vs. uniprot
Match: A0A836CJG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJG8_9STRA) HSP 1 Score: 160 bits (404), Expect = 9.720e-37 Identity = 123/409 (30.07%), Postives = 171/409 (41.81%), Query Frame = 1 Query: 589 CGQAITSGQAVGACGLVSDAYTQGSGPALLAASRFQSYSPDSVALSTDKNVGGLLADLMITNAVATDKADTSTALTGVAQ-----------VDMFLCGDEDCAVMADLMYIAPTSPTPDSGANAITIATAYSRFPNSKAGIGSHYM-PDGATATLFNYDKVGSANAAVEPRATDSLGINKYHTQLNRVVWSLPATNLTAAAASIADSSGGGLSSMDRASAGAPAPKQAEQWLEGLPTLTNMGIQTRLFGAESLGNADWSKLRIGTYELGNGDCVNIINFVHEWMNTHGWGTSVVCEGTAAPKRTYIFDSYFPQAHLQWPPTSPLNNGDIVFDTVLTAAATGSWYNYGAGPVNTFTYN----------VADKTVDVSPGSLAPTLICDRQ-DGNSETTGAGSVDCYVSTQ 1746 C I SGQ V AC LV Y GS LL ASRF+ +S A STD N GLLAD T + + D S +T Q +D+FLCGD+ C MADLMYI P + A T+ YSR N+ A + + Y+ P T+TL P A + ++ QLN VVW + + +W+ PTL N R ++G ADW +R G Y G CV +++ VH W + GWG S C AP TY+FDSYFPQA+L +P D+ +++ ++ T ++ A P + + +D PG++ + C N E AG+ DC + Q Sbjct: 49 CSDGIQSGQTVHACSLVDPGYVTGSAADLLMASRFKGFSAGKQAWSTDPNTVGLLADYTFTLQTTSQRLDASKDITATGQKRLPPXXXXXQLDLFLCGDDTCKAMADLMYITAAGDAPSTPA---TLTFGYSRLANTLAALPTRYLDPAALTSTLV-------------PDAAAASPVSVPGAQLNTVVWQI----------------------------------EDPEWVANYPTLLNAASLARTL---AIGGADWDAVRAGRYRDARGVCVTVLSPVHPWFDAMGWGASDDC----APTETYVFDSYFPQAYLDLDSGAPY---DVAYNSSSSSWDTHAYVYNLAPPARATPWGWRASQLASVVARGELIDAGPGAMGRAVCCPLALFENKEVAAAGAHDCEAAHQ 397
BLAST of jgi.p|Trimin1|349501 vs. uniprot
Match: A0A835YRB5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRB5_9STRA) HSP 1 Score: 143 bits (360), Expect = 1.180e-35 Identity = 73/137 (53.28%), Postives = 90/137 (65.69%), Query Frame = 1 Query: 16 ERNPPYSLRRDGAPEQDLNPSFLRGAFSLLLKLSARPGRRSLAHHAFYGDHLLKNVVVEHMEYKFRVVGESMRGRSDHECMQPYVRRETQAAFFDFVKLQDPAANNPDFNLHAKADKRNVGPEWVHYDLGPGNDLYA 426 ER PYSLR G PE D+N +LR AF+ L S G R++A HAFYGD L+K + VEH+E++FRV GE+ G SDHE +QPYV RE+QAAFFDFV LQ P NN DF+ H KADK ++ GPG +A Sbjct: 3 ERPTPYSLRVQGGPEHDVNALYLRQAFNDTLSASGTTGHRTMASHAFYGDLLVKLIAVEHLEHRFRVAGETTGGMSDHELLQPYVTRESQAAFFDFVVLQVPQLNNHDFSAHTKADKVEALISYLDLKRGPGLGRHA 139
BLAST of jgi.p|Trimin1|349501 vs. uniprot
Match: A0A835ZIR8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIR8_9STRA) HSP 1 Score: 151 bits (381), Expect = 8.460e-34 Identity = 180/684 (26.32%), Postives = 276/684 (40.35%), Query Frame = 1 Query: 628 CGLVSDAYTQGSGPALLAASRFQSYSPDSVALSTDKNVGGLLADLMITNAVATDKADTSTALTGVAQVDMFLCGDEDCAVMADLMYIAPTSPTPDSGANAITIATAYSRFPNSKAGIGSHYMPDGATATLFNYDKVGSANAAVEPRATDSLGINKYHTQLNRVVWSLPATNLTAAAASIADSSGGGLSSMDRASAGAPAPKQAEQWLEGLPTLTNMGIQTRLFGAESLGNADWSKLRIGTYELGNGDCVNIINFVHEWMNTHGWGTSVVCEGTAAPKRTYIFDSYF----------PQAHLQWPPTSPLNNGDIVFDTVLTAAATGSWYNYGAGPVNTFTYNVAD--KTVDVSPGSLAPTLICDRQDGNSETTGAGSVDCYVSTQHTTAGALGYTGERPWMLPYSNDGDTADTAGKYVVLPLRGDVAAIL-AIDITEPALGHTDALHAGGVARLVAGTIADYDNTAEAGNPVHFTATAALL-----KLGVMANSGNVAGAIYAFIVTIIAIIATYASRKDTAHVLSKA-LPSAVAVALTAMVNIFAVVTPALLLAWSELDARSSNPSGNESTVT--WLDVPAGGYGKYKVVAIVSTSYTAAYNTAAQALMWCNVALACVCGALMVFAIAR-----------QYRAGSFTKGKVAGVIEDVRRP--RSYTHDAPALSGAERSSAS 2577 C LV + + +GS + ASRF ++ + A STD N G+ ADL++ A T + D L+G AQVD+FLCGDE C +ADL Y+ S P+ A T+A Y R P+ G+ + Y+ AT T+ ATD G +K + RVV + +W++ +P+L G R E GN DW ++R G Y G CV ++ H W + GWGT+ CE + +TYIF ++F P+ P +G T A+ P+ Y D +T D + L+ T+ T + S+ T L + PY G T +++V L + + A+ + + G + + H+G A + TA AL +L S VAGA+ AF +T +++IA Y R++ +K L A A+ V +FA+VT + +E AR+SNP G + W A G G YKVV +++ +Y + Y+ A AL W N+A+A +C + + AR R+GS + E RP + +DAPA A+ A+ Sbjct: 2 CTLV-EGFPEGSAADMWMASRFTDFTGNGTAWSTDPNFAGVAADLVMDFAAETARLDARKRLSGTAQVDLFLCGDEPCNTVADLAYVLSASD-PEGQA---TLAFGYQRLPHGLLGVATRYLDPAATRTVLL-------------PATD--GDSKGPRSVGRVV-------------------------------------EFPEWVDNVPSLLAFGPLARTLVVE--GNLDWGRVRAGNYIDSRGVCVTVLTPAHPWFDERGWGTAEDCESS----QTYIFFTFFAPVRASARNHPECRQLPPRVRRCRSGPPPHVTAALASL----------PLRLQAYLDMDHFETADDAGLVLSSTI-----------TSSSSL-----TLWQRYAVLYDAVPLEDVSPYGWRGATWGDQARFMVTDLYCTTSNLFNAVGASANSTGCSPSHHSGIDA-------------------ITLTAQTALQSSVQGQLATADFSLTVAGALIAFSLTTVSLIAGYLGRRELVRFFAKCRLGVTAAKAMAVAVTMFALVTYPATIIIAEEGARASNPDGGAGSAGTFWFAGDASGGGYYKVVGVMTVAYASVYSRTAYALAWINLAVAVICATAICVSAARLPFVTEAQGPLPRRSGSALLTEAVSCGEPKERPPWAAAEYDAPAADEADGDRAA 577
BLAST of jgi.p|Trimin1|349501 vs. uniprot
Match: A0A835YZN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN9_9STRA) HSP 1 Score: 152 bits (384), Expect = 8.770e-34 Identity = 136/452 (30.09%), Postives = 192/452 (42.48%), Query Frame = 1 Query: 586 MCGQAITSGQAVGACGLVSDAYTQGSGPALLAASRFQSYSPDSV---ALSTDKNVGGLLADLMITNAVATDKADTSTALTGVAQVDMFLCGDEDCAVMADLMYIAPTSPTPDSGANAITIATAYSRFPNSKAGIGSHYMPDGATATLFNYDKVGSAN-AAVEPRATDSLGINKYHTQLNRVVWSLPATNLTAAAASIADSSGGGLSSMDRASAGAPAPKQAEQWLEGLPTLTNMGIQTRLFGAESLGNADWSKLRIGTYELGNGDCVNIINFVHEWMNTHGWGTSVVCEGTAAPKRTYIFDSYFPQAHLQWPPTSPLN--------NGDIV-FDTVLTAAATGSWYNYGAGPVNTFTYNVADKTVDVSPGSLAPTLICD-RQDGNSETTGAGSVDCYVSTQHTTAGALGYTGERPWMLPYSNDGDTADTAGKYVVLPLRGDVAAILAIDITE 1899 +C AIT+GQAVG C + D S LLAA RF +P + A ST+ ++ G LAD ++ T + ++S L G AQ+D+FLC D C V+ADL++I TPD ++ T+A Y+R P + G+ ++ AT L + S A + AT V+W++ QW++ P + + G R G N ++ +LRIG YE G+CV II FVH WM+ GW + C G A RTY+FDSYFPQA+L WPP N N ++ F+ AAA G P T N D TL CD N + T A + +CY + + W + +G +V PL A+ILA DI+E Sbjct: 1530 LCQDAITTGQAVGMCAMAGDKLYLKSAADLLAAVRFVESAPPQIGDTATSTEPHMRGFLADYTLSQEQDTKRFNSSKRLKGSAQLDLFLCSDPSCDVVADLVHI----DTPDQDSS-YTLAFGYTRIPGTLMGLPGKHIK--ATDALTSRSIADSGKIAGLADGAT--------------VIWTM----------------------------------DDPQWVDATPVMLSYGAAVRFIGMADAKNWNFERLRIGNYETRAGECVTIITFVHPWMDEQGWRRASACVGAA---RTYVFDSYFPQANLLWPPAQLANAAVSDSYANFEVANFNIAARAAALGQ------APPGANTSNETDNVY-----MYGRTLQCDWTMYTNGQATPADTNNCYAAGHN-------------WGVQIEAEG---------IVTPLVIGNASILAWDISE 1890
BLAST of jgi.p|Trimin1|349501 vs. uniprot
Match: A0A836CAV9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV9_9STRA) HSP 1 Score: 142 bits (358), Expect = 4.630e-31 Identity = 104/305 (34.10%), Postives = 143/305 (46.89%), Query Frame = 1 Query: 589 CGQAITSGQAVGACGLVSDAYTQGSGPALLAASRFQSYSPDSVALSTDKNVGGLLADLMITNAVATDKADTSTALTGVAQVDMFLCGDEDCAVMADLMYIAPTSPTPDSGANAITIATAYSRFPNSKAGIGS-HYMPDGATATLFNYDKVGSANAAVEPRATDSLGINKYHTQLNRVVWSLPATNLTAAAASIADSSGGGLSSMDRASAGAPAPKQAEQWLEGLPTLTNMGIQTRLFGAESLG-NADWSKLRIGTY-ELGNGDCVNIINFVHEWMNTHGWGTSVVCEGTAAPKRTYIFDSYFPQA 1494 C AI +GQA G C LVS+ Y G+G LL A+RFQS++ A STD NVGG+LAD +T A + + D +L G AQVD+FLC D DC V+AD++++ T P+ T+A Y+RF +S + + H D T +F P A G+ + ++V W+L AD+S +W+ + G R + D LR G Y E GDCV +I+F H WM+ GWGTS G A + Y+FDSYF QA Sbjct: 48 CADAIETGQAAGTCNLVSEGYPLGAGADLLMAARFQSFAAAGGAASTDHNVGGVLADYELTVARSNARLDAQRSLRGTAQVDLFLCSDGDCNVIADVVHVV-TEGKPNG-----TLAMGYARFAHSLVALPAYHIRADSVTPRVF-------------PVAESRRGVAR-----SKVAWAL------------ADASA--------------------EWVSANMVMMPFGALVRFLALSARSAELDLGVLRAGAYTEQQTGDCVIVISFKHPWMDAMGWGTSNCDPGDPAAAKVYVFDSYFAQA 296
BLAST of jgi.p|Trimin1|349501 vs. uniprot
Match: A0A835ZD65_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD65_9STRA) HSP 1 Score: 141 bits (355), Expect = 9.520e-31 Identity = 176/693 (25.40%), Postives = 257/693 (37.09%), Query Frame = 1 Query: 649 YTQGSGPALLAASRFQSYSPDSVAL-----STDKNVGGLLADLMITNAVATDKADTSTALTGVAQVDMFLCGDEDCAVMADLMYIA--PTSPTPDSGANAITIATAYSRFPNSKAGIGSHYMPDGATATLFNYDKVGSANAAVEPRATDSLGINKYHTQLNRVVWSLPATNLTAAAASIADSSGGGLSSMDRASAGAPAPKQAEQWLEGLPTLTNMGIQTRLFGAESLGNAD-------------------WSKLRIGTYELGNGDCVNIINFVHEWMNTHGWGTSVVCEGTAAPKRTYIFDSYFPQAHLQWPPTSPLNNGDIVFDTVLTAAATGSWYNYGAGPVNTFTYNVADKTVDVSPGSLAPTLICDR-QDGNSETTGAGSVDCYVSTQHTTAGALGYTGERPWMLPYSNDGDTADTAGKYVVLPLRGDV--------AAILAIDITEPALGHTDALHAGGVARL--------------VAGTIADYDNTAEAG-----------------NPVHFTATAALL-----------------------------------------KLGVMANSGNVAGAIYAFIVTIIAIIATYASRKDTAHVLSKA-LPSAVAVALTAMVNIFAVVTPALLLAWSELDARSSNPSGNESTVTWLDVPAGGYGKYKVVAIVSTSYTAAYNTAAQALMWCN 2403 Y GS LL A+RFQ PD L +TD+NV +AD +T + D + G A +D+FLC D +C V+ADL+Y+A P T +T A Y RF + G+ ++ D +T N + P A + +V W+ QW+E P L + G R+ GN+ ++ LRIG Y + +CV+II F H+WM+ GW TS C + +IFDSYF QA+L WPP LN D+ A + GAG N VS S TL CD N +T AGS C ++ GA Y +P Y+ D + + P R AAI A ++TE L +++ G R+ + G+ + + A G P+ + A LL +L S AGA T++A++ATY R + +A LP A LT +V F ++TP L+ +E AR++ G+ STV W++ A G G+Y+VV VS + A ++ A L+W N Sbjct: 4 YPLGSAADLLFAARFQK--PDDPGLLGSWPTTDRNVRAFMADYTLTLTQEQSRLDAYKQIKGTADLDIFLCSDLECTVVADLIYLAHGPRYAT-------VTPAMGYVRFDTTVIGLPMQFIQDSSTM-----------NPVIVPIAESDASATP---SMAQVAWTF----------------------------------DDPQWVEADPILVSFGAMVRMIALS--GNSTEATIVHMVDTLSRNRMVDLFNSLRIGNYMTSDRECVSIITFKHDWMDQQGWDTSHNC----ISESLFIFDSYFTQANLHWPPALELN------DSTKPAEKLSVFTPLGAGAGNW-------DNAAVSVASYGRTLFCDAAMFRNVQTVAAGSSSCSIAD-----GA--YAAAQPESSEYAKAQRKGDHDAQQLGGPPRPSPPVALIIGNAAISAWNVTEDRLLQPESVKVDGGLRMEPYDYMTTDGGHNPMRGSAVEGSSVANVGPAEALLRLALGWGPVGAGPLPAVSGAELLSRMRVSWVDMTYGRPFGSSILSGINTTRASAQTVLSDVVAAELATTDTSYTRAGAFLLLSQTLVALLATYLGRHELVFFFRRARLPVCAAQLLTVVVFAFTIITPPALVLVAEGSARATGADGSSSTVRWVEGQAYGSGEYRVVGAVSVTLNAQHSQVANGLIWLN 613
BLAST of jgi.p|Trimin1|349501 vs. uniprot
Match: A0A836CCW8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCW8_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.160e-29 Identity = 96/332 (28.92%), Postives = 149/332 (44.88%), Query Frame = 1 Query: 586 MCGQAITSGQAVGACGLVSDAYTQGSGPALLAASRFQSYSPDSVALSTDKNVGGLLADLMITNAVATDKADTSTALTGVAQVDMFLCGDEDCAVMADLMYIAPTSPTPDSGANAITIATAYSRFPNSKAGIGSHYMPDGATATLFNYDKVGSANAAVEPRATDSLGINKYHTQLNRVVWSLPATNLTAAAASIADSSGGGLSSMDRASAGAPAPKQAEQWLEGLPTLTNMGIQTRLFGAESLGNADWSKLRIGTYELGNGDCVNIINFVHEWMNTHGWGTSVVCEGTAAPKRTYIFDSYFPQAHLQWPPTSPLNNGDIVFDTVLTAAATGSW 1581 +C + +G G C L+ + QGS LL ASRF ++ + STD N GG++AD+++ + T + D LTG AQVD+F+CGDE C +ADL Y+ P S PD+ T+A Y R PN G+ + Y+ T ++ + SA A PRA + V W++ ++ W+ +P+L + G R + GN +W ++R G Y G CV + H W+N GWGT+ CE + TYIF+++F A+L ++ I + T + + SW Sbjct: 67 LCVIGVQTGVQSGMCTLIGG-FPQGSAADLLMASRFDDFNGNGTVWSTDNNFGGVMADMVLDFSAETSRLDARKRLTGTAQVDLFICGDEPCNTVADLAYVLPASE-PDAPP---TLAYGYQRLPNGLLGVPTRYVVPAETQSVL----LPSA-AEAGPRAPRT------------VAWAI----------------------------------ESPHWVGNVPSLLSFGAFARTLSID--GNLNWGRVRAGNYVDSRGVCVTLFTPAHPWLNARGWGTTEDCESS----ETYIFETFFAPAYLDLDHFRSADDAGIHLPSSTTDSPSSSW 336 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349501 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9139 ID=mRNA_9139|Name=jgi.p|Trimin1|349501|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2673bp|location=Sequence derived from alignment at Contig_44:890909..897521- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCAGATGCGGAGAGAGCGCAACCCTCCGTACAGCCTGCGCCGCGATGGback to top protein sequence of jgi.p|Trimin1|349501 >Trimin1|349501|estExt_Genemark1.C_Ctg_440070 ID=Trimin1|349501|estExt_Genemark1.C_Ctg_440070|Name=jgi.p|Trimin1|349501|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=891bp MQMRRERNPPYSLRRDGAPEQDLNPSFLRGAFSLLLKLSARPGRRSLAHHback to top mRNA from alignment at Contig_44:890909..897521- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9139 ID=mRNA_9139|Name=jgi.p|Trimin1|349501|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6613bp|location=Sequence derived from alignment at Contig_44:890909..897521- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_44:890909..897521- >mRNA_9139 ID=mRNA_9139|Name=jgi.p|Trimin1|349501|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2673bp|location=Sequence derived from alignment at Contig_44:890909..897521- (Tribonema minus UTEX_B_3156 )back to top |