mRNA_8703 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|81206
Unique Name	mRNA_8703
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|81206 vs. uniprot
Match: A0A835YRG3_9STRA (Voltage dependent anion channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG3_9STRA)

HSP 1 Score: 534 bits (1376), Expect = 3.580e-191
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1

Query:   52 MSPPPFYKDLTKAVSDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEFVGARMALKTEVNTELTKITSSATAAYDGVNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKDMQPKFGFNCTLG 873
            MSPPPFYKDLTKAVSDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEFVGARMALKTEVNTELTKITSSATAAYDGVNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKDMQPKFGFNCTLG
Sbjct:    1 MSPPPFYKDLTKAVSDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEFVGARMALKTEVNTELTKITSSATAAYDGVNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKDMQPKFGFNCTLG 274

[Close]

BLAST of jgi.p|Trimin1|81206 vs. uniprot
Match: A0A835YZM2_9STRA (Voltage dependent anion channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZM2_9STRA)

HSP 1 Score: 406 bits (1044), Expect = 1.260e-140
Identity = 200/271 (73.80%), Postives = 237/271 (87.45%), Query Frame = 1

Query:   61 PPFYKDLTKAVSDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEFVGARMALKTEVNTELTKITSSATAAYDGVNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKDMQPKFGFNCTLG 873
            PPFYKDLTK V+DLLTDD+SLK T+K+KHTTPH V FT ENEHKG S VAGK+QLKYAHKPSGF+LDKV +  +G  +VECSLAG+A GLKLTAK++DAIKGDVG E+VGA  A+KT+++ E TK+ +SATAAY+GVNAGGI+ AKLPGDKPAALSDYNAG++YGGTGWFTALTT+NKMATYN+SA+YAPA N+T  VLAS TPE+GAQ+V VG KY CNP T LRAK TS+GM+HAA+Q+KC +G+ +G ATE+N KDMQPKFGFNCTLG
Sbjct:    4 PPFYKDLTKVVNDLLTDDFSLKRTVKVKHTTPHNVNFTIENEHKG-SAVAGKVQLKYAHKPSGFALDKVTIAQNGAKTVECSLAGLAPGLKLTAKVDDAIKGDVGAEYVGAGFAIKTDMDVEATKMVTSATAAYEGVNAGGIISAKLPGDKPAALSDYNAGVAYGGTGWFTALTTTNKMATYNLSATYAPAKNVTAVVLASLTPETGAQSVVVGTKYVCNPNTTLRAKATSDGMLHAAVQHKCTQGLIIGAATEVNAKDMQPKFGFNCTLG 273

[Close]

BLAST of jgi.p|Trimin1|81206 vs. uniprot
Match: D8LG27_ECTSI (Voltage dependent anion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG27_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 7.170e-60
Identity = 114/272 (41.91%), Postives = 155/272 (56.99%), Query Frame = 1

Query:   67 FYKDLTKAVSDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEFVGARMALKTEVNTELTKITSSATAAYDG---VNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKDMQPKFGFNCTLG 873
            FY DL K   D+L+DDY+LK TLK+KHTTPH V  TA++EH  + GV G L+ K+ H  SG S+DK  L PDG   +E S   VA+ +KL AK+ND +KG+V  E    + + +  ++ E   + +S   A      V A G  I   P  K +AL  Y+ G + GG+ W  +LT +N M T+N S  Y    NL  +V+A TTPE    +   G++YQCNP T +RAKM S G+V A   N+C + V++ V       D  PKFG  C LG
Sbjct:   53 FYNDLNKVARDILSDDYNLKRTLKMKHTTPHGVTVTAKSEH--SKGVNGALEAKFFHAKSGVSIDKAKLNPDGSMGLEASRRDVAKNVKLVAKVNDVLKGEVSMEHTVGKSSSRATLDVEGNWMRTSTCMAVGSSLLVGAQGDFIVGAP--KDSALKSYSVGAATGGSRWGASLTCTNAMQTFNASGYYILQPNLVGSVMAVTTPEKSETSFEAGVRYQCNPKTTVRAKMNSNGLVQACAVNRCADKVAITVTAAAAKNDTTPKFGLLCALG 320

[Close]

BLAST of jgi.p|Trimin1|81206 vs. uniprot
Match: A0A6H5L9E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9E4_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 1.520e-48
Identity = 99/248 (39.92%), Postives = 137/248 (55.24%), Query Frame = 1

Query:  139 LKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEFVGARMALKTEVNTELTKITSSATAAYDG---VNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKDMQPKFGFNCTLG 873
            +KHTTPH V  TA++EH  + GV G L+ K+ H  SG S+DK  L PDG   +E S   +A+ +KL AK+ND +KG+V  E    + + +  ++ E   + +S   A      V A G  I   P  K +AL  Y+ G + GG+ W  +LT +N M TYN S  Y    NL  +V+A TTPE    +   G++YQCNP T +RAK+ S G+V A   N+C + V+V V       D  PKFG  C LG
Sbjct:    1 MKHTTPHGVTVTAKSEH--SKGVNGALEAKFFHAKSGVSIDKAKLNPDGSMGLEASRRDIAKNVKLVAKVNDVLKGEVSMEHTVGKSSTRATLDVEGNWMRTSTCMAVGSSLLVGAQGDFIVGAP--KDSALKSYSVGAATGGSRWGASLTCTNAMQTYNASGFYILQPNLVGSVMAVTTPEKSETSFEAGVRYQCNPKTTVRAKVNSNGLVQACAVNRCADKVAVTVTAAAAKNDTTPKFGLLCALG 244

[Close]

BLAST of jgi.p|Trimin1|81206 vs. uniprot
Match: A0A1Z5KDV9_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KDV9_FISSO)

HSP 1 Score: 98.6 bits (244), Expect = 3.570e-20
Identity = 86/271 (31.73%), Postives = 139/271 (51.29%), Query Frame = 1

Query:   61 PPFYKDLTKAVSDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEF-VGARMALKTEVNTELTKITSSATAAY-DGVNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKD---MQPKFGF 858
            P  + D+ K V D+L DDY+ K +LK K +    VA T E E      +A K+  K+++    F++DK  L  DGG+++E S+  +   +KL+ K +     D+G ++ +G+  A        ++K+++SA  A   G+  GG  +  L G K   L+ +N G SY     FT+L  S+K +TY+VS  Y    +LT A L + + E+    V VG  Y+     +L+AK+ S+G+VHA +       VS+  +  M   D    +P FG 
Sbjct:   51 PTKFADIDKPVKDILNDDYTSKVSLKCK-SNAGPVAVTIETERGATGALASKIGTKFSYAK--FNVDKGQLTADGGSALETSMK-LTPDIKLSFKTSKG--ADLGIDYTLGSFYATGVLDVQNMSKVSTSACYALPSGLKVGGDAVYSLSG-KTTGLAGFNVGASYAKGPIFTSLV-SSKFSTYSVSVGYNVNQDLTIASLTTHSAENRCNLVGVGASYKNPVIGMLKAKVGSDGVVHACLVKDIAPKVSLTASGSMLATDPSTFKPGFGI 313

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|81206 vs. uniprot

BLAST of jgi.p|Trimin1|81206 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A835YRG3_9STRA	3.580e-191	100.00	Voltage dependent anion channel n=1 Tax=Tribonema ...	[more]
A0A835YZM2_9STRA	1.260e-140	73.80	Voltage dependent anion channel n=1 Tax=Tribonema ...	[more]
D8LG27_ECTSI	7.170e-60	41.91	Voltage dependent anion channel n=1 Tax=Ectocarpus...	[more]
A0A6H5L9E4_9PHAE	1.520e-48	39.92	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A1Z5KDV9_FISSO	3.570e-20	31.73	Uncharacterized protein n=2 Tax=Fistulifera solari...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_61	contig	Contig_61:403095..409218 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|81206\|CE81205_418
KEGG TC	1.B.8.1
BRITE	ko00000,ko00001,ko02000,ko03029
KEGG Pathway	ko04020,ko04022,ko04216,ko04217,ko04218,ko04621,ko04979,ko05012,ko05016,ko05166,map04020,map04022,map04216,map04217,map04218,map04621,map04979,map05012,map05016,map05166
KEGG ko	ko:K15040
Description	Eukaryotic porin
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2D161@1\|root,2SGUK@2759\|Eukaryota
Evalue	4.67e-61
Seed ortholog	2880.D8LG27
Hectar predicted targeting category	other localisation
TranscriptId	81528
Track	FilteredModels1
ProteinId	81206

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|81206	gene_8703	Tribonema minus UTEX_B_3156	gene	Contig_61 403095..409218 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|81206	Trimin1\|81206\|CE81205_418	Tribonema minus UTEX_B_3156	polypeptide	Contig_61 403146..409183 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_8703_1	exon_8703_1	Tribonema minus UTEX_B_3156	exon	Contig_61 403095..403148 +
exon_8703_2	exon_8703_2	Tribonema minus UTEX_B_3156	exon	Contig_61 403491..403533 +
exon_8703_3	exon_8703_3	Tribonema minus UTEX_B_3156	exon	Contig_61 404258..404505 +
exon_8703_4	exon_8703_4	Tribonema minus UTEX_B_3156	exon	Contig_61 407183..407328 +
exon_8703_5	exon_8703_5	Tribonema minus UTEX_B_3156	exon	Contig_61 407940..408233 +
exon_8703_6	exon_8703_6	Tribonema minus UTEX_B_3156	exon	Contig_61 409093..409218 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_8703	UTR5_8703	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_61 403095..403145 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_8703	CDS_8703	Tribonema minus UTEX_B_3156	CDS	Contig_61 403146..403148 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_8703	UTR3_8703	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_61 409184..409218 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_61:403095..409218+
coding sequence from alignment at Contig_61:403095..409218+

spliced messenger RNA

>mRNA_8703 ID=mRNA_8703|Name=jgi.p|Trimin1|81206|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=911bp|location=Sequence derived from alignment at Contig_61:403095..409218+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCGAAGGCGAGAGCTTTAGATCAGCAAGTCAGAGACACGCCAGCATCCGC
CATGTCTCCTCCTCCGTTTTACAAGGATCTCACCAAAGCCGTCTCAGACC
TCCTGACGGACGACTACAGCTTGAAGAACACGCTCAAGCTCAAGCACACG
ACACCCCACGCGGTCGCGTTCACCGCGGAGAACGAGCACAAGGGCGCCAG
CGGCGTGGCGGGCAAGCTCCAGTTGAAGTACGCACACAAGCCCTCGGGGT
TCTCGCTGGATAAGGTGGTGCTCGGCCCCGATGGCGGCACCAGTGTGGAG
TGCTCTCTGGCGGGGGTGGCGGAGGGGCTCAAGCTCACTGCCAAGATCAA
CGACGCCATCAAGGGCGATGTCGGCACGGAGTTTGTAGGCGCGCGCATGG
CCCTCAAGACGGAGGTCAACACGGAGCTCACCAAGATCACGTCCTCCGCC
ACGGCCGCATACGACGGTGTCAACGCTGGTGGCATTGTCATCGCAAAGCT
GCCAGGCGACAAGCCCGCAGCGCTCAGCGACTACAACGCGGGCCTCTCGT
ACGGCGGCACGGGCTGGTTCACGGCCCTCACAACCTCCAACAAGATGGCC
ACGTACAACGTCAGCGCGAGCTACGCGCCCGCCGCCAACCTCACGACTGC
GGTGCTCGCGTCTACCACGCCCGAGAGCGGCGCGCAGACGGTTACTGTGG
GGTTGAAGTACCAGTGCAACCCCGCGACGGTGCTGCGCGCCAAGATGACC
AGCGAGGGCATGGTGCACGCCGCCATGCAGAACAAGTGCTGCGAAGGCGT
CAGCGTCGGCGTCGCCACAGAGATGAACACCAAGGACATGCAGCCCAAGT
TTGGCTTCAACTGCACGCTGGGATAGACACACTGCACCATCGCCGCCCCA
CACGCGTGCTT

protein sequence of jgi.p|Trimin1|81206

>Trimin1|81206|CE81205_418 ID=Trimin1|81206|CE81205_418|Name=jgi.p|Trimin1|81206|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=275bp
MSPPPFYKDLTKAVSDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGAS
GVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKIN
DAIKGDVGTEFVGARMALKTEVNTELTKITSSATAAYDGVNAGGIVIAKL
PGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTA
VLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGV
SVGVATEMNTKDMQPKFGFNCTLG*

mRNA from alignment at Contig_61:403095..409218+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_8703 ID=mRNA_8703|Name=jgi.p|Trimin1|81206|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6124bp|location=Sequence derived from alignment at Contig_61:403095..409218+ (Tribonema minus UTEX_B_3156 )
GCGAAGGCGAGAGCTTTAGATCAGCAAGTCAGAGACACGCCAGCATCCGC
CATGGTGAGTAGAACGACGAGACGTTTGCGCACATGCCTGCTGCATCATC
GCATGTGTGCCGCGCATCTTCATGCGTGGTTCCCTTCAAGTTGCCTCGAG
CTTTACGGCGACCGTGTACATTTGTCATGCTGACTCCCGCCGGCACTGTT
TGCGCTTTCATGCTGTAGTAGAGACCCATATAGCCTTGATGTGGCCGCAG
CACTGCGGCGATCGCTATGTTCACGTCCCTACCTTGGCATTTGAACCAAT
CGCCGTCCTGAGCTTATCAGTTCAGGTGCGGTATCATGTTAATTGTCCTC
CGCTGCCTTTGGCGCTGCTGCCTGTCCTACGGCGTGACCATCACAGTCTC
CTCCTCCGTTTTACAAGGATCTCACCAAAGCCGTCTCAGGTAAACAGTGT
GTGCACGAACTCGTCATCCTTGTCGGCGTTAAGTGCGCAGCTTGATTCAT
TCTGGGTTTAGGCAGTGTAATGCCAGGTAAGCAGCGCTCTGTGCATTTGT
ATTGTTACCGTCACTAGCAATGTGACATTCAGACTTGCTGCTATTTTGGG
GAAAGCTACTCGGTCTCCGTGCCTCGGCCTGCGTGTGTGCGAATGCGAGC
TGTCGTGACGAGCACGCGGAAGCTGGCACTGCGTGAGGCAGATCACCAAC
CAAACATTTGATGGCTAGCTGACTCAGACGGGCTGCTGGCCTGCACGTGT
TCTATCTTATGAATTGTTGCATGAATGGTGTGCGTTTGCTCTCGCACCAC
GCTGCACTTCTTACTGCTGCAATAGCATCATCAAGATCGTCCCGCTTGCC
TATGTCAAATGATATATCTTTTGTAGGCTGTTATTGACCGGTTGTCTTTC
TATTATTTATCAGTGATTTTTCGCAAAGAAGGTGCTGTTTCGGGCCTTAG
TTGCTCCATTTGCTGTTGGCTCTCCAGGCATTATTCTTGGTTTTCAAGGT
TGTGGTAGGGATCGAGAGTGCCCCGACAGGGAAAAGTTGCAGCCTCAACA
ACACGCTCACGCTGCCCGCCAGCACCATTTCTTCCTTCTTCAACTTCAGA
GTATGACACCAGAACTTCACCTCCTGTCACTGTCTCCACCCCCATGATGC
CGCCTATCCGCAGACCTCCTGACGGACGACTACAGCTTGAAGAACACGCT
CAAGCTCAAGCACACGACACCCCACGCGGTCGCGTTCACCGCGGAGAACG
AGCACAAGGGCGCCAGCGGCGTGGCGGGCAAGCTCCAGTTGAAGTACGCA
CACAAGCCCTCGGGGTTCTCGCTGGATAAGGTGGTGCTCGGCCCCGATGG
CGGCACCAGTGTGGAGTGCTCTCTGGCGGGGGTGGCGGAGGGGCTCAAGC
TCACTGCCAAGGTGAGTTCGATACTTCAAGTACTTGAAGTGGTGTATTTT
CATGGGTTGTCGCTCGGCAGCGAGCGTGGAGTGCTCTCTGGCGGGGGTGG
CAGAGGGGCTCAAGCTCACTGCCAAGGTGAATACTTCAAGTACTTGAAGT
TGGTGTTGATTTTATGGAGTTGTCGCTCAGCAGCGCGCGGAAACATTCAA
ACGATCGGCGCCAAACCTGCTACCAGGTTTGTCTACCCCTTGTCAGATAA
TGATACACGGTTGCACTGTGCCTCGCTAGCGGGGGTTGGGTTGTGAAGTG
GCTCAAGCTCGCTGCCAAAGCTGAGTACTGCAAGTGCTTGAAGTGGTGCA
CTTGGCAGAATTCGCGTCATTGGACTGCAGAAGTAATGCGACGTAAGGAA
ATTAGGGCGTAATGCGTACATAATCAGTGGCGGAGGGGCTCGCTCCATGC
AAAAGGAAATACTTGAGGTGGCGTGCTGTGCGGAAAACGGGACCACTTGA
AGTGTGAAATTTGGACCGAAGTCGTGTGTTTCAAAGCATCTGCACGAATG
TAGGTTTGCGCATACTTTGAAGTTCGCGCTTCGGAGTATGTCACAGTACT
TCAACGTCGTAAGCAGTCATTGTGTGAGTGTAGCATGTAGATACATGCTG
CTGGGCTGTGAACGCGCGCGCGCCCTTGCGCAGCAGTGCACAGCAGCAGC
AGCGCTCAGACGACATCACTACATCACACGCGTTTGCATACTTCAACTAC
ACAAGTTGGCGCTGATCTCAAAAAAGCGTGGTGCCGCAGTGGCCACATCA
GCATGAGTGCATGGCTTGTATTCGAATGTACCAGTTTGGTGCCCACCTTC
AAGTGGTGACGCTCACTGCCTCAAGTTGATGAACGCTGCCTTGACACTTG
CGCCGCCTGATGGCTAATAATAATGGTGGGCCTTTGGCGTGGTGCTTGTG
GCTTGAATGAGAGATTGGAGTCGCTGCCATTGCCCCTCGATACAGTAAGT
ATGTAACTGTAAGTGCTATTAGTGTGGCAATCTGAGAAGACGCAGAAGAT
CACAGCGTATTATGTAACAAGTGCTGTCGGTGTCGCAATTTGAGAAGATT
ACAGCAAATTATGTACTTGTAAGTGCTGTTTGTGTGGCAATCTGAGAAGA
TCCAGAACATCAAAACAGTTAGAATGAATACTAAACTTCAATTGTGTAGT
CAACATTTGGCGTTGCCACAGGCTCACAGCAACGGCAGACAAGAACGGAA
GTACAGAGCGGGCCTGGTTTACAAGTTTCTGCAGGGCCCAGTGCAAGGGC
TTAAAGTGTCTGCCAAGGTGACTGCAGCATCTGCGGAGCCTCGGGCTTTG
CGTTGCTTGCAATTTCTCTAGGTCACCGCTGAGGGTCAGGTTATGTAGGG
TTAGGATTAGTGGGTAAGTAGTTTATGATCCTAAAGCTCTCAGGATGTAG
CACAGCTGCACTTGCCGCAGTTCAACCACCGTGCCTCAAACTCCGCTCGA
TTGTAGTGTTGGCTCAGCCCCCAGCATCGACTTGTCATTAGGATTAGGGT
TGAATTTAGTGTCACAAGCGGATGTAGTGATAGCAGACGTGCGCACGTGA
CATGGAACTTGAAGGCATGCAACTCTGAAAGTACGCACCTCGCGTACACC
TTGAGTACACTTTGGGTACACCTTGAACACACCACTTTGGCTGCAACACG
CTCGCACAGAATTGGCAAACAGTACTGCCAAACACACACTTGCTGCTGTG
TGTACTCTCAACCGTTGTGATACCGCTAGCCTTGTGACCTGCCCATGGAT
GTCTAATGCTGTGGGCAATGCGCATGTAGGTGTACGCCTGGGATGCATTG
TCGGTACGCATGGGGCTCGCCCTGTTGATCATCACCACCACCGCTTTACG
ACTACAGTGGGGTTCGAGTTAACATCATTTTAGGGTCAGGTCACCCTGGC
CCCCAGCCCTCGCGTTCTTTGGAGGTGTCAGGCAGATGCCATCTCTGTCG
CGCTGATCAACGTGCATCCCTCCAATGCCAGCAAGGACAATGTCGGCGTA
GAGTTTGTTGTTTGCGAGGCAACCAACCTGACCCTACCTTAAACCCCCAG
CTAACCCTAACCTCGCTCACCGACGACAAACATGTTCATTGCTGTATTCC
GCACTCGCCATACCCCTCATTTGCGAACGGATGACGTCGTCAACTTTGTA
TGTTCAACCGCATGCAGTTCAATGGTGCCATCAAGGGCGGTGTTGGCACA
GAGCGGTAGGGGTTAAAGTTGACCCAACCGCAGCCCTTTACACCACGCCT
TCAGAACAACTGATGACATGTTTCACGCGTTGCCATCTTCAACGCTGTGA
TTTCAGGTTAAACCAATTCCTGACCGTACCTTCTACCCTAACCTACCCTA
CCCTCATTCACAAATGACAGTATGTTCGTTGCTGTGTGTTTCCAACTTGC
GGTACCCCTCATTCACAAACTTCAACTCTGTATTATCAACTCTGTCTCTT
CAACTTTGTACCTACTCCGGCGCGCAGATCAACGATGCTCAACATCGCTG
TCTTCAACGATGTGTTTGATTTGAGTTTGTAGGTAGTAGAAAGTTAGCAG
GACTTGAAGTTGACCCACCTCCTTTTGGAGACACCGATGATAACTTTAAC
TTTGCTATTTTCAACTTTGCATCTTCAACTGCATGCAGATCAACGACGCC
ATCAAGGGCGATGTCGGCACGGAGTTTGTAGGCGCGCGCATGGCCCTCAA
GACGGAGGTCAACACGGAGCTCACCAAGATCACGTCCTCCGCCACGGCCG
CATACGACGGTGTCAACGCTGGTGGCATTGTCATGTGAGCACACGCCTAG
ATATCTACGTATGAGTAGTTCTTTGCTACAACGATGCGCCTGTGATGCCG
GCGGCATTGTCACGTGAGCACACGCCTACGCATCTACTCAGGATGCCTTC
AATGTCAGTGGCATTGTCATAAGCGCACACGCCTAGGCATCTGCAAGGTT
TTATGCTACAGCATAGTTACGGTGGCGTCAACGCCTGCGGCATTGTCATG
CGACATCCAACGACGCCAAGCTCCCGGGCGGCAGCCCCGCAGCTCTCAGC
GACTACAACGTCGCAGCACACATACTGGCCTTACAGACACTGCCTTCACC
TTCATCTCCCATCGCGTCACCATAAACACTTAATGGATGAGTCTCATTCG
CTGCTGCCTCACCCGCTGCGCTGCTGCCAAACAGCGCCAAGGTCCCCGGC
GACAAGCCAGCAGCCCTCAGCGACTACAGCCATAGTATATGCGCATTTGC
CTTGCACACACCGCCTTCGCCTCGACCGCTTGCCATCACGCCAACAGCAC
CGAACACTCACAGGAAGACCCATACTTAGGGTGAGGAGTCGAGTCTTACT
TTGTTGCTGCCTCATGCGCCACCACTGCGCTGCGGTGTCAAACAGCGCAA
AGCTGCCAGGCGACAAGCCCGCAGCGCTCAGCGACTACAACGCGGGCCTC
TCGTACGGCGGCACGGGCTGGTTCACGGCCCTCACAACCTCCAACAAGAT
GGCCACGTACAACGTCAGCGCGAGCTACGCGCCCGCCGCCAACCTCACGA
CTGCGGTGCTCGCGTCTACCACGCCCGAGAGCGGCGCGCAGACGGTTACT
GTGGGGTTGAAGTACCAGTGCAACCCCGCGACGGTGCTGCGCGCCAAGAT
GACCAGCGAGGGCATGGTGCACGCCGCCATGCAGAACAAGTGAGTGCAGG
ATACTTGAAGTACTTGAACTTCAACTTTTTGGGTCACATCTTGCGATTGA
TTGGTCATATATCTAGAAGCATCAGGCCCAAATGACCAGCGAGGGCATGG
TGCACGCCGCCATGCAGAATAAGTGAGTGTACTTTGAATTATGATACCTG
GGCTTCATTGTTTTGGGTTACCATCTCTTCGATCATTTGGTCATGCCGAG
AGCGGCGCGCGGTGCGTCACCGTCAGTTGAAGTACCAGTGCAACCCCGCG
ACGGTGCTGCGCGCTAAGATGACCAGCGAGGGCATGGTGCACGCCGCCAT
GCAGAACAAGTGAGTGCAGGATACCTGAAGTACTTGAACTTCAACTTTTT
GGGTCACATCTTGCGATTGATTGGTCATATATCTAGAAGCATCAGGCCCA
AATGACCAGCGAGGGCATGGCGCACGCCGCCATGCAGAACAAGAGAGTGT
ACTTTGTAGTATGATACCCGGACTTCATTGTTTGGGTCGATACTGTCAAT
TGGTTCGTCATATACAAGAATCATGCCAAGAATCACCAGCGATGGCATGG
CGCACGCCGCCACGCAGAGAAGGTGCTCATTGACAAAAACTTCAACTTCA
TGGGTCATCTCTCCAGCTTTTTTCTGCAAGGCACCACTGTTGGTTGCTTG
GGTCCTGTGGTCGGTGCCATATTTTCCAAGTACCAACGGTACTCTACTAT
GTGCTTGCATGTCCTCAAGATGATAATGTGCGAACGAAGCCCCCAAGCTC
ACGCTGAACACGTTTTCCTGTGCTACCTTATTGTGTGATGCTCAGTTTGA
CACATGCTTTCCTGCGCTACCTACCTACCCCATTGTGGCGATGCTCAGGT
GCTGCGAAGGCGTCAGCGTCGGCGTCGCCACAGAGATGAACACCAAGGAC
ATGCAGCCCAAGTTTGGCTTCAACTGCACGCTGGGATAGACACACTGCAC
CATCGCCGCCCCACACGCGTGCTT

Coding sequence (CDS) from alignment at Contig_61:403095..409218+

>mRNA_8703 ID=mRNA_8703|Name=jgi.p|Trimin1|81206|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=825bp|location=Sequence derived from alignment at Contig_61:403095..409218+ (Tribonema minus UTEX_B_3156 )
ATGTCTCCTCCTCCGTTTTACAAGGATCTCACCAAAGCCGTCTCAGACCT
CCTGACGGACGACTACAGCTTGAAGAACACGCTCAAGCTCAAGCACACGA
CACCCCACGCGGTCGCGTTCACCGCGGAGAACGAGCACAAGGGCGCCAGC
GGCGTGGCGGGCAAGCTCCAGTTGAAGTACGCACACAAGCCCTCGGGGTT
CTCGCTGGATAAGGTGGTGCTCGGCCCCGATGGCGGCACCAGTGTGGAGT
GCTCTCTGGCGGGGGTGGCGGAGGGGCTCAAGCTCACTGCCAAGATCAAC
GACGCCATCAAGGGCGATGTCGGCACGGAGTTTGTAGGCGCGCGCATGGC
CCTCAAGACGGAGGTCAACACGGAGCTCACCAAGATCACGTCCTCCGCCA
CGGCCGCATACGACGGTGTCAACGCTGGTGGCATTGTCATCGCAAAGCTG
CCAGGCGACAAGCCCGCAGCGCTCAGCGACTACAACGCGGGCCTCTCGTA
CGGCGGCACGGGCTGGTTCACGGCCCTCACAACCTCCAACAAGATGGCCA
CGTACAACGTCAGCGCGAGCTACGCGCCCGCCGCCAACCTCACGACTGCG
GTGCTCGCGTCTACCACGCCCGAGAGCGGCGCGCAGACGGTTACTGTGGG
GTTGAAGTACCAGTGCAACCCCGCGACGGTGCTGCGCGCCAAGATGACCA
GCGAGGGCATGGTGCACGCCGCCATGCAGAACAAGTGCTGCGAAGGCGTC
AGCGTCGGCGTCGCCACAGAGATGAACACCAAGGACATGCAGCCCAAGTT
TGGCTTCAACTGCACGCTGGGATAG