Trimin1|81206|CE81205_418 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|81206
Unique NameTrimin1|81206|CE81205_418
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length275
Homology
BLAST of jgi.p|Trimin1|81206 vs. uniprot
Match: A0A835YRG3_9STRA (Voltage dependent anion channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG3_9STRA)

HSP 1 Score: 534 bits (1376), Expect = 1.160e-191
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
Query:    1 MSPPPFYKDLTKAVSDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEFVGARMALKTEVNTELTKITSSATAAYDGVNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKDMQPKFGFNCTLG 274
            MSPPPFYKDLTKAVSDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEFVGARMALKTEVNTELTKITSSATAAYDGVNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKDMQPKFGFNCTLG
Sbjct:    1 MSPPPFYKDLTKAVSDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEFVGARMALKTEVNTELTKITSSATAAYDGVNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKDMQPKFGFNCTLG 274          
BLAST of jgi.p|Trimin1|81206 vs. uniprot
Match: A0A835YZM2_9STRA (Voltage dependent anion channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZM2_9STRA)

HSP 1 Score: 406 bits (1044), Expect = 4.260e-141
Identity = 200/271 (73.80%), Postives = 237/271 (87.45%), Query Frame = 0
Query:    4 PPFYKDLTKAVSDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEFVGARMALKTEVNTELTKITSSATAAYDGVNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKDMQPKFGFNCTLG 274
            PPFYKDLTK V+DLLTDD+SLK T+K+KHTTPH V FT ENEHKG S VAGK+QLKYAHKPSGF+LDKV +  +G  +VECSLAG+A GLKLTAK++DAIKGDVG E+VGA  A+KT+++ E TK+ +SATAAY+GVNAGGI+ AKLPGDKPAALSDYNAG++YGGTGWFTALTT+NKMATYN+SA+YAPA N+T  VLAS TPE+GAQ+V VG KY CNP T LRAK TS+GM+HAA+Q+KC +G+ +G ATE+N KDMQPKFGFNCTLG
Sbjct:    4 PPFYKDLTKVVNDLLTDDFSLKRTVKVKHTTPHNVNFTIENEHKG-SAVAGKVQLKYAHKPSGFALDKVTIAQNGAKTVECSLAGLAPGLKLTAKVDDAIKGDVGAEYVGAGFAIKTDMDVEATKMVTSATAAYEGVNAGGIISAKLPGDKPAALSDYNAGVAYGGTGWFTALTTTNKMATYNLSATYAPAKNVTAVVLASLTPETGAQSVVVGTKYVCNPNTTLRAKATSDGMLHAAVQHKCTQGLIIGAATEVNAKDMQPKFGFNCTLG 273          
BLAST of jgi.p|Trimin1|81206 vs. uniprot
Match: D8LG27_ECTSI (Voltage dependent anion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG27_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 2.850e-60
Identity = 114/272 (41.91%), Postives = 155/272 (56.99%), Query Frame = 0
Query:    6 FYKDLTKAVSDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEFVGARMALKTEVNTELTKITSSATAAYDG---VNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKDMQPKFGFNCTLG 274
            FY DL K   D+L+DDY+LK TLK+KHTTPH V  TA++EH  + GV G L+ K+ H  SG S+DK  L PDG   +E S   VA+ +KL AK+ND +KG+V  E    + + +  ++ E   + +S   A      V A G  I   P  K +AL  Y+ G + GG+ W  +LT +N M T+N S  Y    NL  +V+A TTPE    +   G++YQCNP T +RAKM S G+V A   N+C + V++ V       D  PKFG  C LG
Sbjct:   53 FYNDLNKVARDILSDDYNLKRTLKMKHTTPHGVTVTAKSEH--SKGVNGALEAKFFHAKSGVSIDKAKLNPDGSMGLEASRRDVAKNVKLVAKVNDVLKGEVSMEHTVGKSSSRATLDVEGNWMRTSTCMAVGSSLLVGAQGDFIVGAP--KDSALKSYSVGAATGGSRWGASLTCTNAMQTFNASGYYILQPNLVGSVMAVTTPEKSETSFEAGVRYQCNPKTTVRAKMNSNGLVQACAVNRCADKVAITVTAAAAKNDTTPKFGLLCALG 320          
BLAST of jgi.p|Trimin1|81206 vs. uniprot
Match: A0A6H5L9E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9E4_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 6.430e-49
Identity = 99/248 (39.92%), Postives = 137/248 (55.24%), Query Frame = 0
Query:   30 LKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEFVGARMALKTEVNTELTKITSSATAAYDG---VNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKDMQPKFGFNCTLG 274
            +KHTTPH V  TA++EH  + GV G L+ K+ H  SG S+DK  L PDG   +E S   +A+ +KL AK+ND +KG+V  E    + + +  ++ E   + +S   A      V A G  I   P  K +AL  Y+ G + GG+ W  +LT +N M TYN S  Y    NL  +V+A TTPE    +   G++YQCNP T +RAK+ S G+V A   N+C + V+V V       D  PKFG  C LG
Sbjct:    1 MKHTTPHGVTVTAKSEH--SKGVNGALEAKFFHAKSGVSIDKAKLNPDGSMGLEASRRDIAKNVKLVAKVNDVLKGEVSMEHTVGKSSTRATLDVEGNWMRTSTCMAVGSSLLVGAQGDFIVGAP--KDSALKSYSVGAATGGSRWGASLTCTNAMQTYNASGFYILQPNLVGSVMAVTTPEKSETSFEAGVRYQCNPKTTVRAKVNSNGLVQACAVNRCADKVAVTVTAAAAKNDTTPKFGLLCALG 244          
BLAST of jgi.p|Trimin1|81206 vs. uniprot
Match: A0A1Z5KDV9_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KDV9_FISSO)

HSP 1 Score: 98.6 bits (244), Expect = 2.000e-20
Identity = 86/271 (31.73%), Postives = 139/271 (51.29%), Query Frame = 0
Query:    4 PPFYKDLTKAVSDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEF-VGARMALKTEVNTELTKITSSATAAY-DGVNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKD---MQPKFGF 269
            P  + D+ K V D+L DDY+ K +LK K +    VA T E E      +A K+  K+++    F++DK  L  DGG+++E S+  +   +KL+ K +     D+G ++ +G+  A        ++K+++SA  A   G+  GG  +  L G K   L+ +N G SY     FT+L  S+K +TY+VS  Y    +LT A L + + E+    V VG  Y+     +L+AK+ S+G+VHA +       VS+  +  M   D    +P FG 
Sbjct:   51 PTKFADIDKPVKDILNDDYTSKVSLKCK-SNAGPVAVTIETERGATGALASKIGTKFSYAK--FNVDKGQLTADGGSALETSMK-LTPDIKLSFKTSKG--ADLGIDYTLGSFYATGVLDVQNMSKVSTSACYALPSGLKVGGDAVYSLSG-KTTGLAGFNVGASYAKGPIFTSLV-SSKFSTYSVSVGYNVNQDLTIASLTTHSAENRCNLVGVGASYKNPVIGMLKAKVGSDGVVHACLVKDIAPKVSLTASGSMLATDPSTFKPGFGI 313          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|81206 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YRG3_9STRA1.160e-191100.00Voltage dependent anion channel n=1 Tax=Tribonema ... [more]
A0A835YZM2_9STRA4.260e-14173.80Voltage dependent anion channel n=1 Tax=Tribonema ... [more]
D8LG27_ECTSI2.850e-6041.91Voltage dependent anion channel n=1 Tax=Ectocarpus... [more]
A0A6H5L9E4_9PHAE6.430e-4939.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Z5KDV9_FISSO2.000e-2031.73Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023614Porin domain superfamilyGENE3D2.40.160.10Porincoord: 1..273
e-value: 9.0E-46
score: 158.3
IPR027246Eukaryotic porin/Tom40PFAMPF01459Porin_3coord: 4..268
e-value: 3.8E-23
score: 82.3
NoneNo IPR availablePANTHERPTHR11743:SF23GH26960P-RELATEDcoord: 1..272
IPR001925Porin, eukaryotic typePANTHERPTHR11743VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNELcoord: 1..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_61contigContig_61:403146..409183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|81206mRNA_8703Tribonema minus UTEX_B_3156 mRNAContig_61 403095..409218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|81206|CE81205_418 ID=Trimin1|81206|CE81205_418|Name=jgi.p|Trimin1|81206|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=275bp
MSPPPFYKDLTKAVSDLLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGAS
GVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKIN
DAIKGDVGTEFVGARMALKTEVNTELTKITSSATAAYDGVNAGGIVIAKL
PGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTA
VLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGV
SVGVATEMNTKDMQPKFGFNCTLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023614Porin_dom_sf
IPR027246Porin_Euk/Tom40
IPR001925Porin_Euk