mRNA_8574 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|350131
Unique NamemRNA_8574
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: A0A835YP68_9STRA (DUF2431 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP68_9STRA)

HSP 1 Score: 647 bits (1670), Expect = 1.260e-232
Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 1
Query:    1 MAHVLSPYLSRHTVCGGEVNDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHGGAAAGGVATRDAPAYQHELHLVGAPPEDPDAVARAVRSVAGAGNVLAVRLVHTYAPPQQPLFPQHDSGGQAGSGXXXXXXXXXXXXXXXXXXXXAAIANCAYEITYASRTAALSRGAADELRAAVEAQVPALLGGRALRPGKSGRGVSRAVPAHLLGFHG 1161
            MAHVLSPYLSRHTVCGGEVNDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHGGAAAGGVATRDAPAYQHELHLVGAPPEDPDAVARAVRSVAGAGNVLAVRLVHTYAPPQQPLFPQHDSGGQAGSGXXXXXXXXXXXXXXXXXXXXAAIANCAYEITYASRTAALSRGAADELRAAVEAQVPALLGGRALRPGKSGRGVSRAVPAHLLGFHG
Sbjct:    1 MAHVLSPYLSRHTVCGGEVNDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHGGAAAGGVATRDAPAYQHELHLVGAPPEDPDAVARAVRSVAGAGNVLAVRLVHTYAPPQQPLFPQHDSGGQAGSGXXXXXXXXXXXXXXXXXXXXAAIANCAYEITYASRTAALSRGAADELRAAVEAQVPALLGGRALRPGKSGRGVSRAVPAHLLGFHG 387          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: A0A3M6UI79_POCDA (FDX-ACB domain-containing protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UI79_POCDA)

HSP 1 Score: 94.4 bits (233), Expect = 3.030e-17
Identity = 74/208 (35.58%), Postives = 96/208 (46.15%), Query Frame = 1
Query:   58 NDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHG 681
            N++L++GDGNFSF+  L S L +                                +A LS+F+   +LH VDAT L         +R FDRVI+NFPH  GK N  ++R LL    AS A    R +G+ CV+L  GQGGT  +    +    SWQ   +AA+AGL L  V  F   D+  Y  A  R   G        L H FVHG
Sbjct:   11 NNVLVVGDGNFSFTVCLASALSKTS-------VKIVATSLDSRAALASNDFALGNIAKLSSFENVEILHEVDATDLCQK----FGSRTFDRVIFNFPHTGGKSNIAKSRDLLERFFASAAHHVERFKGDICVSLCQGQGGTPLDNPRRE-LGNSWQVVYRAAKAGLILNDVYPFKSEDYTSYRSAGFRGQLGKGFHTVNGLTHVFVHG 206          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: A0A8J5XRQ9_DIALT (DUF2431 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XRQ9_DIALT)

HSP 1 Score: 93.2 bits (230), Expect = 4.320e-17
Identity = 100/286 (34.97%), Postives = 122/286 (42.66%), Query Frame = 1
Query:   31 RHTVCGGEVNDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGA-------FSPGAAPLLHTFVHGGAAAG-GVATRDAPAYQHELHL----VGAPPEDPDAVARAVRSVAGAGNVLAVRLVHTYAPP 852
            + T  G  V  +L++GD +FSF+  L  +L    +                           + LA L A     V HGVDATRL +   P    R    +IYNFPHV GK N RRNR LL D L +   + L   G+ CVAL  GQGGTS E    D +  +WQA  QA  A   L     ++     GYA  C R  G A       F  G   L+H F    AAA  GV+  D P Y HEL L    VG+       + R V  V G     AV    TY  P
Sbjct:   26 QRTALGAAVQRVLVVGDADFSFAAGLQRVLAASGRPVELIATGYEPERGLDERFPR----AREHLAFLRASG-ARVEHGVDATRLPERFAPGSACR----IIYNFPHVVGKSNLRRNRDLLRDFLRATT-SVLAPGGDVCVALCEGQGGTSLERAPCD-WAMTWQATVQANRAAHVLVDAVPWAEMAVEGYA-PC-RAKGSAESAFSLSFELGEGALVHIFAPAHAAAERGVSCADGPLYLHELQLARSAVGSSALSAAELLRFVEPVVGRNLARAVHHRETYDHP 298          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: A0A2B4RVJ2_STYPI (Ferredoxin-fold anticodon-binding domain-containing protein 1-like n=4 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RVJ2_STYPI)

HSP 1 Score: 92.4 bits (228), Expect = 1.310e-16
Identity = 73/208 (35.10%), Postives = 96/208 (46.15%), Query Frame = 1
Query:   58 NDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHG 681
            + +L++GDGNFSF+  L S L +                              + +  LSAF+   +LH VDAT L         +R+FDRVI+NFPH  GK N  ++R LL    AS A    R  G+ CV+L  GQGGT  +    +    SWQ   +AA+AGL L AV  F   ++  Y  A  R   G        L H FVHG
Sbjct:   11 DSVLVVGDGNFSFTVCLASALSKTS-------VKIVATSFDSRTALASNEFALENIEKLSAFENIEILHEVDATDLRRK----FGSRKFDRVIFNFPHTGGKSNIAKSRDLLERFFASAAHHVERFEGDICVSLCQGQGGTPLDNPRRE-LGNSWQVVCRAAKAGLILNAVYPFKSEEYTAYRSAGFRGQLGKGFHTINGLTHVFVHG 206          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: UPI0009E2B79D (uncharacterized protein LOC110043430 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E2B79D)

HSP 1 Score: 88.6 bits (218), Expect = 3.130e-15
Identity = 74/208 (35.58%), Postives = 96/208 (46.15%), Query Frame = 1
Query:   58 NDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHG 681
            N++L++GDGNFSF+  L S L                                + +  LSAF    +LH VDAT L     P    R FDRVI+NFPH  GK N  ++R LL    AS A   + + G+ CV+L  GQGGT  +    + +  +WQ  +QAA+AGL L AV  F   D+  Y  A  R   G        L H FV G
Sbjct:   11 NNVLVVGDGNFSFTVCLASALSETS-------VKIVATSLDSRAALANNDFAVENIDKLSAFKNVEILHEVDATNLTGNFGP----RIFDRVIFNFPHTGGKSNIGKSRELLERFFASAAHH-VDSNGDICVSLCQGQGGTPLDNPRRE-HGNTWQVVSQAAKAGLILNAVYPFRSVDYTSYRSAGFRGQLGKGFHTINGLTHVFVPG 205          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: UPI001CF27E77 (ferredoxin-fold anticodon-binding domain-containing protein 1-like n=4 Tax=Acropora TaxID=6127 RepID=UPI001CF27E77)

HSP 1 Score: 87.8 bits (216), Expect = 4.340e-15
Identity = 71/207 (34.30%), Postives = 95/207 (45.89%), Query Frame = 1
Query:   61 DILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHG 681
            D+LI+GDGNFSF+  L S L                                + +A LS ++   + H VDAT ++        +R FDR+I+NFPH+ GK N  ++R LL    AS  +      GE CV+L  GQGGT  +    +    SWQ   QAA++ L L AV  F+ AD+  Y  A  R   G        L H FVHG
Sbjct:   12 DVLIVGDGNFSFTLCLASALSYSS-------VKIVATSLDSLPQLANNDFAVENIAKLSEYENVEMFHEVDATNISKT----FGSRVFDRIIFNFPHLGGKSNIGKSRKLLELFFASAVKHVEPFEGEICVSLCQGQGGTPMDNPRRE-LGNSWQVVYQAAKSDLILRAVYPFTSADYDCYRSAGFRGQLGKGFHTVNGLTHVFVHG 206          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: W5LZN9_LEPOC (Ferredoxin-fold anticodon binding domain containing 1 n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5LZN9_LEPOC)

HSP 1 Score: 84.3 bits (207), Expect = 7.300e-15
Identity = 81/251 (32.27%), Postives = 106/251 (42.23%), Query Frame = 1
Query:   52 EVNDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHGGAAAGGVATRDAPAYQHELHLVGAPPEDPDAVARAVRSVAG 804
            +  D+L+LG+GNFSF+ +LC       + T                       GA+    L       V   VD+TRL + P   L  + FD +I+NFPH   K   +RNR+LL     S A+  L+  GE  V L  GQGGT A+ + +  +  SWQA   AAEAG  L+ +  F  A + GY    +R     F    A L H F           TR  P          APPE   A AR  R   G
Sbjct:   10 DPRDVLLLGEGNFSFAAALCQAGGGSPRVTATCYQAEEAVLQQE---------GAEENIQLLREHGAEVHFAVDSTRLGECPA--LAGQLFDHIIFNFPHCGRKAGVKRNRSLLAKFFLSCAQV-LKDSGEVHVTLCNGQGGTPAD-QPMREWHNSWQAVAMAAEAGFILSEIRPFDGAKYHGYRSTGYRSQDKTFHAEGA-LTHVF-----------TRSLPC---------APPESVQAEARLARGSVG 226          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: A0A8J7NTZ3_ATRSP (FDXA1 protein (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7NTZ3_ATRSP)

HSP 1 Score: 87.0 bits (214), Expect = 7.350e-15
Identity = 70/208 (33.65%), Postives = 95/208 (45.67%), Query Frame = 1
Query:   52 EVNDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFV 675
            +  D+L++G+GNFSF+ +LC       + T                       GA+    L       V  GVD TRL + P   L  + FDR+I+NFPH   K   +RNR+LL     S A+  L+  GE  V L  GQGGT A+ + +  +  SWQA   AAEAG  L+ +  F  A + GY    +R     F    A L H F 
Sbjct:    6 DPQDVLLVGEGNFSFAAALCQAAGGSARVTATCYQPEEAVLQQE---------GAEENIQLLRDHGAEVHFGVDTTRLGECPA--LARQLFDRIIFNFPHCGRKAGVKRNRSLLAKFFLSCAQV-LKDSGEVHVTLCNGQGGTPAD-QPMREWHNSWQAVAMAAEAGFILSEIRPFDCAKYRGYRSTGYRSQDKTFHVEGA-LTHVFT 199          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: A0A7D9H712_PARCT (Ferredoxin-fold anticodon-binding domain-containing 1-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9H712_PARCT)

HSP 1 Score: 85.5 bits (210), Expect = 2.490e-14
Identity = 68/209 (32.54%), Postives = 95/209 (45.45%), Query Frame = 1
Query:   64 ILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPG---AAPLLHTFVHG 681
            +L++GDGNFSFS SL        +D                            L  L A++   +LH +DAT+L++  P     R+FDR+I+NFPH  GK N ++ R LL D   S         G+ CV L  GQGGT  +      +  SWQ    AA+AGL L  +  F  +D+  Y    +R   G  + G   A  L+H F+ G
Sbjct:   22 VLVVGDGNFSFSLSLAVF-----RDELGLNTHLALTSFDSKDILTQDEFTRVNLERLQAYENVEILHNIDATKLSEYFP----TRKFDRIIFNFPHTGGKSNIKKCRKLLEDFFISAIEHIESYDGDICVTLCKGQGGTPVD-EPQRSHGNSWQIVNNAAKAGLILHQLHPFLDSDYAHYTSVGYR---GKLAKGFHTAGGLIHIFIPG 217          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: UPI001604327A (ferredoxin-fold anticodon-binding domain-containing protein 1 homolog n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001604327A)

HSP 1 Score: 84.7 bits (208), Expect = 4.590e-14
Identity = 78/216 (36.11%), Postives = 97/216 (44.91%), Query Frame = 1
Query:   25 LSRHTVCGGEVNDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTF 672
            ++   VC G+V   L+LGDGNFSFS +L   +      T                         D  A        TV+ GVDAT L   P   L+ ++FD +I+NFPHV  K   +RNR LL     S A   L A G   V L  GQGGT A+ +    +  SWQA   AAEAGL L  V  F   D+  YA + +R    AF    A L H F
Sbjct:    1 MNMERVCEGKV---LVLGDGNFSFSVALVQRMATPAHLTATALGGEEEALKQHSEAGNNIQALQDKGA--------TVMFGVDATALTACPR--LQGQKFDHIIFNFPHVGRKAPIKRNRELLRKVFISCAEL-LCAEGHVYVTLCQGQGGTPAD-QPQRAWHNSWQAVAMAAEAGLILGEVVPFCAEDWEVYAPSGYRSRDKAFHTEGA-LTHIF 200          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YP68_9STRA1.260e-232100.00DUF2431 domain-containing protein n=1 Tax=Tribonem... [more]
A0A3M6UI79_POCDA3.030e-1735.58FDX-ACB domain-containing protein n=1 Tax=Pocillop... [more]
A0A8J5XRQ9_DIALT4.320e-1734.97DUF2431 domain-containing protein n=1 Tax=Diacrone... [more]
A0A2B4RVJ2_STYPI1.310e-1635.10Ferredoxin-fold anticodon-binding domain-containin... [more]
UPI0009E2B79D3.130e-1535.58uncharacterized protein LOC110043430 n=1 Tax=Orbic... [more]
UPI001CF27E774.340e-1534.30ferredoxin-fold anticodon-binding domain-containin... [more]
W5LZN9_LEPOC7.300e-1532.27Ferredoxin-fold anticodon binding domain containin... [more]
A0A8J7NTZ3_ATRSP7.350e-1533.65FDXA1 protein (Fragment) n=1 Tax=Atractosteus spat... [more]
A0A7D9H712_PARCT2.490e-1432.54Ferredoxin-fold anticodon-binding domain-containin... [more]
UPI001604327A4.590e-1436.11ferredoxin-fold anticodon-binding domain-containin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_57contigContig_57:147889..149528 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|350131|estExt_Genemark1.C_Ctg_570024
GOsGO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494
Preferred nameFDXACB1
DescriptionFerredoxin-fold anticodon binding domain containing 1
COG categoryJ
Max annot lvl33208|Metazoa
EggNOG OGsKOG4174@1|root,KOG4174@2759|Eukaryota,39UR5@33154|Opisthokonta,3BBRX@33208|Metazoa,3D3SB@33213|Bilateria,4851M@7711|Chordata,4954X@7742|Vertebrata,49X3N@7898|Actinopterygii
Evalue1.17e-15
Seed ortholog7918.ENSLOCP00000001596
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDomain of unknown function DUF2431
Ec32 orthologEc-00_001930.2
TranscriptId350453
TrackFilteredModels1
ProteinId350131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350131gene_8574Tribonema minus UTEX_B_3156 geneContig_57 147889..149528 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8574_2exon_8574_2Tribonema minus UTEX_B_3156 exonContig_57 147889..149042 -
exon_8574_1exon_8574_1Tribonema minus UTEX_B_3156 exonContig_57 149509..149528 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_8574UTR3_8574Tribonema minus UTEX_B_3156 three_prime_UTRContig_57 147889..147898 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8574CDS_8574Tribonema minus UTEX_B_3156 CDSContig_57 149509..149528 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350131Trimin1|350131|estExt_Genemark1.C_Ctg_570024Tribonema minus UTEX_B_3156 polypeptideContig_57 147899..149528 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8574 ID=mRNA_8574|Name=jgi.p|Trimin1|350131|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1174bp|location=Sequence derived from alignment at Contig_57:147889..149528- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGCACGTCCTGTCGCCGTATCTCAGCCGCCACACGGTGTGCGGCGG
CGAGGTCAACGACATTCTGATCCTGGGAGACGGGAACTTCAGCTTCTCGC
AGTCCCTGTGCTCATTGCTGCGGCGGCAGCACCAGGACACCCCGCCGCCG
AACGTCGTCACCACGACGCTGGACTCCGAGGAGTGGTTCAGCGCGCTCTA
CGGCGGCGGCGGCGCAGACACGCTGGCAGCGCTCAGCGCCTTCGACTTCT
GCACCGTGCTCCACGGCGTCGACGCGACGCGCCTCGCGGACGCGCCGCCG
CCGCCGCTGCGCGCGCGCCGCTTCGATCGCGTCATCTACAACTTCCCGCA
CGTCAACGGCAAGCAGAACGCGCGGCGCAACAGGGCGCTGCTGTGCGACA
CGCTGGCAAGCGTGGCGCGCGCCGCGCTGCGCGCGCGCGGCGAGGCCTGC
GTCGCCCTCGTCACCGGCCAGGGCGGCACGTCCGCAGAGGCGCGCACGCT
CGACGGTTACACGCAGTCTTGGCAGGCCGCAACGCAGGCCGCGGAGGCGG
GGCTGACGCTTGCCGCCGTGGAGCTGTTCTCCGTGGCAGACTTCCCGGGG
TACGCGCTCGCGTGCCACCGCCCGCACGGCGGCGCCTTCTCGCCCGGCGC
CGCGCCGCTGCTGCACACGTTCGTGCACGGCGGCGCGGCGGCGGGGGGCG
TCGCGACGCGTGATGCGCCCGCGTACCAGCACGAGCTGCACCTGGTGGGC
GCGCCGCCGGAGGACCCGGACGCGGTGGCGCGCGCAGTGCGGAGCGTCGC
CGGCGCCGGCAACGTTCTGGCGGTGCGCCTGGTACATACCTACGCCCCCC
CGCAGCAGCCCCTATTTCCGCAGCACGACAGTGGCGGCCAGGCAGGCAGC
GGAGGCGGCGGCGGCAGCGCACGCAGCGGCGGCGGCAGCAGCAGCGGCGG
CTGCAGCGGCGGCGCAGCCATCGCCAACTGCGCATATGAGATAACCTACG
CGTCACGCACGGCGGCGTTGTCGCGCGGCGCCGCCGACGAGCTGCGCGCT
GCGGTGGAGGCGCAGGTGCCCGCGCTCCTGGGCGGGCGCGCGCTGCGGCC
TGGGAAGAGCGGCCGCGGCGTGAGCCGCGCGGTTCCGGCGCACCTGCTGG
GCTTTCATGGATGATGAATTAATT
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protein sequence of jgi.p|Trimin1|350131

>Trimin1|350131|estExt_Genemark1.C_Ctg_570024 ID=Trimin1|350131|estExt_Genemark1.C_Ctg_570024|Name=jgi.p|Trimin1|350131|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=388bp
MAHVLSPYLSRHTVCGGEVNDILILGDGNFSFSQSLCSLLRRQHQDTPPP
NVVTTTLDSEEWFSALYGGGGADTLAALSAFDFCTVLHGVDATRLADAPP
PPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEAC
VALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPG
YALACHRPHGGAFSPGAAPLLHTFVHGGAAAGGVATRDAPAYQHELHLVG
APPEDPDAVARAVRSVAGAGNVLAVRLVHTYAPPQQPLFPQHDSGGQAGS
GGGGGSARSGGGSSSGGCSGGAAIANCAYEITYASRTAALSRGAADELRA
AVEAQVPALLGGRALRPGKSGRGVSRAVPAHLLGFHG*
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mRNA from alignment at Contig_57:147889..149528-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8574 ID=mRNA_8574|Name=jgi.p|Trimin1|350131|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1640bp|location=Sequence derived from alignment at Contig_57:147889..149528- (Tribonema minus UTEX_B_3156 )
ATGGCGCACGTCCTGTCGCCGTTTGAAGCGCGAGCACACGCACACACACT CGAGAGTTGGGCAAACGTCAACTCTGGAAAGTTGTTGCATAGTTGAAGTG TGAGTTTGCGTCCGCGCTTTTGTGGGGCAGGACCAAGCTGCCTGCCGCTG CAAGGCTACAGTGTGCGGCAGCGGGGTTTCATCTCGCGTCAAAGGCGCAA CTGCGCTCGTGCTCTGCGACTGCAGGCATGGGCAGCAGCTCCGCCAACAC TCATCGTCATTGTATATTCTCGCGGTCTGCTGCATGATAGCTCTGGCGAG GAGGTCATATGCACTTGTATGCCATTATGACTTTCTGCAGCAGCAGCTCA GACATCGGTCACTGGGGGCAACAGGGAGCTCGAGCCGCATCTTGCCGTTG AGAACACCTGCATCCGCACAGCGACCCGAACAGACGCCGGAACAGTCTCA TGGACCAGACTCTCCACTGCATACACCACTACATAGGTATCTCAGCCGCC ACACGGTGTGCGGCGGCGAGGTCAACGACATTCTGATCCTGGGAGACGGG AACTTCAGCTTCTCGCAGTCCCTGTGCTCATTGCTGCGGCGGCAGCACCA GGACACCCCGCCGCCGAACGTCGTCACCACGACGCTGGACTCCGAGGAGT GGTTCAGCGCGCTCTACGGCGGCGGCGGCGCAGACACGCTGGCAGCGCTC AGCGCCTTCGACTTCTGCACCGTGCTCCACGGCGTCGACGCGACGCGCCT CGCGGACGCGCCGCCGCCGCCGCTGCGCGCGCGCCGCTTCGATCGCGTCA TCTACAACTTCCCGCACGTCAACGGCAAGCAGAACGCGCGGCGCAACAGG GCGCTGCTGTGCGACACGCTGGCAAGCGTGGCGCGCGCCGCGCTGCGCGC GCGCGGCGAGGCCTGCGTCGCCCTCGTCACCGGCCAGGGCGGCACGTCCG CAGAGGCGCGCACGCTCGACGGTTACACGCAGTCTTGGCAGGCCGCAACG CAGGCCGCGGAGGCGGGGCTGACGCTTGCCGCCGTGGAGCTGTTCTCCGT GGCAGACTTCCCGGGGTACGCGCTCGCGTGCCACCGCCCGCACGGCGGCG CCTTCTCGCCCGGCGCCGCGCCGCTGCTGCACACGTTCGTGCACGGCGGC GCGGCGGCGGGGGGCGTCGCGACGCGTGATGCGCCCGCGTACCAGCACGA GCTGCACCTGGTGGGCGCGCCGCCGGAGGACCCGGACGCGGTGGCGCGCG CAGTGCGGAGCGTCGCCGGCGCCGGCAACGTTCTGGCGGTGCGCCTGGTA CATACCTACGCCCCCCCGCAGCAGCCCCTATTTCCGCAGCACGACAGTGG CGGCCAGGCAGGCAGCGGAGGCGGCGGCGGCAGCGCACGCAGCGGCGGCG GCAGCAGCAGCGGCGGCTGCAGCGGCGGCGCAGCCATCGCCAACTGCGCA TATGAGATAACCTACGCGTCACGCACGGCGGCGTTGTCGCGCGGCGCCGC CGACGAGCTGCGCGCTGCGGTGGAGGCGCAGGTGCCCGCGCTCCTGGGCG GGCGCGCGCTGCGGCCTGGGAAGAGCGGCCGCGGCGTGAGCCGCGCGGTT CCGGCGCACCTGCTGGGCTTTCATGGATGATGAATTAATT
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Coding sequence (CDS) from alignment at Contig_57:147889..149528-

>mRNA_8574 ID=mRNA_8574|Name=jgi.p|Trimin1|350131|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1164bp|location=Sequence derived from alignment at Contig_57:147889..149528- (Tribonema minus UTEX_B_3156 )
ATGGCGCACGTCCTGTCGCCGTATCTCAGCCGCCACACGGTGTGCGGCGG
CGAGGTCAACGACATTCTGATCCTGGGAGACGGGAACTTCAGCTTCTCGC
AGTCCCTGTGCTCATTGCTGCGGCGGCAGCACCAGGACACCCCGCCGCCG
AACGTCGTCACCACGACGCTGGACTCCGAGGAGTGGTTCAGCGCGCTCTA
CGGCGGCGGCGGCGCAGACACGCTGGCAGCGCTCAGCGCCTTCGACTTCT
GCACCGTGCTCCACGGCGTCGACGCGACGCGCCTCGCGGACGCGCCGCCG
CCGCCGCTGCGCGCGCGCCGCTTCGATCGCGTCATCTACAACTTCCCGCA
CGTCAACGGCAAGCAGAACGCGCGGCGCAACAGGGCGCTGCTGTGCGACA
CGCTGGCAAGCGTGGCGCGCGCCGCGCTGCGCGCGCGCGGCGAGGCCTGC
GTCGCCCTCGTCACCGGCCAGGGCGGCACGTCCGCAGAGGCGCGCACGCT
CGACGGTTACACGCAGTCTTGGCAGGCCGCAACGCAGGCCGCGGAGGCGG
GGCTGACGCTTGCCGCCGTGGAGCTGTTCTCCGTGGCAGACTTCCCGGGG
TACGCGCTCGCGTGCCACCGCCCGCACGGCGGCGCCTTCTCGCCCGGCGC
CGCGCCGCTGCTGCACACGTTCGTGCACGGCGGCGCGGCGGCGGGGGGCG
TCGCGACGCGTGATGCGCCCGCGTACCAGCACGAGCTGCACCTGGTGGGC
GCGCCGCCGGAGGACCCGGACGCGGTGGCGCGCGCAGTGCGGAGCGTCGC
CGGCGCCGGCAACGTTCTGGCGGTGCGCCTGGTACATACCTACGCCCCCC
CGCAGCAGCCCCTATTTCCGCAGCACGACAGTGGCGGCCAGGCAGGCAGC
GGAGGCGGCGGCGGCAGCGCACGCAGCGGCGGCGGCAGCAGCAGCGGCGG
CTGCAGCGGCGGCGCAGCCATCGCCAACTGCGCATATGAGATAACCTACG
CGTCACGCACGGCGGCGTTGTCGCGCGGCGCCGCCGACGAGCTGCGCGCT
GCGGTGGAGGCGCAGGTGCCCGCGCTCCTGGGCGGGCGCGCGCTGCGGCC
TGGGAAGAGCGGCCGCGGCGTGAGCCGCGCGGTTCCGGCGCACCTGCTGG
GCTTTCATGGATGA
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