mRNA_8561 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A835YXC5_9STRA (Flagellar associated protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXC5_9STRA) HSP 1 Score: 418 bits (1074), Expect = 4.450e-148 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 Query: 1 TATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603 TATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL Sbjct: 1 TATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 201
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A7S3Y2J4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2J4_HETAK) HSP 1 Score: 266 bits (681), Expect = 1.260e-87 Identity = 131/202 (64.85%), Postives = 155/202 (76.73%), Query Frame = 1 Query: 1 TATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTH-DGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603 T MAS + R IVIDPFC+RQF D++YTGTKI+Y P+ E +IN F DGYA FCKH+F+PNF GV G+I IT EN LL+SGY+ART KEL VL RWF VP +LD+ILYSR+QIRKEN AMGED GSDAPWG+VS+KAQD++ E+PMQPITM+RNALG DQGGSGV LDADAY SVAFW++HAT+ Sbjct: 39 TLRMAS-SEREIVIDPFCMRQFTDDAYTGTKINYDPDDFEVKINDLFSAGQAPLVDGYAPFCKHLFVPNFAGVVGSIAAITEENIHLLKSGYEARTEKELPVLVRWFSAEDVPQSETEFLDIILYSREQIRKENEAMGEDSGSDAPWGIVSVKAQDINYEIPMQPITMMRNALGADQGGSGVTLDADAYAASVAFWTDHATI 239
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A7S4A4J5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4J5_9STRA) HSP 1 Score: 249 bits (637), Expect = 2.750e-81 Identity = 123/204 (60.29%), Postives = 151/204 (74.02%), Query Frame = 1 Query: 1 TATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQK---NPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603 T MAS A+V+DPFCLRQF+ S + E+ +N+ ++ DGYA FCKH+F+ NF+ +GA+ ITPENE LLRSGY ART KELAVL+RWFP+ S+ P A+YLD+ILYSR+QIR ENAAMGED GSDAPWG+VS+KAQDVD E+PMQPITM+RNALG D+GGSGV LDA YRESVA+W+ HA + Sbjct: 12 TTLMASALKPALVVDPFCLRQFDKTSGKAPFLDVPVADFEKRVNELYEAAGGEACLVDGYAPFCKHVFVENFVNAKGAVAAITPENEHLLRSGYSARTEKELAVLSRWFPKESIAAPTAKYLDLILYSREQIRIENAAMGEDSGSDAPWGIVSVKAQDVDSELPMQPITMMRNALGADEGGSGVALDAAKYRESVAYWAGHAPI 215
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: D7FP80_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP80_ECTSI) HSP 1 Score: 248 bits (634), Expect = 2.490e-80 Identity = 113/201 (56.22%), Postives = 157/201 (78.11%), Query Frame = 1 Query: 1 TATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQK-NPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDC-GSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHA 597 T M++ +V+D F +RQF DESYTGTK+ Y P++ E+++N+ F+ +GYA FCKH+F+PNF GV+ + V+ITPENE LL +GY+ART KEL +L+RWF G+V P A++LD+ILYSR+QIRKE AAMG++ S+APWG++S+K+QDVD E+PMQPITM+RNALG+++GGSGVPL+ + Y +SV FW +HA Sbjct: 48 TTAMSAPGGNELVMDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVPNFAGVKTSTVKITPENEKLLVAGYEARTAKELPILSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHA 248
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A7S2UWN7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN7_9STRA) HSP 1 Score: 242 bits (618), Expect = 9.520e-78 Identity = 112/203 (55.17%), Postives = 150/203 (73.89%), Query Frame = 1 Query: 1 TATMASDNNRA-IVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDC-GSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603 T +M+ D++ V+D FC+RQF+D++YTGT ++Y +Q ++++N++ DGYA FCKH+F+PNF GVE +IV IT EN L++S YQART KEL VL RW P+ V P A +LD+ILYSR+QI KEN AMG++ +DAPWG++S+KAQDVD E+PMQPITM+RNALG++ GGSGV L D Y ESV FW H T+ Sbjct: 59 TRSMSKDSSEPKFVLDKFCIRQFDDDNYTGTNVYYDKQQFQDKVNEYHDNGTPLVDGYAPFCKHLFVPNFAGVERSIVAITEENRHLIQSEYQARTDKELLVLVRWIPKDKVEPSQASFLDIILYSREQINKENEAMGQEKPDTDAPWGIISVKAQDVDHEIPMQPITMMRNALGKEHGGSGVELSRDKYTESVNFWQSHVTI 261
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A7S2CJY3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJY3_9STRA) HSP 1 Score: 238 bits (607), Expect = 3.220e-76 Identity = 122/196 (62.24%), Postives = 142/196 (72.45%), Query Frame = 1 Query: 31 AIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTH--DGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPP-----PPARYLDVILYSRDQIRKENAAMGEDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHA 597 AIV+DPFC RQFND SYTG +I S + E IN F+ DGYA FCKH+F+ NF V+ +I+ IT EN LL S Y+AR+ KEL VL RWFP+ V P A+++DVILYSR+QIRKENAAMGED GSDAPWGVVS+K Q V E+PMQPIT++RNALG DQGGSGVPLD AYR SVAFW EHA Sbjct: 54 AIVVDPFCFRQFNDPSYTGARIEMSVAEFETAINTMFEAGDAGPLVDGYAPFCKHLFVSNFAQVQSSILPITEENAPLLVSDYEARSEKELPVLVRWFPKDKVVGDDGRLPVAQFIDVILYSREQIRKENAAMGEDSGSDAPWGVVSVKPQGVSYELPMQPITVMRNALGEDQGGSGVPLDPAAYRASVAFWREHA 249
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A835Z8J8_9STRA (Flagellar associated protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J8_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.250e-73 Identity = 118/201 (58.71%), Postives = 142/201 (70.65%), Query Frame = 1 Query: 4 ATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDCGSDAP-WGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603 +T A+D + + PFCLRQF D +Y GTKI + P+ +N++ H+GYA FCKH+FM NF G+EG+IV IT ENE LLR+ Y+AR P EL VL R+FPRGSVP P A LD+ILYS +QIRKE AA ED S P WG+V IKAQ VD E+PMQPITMLRNALGR +GGSGV L+A Y ESV FWS HA + Sbjct: 33 STAAAD---LVGLTPFCLRQFTDSTYPGTKITHPPDDFNARVNEYLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAII 230
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A7S4FA99_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FA99_CHRCT) HSP 1 Score: 226 bits (577), Expect = 2.190e-72 Identity = 111/200 (55.50%), Postives = 139/200 (69.50%), Query Frame = 1 Query: 10 MASDNNRAIVIDPFCLRQFNDESYTGTKI-HYSPEQCEEEINKHFQKNPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPP-ARYLDVILYSRDQIRKENAAMGEDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603 M++ + R +DPFCLRQF+D Y+GTK+ H + E I H N DGYA FCKH+F+PNF + ITPENE LLR+ Y ART +EL VL RWFP +VP PP A++LD+ILYSR+QIRKE AMG PWG++S+KAQDVD E+PMQPITM+RNALG+ +GGSGVPL + Y ESV FW +HA + Sbjct: 1 MSAASTRKFCLDPFCLRQFDDPKYSGTKVAHDKADFLERIIAAHDAGNAPLVDGYAPFCKHLFVPNFTPATTPYLPITPENEGLLRTAYDARTEQELPVLTRWFPAETVPAPPIAKFLDIILYSREQIRKEAEAMGRTDDQTEPWGIISVKAQDVDYELPMQPITMMRNALGKSEGGSGVPLVREKYNESVNFWKQHAPI 200
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A0M0KA33_9EUKA (Flagellar associated protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KA33_9EUKA) HSP 1 Score: 221 bits (563), Expect = 2.490e-70 Identity = 111/194 (57.22%), Postives = 146/194 (75.26%), Query Frame = 1 Query: 37 VIDPFCLRQFNDE-SYTGTKIHYSPEQCEEEINKHFQKN--PTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPR-GSVPPPPARYLDVILYSRDQIRKENAAMG-EDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603 VIDPF +QF+ +Y GT++ Y + E +IN+ + P DGYA FCKH+F+PNF GV+ ++ +TPENE LRSGY+ART +ELAVL RWFP+ G+ P ARY+D+ILYSR+QI KE AAMG E+ + APWG++SIKAQDV E+PMQPITM+RNALG+++GGSGVP++ Y ESVAFWS+HA + Sbjct: 3 VIDPFAFKQFDANIAYEGTRVEYDKQAFEAKINELYASGDYPLV-DGYAPFCKHLFVPNFAGVKNNVLVVTPENEGRLRSGYEARTEQELAVLTRWFPKDGADEPTVARYMDIILYSREQINKEAAAMGREEEPTTAPWGIISIKAQDVGYELPMQPITMMRNALGKEEGGSGVPMERAKYLESVAFWSKHAPI 195
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A7S4I9S5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4I9S5_9EUKA) HSP 1 Score: 221 bits (564), Expect = 4.810e-70 Identity = 111/193 (57.51%), Postives = 141/193 (73.06%), Query Frame = 1 Query: 40 IDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKN--PTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPP-ARYLDVILYSRDQIRKENAAMGEDCGSD--APWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603 +DPF +RQF+D +YTGT+I + +IN+ + P DGYA FCKHIF+PNF + ++ IT ENE LLRSGY+ART +EL VL RWFP +VP PP A+YLD+ILYSR+QI KE AMG D D +PWG++S+KAQDVD E+PMQPITM+RN LG+++GGSGVP+D + Y SVAFWS HA L Sbjct: 35 LDPFAMRQFDDPNYTGTRIDHDKTGFAAKINELYDSGDYPLV-DGYAPFCKHIFVPNFTPAQLNVLPITKENEHLLRSGYEARTEQELEVLVRWFPVDAVPRPPVAKYLDIILYSREQINKEATAMGRDEHDDGGSPWGIISVKAQDVDYELPMQPITMMRNTLGKEEGGSGVPMDRERYTASVAFWSGHAPL 226 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8561 ID=mRNA_8561|Name=jgi.p|Trimin1|144114|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=603bp|location=Sequence derived from alignment at Contig_57:84678..87011- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ACTGCTACCATGGCATCCGACAACAACCGAGCCATCGTAATCGACCCTTTback to top protein sequence of jgi.p|Trimin1|144114 >Trimin1|144114|gw1.57.68.1 ID=Trimin1|144114|gw1.57.68.1|Name=jgi.p|Trimin1|144114|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=201bp TATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNback to top mRNA from alignment at Contig_57:84678..87011- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8561 ID=mRNA_8561|Name=jgi.p|Trimin1|144114|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2334bp|location=Sequence derived from alignment at Contig_57:84678..87011- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_57:84678..87011- >mRNA_8561 ID=mRNA_8561|Name=jgi.p|Trimin1|144114|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=603bp|location=Sequence derived from alignment at Contig_57:84678..87011- (Tribonema minus UTEX_B_3156 )back to top |