mRNA_8561 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|144114
Unique NamemRNA_8561
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A835YXC5_9STRA (Flagellar associated protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXC5_9STRA)

HSP 1 Score: 418 bits (1074), Expect = 4.450e-148
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1
Query:    1 TATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603
            TATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL
Sbjct:    1 TATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 201          
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A7S3Y2J4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2J4_HETAK)

HSP 1 Score: 266 bits (681), Expect = 1.260e-87
Identity = 131/202 (64.85%), Postives = 155/202 (76.73%), Query Frame = 1
Query:    1 TATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTH-DGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603
            T  MAS + R IVIDPFC+RQF D++YTGTKI+Y P+  E +IN  F        DGYA FCKH+F+PNF GV G+I  IT EN  LL+SGY+ART KEL VL RWF    VP     +LD+ILYSR+QIRKEN AMGED GSDAPWG+VS+KAQD++ E+PMQPITM+RNALG DQGGSGV LDADAY  SVAFW++HAT+
Sbjct:   39 TLRMAS-SEREIVIDPFCMRQFTDDAYTGTKINYDPDDFEVKINDLFSAGQAPLVDGYAPFCKHLFVPNFAGVVGSIAAITEENIHLLKSGYEARTEKELPVLVRWFSAEDVPQSETEFLDIILYSREQIRKENEAMGEDSGSDAPWGIVSVKAQDINYEIPMQPITMMRNALGADQGGSGVTLDADAYAASVAFWTDHATI 239          
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A7S4A4J5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4J5_9STRA)

HSP 1 Score: 249 bits (637), Expect = 2.750e-81
Identity = 123/204 (60.29%), Postives = 151/204 (74.02%), Query Frame = 1
Query:    1 TATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQK---NPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603
            T  MAS    A+V+DPFCLRQF+  S     +       E+ +N+ ++         DGYA FCKH+F+ NF+  +GA+  ITPENE LLRSGY ART KELAVL+RWFP+ S+  P A+YLD+ILYSR+QIR ENAAMGED GSDAPWG+VS+KAQDVD E+PMQPITM+RNALG D+GGSGV LDA  YRESVA+W+ HA +
Sbjct:   12 TTLMASALKPALVVDPFCLRQFDKTSGKAPFLDVPVADFEKRVNELYEAAGGEACLVDGYAPFCKHVFVENFVNAKGAVAAITPENEHLLRSGYSARTEKELAVLSRWFPKESIAAPTAKYLDLILYSREQIRIENAAMGEDSGSDAPWGIVSVKAQDVDSELPMQPITMMRNALGADEGGSGVALDAAKYRESVAYWAGHAPI 215          
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: D7FP80_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP80_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 2.490e-80
Identity = 113/201 (56.22%), Postives = 157/201 (78.11%), Query Frame = 1
Query:    1 TATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQK-NPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDC-GSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHA 597
            T  M++     +V+D F +RQF DESYTGTK+ Y P++ E+++N+ F+       +GYA FCKH+F+PNF GV+ + V+ITPENE LL +GY+ART KEL +L+RWF  G+V  P A++LD+ILYSR+QIRKE AAMG++   S+APWG++S+K+QDVD E+PMQPITM+RNALG+++GGSGVPL+ + Y +SV FW +HA
Sbjct:   48 TTAMSAPGGNELVMDAFAMRQFTDESYTGTKVAYDPQEFEDKVNEIFRAAGGKLEEGYAPFCKHVFVPNFAGVKTSTVKITPENEKLLVAGYEARTAKELPILSRWFESGTVETPEAKFLDIILYSREQIRKETAAMGKEKEDSEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHA 248          
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A7S2UWN7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN7_9STRA)

HSP 1 Score: 242 bits (618), Expect = 9.520e-78
Identity = 112/203 (55.17%), Postives = 150/203 (73.89%), Query Frame = 1
Query:    1 TATMASDNNRA-IVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDC-GSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603
            T +M+ D++    V+D FC+RQF+D++YTGT ++Y  +Q ++++N++        DGYA FCKH+F+PNF GVE +IV IT EN  L++S YQART KEL VL RW P+  V P  A +LD+ILYSR+QI KEN AMG++   +DAPWG++S+KAQDVD E+PMQPITM+RNALG++ GGSGV L  D Y ESV FW  H T+
Sbjct:   59 TRSMSKDSSEPKFVLDKFCIRQFDDDNYTGTNVYYDKQQFQDKVNEYHDNGTPLVDGYAPFCKHLFVPNFAGVERSIVAITEENRHLIQSEYQARTDKELLVLVRWIPKDKVEPSQASFLDIILYSREQINKENEAMGQEKPDTDAPWGIISVKAQDVDHEIPMQPITMMRNALGKEHGGSGVELSRDKYTESVNFWQSHVTI 261          
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A7S2CJY3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJY3_9STRA)

HSP 1 Score: 238 bits (607), Expect = 3.220e-76
Identity = 122/196 (62.24%), Postives = 142/196 (72.45%), Query Frame = 1
Query:   31 AIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTH--DGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPP-----PPARYLDVILYSRDQIRKENAAMGEDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHA 597
            AIV+DPFC RQFND SYTG +I  S  + E  IN  F+        DGYA FCKH+F+ NF  V+ +I+ IT EN  LL S Y+AR+ KEL VL RWFP+  V       P A+++DVILYSR+QIRKENAAMGED GSDAPWGVVS+K Q V  E+PMQPIT++RNALG DQGGSGVPLD  AYR SVAFW EHA
Sbjct:   54 AIVVDPFCFRQFNDPSYTGARIEMSVAEFETAINTMFEAGDAGPLVDGYAPFCKHLFVSNFAQVQSSILPITEENAPLLVSDYEARSEKELPVLVRWFPKDKVVGDDGRLPVAQFIDVILYSREQIRKENAAMGEDSGSDAPWGVVSVKPQGVSYELPMQPITVMRNALGEDQGGSGVPLDPAAYRASVAFWREHA 249          
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A835Z8J8_9STRA (Flagellar associated protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J8_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.250e-73
Identity = 118/201 (58.71%), Postives = 142/201 (70.65%), Query Frame = 1
Query:    4 ATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKNPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDCGSDAP-WGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603
            +T A+D    + + PFCLRQF D +Y GTKI + P+     +N++       H+GYA FCKH+FM NF G+EG+IV IT ENE LLR+ Y+AR P EL VL R+FPRGSVP P A  LD+ILYS +QIRKE AA  ED  S  P WG+V IKAQ VD E+PMQPITMLRNALGR +GGSGV L+A  Y ESV FWS HA +
Sbjct:   33 STAAAD---LVGLTPFCLRQFTDSTYPGTKITHPPDDFNARVNEYLAGGGKLHEGYAEFCKHLFMKNFAGIEGSIVPITAENEPLLRTCYEARRPAELPVLLRYFPRGSVPAPAAPTLDIILYSGEQIRKERAARQEDDTSWEPQWGIVGIKAQAVDYEIPMQPITMLRNALGRSEGGSGVALNAQKYSESVEFWSAHAII 230          
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A7S4FA99_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FA99_CHRCT)

HSP 1 Score: 226 bits (577), Expect = 2.190e-72
Identity = 111/200 (55.50%), Postives = 139/200 (69.50%), Query Frame = 1
Query:   10 MASDNNRAIVIDPFCLRQFNDESYTGTKI-HYSPEQCEEEINKHFQKNPTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPP-ARYLDVILYSRDQIRKENAAMGEDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603
            M++ + R   +DPFCLRQF+D  Y+GTK+ H   +  E  I  H   N    DGYA FCKH+F+PNF       + ITPENE LLR+ Y ART +EL VL RWFP  +VP PP A++LD+ILYSR+QIRKE  AMG       PWG++S+KAQDVD E+PMQPITM+RNALG+ +GGSGVPL  + Y ESV FW +HA +
Sbjct:    1 MSAASTRKFCLDPFCLRQFDDPKYSGTKVAHDKADFLERIIAAHDAGNAPLVDGYAPFCKHLFVPNFTPATTPYLPITPENEGLLRTAYDARTEQELPVLTRWFPAETVPAPPIAKFLDIILYSREQIRKEAEAMGRTDDQTEPWGIISVKAQDVDYELPMQPITMMRNALGKSEGGSGVPLVREKYNESVNFWKQHAPI 200          
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A0M0KA33_9EUKA (Flagellar associated protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0KA33_9EUKA)

HSP 1 Score: 221 bits (563), Expect = 2.490e-70
Identity = 111/194 (57.22%), Postives = 146/194 (75.26%), Query Frame = 1
Query:   37 VIDPFCLRQFNDE-SYTGTKIHYSPEQCEEEINKHFQKN--PTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPR-GSVPPPPARYLDVILYSRDQIRKENAAMG-EDCGSDAPWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603
            VIDPF  +QF+   +Y GT++ Y  +  E +IN+ +     P   DGYA FCKH+F+PNF GV+  ++ +TPENE  LRSGY+ART +ELAVL RWFP+ G+  P  ARY+D+ILYSR+QI KE AAMG E+  + APWG++SIKAQDV  E+PMQPITM+RNALG+++GGSGVP++   Y ESVAFWS+HA +
Sbjct:    3 VIDPFAFKQFDANIAYEGTRVEYDKQAFEAKINELYASGDYPLV-DGYAPFCKHLFVPNFAGVKNNVLVVTPENEGRLRSGYEARTEQELAVLTRWFPKDGADEPTVARYMDIILYSREQINKEAAAMGREEEPTTAPWGIISIKAQDVGYELPMQPITMMRNALGKEEGGSGVPMERAKYLESVAFWSKHAPI 195          
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Match: A0A7S4I9S5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4I9S5_9EUKA)

HSP 1 Score: 221 bits (564), Expect = 4.810e-70
Identity = 111/193 (57.51%), Postives = 141/193 (73.06%), Query Frame = 1
Query:   40 IDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKN--PTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELAVLARWFPRGSVPPPP-ARYLDVILYSRDQIRKENAAMGEDCGSD--APWGVVSIKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHATL 603
            +DPF +RQF+D +YTGT+I +       +IN+ +     P   DGYA FCKHIF+PNF   +  ++ IT ENE LLRSGY+ART +EL VL RWFP  +VP PP A+YLD+ILYSR+QI KE  AMG D   D  +PWG++S+KAQDVD E+PMQPITM+RN LG+++GGSGVP+D + Y  SVAFWS HA L
Sbjct:   35 LDPFAMRQFDDPNYTGTRIDHDKTGFAAKINELYDSGDYPLV-DGYAPFCKHIFVPNFTPAQLNVLPITKENEHLLRSGYEARTEQELEVLVRWFPVDAVPRPPVAKYLDIILYSREQINKEATAMGRDEHDDGGSPWGIISVKAQDVDYELPMQPITMMRNTLGKEEGGSGVPMDRERYTASVAFWSGHAPL 226          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|144114 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YXC5_9STRA4.450e-148100.00Flagellar associated protein (Fragment) n=1 Tax=Tr... [more]
A0A7S3Y2J4_HETAK1.260e-8764.85Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4A4J5_9STRA2.750e-8160.29Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D7FP80_ECTSI2.490e-8056.22Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2UWN7_9STRA9.520e-7855.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2CJY3_9STRA3.220e-7662.24Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835Z8J8_9STRA1.250e-7358.71Flagellar associated protein n=2 Tax=Tribonema min... [more]
A0A7S4FA99_CHRCT2.190e-7255.50Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A0M0KA33_9EUKA2.490e-7057.22Flagellar associated protein n=1 Tax=Chrysochromul... [more]
A0A7S4I9S5_9EUKA4.810e-7057.51Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_57contigContig_57:84678..87011 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|144114|gw1.57.68.1
DescriptionProtein of unknown function (DUF3228)
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs29VSF@1|root,2RXMS@2759|Eukaryota
Evalue4.08e-81
Seed ortholog2880.D7FP80
Hectar predicted targeting categoryother localisation
TranscriptId144436
TrackFilteredModels1
ProteinId144114
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|144114gene_8561Tribonema minus UTEX_B_3156 geneContig_57 84678..87011 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|144114Trimin1|144114|gw1.57.68.1Tribonema minus UTEX_B_3156 polypeptideContig_57 84678..87011 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8561_3exon_8561_3Tribonema minus UTEX_B_3156 exonContig_57 84678..84870 -
exon_8561_2exon_8561_2Tribonema minus UTEX_B_3156 exonContig_57 86044..86224 -
exon_8561_1exon_8561_1Tribonema minus UTEX_B_3156 exonContig_57 86783..87011 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8561CDS_8561Tribonema minus UTEX_B_3156 CDSContig_57 86783..87011 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8561 ID=mRNA_8561|Name=jgi.p|Trimin1|144114|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=603bp|location=Sequence derived from alignment at Contig_57:84678..87011- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ACTGCTACCATGGCATCCGACAACAACCGAGCCATCGTAATCGACCCTTT
CTGCCTTCGGCAGTTTAACGATGAAAGCTACACTGGAACAAAGATCCACT
ATTCACCAGAACAGTGCGAAGAGGAGATCAACAAGCATTTCCAAAAAAAT
CCTACCACGCACGATGGCTACGCCTCCTTCTGCAAACACATCTTCATGCC
GAACTTCATGGGCGTCGAGGGTGCCATAGTGCGCATCACGCCGGAGAACG
AGGCGCTGCTGCGCTCCGGCTACCAGGCGCGCACGCCCAAGGAGCTGGCG
GTGCTCGCGCGCTGGTTCCCGCGCGGCAGCGTGCCGCCGCCGCCCGCGCG
CTACCTGGACGTCATCCTCTACAGCCGCGACCAGATCCGCAAGGAGAACG
CCGCCATGGGCGAGGACTGCGGCTCCGACGCGCCGTGGGGCGTCGTGAGC
ATCAAGGCGCAGGACGTGGACCGCGAGGTCCCCATGCAGCCCATCACCAT
GCTGCGCAACGCGCTCGGCAGGGACCAGGGCGGCAGCGGCGTGCCCCTCG
ACGCGGACGCGTACCGGGAGAGCGTCGCCTTCTGGAGCGAGCACGCGACG
CTC
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protein sequence of jgi.p|Trimin1|144114

>Trimin1|144114|gw1.57.68.1 ID=Trimin1|144114|gw1.57.68.1|Name=jgi.p|Trimin1|144114|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=201bp
TATMASDNNRAIVIDPFCLRQFNDESYTGTKIHYSPEQCEEEINKHFQKN
PTTHDGYASFCKHIFMPNFMGVEGAIVRITPENEALLRSGYQARTPKELA
VLARWFPRGSVPPPPARYLDVILYSRDQIRKENAAMGEDCGSDAPWGVVS
IKAQDVDREVPMQPITMLRNALGRDQGGSGVPLDADAYRESVAFWSEHAT
L
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mRNA from alignment at Contig_57:84678..87011-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8561 ID=mRNA_8561|Name=jgi.p|Trimin1|144114|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2334bp|location=Sequence derived from alignment at Contig_57:84678..87011- (Tribonema minus UTEX_B_3156 )
ACTGCTACCATGGCATCCGACAACAACCGAGCCATCGTAATCGACCCTTT CTGCCTTCGGCAGTTTAACGATGAAAGCTACACTGGAACAAAGATCCACT ATTCACCAGAACAGTGCGAAGAGGAGATCAACAAGCATTTCCAAAAAAAT CCTACCACGCACGATGGCTACGCCTCCTTCTGCAAACACATCTTCATGCC GAACTTCATGGGCGTCGAGGGTGCCATAGGTGGGAGATATGATTGACGCT GAGCTTCGTGAGTGTGGAACTGCATGTGCAGCTCCAGATGTCAGAGGAGC AGCTGTGCACTCGTTCGACATACTGCTGCGCTACCAGTTGCTGCTGCAGC GCAATAGGCTCGCAGCCGCCAAAGTGCATGTTCTTTGAAAGGAGACTGCT GCCGCAACTGCTGCAGACCTGCCGCCAGGCATGCGCGCCAACAGTCGCCG GCGTCCATACGCTGCCGTTCAGCAGCTGCACCTTCATCCCAGCAACTGCA CCTGCATGAACCGACCGCCTGCGTGTGCGCATTCTCCTTCGCGCAGTGCG CACGCAGCCGAAGCACTAGGCGTCGCTGCACTGCAAGCTGCAGCACCTGC CCTCGCAGCGCTTGCGTCGGAGAAACGATGCGGCATTTCCCAACGTCGCT GCCCTGCAACGTGCGACGGCTGCCCGTGCGCAACGCTTGCGTCGGAAGAA GAATGCGGCATCACTTCGTATGGCACCTGAGCCATCACCGCTTGCGCATC CCCATCGGCGTCGCCTTCGTCCGCCCCCCTCTCGCAGTGCGCATCACGCC GGAGAACGAGGCGCTGCTGCGCTCCGGCTACCAGGCGCGCACGCCCAAGG AGCTGGCGGTGCTCGCGCGCTGGTTCCCGCGCGGCAGCGTGCCGCCGCCG CCCGCGCGCTACCTGGACGTCATCCTCTACAGCCGCGACCAGATCCGCAA GGAGAACGCCGCCATGGGGTAAGTCGCGTCGTCGGCGCGGTACGCGGTGG CGGCTGCCGCAGCGACCGCTGCTGCCAGTGTGCGCGCATGTTGTCGCGTT GGGGCGTTGTTGAGAGAGGCTGCTGCTGCTGCGCGCGCGGCGTCGCCGCC GCCGGCCGCGGCCATGTGATGTTTTGCCTGCAGCAGTGCTCAGAGCCGTT GCGCCGCGGCACCTCTTGGTGCCCCTCGTGTCCCGCTTTTGCAGGAGCAT ATTTCCAAGGTGCCTGACCGTCTTTGAGTATGTTGCGTGTATTGCATGCG GCATGGTGCGTGGACTGGCAGAAACAGCGCGACGGGGGCATGCACTGCGC AGGAATGTTCCGTCTGCTCTCTGAGCACTGTGCTGCTGCTGGCGTATCAG CCCGCACGAGTCGGTAGCTCTAAGACAATGGGCCGCTGCCGCAAGCCGTG AGACGCTTCGCAACGCACCCTGAGGTGCCGTCGCAGTAGTTGTACACGAA GTACCTTCAAGCAGTTTGCTGAGAGCAATGCTCATAGAGGCAGGTCATGC GCATGGCTCGCAGCATCAACTCCCTTTGGCTGTACTGACGTGCTTCGGCG GCTGCTACATGATCGCCACGATGTCCAACTCCCCTTGCGCGCACAGCGGC ACTGCATACTCCTATGCATGCTCCGGCCGCCACATGGTCAGTCACACCGT CATGTGCGCGCGCGCGGCGACGCGCCAAATCTACTCCTGTCGTAATGAAT ACTTGGAGTAACACTATGCATCGACATATATATATAAGCGTTTTTTCACA AACAAGAAGTTGACAACAACACATCTACATGTAACCTTTGCGCGTGCAGC GAGGACAGCGGCTTCGACGCGTAGTGGGGCGTCGTGAACATGCTTCGAGT AATCTTTCAAATAATCAAGAACTTGATGATTCAAAATTACACGTGATTTC ATGCCACGCGCACGCCCCGTATCTTTGCGTGCGTGCGCGCGCAGCGAGGA CAGCGGCTCCGACGCGCCGTGGGGCGTCGTGAGCATGCGACAAATCTACT CCTGTAGAAATGCGTATTACAATGCATACCTACAGGCATCATCTACAAGC AAGACCTTAATATATACATGTAAGTGCTTGTCCATAGAAGTGAATAAGAT CTTGACAATAACATAGCTTCATGTGACCGTTACGCGCGCAGCGAGGACTG CGGCTCCGACGCGCCGTGGGGCGTCGTGAGCATCAAGGCGCAGGACGTGG ACCGCGAGGTCCCCATGCAGCCCATCACCATGCTGCGCAACGCGCTCGGC AGGGACCAGGGCGGCAGCGGCGTGCCCCTCGACGCGGACGCGTACCGGGA GAGCGTCGCCTTCTGGAGCGAGCACGCGACGCTC
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Coding sequence (CDS) from alignment at Contig_57:84678..87011-

>mRNA_8561 ID=mRNA_8561|Name=jgi.p|Trimin1|144114|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=603bp|location=Sequence derived from alignment at Contig_57:84678..87011- (Tribonema minus UTEX_B_3156 )
ACTGCTACCATGGCATCCGACAACAACCGAGCCATCGTAATCGACCCTTT
CTGCCTTCGGCAGTTTAACGATGAAAGCTACACTGGAACAAAGATCCACT
ATTCACCAGAACAGTGCGAAGAGGAGATCAACAAGCATTTCCAAAAAAAT
CCTACCACGCACGATGGCTACGCCTCCTTCTGCAAACACATCTTCATGCC
GAACTTCATGGGCGTCGAGGGTGCCATAGTGCGCATCACGCCGGAGAACG
AGGCGCTGCTGCGCTCCGGCTACCAGGCGCGCACGCCCAAGGAGCTGGCG
GTGCTCGCGCGCTGGTTCCCGCGCGGCAGCGTGCCGCCGCCGCCCGCGCG
CTACCTGGACGTCATCCTCTACAGCCGCGACCAGATCCGCAAGGAGAACG
CCGCCATGGGCGAGGACTGCGGCTCCGACGCGCCGTGGGGCGTCGTGAGC
ATCAAGGCGCAGGACGTGGACCGCGAGGTCCCCATGCAGCCCATCACCAT
GCTGCGCAACGCGCTCGGCAGGGACCAGGGCGGCAGCGGCGTGCCCCTCG
ACGCGGACGCGTACCGGGAGAGCGTCGCCTTCTGGAGCGAGCACGCGACG
CTC
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