mRNA_8393 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A835Z2I0_9STRA (Caleosin related protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2I0_9STRA) HSP 1 Score: 516 bits (1330), Expect = 1.370e-185 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1
Query: 1 MSAEVTSERRQGQEAVDANVCVNRAPYDGMTAPETRAGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVYVNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREANKGWWYRWLKTSPKHD 738
MSAEVTSERRQGQEAVDANVCVNRAPYDGMTAPETRAGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVYVNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREANKGWWYRWLKTSPKHD
Sbjct: 1 MSAEVTSERRQGQEAVDANVCVNRAPYDGMTAPETRAGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVYVNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREANKGWWYRWLKTSPKHD 246
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A836CMG3_9STRA (Caleosin related protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG3_9STRA) HSP 1 Score: 198 bits (503), Expect = 2.860e-59 Identity = 101/189 (53.44%), Postives = 126/189 (66.67%), Query Frame = 1
Query: 127 KEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVYVNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREAN 693
+E MTA+QKHCA+FDRDGDG VSP DTY+ RALG NPL + + + LAP ++ WYPT V+L+ HR HGSDTGVYDE G F A F+ALF++YD DR D L+ +EF HRARAQR D +GQ AT+LEF TY LA E L+RETL+ YDG+ F+ +EA KAKRE++
Sbjct: 105 RESMTALQKHCAYFDRDGDGVVSPGDTYRGFRALGCNPLICAAAVVLVCLFLAPPTSPHWYPTWNVHLRTSHRSIHGSDTGVYDEDGEFDEAKFNALFEKYDLDR----------DDALNIREFLHRARAQRDHLDFFGQIATILEFSLTYVLAGENW-TLTRETLRTVYDGTFFDNVEARAKAKRESS 282
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: D8S1Z4_SELML (Uncharacterized protein n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S1Z4_SELML) HSP 1 Score: 158 bits (399), Expect = 1.240e-44 Identity = 90/197 (45.69%), Postives = 116/197 (58.88%), Query Frame = 1
Query: 118 GEGKE-EMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPT----VYVNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYG---QAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKR 684
GEG EMT +QKH A+FDR+GDG V P +TY RALGFN TS IN AL+ + + W P+ +YV KN+HR KHGSDTGVYD GRFVPAHF+ LF ++ Q KLS KE R+ R D +G ++A LE+G + L +E G S++++KG YDGSLF +E +K KR
Sbjct: 23 GEGSHAEMTPLQKHVAFFDRNGDGIVYPWETYTGFRALGFNVPTSFFAMVAINGALSYPTLESWIPSPRFPIYV--KNIHRAKHGSDTGVYDHEGRFVPAHFEQLFAKFAGTHQ----------DKLSLKEIMAMTRSNRDALDFFGWYARSAAKLEWGAAFQLVKDENGYASKQSIKGIYDGSLFYDVEIHLKTKR 207
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A1S2XXQ4_CICAR (peroxygenase isoform X1 n=2 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XXQ4_CICAR) HSP 1 Score: 158 bits (400), Expect = 2.090e-44 Identity = 92/239 (38.49%), Postives = 135/239 (56.49%), Query Frame = 1
Query: 4 SAEVTSERRQGQEAVDANVCVNRAPY--DGMTAPETR---AGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVY--VNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREANKG 699
+A VTS+RR D + + PY +TAP+T G +T +Q+HCA+FD+DG+G V P +TY RALGFN + S ++A IN+A++ + WYP++ + + N+H+ KHGSD+GVYD GR+VPA+ + +F +Y A + KL E ++ R FD +G AA E+G Y LA +E G LS+E ++ CYDGSLFE + A +EA G
Sbjct: 16 NAPVTSQRRVRS---DLETTIPK-PYMARALTAPDTTHPDGTTGHNHHNLTVLQQHCAFFDQDGNGIVYPWETYMGMRALGFNVIASFIMAIGINLAMSYPTLPHWYPSLLFPIYIHNMHKAKHGSDSGVYDTEGRYVPANLENIFSKY-----AHTVP-----DKLKLGEIWNMTEGNRNVFDPFGWAAAKFEWGVLYLLARDEDGFLSKEAVRRCYDGSLFEYCAKKNAANKEAKMG 240
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A6J1D8E4_MOMCH (probable peroxygenase 3 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1D8E4_MOMCH) HSP 1 Score: 157 bits (397), Expect = 7.370e-44 Identity = 83/215 (38.60%), Postives = 123/215 (57.21%), Query Frame = 1
Query: 88 MTAPETR---AGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVY--VNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREANKGWWYRWL 717
+TAP++ G M+ +Q+H A+FD+D DG + P DTY+ RALGFN + S FI+ AL+ A+ W P+ + ++++N+HR KHGSD+G YD GRFVPA + +F +Y R+ D KL+ +E +H +A R D +G A+ LE+G Y LA +E G LS+E ++ C+DGSLFE K + W RW+
Sbjct: 42 LTAPDSENINGTWGHKHNGMSVLQQHAAFFDQDNDGIIRPWDTYRGFRALGFNAIVSFFFMVFIHAALSYATLPTWIPSPFFPIHVRNIHRAKHGSDSGTYDTEGRFVPAQLENIFSKY---------ARTSAD-KLTLREIWHMTQANRDALDFFGWFASKLEWGALYVLAKDENGFLSKEAVRRCFDGSLFEYCAKIHKGAVDKTGEWILRWM 246
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A6A6K9Q6_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6K9Q6_HEVBR) HSP 1 Score: 156 bits (394), Expect = 1.570e-43 Identity = 80/196 (40.82%), Postives = 122/196 (62.24%), Query Frame = 1
Query: 88 MTAPETRA--GIGEGKEE-MTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPT----VYVNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFE 654
+ AP+T G E K ++ +Q+H A+FD+DG+G V P +TY RA+GFNP+ S ++A +N AL+ A+ GW+P+ +Y+N N+HR KHGSD+G YD GR++P HF+ +F +Y + KLS++E ++ QR FD +G A+ LE+G Y LA ++ G LS+E ++ C+DGSLFE
Sbjct: 41 LQAPDTENPHGTPEHKHHGLSVLQQHVAFFDQDGNGIVYPWETYTGCRAIGFNPILSLILAVAVNGALSYATLPGWFPSPLFPIYIN--NIHRAKHGSDSGTYDTEGRYMPVHFENVFSKY----------ANTVPDKLSFREIWNLTEGQRLAFDFFGWFASKLEWGILYILARDDEGYLSKEAIRRCFDGSLFE 224
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A059B288_EUCGR (Uncharacterized protein (Fragment) n=3 Tax=Myrtoideae TaxID=1699513 RepID=A0A059B288_EUCGR) HSP 1 Score: 154 bits (389), Expect = 3.120e-43 Identity = 78/194 (40.21%), Postives = 117/194 (60.31%), Query Frame = 1
Query: 88 MTAPET---RAGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVY--VNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFE 654
+ AP+T G +T +Q+HCA+FD+DG+G V P +TY RA+GFN + S ++A INV L+ + GW+P+ + + + N+H+ KHGSDTG YD GR+VPAH + +F +Y R+ D K++ E + R TFD++G A+ E+G Y LA +E G LS+E ++ CYDGSLF+
Sbjct: 5 LKAPDTDHPHGTPGHRSNNLTVLQQHCAFFDQDGNGIVYPWETYVGLRAIGFNMIASLIMAIGINVGLSYPTLPGWFPSPFFPIYIDNIHKDKHGSDTGTYDTEGRYVPAHLENMFSKY---------ARTVPD-KMTLGELWDMTEGNRNTFDIFGWVASKFEWGILYILARDEDGMLSKEAVRRCYDGSLFD 188
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A2C9W9G2_MANES (Uncharacterized protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9W9G2_MANES) HSP 1 Score: 154 bits (389), Expect = 8.090e-43 Identity = 80/206 (38.83%), Postives = 123/206 (59.71%), Query Frame = 1
Query: 88 MTAPETRAGIGEGKEE---MTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVY--VNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREA 690
+ AP+T G + M+ +Q+H A+FD+DG+G V P +TY RA+GFNP+ ++A IN+AL+ + GW+P+ + + N+HR KHGSD+G YD GR++P HF+ +F +Y + KLS +E ++ QR +DL+G A LE+G Y LA +E G LS+E ++ C+DGSLFE A++ + EA
Sbjct: 38 LQAPDTENPNGTPEHNHYGMSVLQQHVAFFDQDGNGIVYPWETYTGCRAIGFNPIFCLILAVVINLALSYPTLPGWFPSPLFPIYIHNIHRAKHGSDSGTYDTEGRYMPVHFENIFSKY----------ANTLPDKLSLREIWNMTEGQRLAYDLFGWFAAKLEWGALYILARDEEGYLSKEAIRRCFDGSLFEYC-AKMNRENEA 232
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: M5WJM8_PRUPE (Uncharacterized protein n=6 Tax=Prunus TaxID=3754 RepID=M5WJM8_PRUPE) HSP 1 Score: 153 bits (386), Expect = 2.690e-42 Identity = 77/194 (39.69%), Postives = 119/194 (61.34%), Query Frame = 1
Query: 88 MTAPETR---AGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVY--VNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFE 654
MTAP+T G M+ +Q+H A+FD+D DG + P +TY+ RALGFN + S + ++ A++ A+ W P+ Y ++++N+HR KHGSD+G YD GR++PA+ + LF +Y +C KL++KE +H +A R FD +G A+ LE+G Y LA +E G L++E ++ C+DGSLFE
Sbjct: 44 MTAPDTENINGTWGHKHCNMSVLQQHAAFFDQDKDGIIYPSETYRGFRALGFNVVASFIFMVLVHAAMSYATLPTWMPSPYFAIHIENIHRAKHGSDSGAYDTEGRYIPANLENLFSKY-------ACTVP---DKLTFKELWHMTQANRDAFDFFGWIASKLEWGVLYVLAKDEHGHLAKEAVRRCFDGSLFE 227
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A072VX57_MEDTR (Caleosin CLO1-1 n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A072VX57_MEDTR) HSP 1 Score: 153 bits (386), Expect = 2.690e-42 Identity = 79/208 (37.98%), Postives = 122/208 (58.65%), Query Frame = 1
Query: 88 MTAPET---RAGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVY--VNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREANK 696
+T P+T + G ++ +Q+HCA+FD+DG+G + P +TY RALGFN + S +A FIN+ L+ + W+P+ + + N+HR KHGSD+GVYD GRFVPA+F+ +F +Y A + KL+ KE ++ R D +G AA LE+GF Y LA +E G + +E ++ CYDG++FE + A ++ K
Sbjct: 42 LTTPDTSHPQGTPGNKHNNLSVLQQHCAFFDQDGNGIIYPWETYTGFRALGFNVIVSVFMAIFINLGLSYPTLPYWFPSPLFPIYIHNIHRAKHGSDSGVYDTEGRFVPANFENIFSKY-----ALTVP-----DKLTLKEIWNMTEGNRNALDPFGWAAGKLEWGFLYVLARDEDGFVPKEAVRRCYDGTIFEYCAKTIAANKDEAK 239 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8393 ID=mRNA_8393|Name=jgi.p|Trimin1|349109|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=741bp|location=Sequence derived from alignment at Contig_36:664250..666735- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGCGCCGAGGTCACTTCGGAGCGTCGCCAAGGCCAAGAAGCCGTGGAback to top protein sequence of jgi.p|Trimin1|349109 >Trimin1|349109|estExt_Genemark1.C_Ctg_360062 ID=Trimin1|349109|estExt_Genemark1.C_Ctg_360062|Name=jgi.p|Trimin1|349109|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=247bp MSAEVTSERRQGQEAVDANVCVNRAPYDGMTAPETRAGIGEGKEEMTAMQback to top mRNA from alignment at Contig_36:664250..666735- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8393 ID=mRNA_8393|Name=jgi.p|Trimin1|349109|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2486bp|location=Sequence derived from alignment at Contig_36:664250..666735- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_36:664250..666735- >mRNA_8393 ID=mRNA_8393|Name=jgi.p|Trimin1|349109|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=741bp|location=Sequence derived from alignment at Contig_36:664250..666735- (Tribonema minus UTEX_B_3156 )back to top |