mRNA_8393 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349109
Unique NamemRNA_8393
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A835Z2I0_9STRA (Caleosin related protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2I0_9STRA)

HSP 1 Score: 516 bits (1330), Expect = 1.370e-185
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1
Query:    1 MSAEVTSERRQGQEAVDANVCVNRAPYDGMTAPETRAGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVYVNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREANKGWWYRWLKTSPKHD 738
            MSAEVTSERRQGQEAVDANVCVNRAPYDGMTAPETRAGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVYVNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREANKGWWYRWLKTSPKHD
Sbjct:    1 MSAEVTSERRQGQEAVDANVCVNRAPYDGMTAPETRAGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVYVNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREANKGWWYRWLKTSPKHD 246          
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A836CMG3_9STRA (Caleosin related protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMG3_9STRA)

HSP 1 Score: 198 bits (503), Expect = 2.860e-59
Identity = 101/189 (53.44%), Postives = 126/189 (66.67%), Query Frame = 1
Query:  127 KEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVYVNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREAN 693
            +E MTA+QKHCA+FDRDGDG VSP DTY+  RALG NPL  +     + + LAP ++  WYPT  V+L+  HR  HGSDTGVYDE G F  A F+ALF++YD DR          D  L+ +EF HRARAQR   D +GQ AT+LEF  TY LA E    L+RETL+  YDG+ F+ +EA  KAKRE++
Sbjct:  105 RESMTALQKHCAYFDRDGDGVVSPGDTYRGFRALGCNPLICAAAVVLVCLFLAPPTSPHWYPTWNVHLRTSHRSIHGSDTGVYDEDGEFDEAKFNALFEKYDLDR----------DDALNIREFLHRARAQRDHLDFFGQIATILEFSLTYVLAGENW-TLTRETLRTVYDGTFFDNVEARAKAKRESS 282          
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: D8S1Z4_SELML (Uncharacterized protein n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S1Z4_SELML)

HSP 1 Score: 158 bits (399), Expect = 1.240e-44
Identity = 90/197 (45.69%), Postives = 116/197 (58.88%), Query Frame = 1
Query:  118 GEGKE-EMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPT----VYVNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYG---QAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKR 684
            GEG   EMT +QKH A+FDR+GDG V P +TY   RALGFN  TS      IN AL+  + + W P+    +YV  KN+HR KHGSDTGVYD  GRFVPAHF+ LF ++    Q           KLS KE     R+ R   D +G   ++A  LE+G  + L  +E G  S++++KG YDGSLF  +E  +K KR
Sbjct:   23 GEGSHAEMTPLQKHVAFFDRNGDGIVYPWETYTGFRALGFNVPTSFFAMVAINGALSYPTLESWIPSPRFPIYV--KNIHRAKHGSDTGVYDHEGRFVPAHFEQLFAKFAGTHQ----------DKLSLKEIMAMTRSNRDALDFFGWYARSAAKLEWGAAFQLVKDENGYASKQSIKGIYDGSLFYDVEIHLKTKR 207          
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A1S2XXQ4_CICAR (peroxygenase isoform X1 n=2 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XXQ4_CICAR)

HSP 1 Score: 158 bits (400), Expect = 2.090e-44
Identity = 92/239 (38.49%), Postives = 135/239 (56.49%), Query Frame = 1
Query:    4 SAEVTSERRQGQEAVDANVCVNRAPY--DGMTAPETR---AGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVY--VNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREANKG 699
            +A VTS+RR      D    + + PY    +TAP+T       G     +T +Q+HCA+FD+DG+G V P +TY   RALGFN + S ++A  IN+A++  +   WYP++   + + N+H+ KHGSD+GVYD  GR+VPA+ + +F +Y     A +        KL   E ++     R  FD +G AA   E+G  Y LA +E G LS+E ++ CYDGSLFE    +  A +EA  G
Sbjct:   16 NAPVTSQRRVRS---DLETTIPK-PYMARALTAPDTTHPDGTTGHNHHNLTVLQQHCAFFDQDGNGIVYPWETYMGMRALGFNVIASFIMAIGINLAMSYPTLPHWYPSLLFPIYIHNMHKAKHGSDSGVYDTEGRYVPANLENIFSKY-----AHTVP-----DKLKLGEIWNMTEGNRNVFDPFGWAAAKFEWGVLYLLARDEDGFLSKEAVRRCYDGSLFEYCAKKNAANKEAKMG 240          
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A6J1D8E4_MOMCH (probable peroxygenase 3 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1D8E4_MOMCH)

HSP 1 Score: 157 bits (397), Expect = 7.370e-44
Identity = 83/215 (38.60%), Postives = 123/215 (57.21%), Query Frame = 1
Query:   88 MTAPETR---AGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVY--VNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREANKGWWYRWL 717
            +TAP++       G     M+ +Q+H A+FD+D DG + P DTY+  RALGFN + S     FI+ AL+ A+   W P+ +  ++++N+HR KHGSD+G YD  GRFVPA  + +F +Y          R+  D KL+ +E +H  +A R   D +G  A+ LE+G  Y LA +E G LS+E ++ C+DGSLFE      K   +    W  RW+
Sbjct:   42 LTAPDSENINGTWGHKHNGMSVLQQHAAFFDQDNDGIIRPWDTYRGFRALGFNAIVSFFFMVFIHAALSYATLPTWIPSPFFPIHVRNIHRAKHGSDSGTYDTEGRFVPAQLENIFSKY---------ARTSAD-KLTLREIWHMTQANRDALDFFGWFASKLEWGALYVLAKDENGFLSKEAVRRCFDGSLFEYCAKIHKGAVDKTGEWILRWM 246          
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A6A6K9Q6_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6K9Q6_HEVBR)

HSP 1 Score: 156 bits (394), Expect = 1.570e-43
Identity = 80/196 (40.82%), Postives = 122/196 (62.24%), Query Frame = 1
Query:   88 MTAPETRA--GIGEGKEE-MTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPT----VYVNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFE 654
            + AP+T    G  E K   ++ +Q+H A+FD+DG+G V P +TY   RA+GFNP+ S ++A  +N AL+ A+  GW+P+    +Y+N  N+HR KHGSD+G YD  GR++P HF+ +F +Y           +    KLS++E ++    QR  FD +G  A+ LE+G  Y LA ++ G LS+E ++ C+DGSLFE
Sbjct:   41 LQAPDTENPHGTPEHKHHGLSVLQQHVAFFDQDGNGIVYPWETYTGCRAIGFNPILSLILAVAVNGALSYATLPGWFPSPLFPIYIN--NIHRAKHGSDSGTYDTEGRYMPVHFENVFSKY----------ANTVPDKLSFREIWNLTEGQRLAFDFFGWFASKLEWGILYILARDDEGYLSKEAIRRCFDGSLFE 224          
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A059B288_EUCGR (Uncharacterized protein (Fragment) n=3 Tax=Myrtoideae TaxID=1699513 RepID=A0A059B288_EUCGR)

HSP 1 Score: 154 bits (389), Expect = 3.120e-43
Identity = 78/194 (40.21%), Postives = 117/194 (60.31%), Query Frame = 1
Query:   88 MTAPET---RAGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVY--VNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFE 654
            + AP+T       G     +T +Q+HCA+FD+DG+G V P +TY   RA+GFN + S ++A  INV L+  +  GW+P+ +  + + N+H+ KHGSDTG YD  GR+VPAH + +F +Y          R+  D K++  E +      R TFD++G  A+  E+G  Y LA +E G LS+E ++ CYDGSLF+
Sbjct:    5 LKAPDTDHPHGTPGHRSNNLTVLQQHCAFFDQDGNGIVYPWETYVGLRAIGFNMIASLIMAIGINVGLSYPTLPGWFPSPFFPIYIDNIHKDKHGSDTGTYDTEGRYVPAHLENMFSKY---------ARTVPD-KMTLGELWDMTEGNRNTFDIFGWVASKFEWGILYILARDEDGMLSKEAVRRCYDGSLFD 188          
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A2C9W9G2_MANES (Uncharacterized protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9W9G2_MANES)

HSP 1 Score: 154 bits (389), Expect = 8.090e-43
Identity = 80/206 (38.83%), Postives = 123/206 (59.71%), Query Frame = 1
Query:   88 MTAPETRAGIGEGKEE---MTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVY--VNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREA 690
            + AP+T    G  +     M+ +Q+H A+FD+DG+G V P +TY   RA+GFNP+   ++A  IN+AL+  +  GW+P+    + + N+HR KHGSD+G YD  GR++P HF+ +F +Y           +    KLS +E ++    QR  +DL+G  A  LE+G  Y LA +E G LS+E ++ C+DGSLFE   A++  + EA
Sbjct:   38 LQAPDTENPNGTPEHNHYGMSVLQQHVAFFDQDGNGIVYPWETYTGCRAIGFNPIFCLILAVVINLALSYPTLPGWFPSPLFPIYIHNIHRAKHGSDSGTYDTEGRYMPVHFENIFSKY----------ANTLPDKLSLREIWNMTEGQRLAYDLFGWFAAKLEWGALYILARDEEGYLSKEAIRRCFDGSLFEYC-AKMNRENEA 232          
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: M5WJM8_PRUPE (Uncharacterized protein n=6 Tax=Prunus TaxID=3754 RepID=M5WJM8_PRUPE)

HSP 1 Score: 153 bits (386), Expect = 2.690e-42
Identity = 77/194 (39.69%), Postives = 119/194 (61.34%), Query Frame = 1
Query:   88 MTAPETR---AGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVY--VNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFE 654
            MTAP+T       G     M+ +Q+H A+FD+D DG + P +TY+  RALGFN + S +    ++ A++ A+   W P+ Y  ++++N+HR KHGSD+G YD  GR++PA+ + LF +Y       +C       KL++KE +H  +A R  FD +G  A+ LE+G  Y LA +E G L++E ++ C+DGSLFE
Sbjct:   44 MTAPDTENINGTWGHKHCNMSVLQQHAAFFDQDKDGIIYPSETYRGFRALGFNVVASFIFMVLVHAAMSYATLPTWMPSPYFAIHIENIHRAKHGSDSGAYDTEGRYIPANLENLFSKY-------ACTVP---DKLTFKELWHMTQANRDAFDFFGWIASKLEWGVLYVLAKDEHGHLAKEAVRRCFDGSLFE 227          
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Match: A0A072VX57_MEDTR (Caleosin CLO1-1 n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A072VX57_MEDTR)

HSP 1 Score: 153 bits (386), Expect = 2.690e-42
Identity = 79/208 (37.98%), Postives = 122/208 (58.65%), Query Frame = 1
Query:   88 MTAPET---RAGIGEGKEEMTAMQKHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASADGWYPTVY--VNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAFSCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEGGKLSRETLKGCYDGSLFERIEAEVKAKREANK 696
            +T P+T   +   G     ++ +Q+HCA+FD+DG+G + P +TY   RALGFN + S  +A FIN+ L+  +   W+P+    + + N+HR KHGSD+GVYD  GRFVPA+F+ +F +Y     A +        KL+ KE ++     R   D +G AA  LE+GF Y LA +E G + +E ++ CYDG++FE     + A ++  K
Sbjct:   42 LTTPDTSHPQGTPGNKHNNLSVLQQHCAFFDQDGNGIIYPWETYTGFRALGFNVIVSVFMAIFINLGLSYPTLPYWFPSPLFPIYIHNIHRAKHGSDSGVYDTEGRFVPANFENIFSKY-----ALTVP-----DKLTLKEIWNMTEGNRNALDPFGWAAGKLEWGFLYVLARDEDGFVPKEAVRRCYDGTIFEYCAKTIAANKDEAK 239          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349109 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z2I0_9STRA1.370e-185100.00Caleosin related protein-domain-containing protein... [more]
A0A836CMG3_9STRA2.860e-5953.44Caleosin related protein-domain-containing protein... [more]
D8S1Z4_SELML1.240e-4445.69Uncharacterized protein n=6 Tax=Selaginella moelle... [more]
A0A1S2XXQ4_CICAR2.090e-4438.49peroxygenase isoform X1 n=2 Tax=Cicer arietinum Ta... [more]
A0A6J1D8E4_MOMCH7.370e-4438.60probable peroxygenase 3 n=1 Tax=Momordica charanti... [more]
A0A6A6K9Q6_HEVBR1.570e-4340.82Uncharacterized protein n=1 Tax=Hevea brasiliensis... [more]
A0A059B288_EUCGR3.120e-4340.21Uncharacterized protein (Fragment) n=3 Tax=Myrtoid... [more]
A0A2C9W9G2_MANES8.090e-4338.83Uncharacterized protein n=1 Tax=Manihot esculenta ... [more]
M5WJM8_PRUPE2.690e-4239.69Uncharacterized protein n=6 Tax=Prunus TaxID=3754 ... [more]
A0A072VX57_MEDTR2.690e-4237.98Caleosin CLO1-1 n=1 Tax=Medicago truncatula TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_36contigContig_36:664250..666735 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349109|estExt_Genemark1.C_Ctg_360062
BRITEko00000,ko00001,ko01000
KEGG rclassRC01711
KEGG ReactionR09462,R09463
KEGG Pathwayko00073,map00073
KEGG koko:K17991
EC1.11.2.3
DescriptionCaleosin related protein
COG categoryS
Max annot lvl35493|Streptophyta
EggNOG OGs2CWG8@1|root,2RUFU@2759|Eukaryota,37T32@33090|Viridiplantae,3GBMN@35493|Streptophyta
Evalue7.59e-45
Seed ortholog3218.PP1S56_196V6.1
Hectar predicted targeting categoryother localisation
TranscriptId349431
TrackFilteredModels1
ProteinId349109
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349109gene_8393Tribonema minus UTEX_B_3156 geneContig_36 664250..666735 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349109Trimin1|349109|estExt_Genemark1.C_Ctg_360062Tribonema minus UTEX_B_3156 polypeptideContig_36 664250..666735 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8393_5exon_8393_5Tribonema minus UTEX_B_3156 exonContig_36 664250..664520 -
exon_8393_4exon_8393_4Tribonema minus UTEX_B_3156 exonContig_36 665033..665046 -
exon_8393_3exon_8393_3Tribonema minus UTEX_B_3156 exonContig_36 665378..665590 -
exon_8393_2exon_8393_2Tribonema minus UTEX_B_3156 exonContig_36 666258..666336 -
exon_8393_1exon_8393_1Tribonema minus UTEX_B_3156 exonContig_36 666572..666735 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8393CDS_8393Tribonema minus UTEX_B_3156 CDSContig_36 666572..666735 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8393 ID=mRNA_8393|Name=jgi.p|Trimin1|349109|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=741bp|location=Sequence derived from alignment at Contig_36:664250..666735- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGCGCCGAGGTCACTTCGGAGCGTCGCCAAGGCCAAGAAGCCGTGGA
TGCCAATGTGTGCGTGAACAGGGCACCTTATGATGGCATGACAGCGCCAG
AGACACGTGCGGGCATAGGGGAAGGGAAGGAGGAGATGACCGCGATGCAG
AAGCACTGCGCTTGGTTTGATCGCGACGGGGATGGCTATGTAAGCCCCAT
GGACACCTATAAGAGCTCCAGGGCGCTGGGATTCAATCCTCTGACATCGT
CTGTCATTGCCTTCTTCATCAACGTGGCCCTGGCCCCCGCGAGTGCTGAC
GGGTGGTACCCAACTGTCTACGTCAACTTGAAGAACGTGCACCGCTGCAA
GCACGGCTCCGACACAGGCGTATACGACGAGACTGGCCGCTTTGTGCCGG
CGCATTTCGATGCGCTCTTTGATCGCTACGATACAGACAGGCAAGCCTTC
TCATGCGAACGCAGCAGAAGGGACGGCAAGCTGAGCTGGAAGGAGTTCTT
CCACCGCGCGCGCGCGCAACGCGCAACCTTCGACCTCTACGGCCAGGCAG
CAACGCTCCTTGAATTCGGCTTCACGTACTGGCTTGCTGCAGAGGAGGGG
GGCAAACTCAGCAGGGAGACTCTCAAGGGCTGCTATGACGGCTCGCTCTT
TGAGAGGATCGAGGCGGAGGTGAAGGCCAAGAGGGAGGCCAACAAGGGGT
GGTGGTACCGCTGGCTGAAGACTTCCCCCAAGCACGACTGA
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protein sequence of jgi.p|Trimin1|349109

>Trimin1|349109|estExt_Genemark1.C_Ctg_360062 ID=Trimin1|349109|estExt_Genemark1.C_Ctg_360062|Name=jgi.p|Trimin1|349109|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=247bp
MSAEVTSERRQGQEAVDANVCVNRAPYDGMTAPETRAGIGEGKEEMTAMQ
KHCAWFDRDGDGYVSPMDTYKSSRALGFNPLTSSVIAFFINVALAPASAD
GWYPTVYVNLKNVHRCKHGSDTGVYDETGRFVPAHFDALFDRYDTDRQAF
SCERSRRDGKLSWKEFFHRARAQRATFDLYGQAATLLEFGFTYWLAAEEG
GKLSRETLKGCYDGSLFERIEAEVKAKREANKGWWYRWLKTSPKHD*
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mRNA from alignment at Contig_36:664250..666735-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8393 ID=mRNA_8393|Name=jgi.p|Trimin1|349109|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2486bp|location=Sequence derived from alignment at Contig_36:664250..666735- (Tribonema minus UTEX_B_3156 )
ATGAGCGCCGAGGTCACTTCGGAGCGTCGCCAAGGCCAAGAAGCCGTGGA TGCCAATGTGTGCGTGAACAGGGCACCTTATGATGGCATGACAGCGCCAG AGACACGTGCGGGCATAGGGGAAGGGAAGGAGGAGATGACCGCGATGCAG AAGCACTGCGCTTGGTAAGTTGCCGTGGGGATGCTGCAGCAATGGTCCTT CCAGCCATGTGTTCCACAATGCTTTTTCGTAGGAAGGCGTGACGGCAGTG AGGAATTCGCTTGATGAGAATGTGATGTGCTTCTCTCGCGAGCAGCCGAT AAGGCTATCAATATGTGAACTTTTTGTCAACGTTGTCAAGTCGACTTTCG GGCACACTGTGCAAACTGCATCCGCTGCTGTGTCGAACCCATCAAACAGG TTTGATCGCGACGGGGATGGCTATGTAAGCCCCATGGACACCTATAAGAG CTCCAGGGCGCTGGGATTCAATCCTCTGGTAAGAACCGCAATTGTTGACA AACATAAATTTTAGGTCAGGAAGGGGTAAGAGGAATGGCAGGAGATAACT GCTGGCACCAACATGTCACTCTGATATGCCCAATGACAAAGTGAGTCTTT GTTGCCGCTGTACGAGTTTGAAATTGATGTGCTGATGGAGCTGCTGTGCT TGGAGGCCAATGCTTACTCAAGCTGATTGCACATGAGCTTTTCATCGCAA ATGAGTGCACCCAGAGACTCTGAGCCTGAGTTGGCCACCATGTCATCGTG TGCAGTGTTGGACCATCGCTTTCACCACAGCAAAAGACGCACACGCCGTC ATACCAAACGTCAAACTCGACATGGTGCATATCAATCAAACGTAAAAACA TTGCAATAGGGTTATCTTTATTCTGTTTTGGTTGCCCTGCATGCGCACAC AGATGCAGAGCATCGTCCCATGTGTACCACAACCACATTAACACAAAACC AAGCCTCACAAGTGAACTGTGGTGACGCTGGCTTTACCACTGAGCTAAAA GGTTGTGCACACTTCAAGTTAGCAGGGTAGCCGCCCATAATACTAACCCT AACCCTAGTCCGGGAGGCCAGGACACCACATTCATTTGTTTGTGTGCAGA ACCTCAGTCCAGGACAATGCATTGCTATTGCTTCTTCCCCCACAGACATC GTCTGTCATTGCCTTCTTCATCAACGTGGCCCTGGCCCCCGCGAGTGCTG ACGGGTGGTACCCAACTGTCTACGTCAACTTGAAGAACGTGCACCGCTGC AAGCACGGCTCCGACACAGGCGTATACGACGAGACTGGCCGCTTTGTGCC GGCGCATTTCGATGCGCTCTTTGATCGCTACGATACAGACAGGCAAGCCT TCTCATGCGTACGCCACCAGCTGTTACAAAGTCAACTACTTTCAAGTGTG TGAAGTTTGTGCACTGTTGTCACCTGTCCCGCGGTATTGTTGTCATGGAG TATCTTAATCGTGGTTTGATTGAAGTTTCTGATGGGTATATATGTATACT CGTCAGCAAAACCTGATTTTGGACCACGTAGCAAGATTGGTGTGCTGGGA AGGTCCTTCAGGATACCTGGTAAATCAGCATGTACAGCAAGTCAGAGACA CAAAGCGGTTGTGTATGCAGTCAAAGCAATGAAGCTGGTAAAAGTCAGCG TGTGTGTCATAATGTAGCAGTCCCCCATTTGACTGCAAGGAACGCAGCAG AAGGTGACGCAGGTGCCGTTGATATGCTGCGCTACTCAGTATCAGTCTGG CCGTTGACAACCCATACATATGTACTCACAGCAACACCCTCAGTCCTCAC TCAAAGTGTAAATCTAACACTACGTAGCTGTGTTAGCAGCACGCAATCAA CTTCTTCGTGTCAGTTGGCGCTGTCATGTCGACAAAAATGGGTATTCATG TTGCCAACATCTGCCAGCTGTTGATAATGTAGGCCTGTTGTGAAGTGGCT ATTGCAACTTTGATTCGAAGCTGAGTAATTTTATATGCAGGAGCTGTTTC ATCACCGCTCAAGCACAAGCATGTTGCCTTTTGACACCTAGAGGCAGGCT GCAGCAACACTCAAGTGAAACCTGCGCAGCAATAAGTTCCAGCTGCTGAG CTGCAGCTACATGCCCCCCAGCTGCCCCCTCGCAATCCTTAGTCGCCAGC CTCTTGGTCAGCCCCATCCCTTTACAATACTGAGTGCATTTCTCGCAATC CCTTTGTTCTTGCAGGGACGGCAAGCTGAGCTGGAAGGAGTTCTTCCACC GCGCGCGCGCGCAACGCGCAACCTTCGACCTCTACGGCCAGGCAGCAACG CTCCTTGAATTCGGCTTCACGTACTGGCTTGCTGCAGAGGAGGGGGGCAA ACTCAGCAGGGAGACTCTCAAGGGCTGCTATGACGGCTCGCTCTTTGAGA GGATCGAGGCGGAGGTGAAGGCCAAGAGGGAGGCCAACAAGGGGTGGTGG TACCGCTGGCTGAAGACTTCCCCCAAGCACGACTGA
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Coding sequence (CDS) from alignment at Contig_36:664250..666735-

>mRNA_8393 ID=mRNA_8393|Name=jgi.p|Trimin1|349109|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=741bp|location=Sequence derived from alignment at Contig_36:664250..666735- (Tribonema minus UTEX_B_3156 )
ATGAGCGCCGAGGTCACTTCGGAGCGTCGCCAAGGCCAAGAAGCCGTGGA
TGCCAATGTGTGCGTGAACAGGGCACCTTATGATGGCATGACAGCGCCAG
AGACACGTGCGGGCATAGGGGAAGGGAAGGAGGAGATGACCGCGATGCAG
AAGCACTGCGCTTGGTTTGATCGCGACGGGGATGGCTATGTAAGCCCCAT
GGACACCTATAAGAGCTCCAGGGCGCTGGGATTCAATCCTCTGACATCGT
CTGTCATTGCCTTCTTCATCAACGTGGCCCTGGCCCCCGCGAGTGCTGAC
GGGTGGTACCCAACTGTCTACGTCAACTTGAAGAACGTGCACCGCTGCAA
GCACGGCTCCGACACAGGCGTATACGACGAGACTGGCCGCTTTGTGCCGG
CGCATTTCGATGCGCTCTTTGATCGCTACGATACAGACAGGCAAGCCTTC
TCATGCGAACGCAGCAGAAGGGACGGCAAGCTGAGCTGGAAGGAGTTCTT
CCACCGCGCGCGCGCGCAACGCGCAACCTTCGACCTCTACGGCCAGGCAG
CAACGCTCCTTGAATTCGGCTTCACGTACTGGCTTGCTGCAGAGGAGGGG
GGCAAACTCAGCAGGGAGACTCTCAAGGGCTGCTATGACGGCTCGCTCTT
TGAGAGGATCGAGGCGGAGGTGAAGGCCAAGAGGGAGGCCAACAAGGGGT
GGTGGTACCGCTGGCTGAAGACTTCCCCCAAGCACGACTGA
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