mRNA_8198 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349999
Unique NamemRNA_8198
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A836CBU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU1_9STRA)

HSP 1 Score: 918 bits (2373), Expect = 0.000e+0
Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 1
Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKERGQVTRTEQDLELLSTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAELILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLPFADLDATSWGTPRPQTKVPRVFPADRGPDFTYGRDRTESRTVRTFFLSASAHRVELDGSGAREQPRWTAATAAAHQPDALAKKLRDFNQVYGSFVSEHPHPTDVPDYRLVPPASVTSGCMVSTWEPRDELDCCASFTDDDEVLCTAYERVVWTVAGVHPDSGRVTLVCGGGAGPNGEVRPNKDFEAADWKEAWITG 1353
            MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKERGQVTRTEQDLELLSTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAELILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLPFADLDATSWGTPRPQTKVPRVFPADRGPDFTYGRDRTESRTVRTFFLSASAHRVELDGSGAREQPRWTAATAAAHQPDALAKKLRDFNQVYGSFVSEHPHPTDVPDYRLVPPASVTSGCMVSTWEPRDELDCCASFTDDDEVLCTAYERVVWTVAGVHPDSGRVTLVCGGGAGPNGEVRPNKDFEAADWKEAWITG
Sbjct:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKERGQVTRTEQDLELLSTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAELILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLPFADLDATSWGTPRPQTKVPRVFPADRGPDFTYGRDRTESRTVRTFFLSASAHRVELDGSGAREQPRWTAATAAAHQPDALAKKLRDFNQVYGSFVSEHPHPTDVPDYRLVPPASVTSGCMVSTWEPRDELDCCASFTDDDEVLCTAYERVVWTVAGVHPDSGRVTLVCGGGAGPNGEVRPNKDFEAADWKEAWITG 451          
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A835ZEL6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEL6_9STRA)

HSP 1 Score: 426 bits (1096), Expect = 4.350e-138
Identity = 230/280 (82.14%), Postives = 239/280 (85.36%), Query Frame = 1
Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKER---GQVTRTEQ-------DLELL-STYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
            MADLVERLINRFGQAAVN AQ HEPSHT RLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL+IAQTLQ+AADYVGK     G   R  +       D+  + STYIQVHFQRRRLAIT+WALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVH LAELVTTYAGNDLHGELQARL+QLGFRGAEL              ILDICETVRHLP+GDSDASKRRLLAQ QQLYVET+RTDYQELMSG FEQFPNDAAARREN DAVWGLLP
Sbjct:    1 MADLVERLINRFGQAAVNIAQGHEPSHTHRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKALQAPGAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAITHWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGELQARLDQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQPQQLYVETDRTDYQELMSGLFEQFPNDAAARRENTDAVWGLLP 280          
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A835YXL0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXL0_9STRA)

HSP 1 Score: 419 bits (1076), Expect = 1.380e-135
Identity = 226/299 (75.59%), Postives = 238/299 (79.60%), Query Frame = 1
Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK------ERGQVTRTEQDLELLS------------------------TYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
            MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILG DQGV+LRH TVSCSLAKVLHRHPSLDI QTLQ+AADYVGK      +R Q  R   +L+ L                         TYI+VHFQRRRLAITYWALFQALRAHI NDDDDPDTQVDMTVRPFTRAVH LAELVTTYAGNDLHG LQARLNQLGFRGAEL              ILDICETVRHLP+GDSD+SKRRLLAQLQQLYVET+RTDYQ+LMSG FEQFP+DA ARRE+RDAVWGLLP
Sbjct:    1 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGTDQGVQLRHNTVSCSLAKVLHRHPSLDITQTLQDAADYVGKLPASTHQRFQDLRHNSNLQALQAPWAPWRLHEVFLYVAKDMATVAKTYIEVHFQRRRLAITYWALFQALRAHITNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGGLQARLNQLGFRGAELDDDGDVQEGADHLKILDICETVRHLPDGDSDSSKRRLLAQLQQLYVETDRTDYQDLMSGLFEQFPDDATARREHRDAVWGLLP 299          
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A836CQS9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQS9_9STRA)

HSP 1 Score: 403 bits (1036), Expect = 3.370e-129
Identity = 230/355 (64.79%), Postives = 242/355 (68.17%), Query Frame = 1
Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELL------------------------STYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
            MADLVERLINRFGQAAVNTAQ HEPSHTR+LHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL+IA+TLQ+A DYVGK                                                              +R Q  R   +L+ L                        STYIQVHFQRRRLAIT+WALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVH LAELVT YAGNDLHGELQARLNQLGFRGAEL              ILDICETVRHLP+GDSDASKRRLLAQLQQLYVET+RTDYQ+LMS  FEQFP+DAAARRENRDAVWGLLP
Sbjct:  232 MADLVERLINRFGQAAVNTAQGHEPSHTRQLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIARTLQDATDYVGKVRHLASLLANYICTWKLDLGQPFPDATQRFFMECLTCYVQGAGAGYTNGAGPGAAQLPPSTLQRFQDLRNNSNLQALQAPGAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAITHWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTIYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDRTDYQDLMSELFEQFPDDAAARRENRDAVWGLLP 586          
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A835Z9D2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D2_9STRA)

HSP 1 Score: 404 bits (1037), Expect = 2.740e-127
Identity = 230/352 (65.34%), Postives = 240/352 (68.18%), Query Frame = 1
Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELLS------------------------TYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWG 756
            MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL+IAQTLQ+AADYVGK                                                              +R Q  R   +L+ L                         TY +VHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVH LAELVTTYAGNDLHGELQARLNQLGFRGAEL              ILDICETVRHLP+GDSDASKRRLLAQLQQLYVET+RTDYQ+LMSG FEQFP+DAAARRENRDAVWG
Sbjct:    1 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTRKLDLGQPFPDATQRFYMECLTCYVQGAGAGYTQGAGPGAAQLPPSTLQRFQDLRHNSNLQALQATWPPWRLHEVFLYVAKDMATVAKTYTEVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDNDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDRTDYQDLMSGLFEQFPDDAAARRENRDAVWG 352          
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A836CNV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV6_9STRA)

HSP 1 Score: 412 bits (1058), Expect = 5.180e-127
Identity = 239/378 (63.23%), Postives = 250/378 (66.14%), Query Frame = 1
Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELL------------------------STYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLPFADLDATSWGTPRPQTKVPRVFP 834
            MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL+IAQTLQ+AADYVGK                                                              +R Q  R   +L+ L                        STYIQVHFQRRRLAIT+WALF ALRAHIMNDDDDPDTQVDMTVRPFTRAVH LAELVTTYAGNDLHGELQARLNQLGFRGAEL              ILDICETVRHLP+GDSDASKRRLLAQLQQLYVET+RTDYQ+LMSG FEQFP+DAAARRENRDAVWGLLP           P+    VPR  P
Sbjct:  744 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTWKLDLGQPFPDATQRFFMECLTCYVQGAGAGYTNGAGPGAAQLPPSTLQRFQDLRNNSNLQALQAPGAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAITHWALFHALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDRTDYQDLMSGLFEQFPDDAAARRENRDAVWGLLPVP---------PKLTAPVPRFKP 1112          
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A835YWJ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ2_9STRA)

HSP 1 Score: 402 bits (1033), Expect = 3.380e-125
Identity = 234/355 (65.92%), Postives = 241/355 (67.89%), Query Frame = 1
Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKER-----------------GQ------------------------VTRTE---------------QDL------------------------------ELLSTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
            MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL+IAQTLQ+AADYVGK R                 GQ                         T  E               QDL                                  TYI+VHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRP TRAVH LAELVTTYAGNDLHGELQARLNQLGFRGAEL              ILDICETVRHLP+GDSDASKRR LAQLQQLYVET+R DYQ+LMSG FEQFP+DAAARRENRDAVWGLLP
Sbjct:    1 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTWKLDLGQPFPDATQRFFMECLTCYVQGAGAGYTNGEGPGAAQLPPSTLQRFQDLCHNSNLQALQATWPPWRLHEVFLYVAKDMATAAKTYIEVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPLTRAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRHLAQLQQLYVETDRADYQDLMSGLFEQFPDDAAARRENRDAVWGLLP 355          
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A835YJ56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ56_9STRA)

HSP 1 Score: 406 bits (1043), Expect = 1.010e-123
Identity = 234/356 (65.73%), Postives = 243/356 (68.26%), Query Frame = 1
Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELL------------------------STYIQVHFQRRRLAI-TYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
            MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL++AQTLQ+AADYVGK                                                              +R Q  R   +L+ L                        STYIQVHFQRRRLAI TYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVH LAELVTTYAGNDLHGE QARLNQLGFRGAEL              ILDICETVRHLP+GDSDASK RLLAQLQQLYVET+RTDYQELMSG FEQFP+DAAARRENRDAVWGLLP
Sbjct:  277 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEMAQTLQDAADYVGKVRHLASLLANYICTWKLHHGQPFPDATQRYFMECLTCYVQGAGAAYTNGAGPGAAQLPASTLQRFQDLRNNSNLQALQATWAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAIITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGEPQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKHRLLAQLQQLYVETDRTDYQELMSGLFEQFPDDAAARRENRDAVWGLLP 632          
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A835Z8U0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U0_9STRA)

HSP 1 Score: 380 bits (975), Expect = 4.290e-120
Identity = 227/390 (58.21%), Postives = 239/390 (61.28%), Query Frame = 1
Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELLS------------------------TYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTR-----------------------------------AVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
            MADLVERLINRFGQAAVNTAQEHEP HTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCS+AKVLHRHPSL+IAQTLQ+AADYVGK                                                              +R Q  R   +L+ L                         TYI+VHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFT                                    AVH LAELVTTYAGNDLHGELQARLNQLGFRGAEL              ILDICETVRHLP+GDSDASKRRLLAQLQQLYVET+ TDYQ+LMS  F Q+P+D AARRENRDAVWGLLP
Sbjct:    1 MADLVERLINRFGQAAVNTAQEHEPLHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSIAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTWKLDLGQPFPDATQRFFMECLTCYVQGAGAGYTQGAGPGAAQLPPSTLQRFQDLRHNSNLQALQATWPPWRLHEVFLYVAKDIATVAKTYIEVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTSQAWMWPASTVRATVLVCHPTYELPLAKLIARVAPTAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGANCLMILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDCTDYQDLMSELFGQYPDDTAARRENRDAVWGLLP 390          
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A835Z9G0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G0_9STRA)

HSP 1 Score: 332 bits (852), Expect = 3.390e-108
Identity = 199/341 (58.36%), Postives = 207/341 (60.70%), Query Frame = 1
Query:    1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELLS------------------------TYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAELILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
            MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVL RHPSLDIAQTLQEAA YVGK                                                              +R Q  R   +L+ L                         TYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTR   G   L                           ILDICETV H P+GDSDASKRRLLAQLQQLYVET+RTDY++LM G FEQFP+DAAARRENRDAVWGLLP
Sbjct:    1 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLQRHPSLDIAQTLQEAAVYVGKVRHLASLLANYICTWKLHHGQPFPDATQRFYMECSTCFVKGAGAGYTNGAGPGAAQVPPSTLQRFQYLRHNSNLQALQATWPPWRLHEVFLYVAKDMATVAKTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRRAEGADYLK--------------------------ILDICETVHHSPDGDSDASKRRLLAQLQQLYVETDRTDYRDLMPGLFEQFPDDAAARRENRDAVWGLLP 315          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBU1_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZEL6_9STRA4.350e-13882.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YXL0_9STRA1.380e-13575.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQS9_9STRA3.370e-12964.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9D2_9STRA2.740e-12765.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CNV6_9STRA5.180e-12763.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YWJ2_9STRA3.380e-12565.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YJ56_9STRA1.010e-12365.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z8U0_9STRA4.290e-12058.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z9G0_9STRA3.390e-10858.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_53contigContig_53:557557..562596 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349999|estExt_Genemark1.C_Ctg_530071
Hectar predicted targeting categoryother localisation
TranscriptId350321
TrackFilteredModels1
ProteinId349999
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349999gene_8198Tribonema minus UTEX_B_3156 geneContig_53 557557..562596 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349999Trimin1|349999|estExt_Genemark1.C_Ctg_530071Tribonema minus UTEX_B_3156 polypeptideContig_53 557557..562596 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8198_1exon_8198_1Tribonema minus UTEX_B_3156 exonContig_53 557557..557820 +
exon_8198_2exon_8198_2Tribonema minus UTEX_B_3156 exonContig_53 557942..557988 +
exon_8198_3exon_8198_3Tribonema minus UTEX_B_3156 exonContig_53 558684..558824 +
exon_8198_4exon_8198_4Tribonema minus UTEX_B_3156 exonContig_53 559370..559475 +
exon_8198_5exon_8198_5Tribonema minus UTEX_B_3156 exonContig_53 559516..559722 +
exon_8198_6exon_8198_6Tribonema minus UTEX_B_3156 exonContig_53 560673..560832 +
exon_8198_7exon_8198_7Tribonema minus UTEX_B_3156 exonContig_53 562166..562596 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8198CDS_8198Tribonema minus UTEX_B_3156 CDSContig_53 557557..557820 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8198 ID=mRNA_8198|Name=jgi.p|Trimin1|349999|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1356bp|location=Sequence derived from alignment at Contig_53:557557..562596+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGACCTGGTCGAGAGGCTCATCAACAGGTTCGGGCAGGCGGCGGT
GAATACTGCCCAGGAGCACGAGCCCTCACACACGCGCCGGCTGCACGAGA
CTCTGTTGCGGACCTTCGAGCGAAGGCGACGCATCCTTGGAGCGGATCAA
GGCGTAAAGCTCAGGCACAAGACCGTCTCTTGCAGCCTTGCAAAGGTCCT
GCATCGGCACCCTAGCCTTGACATCGCCCAGACGCTCCAGGAGGCTGCAG
ATTACGTGGGGAAGGAGCGGGGGCAGGTTACACGAACGGAGCAGGACCTG
GAGCTGCTCAGCACGTACATACAGGTGCACTTCCAGCGGCGGCGCCTGGC
CATCACGTACTGGGCCCTGTTCCAAGCCCTGCGGGCGCACATCATGAACG
ACGATGATGACCCTGATACTCAAGTCGACATGACTGTGCGCCCGTTCACC
AGGGCTGTACATGGCCTGGCTGAGCTGGTGACCACCTATGCCGGCAATGA
CTTGCACGGGGAGCTGCAGGCACGCCTCAACCAGCTGGGCTTCAGGGGCG
CAGAGCTGATCCTGGACATCTGCGAGACGGTGCGCCACCTGCCCAACGGC
GACAGCGACGCTAGCAAGCGCCGGCTTTTGGCACAGCTGCAGCAGCTCTA
TGTGGAGACCAACCGCACAGACTACCAGGAGCTGATGTCGGGGTTTTTCG
AGCAGTTTCCAAATGATGCCGCAGCGCGCCGCGAGAACAGGGACGCTGTG
TGGGGCCTGCTGCCGTTTGCGGATCTGGACGCTACGTCCTGGGGCACGCC
CCGCCCGCAGACAAAGGTTCCTCGGGTTTTCCCTGCTGACAGGGGCCCGG
ACTTCACATATGGCAGGGACAGAACGGAATCCAGGACCGTTCGGACCTTC
TTCCTGTCAGCCTCGGCGCACCGAGTCGAGCTGGATGGGTCAGGTGCACG
TGAGCAACCACGCTGGACGGCAGCCACAGCAGCAGCACACCAGCCTGACG
CTCTTGCGAAGAAGCTGAGGGACTTCAATCAGGTGTATGGTTCGTTCGTC
TCGGAGCATCCGCACCCAACTGACGTGCCGGATTATCGGTTGGTGCCGCC
GGCCTCAGTCACCAGCGGTTGTATGGTGTCAACGTGGGAACCCCGAGATG
AGCTAGACTGCTGCGCGTCCTTCACCGACGATGACGAGGTCCTATGCACC
GCATACGAACGGGTCGTGTGGACGGTGGCTGGGGTTCATCCTGACTCCGG
TCGAGTCACGCTGGTCTGTGGCGGCGGCGCAGGTCCTAATGGTGAGGTCC
GTCCCAACAAGGACTTCGAGGCGGCGGATTGGAAGGAGGCATGGATAACT
GGCTAG
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protein sequence of jgi.p|Trimin1|349999

>Trimin1|349999|estExt_Genemark1.C_Ctg_530071 ID=Trimin1|349999|estExt_Genemark1.C_Ctg_530071|Name=jgi.p|Trimin1|349999|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=452bp
MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQ
GVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKERGQVTRTEQDL
ELLSTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFT
RAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAELILDICETVRHLPNG
DSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAV
WGLLPFADLDATSWGTPRPQTKVPRVFPADRGPDFTYGRDRTESRTVRTF
FLSASAHRVELDGSGAREQPRWTAATAAAHQPDALAKKLRDFNQVYGSFV
SEHPHPTDVPDYRLVPPASVTSGCMVSTWEPRDELDCCASFTDDDEVLCT
AYERVVWTVAGVHPDSGRVTLVCGGGAGPNGEVRPNKDFEAADWKEAWIT
G*
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mRNA from alignment at Contig_53:557557..562596+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8198 ID=mRNA_8198|Name=jgi.p|Trimin1|349999|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5040bp|location=Sequence derived from alignment at Contig_53:557557..562596+ (Tribonema minus UTEX_B_3156 )
ATGGCGGACCTGGTCGAGAGGCTCATCAACAGGTTCGGGCAGGCGGCGGT GAATACTGCCCAGGAGCACGAGCCCTCACACACGCGCCGGCTGCACGAGA CTCTGTTGCGGACCTTCGAGCGAAGGCGACGCATCCTTGGAGCGGATCAA GGCGTAAAGCTCAGGCACAAGACCGTCTCTTGCAGCCTTGCAAAGGTCCT GCATCGGCACCCTAGCCTTGACATCGCCCAGACGCTCCAGGAGGCTGCAG ATTACGTGGGGAAGGTGCGGCATCTGGCCTCCTTGCTGGCCAATTACATC TGCACGTGGAAGCTGCATCACGGACAGCCCTTCCCCGACGCCACGCAGCG CTTATTTATGGAGTGTTTAACCTGTTCTGTGCAAGGAGCGGGGGCAGGTT ACACGAACGGAGCAGGACCTGGAGCTGCTCAGGTACAAGAATACAGTCTT CACTTCTTCGCAGCTTGACTTTGAACCGATATGGTGCAGTAGGCATCACC ATTCGCTGCGCATCAACACAACAACAGTGACTGTTGCTGCATTTAGAAAA ATCGCATGCTGCTGCCTCAGGCGCAAGCTATAACTTTGGCCAGCGTTGGA ACTCACGCAGGACTTTAGCAGTGTCGCATGACTTGTTGTTCGTCCATGGC TCACGACCTTATCTGAGAAGGATGTGCATGGTGAGGCATTCATGCATGCT TGTCAAACAGTGTCGTGAGGGCAGCCTTCCATCCAGCACATGATGACCCT GTCGACCAGTATGCCAACAGCCTCACAGTACCTGAATGACTTGCGCAACA TGCCTGGAGATATCACCTGTGCCAGTGGTACTGACACTCGCATTGACCAG AATGCAAACCTCAACCAATCTGCGATCATCATAGCTGGCACTCTGGCTAC AGCGCCAAGTCAACACATAAAAGCCAGTGCGAGGGGGTCAACTCGTTCAT GTGGAGTGACATGTGCTCCTTGTGCGCTTGTTGTTGCGCAGTTGCCCGCC TCGACGCTTCAACAATTCCAGGACCTGCGCCACAACAGCAATCTGCAGGC CCTGCAGGCCACCTGGGCGCCCTGGTGCCTGCATGAGGTCTCCTCTATGT GGCCAAGGACATGACAACGGTTGCCAGCACGTACATACAGGTGCACTTCC AGCGGCGGCGCCTGGCCATCACGTACTGGGCCCTGTTCCAAGCCCTGCGG GCGCACATCATGAACGACGATGATGACCCTGATACTCAAGTCGACATGAC TGTGCGCCCGTTCACCAGGTGGGCGGCAAATGCTTAGTTAAATTCAGCCC TGTATTCACAAGGTACAATGTGCATAGATTTGCAAGCAGTTTCTGGCATA CTCTCATCAGCACCATAGCGTTTGTGCAAGACTTAGTAATGCGGGTGTCT CAACGGCTCACATCTCTGCTGTTTTTGTGGTGCACTATGTTCGGCGTGAT GTAACCTGGACAGAGGGCTGGGTGCAGGCTGTATTCACACTTGCGCCAGC CCTGCATGGCAGAGGTGGAGATGGCAGCAGGCAGCTGTTTTTGGCATTAA GCAAAGTGGTATTGGACAACTTCAACTTACTTGGTGGTTCAGCCACACGC TGCATGTATGCGCCTTATTCTGTCTCTACATGCAAGAAAGTTGATGTGTG ATGGCCTGCTCAGAATACTCAACCCGCAGTCTGGATATTCTTGACTTGGC CCTTCAGCCAGGCTTGGATGTGGTCTTCAAGTGCAATTAGAGTGAACAGT GCTTGTTTGCCACACAACTTGCGGACTCCCCCTTCTCAATTTGATTGCAC GTGATGCTCCCAGGGCTGTACATGGCCTGGCTGAGCTGGTGACCACCTAT GCCGGCAATGACTTGCACGGGGAGCTGCAGGCACGCCTCAACCAGCTGGG CTTCAGGGGCGCAGAGCTGGTGATGATGGAGACGTGCAGGAGGGCGCCGA TTCCTCAAGATCCTGGACATCTGCGAGACGGTGCGCCACCTGCCCAACGG CGACAGCGACGCTAGCAAGCGCCGGCTTTTGGCACAGCTGCAGCAGCTCT ATGTGGAGACCAACCGCACAGACTACCAGGAGCTGATGTCGGGGTTTTTC GAGCAGTTTCCAAATGATGCCGCAGCGCGCCGCGAGAACAGGGACGCTGT GTGGGGCCTGCTGCCGGTCCCTCCAAAGCTTACTGCCCCCCTCCCCCGCT TCAAGCCCAGCCGGCGTTCATCCGCATCGACCGCACTTGAATTGCCAGCA CGCTGCCGCATCTGTCTCATAGCTGTTGTTCTCAGGTCCTTCGCCCTTGC TTGAAGTTCACTGACCAAAGTTGACAGGACTACGGCGCACGCGTGCATAT GGGTGCTCTAGGGGCTGCAGGCATAGCCTCGCTGCGTAGCGCCTGTGGAC AGGATGAGCACGCTTAGCCTACTAGTACTGTAGTAGAACACTACATACAG ATGTCTTATTAGCCTAGCTGCTGGTAGTAGCACACGCAGATGTCCTATCA GCGCGCTTAACCTGTCACTCTGTCAACTGTTGGTGCGACAATCATGATCT CATCACTCTAATATGCGTGATATGGTGATCACTGAGCGGCTGTCTGAGTC AGTATCATATGCTGAAACCTGGCAGTCACAGGCAAATGTGATGATTGAGA TTGTCATATGCTCAAACCGGTTGGTTGGTTCCATGCTTGCATACTTTTAG TATGCATCCATCGCATCGCAGCGTAACATTGGTGACGGTGTCTCACCTTG ATGTGTTTTCGTTGTCGCTGTGTCATGCTGTGGCAGCGGTAGGCAGAAGT GTGCAAAAATGCATGTTGAGCAATGTGGCAATGGTTGAAGTTAAACTTCA AGTTGAAGTTGCAGTTTGACAAGTGTTGAAGTTGACGTTGTGCAATGTTC AACACAATCCCAGTTGAGGTTGAGACTCTCGAGTGGATGCTCAGCGGGCC GCGCTGAGCAATGCTGCATGCATGTCTATCTGGTTTTAACTAATCACTGA ACACCCAAAATCATGGAATGAAGACTTCTTCTTGTTCAGCCACGGAGCTT GCTTGGATCGCTGTCATGACTTGACAGCACACTTCTTGGGCCCAAGGCCA CATTTGGTGACCGGAGTTTGCGGATCTGGACGCTACGTCCTGGGGCACGC CCCGCCCGCAGACAAAGGTTCCTCGGGTTTTCCCTGCTGACAGGGGCCCG GACTTCACATATGGCAGGGACAGAACGGAATCCAGGACCGTTCGGACCTT CTTCCTGTCAGCCTCGGCGCACCGAGGTCTGCTTTCTGGCCCACGCACTT CTTTTGAGGTGTTTGCGGTCGTATCGTCAGCCGGACGGTACTGGGGAGCA CCCCAGCCCGCCAGACCGCCAGTTTAAGGGCTGCTGACAGCCTACGTGGT AGTTTGGTTCATTGGGTAACGGCAAACTTTCTACAGGCATCGTGGGCTTG CCGCAGGCCTATGTATCGCCATCGCACGCAGTTCAACGTTTCCGGTGGGC AGTTACACATCGAACGCGCAGAGTTTTGCAGGGCGGTGTGTGGCGGACGC ACAGGATTTGCAGGATTCGCGTGGTAACCTTCATCTACAGGCATTCGTGG GCTCGCATCACGCCTACGTCGCCATTCTCGCACGTACACAGTTCAACTTC AGGTGGCAGTTACACATCGAACGCGCAGAGTATTTGCAGGGCGGTGTGTG ACGCAGGACTGAGGGATTGGTGTGCCGTGCTTTGGAGCTGGTGGGAGCTT TGCGGGTCATCTGGGCGGGTTTGGCGCTCGGGTGAGCAGTGGGGCTGGCG CTTGTTGGAAAAACAGGAGGACGGGATCATTGGTCGGCGCTGAGGAGCGA TTGCGAGCAGCGCTGGCGTGGCGTTGAGGCAGCGGCGCAGTACATCGGTA CGTCATCTAGCGTGCTTCTCGATTGTCGCAGCTGACCTGCTCGCACGATC GCGGCGTACTTCTGTGGCCTCATGTTGCAGTTTTCGCTTCGTTGCTAGTT TTCGAGGCGTATTCTGCGTGTTTGCTGAGGTCGCACGGTTGCGTGCTCTG GCAAACTGCTAGTTTGACGGCATTGGGATATTGCCTATTTCGGAGCACGG TATCCTACGGCCTGGTGGGATTCGTAACGTGCGGAATCGATTTCTACAGC CAGTTTTCTTGCGGGGCAGCGCTGCCACCTGGCTGCCTCGAGCACTACAC CTGGTGGGCGACATTGCGCGTGCTCATTGGTGTCACTGGCTTAGTGGTCA CACGTACTGCAGCTCTACACCGCCTACGGCGCTGGGGGGGGGGTGTGCTG CAGACGTCTGGTGCAGAAACTCGGCATGCAAACTGGCTCGGCAACGGCGT ATCAGCTTGCTTGACGCTCGTCTATTGAGCTCAGTGATCATCGGATGATC GAGACAATCATGGTGAGCTCATTCGGCAACGATGTTGAGAGCGCATGACA TGCCAGCTTCGGTGAGACCGAGGGAAGATGACGTACAGTCATGGTGGAAC TTCGGCATGCTCAGTGACGTGTCGAAAAACTCGAGGCCACCGATGACAAC ATCACGTACAGATGCCGTCGAAGCTGCTTTGCCGTGCCTCAGTTCTACGC GCGGTGCAGTCGAGCTGGATGGGTCAGGTGCACGTGAGCAACCACGCTGG ACGGCAGCCACAGCAGCAGCACACCAGCCTGACGCTCTTGCGAAGAAGCT GAGGGACTTCAATCAGGTGTATGGTTCGTTCGTCTCGGAGCATCCGCACC CAACTGACGTGCCGGATTATCGGTTGGTGCCGCCGGCCTCAGTCACCAGC GGTTGTATGGTGTCAACGTGGGAACCCCGAGATGAGCTAGACTGCTGCGC GTCCTTCACCGACGATGACGAGGTCCTATGCACCGCATACGAACGGGTCG TGTGGACGGTGGCTGGGGTTCATCCTGACTCCGGTCGAGTCACGCTGGTC TGTGGCGGCGGCGCAGGTCCTAATGGTGAGGTCCGTCCCAACAAGGACTT CGAGGCGGCGGATTGGAAGGAGGCATGGATAACTGGCTAG
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Coding sequence (CDS) from alignment at Contig_53:557557..562596+

>mRNA_8198 ID=mRNA_8198|Name=jgi.p|Trimin1|349999|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1356bp|location=Sequence derived from alignment at Contig_53:557557..562596+ (Tribonema minus UTEX_B_3156 )
ATGGCGGACCTGGTCGAGAGGCTCATCAACAGGTTCGGGCAGGCGGCGGT
GAATACTGCCCAGGAGCACGAGCCCTCACACACGCGCCGGCTGCACGAGA
CTCTGTTGCGGACCTTCGAGCGAAGGCGACGCATCCTTGGAGCGGATCAA
GGCGTAAAGCTCAGGCACAAGACCGTCTCTTGCAGCCTTGCAAAGGTCCT
GCATCGGCACCCTAGCCTTGACATCGCCCAGACGCTCCAGGAGGCTGCAG
ATTACGTGGGGAAGGAGCGGGGGCAGGTTACACGAACGGAGCAGGACCTG
GAGCTGCTCAGCACGTACATACAGGTGCACTTCCAGCGGCGGCGCCTGGC
CATCACGTACTGGGCCCTGTTCCAAGCCCTGCGGGCGCACATCATGAACG
ACGATGATGACCCTGATACTCAAGTCGACATGACTGTGCGCCCGTTCACC
AGGGCTGTACATGGCCTGGCTGAGCTGGTGACCACCTATGCCGGCAATGA
CTTGCACGGGGAGCTGCAGGCACGCCTCAACCAGCTGGGCTTCAGGGGCG
CAGAGCTGATCCTGGACATCTGCGAGACGGTGCGCCACCTGCCCAACGGC
GACAGCGACGCTAGCAAGCGCCGGCTTTTGGCACAGCTGCAGCAGCTCTA
TGTGGAGACCAACCGCACAGACTACCAGGAGCTGATGTCGGGGTTTTTCG
AGCAGTTTCCAAATGATGCCGCAGCGCGCCGCGAGAACAGGGACGCTGTG
TGGGGCCTGCTGCCGTTTGCGGATCTGGACGCTACGTCCTGGGGCACGCC
CCGCCCGCAGACAAAGGTTCCTCGGGTTTTCCCTGCTGACAGGGGCCCGG
ACTTCACATATGGCAGGGACAGAACGGAATCCAGGACCGTTCGGACCTTC
TTCCTGTCAGCCTCGGCGCACCGAGTCGAGCTGGATGGGTCAGGTGCACG
TGAGCAACCACGCTGGACGGCAGCCACAGCAGCAGCACACCAGCCTGACG
CTCTTGCGAAGAAGCTGAGGGACTTCAATCAGGTGTATGGTTCGTTCGTC
TCGGAGCATCCGCACCCAACTGACGTGCCGGATTATCGGTTGGTGCCGCC
GGCCTCAGTCACCAGCGGTTGTATGGTGTCAACGTGGGAACCCCGAGATG
AGCTAGACTGCTGCGCGTCCTTCACCGACGATGACGAGGTCCTATGCACC
GCATACGAACGGGTCGTGTGGACGGTGGCTGGGGTTCATCCTGACTCCGG
TCGAGTCACGCTGGTCTGTGGCGGCGGCGCAGGTCCTAATGGTGAGGTCC
GTCCCAACAAGGACTTCGAGGCGGCGGATTGGAAGGAGGCATGGATAACT
GGCTAG
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