mRNA_8198 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A836CBU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU1_9STRA) HSP 1 Score: 918 bits (2373), Expect = 0.000e+0 Identity = 451/451 (100.00%), Postives = 451/451 (100.00%), Query Frame = 1
Query: 1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKERGQVTRTEQDLELLSTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAELILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLPFADLDATSWGTPRPQTKVPRVFPADRGPDFTYGRDRTESRTVRTFFLSASAHRVELDGSGAREQPRWTAATAAAHQPDALAKKLRDFNQVYGSFVSEHPHPTDVPDYRLVPPASVTSGCMVSTWEPRDELDCCASFTDDDEVLCTAYERVVWTVAGVHPDSGRVTLVCGGGAGPNGEVRPNKDFEAADWKEAWITG 1353
MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKERGQVTRTEQDLELLSTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAELILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLPFADLDATSWGTPRPQTKVPRVFPADRGPDFTYGRDRTESRTVRTFFLSASAHRVELDGSGAREQPRWTAATAAAHQPDALAKKLRDFNQVYGSFVSEHPHPTDVPDYRLVPPASVTSGCMVSTWEPRDELDCCASFTDDDEVLCTAYERVVWTVAGVHPDSGRVTLVCGGGAGPNGEVRPNKDFEAADWKEAWITG
Sbjct: 1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKERGQVTRTEQDLELLSTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAELILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLPFADLDATSWGTPRPQTKVPRVFPADRGPDFTYGRDRTESRTVRTFFLSASAHRVELDGSGAREQPRWTAATAAAHQPDALAKKLRDFNQVYGSFVSEHPHPTDVPDYRLVPPASVTSGCMVSTWEPRDELDCCASFTDDDEVLCTAYERVVWTVAGVHPDSGRVTLVCGGGAGPNGEVRPNKDFEAADWKEAWITG 451
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A835ZEL6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEL6_9STRA) HSP 1 Score: 426 bits (1096), Expect = 4.350e-138 Identity = 230/280 (82.14%), Postives = 239/280 (85.36%), Query Frame = 1
Query: 1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKER---GQVTRTEQ-------DLELL-STYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
MADLVERLINRFGQAAVN AQ HEPSHT RLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL+IAQTLQ+AADYVGK G R + D+ + STYIQVHFQRRRLAIT+WALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVH LAELVTTYAGNDLHGELQARL+QLGFRGAEL ILDICETVRHLP+GDSDASKRRLLAQ QQLYVET+RTDYQELMSG FEQFPNDAAARREN DAVWGLLP
Sbjct: 1 MADLVERLINRFGQAAVNIAQGHEPSHTHRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKALQAPGAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAITHWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGELQARLDQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQPQQLYVETDRTDYQELMSGLFEQFPNDAAARRENTDAVWGLLP 280
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A835YXL0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXL0_9STRA) HSP 1 Score: 419 bits (1076), Expect = 1.380e-135 Identity = 226/299 (75.59%), Postives = 238/299 (79.60%), Query Frame = 1
Query: 1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK------ERGQVTRTEQDLELLS------------------------TYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILG DQGV+LRH TVSCSLAKVLHRHPSLDI QTLQ+AADYVGK +R Q R +L+ L TYI+VHFQRRRLAITYWALFQALRAHI NDDDDPDTQVDMTVRPFTRAVH LAELVTTYAGNDLHG LQARLNQLGFRGAEL ILDICETVRHLP+GDSD+SKRRLLAQLQQLYVET+RTDYQ+LMSG FEQFP+DA ARRE+RDAVWGLLP
Sbjct: 1 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGTDQGVQLRHNTVSCSLAKVLHRHPSLDITQTLQDAADYVGKLPASTHQRFQDLRHNSNLQALQAPWAPWRLHEVFLYVAKDMATVAKTYIEVHFQRRRLAITYWALFQALRAHITNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGGLQARLNQLGFRGAELDDDGDVQEGADHLKILDICETVRHLPDGDSDSSKRRLLAQLQQLYVETDRTDYQDLMSGLFEQFPDDATARREHRDAVWGLLP 299
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A836CQS9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQS9_9STRA) HSP 1 Score: 403 bits (1036), Expect = 3.370e-129 Identity = 230/355 (64.79%), Postives = 242/355 (68.17%), Query Frame = 1
Query: 1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELL------------------------STYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
MADLVERLINRFGQAAVNTAQ HEPSHTR+LHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL+IA+TLQ+A DYVGK +R Q R +L+ L STYIQVHFQRRRLAIT+WALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVH LAELVT YAGNDLHGELQARLNQLGFRGAEL ILDICETVRHLP+GDSDASKRRLLAQLQQLYVET+RTDYQ+LMS FEQFP+DAAARRENRDAVWGLLP
Sbjct: 232 MADLVERLINRFGQAAVNTAQGHEPSHTRQLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIARTLQDATDYVGKVRHLASLLANYICTWKLDLGQPFPDATQRFFMECLTCYVQGAGAGYTNGAGPGAAQLPPSTLQRFQDLRNNSNLQALQAPGAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAITHWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTIYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDRTDYQDLMSELFEQFPDDAAARRENRDAVWGLLP 586
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A835Z9D2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D2_9STRA) HSP 1 Score: 404 bits (1037), Expect = 2.740e-127 Identity = 230/352 (65.34%), Postives = 240/352 (68.18%), Query Frame = 1
Query: 1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELLS------------------------TYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWG 756
MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL+IAQTLQ+AADYVGK +R Q R +L+ L TY +VHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVH LAELVTTYAGNDLHGELQARLNQLGFRGAEL ILDICETVRHLP+GDSDASKRRLLAQLQQLYVET+RTDYQ+LMSG FEQFP+DAAARRENRDAVWG
Sbjct: 1 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTRKLDLGQPFPDATQRFYMECLTCYVQGAGAGYTQGAGPGAAQLPPSTLQRFQDLRHNSNLQALQATWPPWRLHEVFLYVAKDMATVAKTYTEVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDNDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDRTDYQDLMSGLFEQFPDDAAARRENRDAVWG 352
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A836CNV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV6_9STRA) HSP 1 Score: 412 bits (1058), Expect = 5.180e-127 Identity = 239/378 (63.23%), Postives = 250/378 (66.14%), Query Frame = 1
Query: 1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELL------------------------STYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLPFADLDATSWGTPRPQTKVPRVFP 834
MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL+IAQTLQ+AADYVGK +R Q R +L+ L STYIQVHFQRRRLAIT+WALF ALRAHIMNDDDDPDTQVDMTVRPFTRAVH LAELVTTYAGNDLHGELQARLNQLGFRGAEL ILDICETVRHLP+GDSDASKRRLLAQLQQLYVET+RTDYQ+LMSG FEQFP+DAAARRENRDAVWGLLP P+ VPR P
Sbjct: 744 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTWKLDLGQPFPDATQRFFMECLTCYVQGAGAGYTNGAGPGAAQLPPSTLQRFQDLRNNSNLQALQAPGAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAITHWALFHALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDRTDYQDLMSGLFEQFPDDAAARRENRDAVWGLLPVP---------PKLTAPVPRFKP 1112
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A835YWJ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ2_9STRA) HSP 1 Score: 402 bits (1033), Expect = 3.380e-125 Identity = 234/355 (65.92%), Postives = 241/355 (67.89%), Query Frame = 1
Query: 1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGKER-----------------GQ------------------------VTRTE---------------QDL------------------------------ELLSTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL+IAQTLQ+AADYVGK R GQ T E QDL TYI+VHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRP TRAVH LAELVTTYAGNDLHGELQARLNQLGFRGAEL ILDICETVRHLP+GDSDASKRR LAQLQQLYVET+R DYQ+LMSG FEQFP+DAAARRENRDAVWGLLP
Sbjct: 1 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTWKLDLGQPFPDATQRFFMECLTCYVQGAGAGYTNGEGPGAAQLPPSTLQRFQDLCHNSNLQALQATWPPWRLHEVFLYVAKDMATAAKTYIEVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPLTRAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKRRHLAQLQQLYVETDRADYQDLMSGLFEQFPDDAAARRENRDAVWGLLP 355
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A835YJ56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ56_9STRA) HSP 1 Score: 406 bits (1043), Expect = 1.010e-123 Identity = 234/356 (65.73%), Postives = 243/356 (68.26%), Query Frame = 1
Query: 1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELL------------------------STYIQVHFQRRRLAI-TYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSL++AQTLQ+AADYVGK +R Q R +L+ L STYIQVHFQRRRLAI TYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVH LAELVTTYAGNDLHGE QARLNQLGFRGAEL ILDICETVRHLP+GDSDASK RLLAQLQQLYVET+RTDYQELMSG FEQFP+DAAARRENRDAVWGLLP
Sbjct: 277 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLEMAQTLQDAADYVGKVRHLASLLANYICTWKLHHGQPFPDATQRYFMECLTCYVQGAGAAYTNGAGPGAAQLPASTLQRFQDLRNNSNLQALQATWAPWRLHEVFLYVAKDMATVASTYIQVHFQRRRLAIITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHDLAELVTTYAGNDLHGEPQARLNQLGFRGAELDDDGDVQEGADYLKILDICETVRHLPDGDSDASKHRLLAQLQQLYVETDRTDYQELMSGLFEQFPDDAAARRENRDAVWGLLP 632
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A835Z8U0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U0_9STRA) HSP 1 Score: 380 bits (975), Expect = 4.290e-120 Identity = 227/390 (58.21%), Postives = 239/390 (61.28%), Query Frame = 1
Query: 1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELLS------------------------TYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTR-----------------------------------AVHGLAELVTTYAGNDLHGELQARLNQLGFRGAEL--------------ILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
MADLVERLINRFGQAAVNTAQEHEP HTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCS+AKVLHRHPSL+IAQTLQ+AADYVGK +R Q R +L+ L TYI+VHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFT AVH LAELVTTYAGNDLHGELQARLNQLGFRGAEL ILDICETVRHLP+GDSDASKRRLLAQLQQLYVET+ TDYQ+LMS F Q+P+D AARRENRDAVWGLLP
Sbjct: 1 MADLVERLINRFGQAAVNTAQEHEPLHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSIAKVLHRHPSLEIAQTLQDAADYVGKVRHLASLLANYICTWKLDLGQPFPDATQRFFMECLTCYVQGAGAGYTQGAGPGAAQLPPSTLQRFQDLRHNSNLQALQATWPPWRLHEVFLYVAKDIATVAKTYIEVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTSQAWMWPASTVRATVLVCHPTYELPLAKLIARVAPTAVHDLAELVTTYAGNDLHGELQARLNQLGFRGAELDDDGDVQEGANCLMILDICETVRHLPDGDSDASKRRLLAQLQQLYVETDCTDYQDLMSELFGQYPDDTAARRENRDAVWGLLP 390
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Match: A0A835Z9G0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G0_9STRA) HSP 1 Score: 332 bits (852), Expect = 3.390e-108 Identity = 199/341 (58.36%), Postives = 207/341 (60.70%), Query Frame = 1
Query: 1 MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLHRHPSLDIAQTLQEAADYVGK--------------------------------------------------------------ERGQVTRTEQDLELLS------------------------TYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRAVHGLAELVTTYAGNDLHGELQARLNQLGFRGAELILDICETVRHLPNGDSDASKRRLLAQLQQLYVETNRTDYQELMSGFFEQFPNDAAARRENRDAVWGLLP 765
MADLVERLINRFGQAAVNTAQ HEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVL RHPSLDIAQTLQEAA YVGK +R Q R +L+ L TYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTR G L ILDICETV H P+GDSDASKRRLLAQLQQLYVET+RTDY++LM G FEQFP+DAAARRENRDAVWGLLP
Sbjct: 1 MADLVERLINRFGQAAVNTAQGHEPSHTRRLHETLLRTFERRRRILGADQGVKLRHKTVSCSLAKVLQRHPSLDIAQTLQEAAVYVGKVRHLASLLANYICTWKLHHGQPFPDATQRFYMECSTCFVKGAGAGYTNGAGPGAAQVPPSTLQRFQYLRHNSNLQALQATWPPWRLHEVFLYVAKDMATVAKTYIQVHFQRRRLAITYWALFQALRAHIMNDDDDPDTQVDMTVRPFTRRAEGADYLK--------------------------ILDICETVHHSPDGDSDASKRRLLAQLQQLYVETDRTDYRDLMPGLFEQFPDDAAARRENRDAVWGLLP 315 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349999 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8198 ID=mRNA_8198|Name=jgi.p|Trimin1|349999|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1356bp|location=Sequence derived from alignment at Contig_53:557557..562596+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCGGACCTGGTCGAGAGGCTCATCAACAGGTTCGGGCAGGCGGCGGTback to top protein sequence of jgi.p|Trimin1|349999 >Trimin1|349999|estExt_Genemark1.C_Ctg_530071 ID=Trimin1|349999|estExt_Genemark1.C_Ctg_530071|Name=jgi.p|Trimin1|349999|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=452bp MADLVERLINRFGQAAVNTAQEHEPSHTRRLHETLLRTFERRRRILGADQback to top mRNA from alignment at Contig_53:557557..562596+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8198 ID=mRNA_8198|Name=jgi.p|Trimin1|349999|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5040bp|location=Sequence derived from alignment at Contig_53:557557..562596+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_53:557557..562596+ >mRNA_8198 ID=mRNA_8198|Name=jgi.p|Trimin1|349999|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1356bp|location=Sequence derived from alignment at Contig_53:557557..562596+ (Tribonema minus UTEX_B_3156 )back to top |