mRNA_8118 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A835YTK6_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK6_9STRA) HSP 1 Score: 458 bits (1179), Expect = 1.230e-162 Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1 Query: 1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRHAPYNDAADAGAGDGAAAVGQQGCVVA 732 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRHAPYNDAADAGAGDGAAAVGQQGCVVA Sbjct: 1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRHAPYNDAADAGAGDGAAAVGQQGCVVA 244
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A836CCD0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCD0_9STRA) HSP 1 Score: 310 bits (794), Expect = 2.590e-100 Identity = 174/250 (69.60%), Postives = 180/250 (72.00%), Query Frame = 1 Query: 1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGN-VDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRHAPYNDAADAGAGDG------AAAVGQQGCVV 729 IVRLR AFETES LVLELELMSGVDLFDRLSSGGVL DA+AA LVR+VLRAA FCAR G AHRDIKLSNLIYPRR A A VRL DFGM G D GLLHGRCGTPGYVAPEI AG+ GYA VDAFSIG VAYTVLCGYEPFYG +E L AN+ RYEFH PEW VPDDAKDLVAALLERDP KRLTP AAL+HPWL RHA A GAG A GQ GC V Sbjct: 269 IVRLRGAFETESQLVLELELMSGVDLFDRLSSGGVLGDADAAALVRSVLRAADFCARAGFAHRDIKLSNLIYPRRARDGG------AAASAGDVRLADFGMAGRVDAQGLLHGRCGTPGYVAPEIWRAGLREGYAARGVDAFSIGAVAYTVLCGYEPFYGGDEGALARANRDARYEFHAPEWSRVPDDAKDLVAALLERDPTKRLTPAAALAHPWLRRHAEAEAATRRGAGRRERETVCCGAGGQPGCAV 512
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A835YV58_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV58_9STRA) HSP 1 Score: 266 bits (680), Expect = 5.390e-87 Identity = 144/219 (65.75%), Postives = 158/219 (72.15%), Query Frame = 1 Query: 1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGN-VDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRH 654 IVRLR AFET++ LVLELELMSG DLFDRLS GGVL DA+AA L LRAA F R G HRDIKLSNLI+PRR A P RL DFGM G GLL GRCGTPGYVAPEIL A AGYA VDAFSIG VAYT LCGYEPFYG ++ L AAN+A YEFH PEW+GVP DA+DLVAALL+RDPA+R + +AAL+HPWL RH Sbjct: 16 IVRLRGAFETDAHLVLELELMSGGDLFDRLSGGGVLRDADAAALTAATLRAARFARRHGFCHRDIKLSNLIFPRRG------------APPGSARLADFGMAGRVGAHGLLRGRCGTPGYVAPEILEAPPGAGYAARGVDAFSIGAVAYTALCGYEPFYGDDDARLTAANRACAYEFHAPEWDGVPRDARDLVAALLQRDPARRASLDAALAHPWLRRH 222
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A6H5KPH2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPH2_9PHAE) HSP 1 Score: 218 bits (554), Expect = 3.040e-61 Identity = 113/219 (51.60%), Postives = 141/219 (64.38%), Query Frame = 1 Query: 1 IVRLRSAFETESLLVLELELMSGVDLFDRL-SSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRH 654 IVR+ S FET L+LE++LMS DLFDRL G S+ EAAGL RN+L A C RLG HRD+KLSNL+YP + P CV L DFGM + GL+ GRCGT GYVAPEIL AG GY NVD FS GVV Y LCG+EPF+GV E+ +IAANK +EF W+ + + AKDL+ ++E DPA+R+TP+ AL H W+++H Sbjct: 1094 IVRIHSIFETADDLILEMDLMSRTDLFDRLLERDGAFSEREAAGLTRNLLLAIDKCNRLGFCHRDVKLSNLLYP----------GPASTHGPECVLLADFGMATTAGRDGLVRGRCGTSGYVAPEILKAGKQEGYGMNVDIFSAGVVLYICLCGFEPFFGVTEKDVIAANKEAAFEFPPEAWDDISEGAKDLIRQMMEPDPARRITPQEALRHSWIVQH 1302
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A836CCZ2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCZ2_9STRA) HSP 1 Score: 211 bits (536), Expect = 2.410e-60 Identity = 112/215 (52.09%), Postives = 144/215 (66.98%), Query Frame = 1 Query: 1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWL 645 +V+LR+ FET V+E+ELMS +LF L+ GVLS+ EAA +++ +LRA + C G+AHRDIKLSN++ P A A P V+LGDFGM G G L GRCGTPGYVAPEIL AG + Y NVDA+S+GVVAYT+LCGYEPFYG + L+A NKAG ++F M +W V A+D V+AL++ +PA R+T AL HPWL Sbjct: 415 VVQLRNVFETRDTFVVEMELMSRSNLFHELARAGVLSEREAAPILQCLLRAVAHCQARGIAHRDIKLSNILCPA---PDGAGSRGCAAAAP-VVKLGDFGMAGAVGADGCLRGRCGTPGYVAPEILRAGPHEPYGANVDAYSVGVVAYTLLCGYEPFYGETDAELLAQNKAGDFDFDMADWCDVSLSAQDFVSALMDANPATRITAAEALEHPWL 625
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A7S1BGP7_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BGP7_9STRA) HSP 1 Score: 196 bits (499), Expect = 6.170e-57 Identity = 106/218 (48.62%), Postives = 134/218 (61.47%), Query Frame = 1 Query: 4 VRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRHA 657 VRL FETE+ LVLE++ DLF + VL++ AA + +VLRA + + G+AHRD+KL+NLI R V L DFGM D GLL GRCGTPGYVAPEIL AGVN+GY NVD FS GVV Y +LCGYEPFYG ++ LIA+N+ EFH EW V +AKDL+ ++E+D KR+ P+ AL H W+ +HA Sbjct: 215 VRLHGVFETEAHLVLEVDHARSRDLFQYVREREVLAEPHAAQIAGDVLRALAMLRKHGVAHRDLKLANLILEERERRV-------------AVWLSDFGMSAFVDGDGLLRGRCGTPGYVAPEILAAGVNSGYDPNVDIFSAGVVLYIMLCGYEPFYGETDKQLIASNRRAEVEFHEGEWTDVSAEAKDLIRKMMEKDTTKRIQPQEALKHSWIRKHA 419
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A835YKA9_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKA9_9STRA) HSP 1 Score: 188 bits (478), Expect = 9.290e-57 Identity = 99/198 (50.00%), Postives = 126/198 (63.64%), Query Frame = 1 Query: 52 LELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWL 645 +ELMS LF L+ G +++A+A +VR +L A C + G+AHRDIK+S I+ A+ V+L DFGM G G L GRCGTPGYVAPEILHAG + Y NVD +S+GVVAYT+LCGYEPFYG + L+A NKAG +EFH+ +W + A+D V+AL+E DP KRLT AL HPWL Sbjct: 1 MELMSRSTLFHELAHAGAMTEADAVPIVRCLLEAVDMCQQRGIAHRDIKVS--IHQCCSAIDGRLSPCLFPANVPPVKLADFGMAGAAGADGCLRGRCGTPGYVAPEILHAGPHEPYGPNVDTYSVGVVAYTLLCGYEPFYGQTDAELLAQNKAGEFEFHLSDWCEISLAAQDFVSALMEADPGKRLTAAQALRHPWL 196
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: T0R5M1_SAPDV (Serine/threonine protein kinase n=3 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R5M1_SAPDV) HSP 1 Score: 201 bits (511), Expect = 8.870e-56 Identity = 107/219 (48.86%), Postives = 145/219 (66.21%), Query Frame = 1 Query: 1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCV-RLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRH 654 +VRL S FET LV+E+ELM+G D++D + + G LS+ +AA ++ +++++ FC G+AHRD+K+SNL + D CV +L DFGM + G+L GRCGTPGYVAPEIL AGV Y +VD FS GVV YT+LCGYEPFY +N++ LI NKA Y FH EW + DDAKDL+A +L ++PA+R+ P AL+HP+L RH Sbjct: 698 VVRLLSLFETHDHLVMEMELMAGGDIYDHIVTHGPLSEPQAALVMTHLVQSIQFCLENGIAHRDVKISNLALDVQTTI--------GSTDRPCVLKLADFGMGAFLESNGMLLGRCGTPGYVAPEILTAGVQEPYPPHVDMFSAGVVLYTLLCGYEPFYAINDKELILLNKAVTYFFHPEEWSHISDDAKDLIARMLAKNPAERIRPHEALAHPFL-RH 907
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A5D6XXR0_9STRA (Protein kinase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXR0_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.590e-55 Identity = 101/215 (46.98%), Postives = 137/215 (63.72%), Query Frame = 1 Query: 1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWL 645 ++RL S FET SLLVLELELM DL + + + + + A+ LV ++++A ++C + G+AHRD+KLSNL +++ DFGM + G L GRCGTPG+VAPEIL AG Y VD FS+GVV YT+LCGYEPF+GVN+ LI NK+ YEF PEW + D+AKDL+ ++E+D AKR+TP+ AL HP+L Sbjct: 753 VIRLLSLFETRSLLVLELELMQEGDLHEEIVTNSAIDEVRASFLVASLVKAIAYCLQHGIAHRDVKLSNLALDFATSSKGRRYSV--------IKMADFGMAAFIESDGRLKGRCGTPGFVAPEILTAGKGESYPSGVDMFSVGVVTYTMLCGYEPFFGVNDEELIQMNKSVEYEFEEPEWTSISDEAKDLITLMMEKDTAKRITPQEALKHPFL 959
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: H3GLV8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLV8_PHYRM) HSP 1 Score: 199 bits (505), Expect = 5.500e-55 Identity = 101/217 (46.54%), Postives = 140/217 (64.52%), Query Frame = 1 Query: 1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLI--YPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWL 645 ++RL+S FET + LV+ELELM DL + +++ + + A+ L+ +++RA +C R G+AHRD+KLSNL Y R + +++ DFGM K G+L GRCGTPG+VAPEIL AG Y VD FS GVVAYT+LCGYEPF+GVN+ LI NK YEF PEW + D+AKD+++ ++E+D KR+TP+ AL HP+L Sbjct: 679 VIRLQSLFETRNHLVMELELMRDGDLHEEIATKSAVDEPRASFLIASLIRAIDYCQRNGVAHRDVKLSNLALDYERSANGK----------EYAVIKVADFGMAAFIQKDGMLKGRCGTPGFVAPEILCAGKGEAYPSGVDMFSAGVVAYTMLCGYEPFFGVNDEELIQMNKLVNYEFEEPEWTNISDEAKDMISLMMEKDALKRVTPKQALEHPFL 885 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_8118 ID=mRNA_8118|Name=jgi.p|Trimin1|165841|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=735bp|location=Sequence derived from alignment at Contig_40:912653..913387- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATCGTGCGGCTGCGCAGCGCGTTCGAGACGGAGTCGCTGCTCGTGCTCGAback to top protein sequence of jgi.p|Trimin1|165841 >Trimin1|165841|e_gw1.40.117.1 ID=Trimin1|165841|e_gw1.40.117.1|Name=jgi.p|Trimin1|165841|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=245bp IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRback to top mRNA from alignment at Contig_40:912653..913387- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_8118 ID=mRNA_8118|Name=jgi.p|Trimin1|165841|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=735bp|location=Sequence derived from alignment at Contig_40:912653..913387- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_40:912653..913387- >mRNA_8118 ID=mRNA_8118|Name=jgi.p|Trimin1|165841|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=735bp|location=Sequence derived from alignment at Contig_40:912653..913387- (Tribonema minus UTEX_B_3156 )back to top |