mRNA_8118 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|165841
Unique NamemRNA_8118
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A835YTK6_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK6_9STRA)

HSP 1 Score: 458 bits (1179), Expect = 1.230e-162
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1
Query:    1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRHAPYNDAADAGAGDGAAAVGQQGCVVA 732
            IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRHAPYNDAADAGAGDGAAAVGQQGCVVA
Sbjct:    1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRHAPYNDAADAGAGDGAAAVGQQGCVVA 244          
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A836CCD0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCD0_9STRA)

HSP 1 Score: 310 bits (794), Expect = 2.590e-100
Identity = 174/250 (69.60%), Postives = 180/250 (72.00%), Query Frame = 1
Query:    1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGN-VDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRHAPYNDAADAGAGDG------AAAVGQQGCVV 729
            IVRLR AFETES LVLELELMSGVDLFDRLSSGGVL DA+AA LVR+VLRAA FCAR G AHRDIKLSNLIYPRR           A A    VRL DFGM G  D  GLLHGRCGTPGYVAPEI  AG+  GYA   VDAFSIG VAYTVLCGYEPFYG +E  L  AN+  RYEFH PEW  VPDDAKDLVAALLERDP KRLTP AAL+HPWL RHA    A   GAG          A GQ GC V
Sbjct:  269 IVRLRGAFETESQLVLELELMSGVDLFDRLSSGGVLGDADAAALVRSVLRAADFCARAGFAHRDIKLSNLIYPRRARDGG------AAASAGDVRLADFGMAGRVDAQGLLHGRCGTPGYVAPEIWRAGLREGYAARGVDAFSIGAVAYTVLCGYEPFYGGDEGALARANRDARYEFHAPEWSRVPDDAKDLVAALLERDPTKRLTPAAALAHPWLRRHAEAEAATRRGAGRRERETVCCGAGGQPGCAV 512          
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A835YV58_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV58_9STRA)

HSP 1 Score: 266 bits (680), Expect = 5.390e-87
Identity = 144/219 (65.75%), Postives = 158/219 (72.15%), Query Frame = 1
Query:    1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGN-VDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRH 654
            IVRLR AFET++ LVLELELMSG DLFDRLS GGVL DA+AA L    LRAA F  R G  HRDIKLSNLI+PRR             A P   RL DFGM G     GLL GRCGTPGYVAPEIL A   AGYA   VDAFSIG VAYT LCGYEPFYG ++  L AAN+A  YEFH PEW+GVP DA+DLVAALL+RDPA+R + +AAL+HPWL RH
Sbjct:   16 IVRLRGAFETDAHLVLELELMSGGDLFDRLSGGGVLRDADAAALTAATLRAARFARRHGFCHRDIKLSNLIFPRRG------------APPGSARLADFGMAGRVGAHGLLRGRCGTPGYVAPEILEAPPGAGYAARGVDAFSIGAVAYTALCGYEPFYGDDDARLTAANRACAYEFHAPEWDGVPRDARDLVAALLQRDPARRASLDAALAHPWLRRH 222          
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A6H5KPH2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPH2_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 3.040e-61
Identity = 113/219 (51.60%), Postives = 141/219 (64.38%), Query Frame = 1
Query:    1 IVRLRSAFETESLLVLELELMSGVDLFDRL-SSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRH 654
            IVR+ S FET   L+LE++LMS  DLFDRL    G  S+ EAAGL RN+L A   C RLG  HRD+KLSNL+YP             +   P CV L DFGM     + GL+ GRCGT GYVAPEIL AG   GY  NVD FS GVV Y  LCG+EPF+GV E+ +IAANK   +EF    W+ + + AKDL+  ++E DPA+R+TP+ AL H W+++H
Sbjct: 1094 IVRIHSIFETADDLILEMDLMSRTDLFDRLLERDGAFSEREAAGLTRNLLLAIDKCNRLGFCHRDVKLSNLLYP----------GPASTHGPECVLLADFGMATTAGRDGLVRGRCGTSGYVAPEILKAGKQEGYGMNVDIFSAGVVLYICLCGFEPFFGVTEKDVIAANKEAAFEFPPEAWDDISEGAKDLIRQMMEPDPARRITPQEALRHSWIVQH 1302          
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A836CCZ2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCZ2_9STRA)

HSP 1 Score: 211 bits (536), Expect = 2.410e-60
Identity = 112/215 (52.09%), Postives = 144/215 (66.98%), Query Frame = 1
Query:    1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWL 645
            +V+LR+ FET    V+E+ELMS  +LF  L+  GVLS+ EAA +++ +LRA + C   G+AHRDIKLSN++ P             A A P  V+LGDFGM G     G L GRCGTPGYVAPEIL AG +  Y  NVDA+S+GVVAYT+LCGYEPFYG  +  L+A NKAG ++F M +W  V   A+D V+AL++ +PA R+T   AL HPWL
Sbjct:  415 VVQLRNVFETRDTFVVEMELMSRSNLFHELARAGVLSEREAAPILQCLLRAVAHCQARGIAHRDIKLSNILCPA---PDGAGSRGCAAAAP-VVKLGDFGMAGAVGADGCLRGRCGTPGYVAPEILRAGPHEPYGANVDAYSVGVVAYTLLCGYEPFYGETDAELLAQNKAGDFDFDMADWCDVSLSAQDFVSALMDANPATRITAAEALEHPWL 625          
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A7S1BGP7_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BGP7_9STRA)

HSP 1 Score: 196 bits (499), Expect = 6.170e-57
Identity = 106/218 (48.62%), Postives = 134/218 (61.47%), Query Frame = 1
Query:    4 VRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRHA 657
            VRL   FETE+ LVLE++     DLF  +    VL++  AA +  +VLRA +   + G+AHRD+KL+NLI   R                  V L DFGM    D  GLL GRCGTPGYVAPEIL AGVN+GY  NVD FS GVV Y +LCGYEPFYG  ++ LIA+N+    EFH  EW  V  +AKDL+  ++E+D  KR+ P+ AL H W+ +HA
Sbjct:  215 VRLHGVFETEAHLVLEVDHARSRDLFQYVREREVLAEPHAAQIAGDVLRALAMLRKHGVAHRDLKLANLILEERERRV-------------AVWLSDFGMSAFVDGDGLLRGRCGTPGYVAPEILAAGVNSGYDPNVDIFSAGVVLYIMLCGYEPFYGETDKQLIASNRRAEVEFHEGEWTDVSAEAKDLIRKMMEKDTTKRIQPQEALKHSWIRKHA 419          
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A835YKA9_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKA9_9STRA)

HSP 1 Score: 188 bits (478), Expect = 9.290e-57
Identity = 99/198 (50.00%), Postives = 126/198 (63.64%), Query Frame = 1
Query:   52 LELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWL 645
            +ELMS   LF  L+  G +++A+A  +VR +L A   C + G+AHRDIK+S  I+                A+   V+L DFGM G     G L GRCGTPGYVAPEILHAG +  Y  NVD +S+GVVAYT+LCGYEPFYG  +  L+A NKAG +EFH+ +W  +   A+D V+AL+E DP KRLT   AL HPWL
Sbjct:    1 MELMSRSTLFHELAHAGAMTEADAVPIVRCLLEAVDMCQQRGIAHRDIKVS--IHQCCSAIDGRLSPCLFPANVPPVKLADFGMAGAAGADGCLRGRCGTPGYVAPEILHAGPHEPYGPNVDTYSVGVVAYTLLCGYEPFYGQTDAELLAQNKAGEFEFHLSDWCEISLAAQDFVSALMEADPGKRLTAAQALRHPWL 196          
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: T0R5M1_SAPDV (Serine/threonine protein kinase n=3 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R5M1_SAPDV)

HSP 1 Score: 201 bits (511), Expect = 8.870e-56
Identity = 107/219 (48.86%), Postives = 145/219 (66.21%), Query Frame = 1
Query:    1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCV-RLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWLLRH 654
            +VRL S FET   LV+E+ELM+G D++D + + G LS+ +AA ++ +++++  FC   G+AHRD+K+SNL    +              D  CV +L DFGM    +  G+L GRCGTPGYVAPEIL AGV   Y  +VD FS GVV YT+LCGYEPFY +N++ LI  NKA  Y FH  EW  + DDAKDL+A +L ++PA+R+ P  AL+HP+L RH
Sbjct:  698 VVRLLSLFETHDHLVMEMELMAGGDIYDHIVTHGPLSEPQAALVMTHLVQSIQFCLENGIAHRDVKISNLALDVQTTI--------GSTDRPCVLKLADFGMGAFLESNGMLLGRCGTPGYVAPEILTAGVQEPYPPHVDMFSAGVVLYTLLCGYEPFYAINDKELILLNKAVTYFFHPEEWSHISDDAKDLIARMLAKNPAERIRPHEALAHPFL-RH 907          
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: A0A5D6XXR0_9STRA (Protein kinase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXR0_9STRA)

HSP 1 Score: 201 bits (510), Expect = 1.590e-55
Identity = 101/215 (46.98%), Postives = 137/215 (63.72%), Query Frame = 1
Query:    1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLIYPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWL 645
            ++RL S FET SLLVLELELM   DL + + +   + +  A+ LV ++++A ++C + G+AHRD+KLSNL                       +++ DFGM    +  G L GRCGTPG+VAPEIL AG    Y   VD FS+GVV YT+LCGYEPF+GVN+  LI  NK+  YEF  PEW  + D+AKDL+  ++E+D AKR+TP+ AL HP+L
Sbjct:  753 VIRLLSLFETRSLLVLELELMQEGDLHEEIVTNSAIDEVRASFLVASLVKAIAYCLQHGIAHRDVKLSNLALDFATSSKGRRYSV--------IKMADFGMAAFIESDGRLKGRCGTPGFVAPEILTAGKGESYPSGVDMFSVGVVTYTMLCGYEPFFGVNDEELIQMNKSVEYEFEEPEWTSISDEAKDLITLMMEKDTAKRITPQEALKHPFL 959          
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Match: H3GLV8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLV8_PHYRM)

HSP 1 Score: 199 bits (505), Expect = 5.500e-55
Identity = 101/217 (46.54%), Postives = 140/217 (64.52%), Query Frame = 1
Query:    1 IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLRAASFCARLGMAHRDIKLSNLI--YPRRXXXXXXXXXXXACADPRCVRLGDFGMVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTVLCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDPAKRLTPEAALSHPWL 645
            ++RL+S FET + LV+ELELM   DL + +++   + +  A+ L+ +++RA  +C R G+AHRD+KLSNL   Y R               +   +++ DFGM     K G+L GRCGTPG+VAPEIL AG    Y   VD FS GVVAYT+LCGYEPF+GVN+  LI  NK   YEF  PEW  + D+AKD+++ ++E+D  KR+TP+ AL HP+L
Sbjct:  679 VIRLQSLFETRNHLVMELELMRDGDLHEEIATKSAVDEPRASFLIASLIRAIDYCQRNGVAHRDVKLSNLALDYERSANGK----------EYAVIKVADFGMAAFIQKDGMLKGRCGTPGFVAPEILCAGKGEAYPSGVDMFSAGVVAYTMLCGYEPFFGVNDEELIQMNKLVNYEFEEPEWTNISDEAKDMISLMMEKDALKRVTPKQALEHPFL 885          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|165841 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YTK6_9STRA1.230e-162100.00Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A836CCD0_9STRA2.590e-10069.60Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YV58_9STRA5.390e-8765.75Kinase-like domain-containing protein (Fragment) n... [more]
A0A6H5KPH2_9PHAE3.040e-6151.60Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A836CCZ2_9STRA2.410e-6052.09Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S1BGP7_9STRA6.170e-5748.62Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A835YKA9_9STRA9.290e-5750.00Kinase-like domain-containing protein n=1 Tax=Trib... [more]
T0R5M1_SAPDV8.870e-5648.86Serine/threonine protein kinase n=3 Tax=Saprolegni... [more]
A0A5D6XXR0_9STRA1.590e-5546.98Protein kinase domain-containing protein n=1 Tax=P... [more]
H3GLV8_PHYRM5.500e-5546.54Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_40contigContig_40:912653..913387 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|165841|e_gw1.40.117.1
BRITEko00000,ko00001,ko01000,ko01001
KEGG Pathwayko04626,ko04921,ko04925,ko05145,map04626,map04921,map04925,map05145
KEGG koko:K08794,ko:K13412,ko:K17530
EC2.7.11.1,2.7.11.17
Descriptionprotein serine/threonine kinase activity
COG categoryT
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0032@1|root,KOG0032@2759|Eukaryota
Evalue1.45e-56
Seed ortholog112098.XP_008604807.1
Hectar predicted targeting categoryother localisation
TranscriptId166163
TrackFilteredModels1
ProteinId165841
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165841gene_8118Tribonema minus UTEX_B_3156 geneContig_40 912653..913387 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8118_1exon_8118_1Tribonema minus UTEX_B_3156 exonContig_40 912653..913387 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8118CDS_8118Tribonema minus UTEX_B_3156 CDSContig_40 912653..913387 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|165841Trimin1|165841|e_gw1.40.117.1Tribonema minus UTEX_B_3156 polypeptideContig_40 912653..913387 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8118 ID=mRNA_8118|Name=jgi.p|Trimin1|165841|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=735bp|location=Sequence derived from alignment at Contig_40:912653..913387- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATCGTGCGGCTGCGCAGCGCGTTCGAGACGGAGTCGCTGCTCGTGCTCGA
GCTCGAGCTCATGAGCGGCGTGGACCTCTTTGACAGGCTCAGCAGCGGCG
GCGTGCTGAGCGACGCGGAGGCGGCGGGCCTCGTGCGCAACGTGCTGCGC
GCAGCGAGCTTCTGCGCGCGCCTCGGCATGGCGCACCGCGACATCAAATT
ATCAAACTTGATCTACCCGCGGCGGCGCGGCGGCGGCGGCAGCGGCGGCG
GCGGCGGCGCCTGCGCCGACCCGCGCTGCGTGCGCCTCGGCGACTTCGGC
ATGGTCGGCCTGCACGACAAGGCCGGCCTGCTGCACGGGCGCTGCGGGAC
GCCGGGGTACGTTGCGCCGGAGATCCTGCACGCGGGCGTCAACGCGGGGT
ACGCAGGGAACGTGGACGCGTTCTCCATCGGCGTCGTCGCGTACACGGTG
CTGTGCGGCTACGAGCCGTTCTACGGCGTGAACGAGCGCCTGCTCATCGC
CGCCAACAAGGCGGGGCGCTACGAGTTCCACATGCCCGAGTGGGAGGGCG
TCCCTGACGACGCGAAGGACCTCGTGGCAGCGCTCCTCGAGCGCGACCCC
GCCAAGCGCCTCACGCCGGAGGCCGCGCTCAGCCACCCGTGGCTGCTGCG
GCACGCGCCGTACAACGACGCCGCCGATGCGGGGGCTGGCGACGGCGCGG
CGGCGGTTGGCCAGCAGGGGTGCGTGGTGGCGTGA
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protein sequence of jgi.p|Trimin1|165841

>Trimin1|165841|e_gw1.40.117.1 ID=Trimin1|165841|e_gw1.40.117.1|Name=jgi.p|Trimin1|165841|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=245bp
IVRLRSAFETESLLVLELELMSGVDLFDRLSSGGVLSDAEAAGLVRNVLR
AASFCARLGMAHRDIKLSNLIYPRRRGGGGSGGGGGACADPRCVRLGDFG
MVGLHDKAGLLHGRCGTPGYVAPEILHAGVNAGYAGNVDAFSIGVVAYTV
LCGYEPFYGVNERLLIAANKAGRYEFHMPEWEGVPDDAKDLVAALLERDP
AKRLTPEAALSHPWLLRHAPYNDAADAGAGDGAAAVGQQGCVVA*
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mRNA from alignment at Contig_40:912653..913387-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8118 ID=mRNA_8118|Name=jgi.p|Trimin1|165841|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=735bp|location=Sequence derived from alignment at Contig_40:912653..913387- (Tribonema minus UTEX_B_3156 )
ATCGTGCGGCTGCGCAGCGCGTTCGAGACGGAGTCGCTGCTCGTGCTCGA GCTCGAGCTCATGAGCGGCGTGGACCTCTTTGACAGGCTCAGCAGCGGCG GCGTGCTGAGCGACGCGGAGGCGGCGGGCCTCGTGCGCAACGTGCTGCGC GCAGCGAGCTTCTGCGCGCGCCTCGGCATGGCGCACCGCGACATCAAATT ATCAAACTTGATCTACCCGCGGCGGCGCGGCGGCGGCGGCAGCGGCGGCG GCGGCGGCGCCTGCGCCGACCCGCGCTGCGTGCGCCTCGGCGACTTCGGC ATGGTCGGCCTGCACGACAAGGCCGGCCTGCTGCACGGGCGCTGCGGGAC GCCGGGGTACGTTGCGCCGGAGATCCTGCACGCGGGCGTCAACGCGGGGT ACGCAGGGAACGTGGACGCGTTCTCCATCGGCGTCGTCGCGTACACGGTG CTGTGCGGCTACGAGCCGTTCTACGGCGTGAACGAGCGCCTGCTCATCGC CGCCAACAAGGCGGGGCGCTACGAGTTCCACATGCCCGAGTGGGAGGGCG TCCCTGACGACGCGAAGGACCTCGTGGCAGCGCTCCTCGAGCGCGACCCC GCCAAGCGCCTCACGCCGGAGGCCGCGCTCAGCCACCCGTGGCTGCTGCG GCACGCGCCGTACAACGACGCCGCCGATGCGGGGGCTGGCGACGGCGCGG CGGCGGTTGGCCAGCAGGGGTGCGTGGTGGCGTGA
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Coding sequence (CDS) from alignment at Contig_40:912653..913387-

>mRNA_8118 ID=mRNA_8118|Name=jgi.p|Trimin1|165841|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=735bp|location=Sequence derived from alignment at Contig_40:912653..913387- (Tribonema minus UTEX_B_3156 )
ATCGTGCGGCTGCGCAGCGCGTTCGAGACGGAGTCGCTGCTCGTGCTCGA
GCTCGAGCTCATGAGCGGCGTGGACCTCTTTGACAGGCTCAGCAGCGGCG
GCGTGCTGAGCGACGCGGAGGCGGCGGGCCTCGTGCGCAACGTGCTGCGC
GCAGCGAGCTTCTGCGCGCGCCTCGGCATGGCGCACCGCGACATCAAATT
ATCAAACTTGATCTACCCGCGGCGGCGCGGCGGCGGCGGCAGCGGCGGCG
GCGGCGGCGCCTGCGCCGACCCGCGCTGCGTGCGCCTCGGCGACTTCGGC
ATGGTCGGCCTGCACGACAAGGCCGGCCTGCTGCACGGGCGCTGCGGGAC
GCCGGGGTACGTTGCGCCGGAGATCCTGCACGCGGGCGTCAACGCGGGGT
ACGCAGGGAACGTGGACGCGTTCTCCATCGGCGTCGTCGCGTACACGGTG
CTGTGCGGCTACGAGCCGTTCTACGGCGTGAACGAGCGCCTGCTCATCGC
CGCCAACAAGGCGGGGCGCTACGAGTTCCACATGCCCGAGTGGGAGGGCG
TCCCTGACGACGCGAAGGACCTCGTGGCAGCGCTCCTCGAGCGCGACCCC
GCCAAGCGCCTCACGCCGGAGGCCGCGCTCAGCCACCCGTGGCTGCTGCG
GCACGCGCCGTACAACGACGCCGCCGATGCGGGGGCTGGCGACGGCGCGG
CGGCGGTTGGCCAGCAGGGGTGCGTGGTGGCGTGA
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