mRNA_7904 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349164
Unique Name	mRNA_7904
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|349164 vs. uniprot
Match: A0A835YU94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU94_9STRA)

HSP 1 Score: 927 bits (2397), Expect = 0.000e+0
Identity = 633/633 (100.00%), Postives = 633/633 (100.00%), Query Frame = 1

Query:    1 MSVEAVAEAARLLRFNASSAGVDRLPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRVLATATTYNAVMAAANAGLGEGVFASHHAKRRVDRLPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRVLATATAYNAVMAAANAGLGEGVFASHHAKRRVNIWYEELPDGSKVKHTEGGASVKXXXXXXXXXXXXXARLAYKFKGCSEDLELWATTHRLKGGGGPFICMQKKKLVQVALDFHLCSTSGVQHMTKPRLLGMSRASEKHFEEFGGGGSVSGXXXXXXXXXXXXXXXXGSPSHAEHCCELTEDGHHDAECHVGDGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGMLLVEMQQLNEAPEQRQRDAHTQRQRQLLDFMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPALLPPAPPMEAXXXXXXXXXXXNTDIARRAEALQXXXXXXXXXXXXXXXXXXEGLTDAHYEVVYVEAQLRSVRLKICERS 1899
            MSVEAVAEAARLLRFNASSAGVDRLPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRVLATATTYNAVMAAANAGLGEGVFASHHAKRRVDRLPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRVLATATAYNAVMAAANAGLGEGVFASHHAKRRVNIWYEELPDGSKVKHTEGGASVKXXXXXXXXXXXXXARLAYKFKGCSEDLELWATTHRLKGGGGPFICMQKKKLVQVALDFHLCSTSGVQHMTKPRLLGMSRASEKHFEEFGGGGSVSGXXXXXXXXXXXXXXXXGSPSHAEHCCELTEDGHHDAECHVGDGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGMLLVEMQQLNEAPEQRQRDAHTQRQRQLLDFMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPALLPPAPPMEAXXXXXXXXXXXNTDIARRAEALQXXXXXXXXXXXXXXXXXXEGLTDAHYEVVYVEAQLRSVRLKICERS
Sbjct:    1 MSVEAVAEAARLLRFNASSAGVDRLPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRVLATATTYNAVMAAANAGLGEGVFASHHAKRRVDRLPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRVLATATAYNAVMAAANAGLGEGVFASHHAKRRVNIWYEELPDGSKVKHTEGGASVKXXXXXXXXXXXXXARLAYKFKGCSEDLELWATTHRLKGGGGPFICMQKKKLVQVALDFHLCSTSGVQHMTKPRLLGMSRASEKHFEEFGGGGSVSGXXXXXXXXXXXXXXXXGSPSHAEHCCELTEDGHHDAECHVGDGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGMLLVEMQQLNEAPEQRQRDAHTQRQRQLLDFMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPALLPPAPPMEAXXXXXXXXXXXNTDIARRAEALQXXXXXXXXXXXXXXXXXXEGLTDAHYEVVYVEAQLRSVRLKICERS 633

[Close]

BLAST of jgi.p|Trimin1|349164 vs. uniprot
Match: A0A836CEA0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEA0_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.560e-31
Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 1

Query:  463 LPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGG 741
            LP LLLL RARLLALTRCAAAA+AAFCATAATGLE+TWCEGAIIA  HL+ LRS+IVPEVA++ E L +LQLD A  EHGGYTLSLPDGRGGG
Sbjct:  413 LPLLLLLERARLLALTRCAAAAAAAFCATAATGLEATWCEGAIIAAAHLEALRSTIVPEVAESTEELCDLQLDRAKNEHGGYTLSLPDGRGGG 505

[Close]

BLAST of jgi.p|Trimin1|349164 vs. uniprot
Match: A0A835Z259_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z259_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.140e-6
Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 1

Query: 1252 GSPSHAEHCCELTEDGHHDAECHVGDGGG 1338
            GSPSHAEHC ELTEDGHHDAECHVGDG G
Sbjct:  379 GSPSHAEHCFELTEDGHHDAECHVGDGSG 407

[Close]

BLAST of jgi.p|Trimin1|349164 vs. uniprot
Match: A0A835ZCQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCQ5_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.020e-5
Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 1

Query:  844 VNIWYEELPDGSKVKHTEGGASVK 915
            +NIWYEELPDGSKVKHTEGGASVK
Sbjct:    7 LNIWYEELPDGSKVKHTEGGASVK 30

[Close]

BLAST of jgi.p|Trimin1|349164 vs. uniprot
Match: A0A835Z2T7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2T7_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.070e-5
Identity = 39/94 (41.49%), Postives = 48/94 (51.06%), Query Frame = 1

Query:  559 GLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRVLATATAYNAVMAAANAGLGEGVFASHHAKR 840
            G  +TWCEGA + P+HL  +R  IV  +A   + L  L L  +  +HG Y L + D R       A   AY AV AAA AGLG   F SH   R
Sbjct:  222 GKAATWCEGADVQPQHLAAVRR-IVQNLAPAKQDLHGLALGESANKHGAYYLHVHDKR-------APVAAYEAVQAAATAGLGLNTFDSHFRSR 307

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349164 vs. uniprot

BLAST of jgi.p|Trimin1|349164 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A835YU94_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CEA0_9STRA	1.560e-31	80.65	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z259_9STRA	3.140e-6	93.10	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZCQ5_9STRA	1.020e-5	95.83	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z2T7_9STRA	1.070e-5	41.49	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_37	contig	Contig_37:985267..990861 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349164\|estExt_Genemark1.C_Ctg_370114
Hectar predicted targeting category	other localisation
TranscriptId	349486
Track	FilteredModels1
ProteinId	349164

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349164	gene_7904	Tribonema minus UTEX_B_3156	gene	Contig_37 985267..990861 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349164	Trimin1\|349164\|estExt_Genemark1.C_Ctg_370114	Tribonema minus UTEX_B_3156	polypeptide	Contig_37 985267..990792 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_7904_1	exon_7904_1	Tribonema minus UTEX_B_3156	exon	Contig_37 985267..985330 +
exon_7904_2	exon_7904_2	Tribonema minus UTEX_B_3156	exon	Contig_37 985936..986325 +
exon_7904_3	exon_7904_3	Tribonema minus UTEX_B_3156	exon	Contig_37 986884..987273 +
exon_7904_4	exon_7904_4	Tribonema minus UTEX_B_3156	exon	Contig_37 988392..988463 +
exon_7904_5	exon_7904_5	Tribonema minus UTEX_B_3156	exon	Contig_37 989164..989201 +
exon_7904_6	exon_7904_6	Tribonema minus UTEX_B_3156	exon	Contig_37 989845..990861 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_7904	CDS_7904	Tribonema minus UTEX_B_3156	CDS	Contig_37 985267..985330 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_7904	UTR3_7904	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_37 990793..990861 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_37:985267..990861+
coding sequence from alignment at Contig_37:985267..990861+

spliced messenger RNA

>mRNA_7904 ID=mRNA_7904|Name=jgi.p|Trimin1|349164|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1971bp|location=Sequence derived from alignment at Contig_37:985267..990861+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTCGGTGGAGGCCGTGGCTGAGGCGGCGAGGCTCTTGAGGTTCAATGC
GTCAAGCGCTGGAGTCGACAGGCTGCCGCCGCTGCTGCTGCTGGGGCGCG
CGCGGCTCCTGGCGCTGACACGGTGCGCTGCCGCTGCCTCTGCCGCTTTT
TGCGCCACTGCTGCGACAGGCCTCGAGTCGACGTGGTGTGAGGGCGCCAT
CATTGCCCCAGAACACCTGGACAAACTGCGCAGCAGCATCGTGCCGGAGG
TCGCCAAGACAGTGGAGGGGCTGCGCAACCTGCAGCTGGACCACGCGTTG
AAGGAGCACGGCGGGTACACTCTGTCCCTGCCTGACGGGCGGGGCGGGGG
GGGCAGAGTGCTCGCGACGGCAACGACGTACAATGCCGTCATGGCCGCCG
CGAACGCCGGGCTGGGGGAGGGTGTCTTCGCCAGCCACCACGCCAAACGC
CGGGTCGACAGGCTGCCGCCGCTGCTGCTGCTGGGGCGCGCGCGGCTCCT
GGCGCTGACACGGTGCGCTGCCGCTGCCTCTGCCGCTTTTTGCGCCACTG
CTGCGACAGGCCTCGAGTCGACGTGGTGTGAGGGCGCCATCATCGCCCCA
GAACACCTGGACAAACTGCGCAGCAGCATCGTGCCGGAGGTCGCCAAGAC
AGTGGAGGGGCTGCGCAACCTGCAGCTGGACCACGCGCTGAAGGAGCACG
GCGGGTACACTCTGTCCCTGCCTGACGGGCGGGGCGGGGGGGGCAGAGTG
CTCGCGACGGCAACGGCGTACAATGCCGTCATGGCCGCCGCGAACGCCGG
GCTGGGGGAGGGTGTCTTCGCCAGCCACCACGCCAAACGCCGGGTGAACA
TCTGGTATGAGGAGCTGCCGGACGGCAGCAAGGTCAAGCACACCGAGGGC
GGGGCTTCTGTCAAAGTGAACATCTGGTATGAGGAGCTGCCGGACGGCAG
CAAGGCAAGGCTGGCGTACAAGTTCAAGGGGTGCAGCGAGGACCTCGAGC
TGTGGGCCACAACCCACCGCCTGAAGGGGGGGGGGGGTCCCTTCATCTGT
ATGCAGAAGAAAAAGCTGGTTCAAGTGGCGCTGGATTTCCACCTCTGCAG
CACCTCGGGGGTGCAGCACATGACGAAGCCTCGGTTGTTGGGGATGTCGA
GGGCCTCCGAGAAGCACTTTGAGGAGTTTGGCGGCGGTGGCAGCGTCAGC
GGCAGCGGCGGCAGCAGCAGCAGCAGCGGCGTCAGCGGCAGCAGCAGCGG
CGGATCGCCATCACACGCCGAGCACTGCTGCGAATTGACTGAGGACGGCC
ACCATGATGCGGAGTGCCACGTCGGCGATGGCGGCGGCGGCGGCGGCAGC
GGCGGCGGCACCGGCAGCGGCGGCGGCAGCGGCGGCGGCAGCGGCAGCAG
CATCGGCGGCAGCAGCAGCAGCAGCGGCGGCGGCAGCGGCGGCGACGCCG
CGGGCATGCTGCTGGTGGAGATGCAGCAGCTGAATGAGGCGCCGGAGCAG
CGGCAGCGCGACGCGCACACGCAGCGCCAGCGCCAGCTGCTCGACTTCAT
GCAGCAGCAGCAGCAGCAGAGGCTAAGCGTGGGCAGCAGCGGCATGTCGC
CAGCCTCGATGGCGCTGGCGGCAGCAGCGCCGGCGCCGGCGGCAGCAGCG
GCGTCGCCGGCGCTGCTGCCGCCTGCGCCGCCCATGGAGGCGGCGGTGGC
GAAGCCGGCGGCGGCGCAGCAGGCGAACACGGACATCGCGCGGCGCGCGG
AGGCGCTGCAGCACTACATTGCCAGGTTTGCGCGGCTGCGTGAGTTGCGC
AACGACATGGCGCGCGAGGGCCTGACGGATGCGCACTACGAGGTTGTGTA
TGTGGAGGCGCAGCTGCGCTCCGTGCGGCTGAAGATCTGCGAGCGCTCGT
GAGGCGGCGGAGCACGAGTTAGAGTCTTTCAAAGATCTCATCCTTTGGGT
CCTTAGGAGGGTCAATAGACA

protein sequence of jgi.p|Trimin1|349164

>Trimin1|349164|estExt_Genemark1.C_Ctg_370114 ID=Trimin1|349164|estExt_Genemark1.C_Ctg_370114|Name=jgi.p|Trimin1|349164|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=634bp
MSVEAVAEAARLLRFNASSAGVDRLPPLLLLGRARLLALTRCAAAASAAF
CATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHAL
KEHGGYTLSLPDGRGGGGRVLATATTYNAVMAAANAGLGEGVFASHHAKR
RVDRLPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAP
EHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRV
LATATAYNAVMAAANAGLGEGVFASHHAKRRVNIWYEELPDGSKVKHTEG
GASVKVNIWYEELPDGSKARLAYKFKGCSEDLELWATTHRLKGGGGPFIC
MQKKKLVQVALDFHLCSTSGVQHMTKPRLLGMSRASEKHFEEFGGGGSVS
GSGGSSSSSGVSGSSSGGSPSHAEHCCELTEDGHHDAECHVGDGGGGGGS
GGGTGSGGGSGGGSGSSIGGSSSSSGGGSGGDAAGMLLVEMQQLNEAPEQ
RQRDAHTQRQRQLLDFMQQQQQQRLSVGSSGMSPASMALAAAAPAPAAAA
ASPALLPPAPPMEAAVAKPAAAQQANTDIARRAEALQHYIARFARLRELR
NDMAREGLTDAHYEVVYVEAQLRSVRLKICERS*

mRNA from alignment at Contig_37:985267..990861+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_7904 ID=mRNA_7904|Name=jgi.p|Trimin1|349164|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5595bp|location=Sequence derived from alignment at Contig_37:985267..990861+ (Tribonema minus UTEX_B_3156 )
ATGTCGGTGGAGGCCGTGGCTGAGGCGGCGAGGCTCTTGAGGTTCAATGC
GTCAAGCGCTGGAGGTGAGCTGGAACGCACAAGTGACTGTAACAGTTACA
CTCTGTGAACACTTGGCGAAGTTGGCATCACAGGCATGCTACCCGTGGGT
GTTGTTAACCGGTGGCACGCTGGAGACACTTGTGCAGCGGGCGTGATGGT
TCGTCTGTGCTGGCAGACTGAGTGTATAGCAGTGCAGGCATCTTATCGTA
ACTTGTCGCAGAACTGAAGCACATCATGTCCAACTGATCTTTTGCAGTGG
GCTTCAACTGGACCAGGTGCAAGTGTGCAGTTGAGTCTGCACACATGCCA
GCAATGCTGCTCTTGGAACAACATCGCAAGCACTTGAAGTTGACCGTGCC
TTCTGCTGAACTGGCTTGCACTTGAACTTGAAGTTCAACTGCGATCCGCT
TCGCTCGTGTTATGTAGCAGTCGCATTTGAAGTTGAGGTTTGAGTGTCCT
CTCACGATCGGTTCGGCGGCAGCAGCAGTGGAGGCGCTGACTTCTCTCCG
TTTAATAGTCAGCAGACTCACACGATCGTTGCACGTATGCCACCAACTTG
CTGTGGCAGTCGGGGACTTTGAGGCTTGACTGCGTTCCTGGTTGCGACCT
CTGGTGCGTCACCTCTCAGTCGACAGGCTGCCGCCGCTGCTGCTGCTGGG
GCGCGCGCGGCTCCTGGCGCTGACACGGTGCGCTGCCGCTGCCTCTGCCG
CTTTTTGCGCCACTGCTGCGACAGGCCTCGAGTCGACGTGGTGTGAGGGC
GCCATCATTGCCCCAGAACACCTGGACAAACTGCGCAGCAGCATCGTGCC
GGAGGTCGCCAAGACAGTGGAGGGGCTGCGCAACCTGCAGCTGGACCACG
CGTTGAAGGAGCACGGCGGGTACACTCTGTCCCTGCCTGACGGGCGGGGC
GGGGGGGGCAGAGTGCTCGCGACGGCAACGACGTACAATGCCGTCATGGC
CGCCGCGAACGCCGGGCTGGGGGAGGGTGTCTTCGCCAGCCACCACGCCA
AACGCCGGGGTGAGTCACCTGGCGTTCGCAGTGGCGTACGCAGGCGCAGC
ATCTGCGCCGATCCACTGCGCGCCCGTGCCCCTCTACATTGAAGTTGAAG
TTAGTGTGTGCGTGCGTACGTGCTCTGCAGTGCAAGCGTGGTCGGTGGTG
TGCATGCGCAGGTGCAGGGTGATGGCGGCGGCGGCGGCGCTCAAGCACAG
GGTTAACGGCCAAGCGCAAGGCAGGGCGCAGTGGCGTCAAGTTGAAGTTG
TGTGTAGTTGGGGGATTGCATCTGAGCTGTCTGGCACGCATCACTCACGC
GTACGCAGGCGCAGCATCTGCGCCGTGATCACTGACAGGTCGCACTTGAG
GTTTGTGTACCAGGTGCGCAGCATCTCTTTGTGTATGTAGGAGTTGAAGT
TGGAGTTAGGTGGCCCTTATATCTCGATCTGCACCTTGCTCAGCGCTGTT
GCGCGCCATCTGCAGCAGCGCTCAACACGCGCTGTCGCCAGGCGTATGCT
GTGGCAGTCGGGGACTTTGAGGCTTGACTGCGTTCCTGGTTGCGACCTCT
GGTGCGTCACCTCTCAGTCGACAGGCTGCCGCCGCTGCTGCTGCTGGGGC
GCGCGCGGCTCCTGGCGCTGACACGGTGCGCTGCCGCTGCCTCTGCCGCT
TTTTGCGCCACTGCTGCGACAGGCCTCGAGTCGACGTGGTGTGAGGGCGC
CATCATCGCCCCAGAACACCTGGACAAACTGCGCAGCAGCATCGTGCCGG
AGGTCGCCAAGACAGTGGAGGGGCTGCGCAACCTGCAGCTGGACCACGCG
CTGAAGGAGCACGGCGGGTACACTCTGTCCCTGCCTGACGGGCGGGGCGG
GGGGGGCAGAGTGCTCGCGACGGCAACGGCGTACAATGCCGTCATGGCCG
CCGCGAACGCCGGGCTGGGGGAGGGTGTCTTCGCCAGCCACCACGCCAAA
CGCCGGGGTGAGTCACCTGGCGTTCGCAGTGGCGTACGCAGGCGCAGCAT
CTGCGCCGATCCACTGCGCGCCCGTCCCCCTCTACATTGAAGTTGAAGTT
AGTGTGTGCGTGCGTACGTGCTCTGCAGTGCAAGCGTGGTCGGTGGTGTG
CATGCGCAGGTGCAGGGTGATGGCGGCAGCGGCGGCGCTCAGGCACAGGG
TTAACGGCCAAGCGCAAGGCAGGGCGCAGTGGCGTCAAGTTGAAGTTGTG
TGTAGTTGGGGGATTGCATCTGAGCTGTCTGGCACGCATCACTCACCATG
GGCTGCGCTCAACTTTGCTCACCCCACACTCGCACCCTTGCTCTGTGGGC
GCAGTGAACACCTGGTATGAGGAGCTGCCGGACGGCAGCAAGGTCAAGCA
CACCGAGGGCGGGCTTCTGTCAAAGGTGAAGTGTGGCAGCGGCAAAGTGG
CAGATTGCATTTGTAGCATTGTGGCATTGCGTTCATGCACATGGTGTATT
TGCAAGCTTGGTGGCGGATCAAGTTGAAGTTTACACAGTGAAGGTTTTGG
TGCTAGCCTTACAAGGAACTCACTTATTGCAAGTACTTCAAGTTGACATG
CCTCTTGCTGACGACTGGACACACAGCGTAAAAACTAAGTGCAGCAGCTG
GTGCATGCACGCGCACGTGAACTGCTTGAAGCCATGGCACGCGTTTCACA
TGGTCGGCTTGCTGAGCAGCTGCAGCAGCAGCAGCGGCGCTCAACATGTG
TAGGTGCTCATGTCCCAGCTCGGGCTCTTGGTGCCTGATACCAGCCATTT
GAAGCGTGCGCAGAGACGAGTCTGCGCATGGAACCAAAGTGACTGGCTGA
AGTTCACGTACTGAGTTTCTTGTGGCAAGAGTTTTATCATGCTGTGATTA
TCAGACTATTACCATGTCACCAGCTAAGGGTTATCATTAGCCTAAGGGTT
GGCTAGCTCGCACGCACAGGGTTAACGGCCAAGCGCAAGGCAGGGCGCAG
TGGCGTCAAGTTAAAGTTGTGTGCAGTTGGGGGATTGCATCTGAGCTGTC
TGGCACGCATCACTCACCATGGGCTGCGCTCAACTTTGCTCACCCCACAC
TCGCACCCTTGCTCTGTGGGCGCAGTGAACATCTGGTATGAGGAGCTGCC
GGACGGCAGCAAGGTCAAGCACACCGAGGGCGGGGCTTCTGTCAAAGGTG
AGGTGTGGCAGCGGCAAAGTGGCAGATTGCATTTGTAGCATTGTGGCATC
GCGTTCATGCACATGGTGTATTTGCAAGCTTGGTAGCGGATCAAGTTGAA
GTTTACACAGTGAAGGTTTTGGTGCTAGCATTACAAGGAACTCACTTATT
GCAAGTACTTCAAGTTGACATGCCTCTTGCTGACGACTGGGCACACAGCG
TACAAACTAAGTGCAGCAGCTGGTGCATGCGCGCGCACGTGAACTGCTTG
AAGCCATGGCACGCGTTTCACATGGTCGGCTTGCTGAGCAGCTGCAGCAG
CAGCAGCGGCGCTCAACATGTGTAGGTGCTCATGTCCCAGCTCGGGCTCT
TGGTGCCTGATACCAGCCATTTGAAGCGTGCGCAGAGACGAGTCTGCGCA
TGGAACCAAAGTGACTGGCTGAAGTTGACGTACTGAGTTTCTTGTGGCAT
GTGTTTTATCATGCTGTGATTATCAGACCATTACCATGTCACCAGCTAAG
GGTTATCATTAGCCTAAGGGTTGGCTAGCTCGCACGCACAGGGTTAACGG
CCAAGCGCAAGGCAGGGCGCAGTGGCGTCAAGTTGAAGTTGTGTGTAGTT
GGGGGATTGCATCTGAGCTGTCTGGCACGCATCACTCACCATGGGTTGCG
CTCAACTTTGCTCACCCCACACTCGCACCCTTGCTCTGTGGGCGCAGTGA
ACATCTGGTATGAGGAGCTGCCGGACGGCAGCAAGGTCAAGCACACCGAG
GGCGGGGCTTCTGTCAAAGGTGAGGTGTGGCAGCGGCAAAGTGGCAGATT
GCATTTGTAGCATTGTGGCATTGCGTTCATGCACATGGTGTATTTGCAAG
CTTGGTAGCGGATCAAGTTGAAGTTTACACAGTGAAGGTTTTGGTGCTAG
CATTACATGGAACTCACTTATTGCAAGTACTTCAAGTTGACATGCCTCTT
GCTGACGACTGGGCACACAGCGTACAAACTATGTGCAGCAGCTGGTGCAT
GCACGCGCACGTGAACTGCTTGAAGCCATGGCACGCGTTTCACATGGTCG
GCTTGCTGAGCAGCTGCAGCAGCAGCAGCGGCACTCAACATGTGTAGGTG
CTCATGTCCCAGCTCGGGCTCTTGGTGCCTGATACCAGCCATTTGAAGCG
TGCGCAGAGACGAGTCTGCGCATGGAACCAAAGTGACTGGCTGAAGTTCA
CGTACTGAGTTTCTTGTGGCAAGTGTTTTATCATGCTGTGATTATCAGAC
CATTACCATGTCACCAGCTAAGGCTTATCATTAGCCTAAGGGTTGGCTAA
CCCCCAAGCCCTGACCCATCATGGAGGTAACACACGTGCGCCTGCACCCA
TGCTGATGCCACTTTCCGACTTGTCCAGGCAAGGCTGGCGTACAAGTTCA
AGGGGTGCAGCGAGGACCTCGAGCTGTGGGCCACAACCCACCGCCTGAAG
GGGGGGGGGGGTCCCTTCATCTGTATGCAGAAGAAAAAGCTGGTTCAAGT
GGCGCTGGATTTCCACCTCTGCAGCACCTCGGGGGTGCAGCACATGACGA
AGCCTCGGTTGTTGGGGATGTCGAGGGCCTCCGAGAAGCACTTTGAGGAG
TTTGGCGGCGGTGGCAGCGTCAGCGGCAGCGGCGGCAGCAGCAGCAGCAG
CGGCGTCAGCGGCAGCAGCAGCGGCGGATCGCCATCACACGCCGAGCACT
GCTGCGAATTGACTGAGGACGGCCACCATGATGCGGAGTGCCACGTCGGC
GATGGCGGCGGCGGCGGCGGCAGCGGCGGCGGCACCGGCAGCGGCGGCGG
CAGCGGCGGCGGCAGCGGCAGCAGCATCGGCGGCAGCAGCAGCAGCAGCG
GCGGCGGCAGCGGCGGCGACGCCGCGGGCATGCTGCTGGTGGAGATGCAG
CAGCTGAATGAGGCGCCGGAGCAGCGGCAGCGCGACGCGCACACGCAGCG
CCAGCGCCAGCTGCTCGACTTCATGCAGCAGCAGCAGCAGCAGAGGCTAA
GCGTGGGCAGCAGCGGCATGTCGCCAGCCTCGATGGCGCTGGCGGCAGCA
GCGCCGGCGCCGGCGGCAGCAGCGGCGTCGCCGGCGCTGCTGCCGCCTGC
GCCGCCCATGGAGGCGGCGGTGGCGAAGCCGGCGGCGGCGCAGCAGGCGA
ACACGGACATCGCGCGGCGCGCGGAGGCGCTGCAGCACTACATTGCCAGG
TTTGCGCGGCTGCGTGAGTTGCGCAACGACATGGCGCGCGAGGGCCTGAC
GGATGCGCACTACGAGGTTGTGTATGTGGAGGCGCAGCTGCGCTCCGTGC
GGCTGAAGATCTGCGAGCGCTCGTGAGGCGGCGGAGCACGAGTTAGAGTC
TTTCAAAGATCTCATCCTTTGGGTCCTTAGGAGGGTCAATAGACA

Coding sequence (CDS) from alignment at Contig_37:985267..990861+

>mRNA_7904 ID=mRNA_7904|Name=jgi.p|Trimin1|349164|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1902bp|location=Sequence derived from alignment at Contig_37:985267..990861+ (Tribonema minus UTEX_B_3156 )
ATGTCGGTGGAGGCCGTGGCTGAGGCGGCGAGGCTCTTGAGGTTCAATGC
GTCAAGCGCTGGAGTCGACAGGCTGCCGCCGCTGCTGCTGCTGGGGCGCG
CGCGGCTCCTGGCGCTGACACGGTGCGCTGCCGCTGCCTCTGCCGCTTTT
TGCGCCACTGCTGCGACAGGCCTCGAGTCGACGTGGTGTGAGGGCGCCAT
CATTGCCCCAGAACACCTGGACAAACTGCGCAGCAGCATCGTGCCGGAGG
TCGCCAAGACAGTGGAGGGGCTGCGCAACCTGCAGCTGGACCACGCGTTG
AAGGAGCACGGCGGGTACACTCTGTCCCTGCCTGACGGGCGGGGCGGGGG
GGGCAGAGTGCTCGCGACGGCAACGACGTACAATGCCGTCATGGCCGCCG
CGAACGCCGGGCTGGGGGAGGGTGTCTTCGCCAGCCACCACGCCAAACGC
CGGGTCGACAGGCTGCCGCCGCTGCTGCTGCTGGGGCGCGCGCGGCTCCT
GGCGCTGACACGGTGCGCTGCCGCTGCCTCTGCCGCTTTTTGCGCCACTG
CTGCGACAGGCCTCGAGTCGACGTGGTGTGAGGGCGCCATCATCGCCCCA
GAACACCTGGACAAACTGCGCAGCAGCATCGTGCCGGAGGTCGCCAAGAC
AGTGGAGGGGCTGCGCAACCTGCAGCTGGACCACGCGCTGAAGGAGCACG
GCGGGTACACTCTGTCCCTGCCTGACGGGCGGGGCGGGGGGGGCAGAGTG
CTCGCGACGGCAACGGCGTACAATGCCGTCATGGCCGCCGCGAACGCCGG
GCTGGGGGAGGGTGTCTTCGCCAGCCACCACGCCAAACGCCGGGTGAACA
TCTGGTATGAGGAGCTGCCGGACGGCAGCAAGGTCAAGCACACCGAGGGC
GGGGCTTCTGTCAAAGTGAACATCTGGTATGAGGAGCTGCCGGACGGCAG
CAAGGCAAGGCTGGCGTACAAGTTCAAGGGGTGCAGCGAGGACCTCGAGC
TGTGGGCCACAACCCACCGCCTGAAGGGGGGGGGGGGTCCCTTCATCTGT
ATGCAGAAGAAAAAGCTGGTTCAAGTGGCGCTGGATTTCCACCTCTGCAG
CACCTCGGGGGTGCAGCACATGACGAAGCCTCGGTTGTTGGGGATGTCGA
GGGCCTCCGAGAAGCACTTTGAGGAGTTTGGCGGCGGTGGCAGCGTCAGC
GGCAGCGGCGGCAGCAGCAGCAGCAGCGGCGTCAGCGGCAGCAGCAGCGG
CGGATCGCCATCACACGCCGAGCACTGCTGCGAATTGACTGAGGACGGCC
ACCATGATGCGGAGTGCCACGTCGGCGATGGCGGCGGCGGCGGCGGCAGC
GGCGGCGGCACCGGCAGCGGCGGCGGCAGCGGCGGCGGCAGCGGCAGCAG
CATCGGCGGCAGCAGCAGCAGCAGCGGCGGCGGCAGCGGCGGCGACGCCG
CGGGCATGCTGCTGGTGGAGATGCAGCAGCTGAATGAGGCGCCGGAGCAG
CGGCAGCGCGACGCGCACACGCAGCGCCAGCGCCAGCTGCTCGACTTCAT
GCAGCAGCAGCAGCAGCAGAGGCTAAGCGTGGGCAGCAGCGGCATGTCGC
CAGCCTCGATGGCGCTGGCGGCAGCAGCGCCGGCGCCGGCGGCAGCAGCG
GCGTCGCCGGCGCTGCTGCCGCCTGCGCCGCCCATGGAGGCGGCGGTGGC
GAAGCCGGCGGCGGCGCAGCAGGCGAACACGGACATCGCGCGGCGCGCGG
AGGCGCTGCAGCACTACATTGCCAGGTTTGCGCGGCTGCGTGAGTTGCGC
AACGACATGGCGCGCGAGGGCCTGACGGATGCGCACTACGAGGTTGTGTA
TGTGGAGGCGCAGCTGCGCTCCGTGCGGCTGAAGATCTGCGAGCGCTCGT
GA