Trimin1|349164|estExt_Genemark1.C_Ctg_370114 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349164
Unique NameTrimin1|349164|estExt_Genemark1.C_Ctg_370114
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length634
Homology
BLAST of jgi.p|Trimin1|349164 vs. uniprot
Match: A0A835YU94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU94_9STRA)

HSP 1 Score: 928 bits (2398), Expect = 0.000e+0
Identity = 633/633 (100.00%), Postives = 633/633 (100.00%), Query Frame = 0
Query:    1 MSVEAVAEAARLLRFNASSAGVDRLPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRVLATATTYNAVMAAANAGLGEGVFASHHAKRRVDRLPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRVLATATAYNAVMAAANAGLGEGVFASHHAKRRVNIWYEELPDGSKVKHTEGGASVKXXXXXXXXXXXXXARLAYKFKGCSEDLELWATTHRLKGGGGPFICMQKKKLVQVALDFHLCSTSGVQHMTKPRLLGMSRASEKHFEEFGGGGSVSGXXXXXXXXXXXXXXXXGSPSHAEHCCELTEDGHHDAECHVGDGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGMLLVEMQQLNEAPEQRQRDAHTQRQRQLLDFMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPALLPPAPPMEAXXXXXXXXXXXNTDIARRAEALQXXXXXXXXXXXXXXXXXXEGLTDAHYEVVYVEAQLRSVRLKICERS 633
            MSVEAVAEAARLLRFNASSAGVDRLPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRVLATATTYNAVMAAANAGLGEGVFASHHAKRRVDRLPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRVLATATAYNAVMAAANAGLGEGVFASHHAKRRVNIWYEELPDGSKVKHTEGGASVKXXXXXXXXXXXXXARLAYKFKGCSEDLELWATTHRLKGGGGPFICMQKKKLVQVALDFHLCSTSGVQHMTKPRLLGMSRASEKHFEEFGGGGSVSGXXXXXXXXXXXXXXXXGSPSHAEHCCELTEDGHHDAECHVGDGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGMLLVEMQQLNEAPEQRQRDAHTQRQRQLLDFMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPALLPPAPPMEAXXXXXXXXXXXNTDIARRAEALQXXXXXXXXXXXXXXXXXXEGLTDAHYEVVYVEAQLRSVRLKICERS
Sbjct:    1 MSVEAVAEAARLLRFNASSAGVDRLPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRVLATATTYNAVMAAANAGLGEGVFASHHAKRRVDRLPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRVLATATAYNAVMAAANAGLGEGVFASHHAKRRVNIWYEELPDGSKVKHTEGGASVKXXXXXXXXXXXXXARLAYKFKGCSEDLELWATTHRLKGGGGPFICMQKKKLVQVALDFHLCSTSGVQHMTKPRLLGMSRASEKHFEEFGGGGSVSGXXXXXXXXXXXXXXXXGSPSHAEHCCELTEDGHHDAECHVGDGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGMLLVEMQQLNEAPEQRQRDAHTQRQRQLLDFMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPALLPPAPPMEAXXXXXXXXXXXNTDIARRAEALQXXXXXXXXXXXXXXXXXXEGLTDAHYEVVYVEAQLRSVRLKICERS 633          
BLAST of jgi.p|Trimin1|349164 vs. uniprot
Match: A0A836CEA0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEA0_9STRA)

HSP 1 Score: 140 bits (353), Expect = 1.300e-31
Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 0
Query:  155 LPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGG 247
            LP LLLL RARLLALTRCAAAA+AAFCATAATGLE+TWCEGAIIA  HL+ LRS+IVPEVA++ E L +LQLD A  EHGGYTLSLPDGRGGG
Sbjct:  413 LPLLLLLERARLLALTRCAAAAAAAFCATAATGLEATWCEGAIIAAAHLEALRSTIVPEVAESTEELCDLQLDRAKNEHGGYTLSLPDGRGGG 505          
BLAST of jgi.p|Trimin1|349164 vs. uniprot
Match: A0A835Z259_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z259_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 2.960e-6
Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 0
Query:  418 GSPSHAEHCCELTEDGHHDAECHVGDGGG 446
            GSPSHAEHC ELTEDGHHDAECHVGDG G
Sbjct:  379 GSPSHAEHCFELTEDGHHDAECHVGDGSG 407          
BLAST of jgi.p|Trimin1|349164 vs. uniprot
Match: A0A835ZCQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCQ5_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 9.790e-6
Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = 0
Query:  282 VNIWYEELPDGSKVKHTEGGASVK 305
            +NIWYEELPDGSKVKHTEGGASVK
Sbjct:    7 LNIWYEELPDGSKVKHTEGGASVK 30          
BLAST of jgi.p|Trimin1|349164 vs. uniprot
Match: A0A835Z2T7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2T7_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.010e-5
Identity = 39/94 (41.49%), Postives = 48/94 (51.06%), Query Frame = 0
Query:  187 GLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRVLATATAYNAVMAAANAGLGEGVFASHHAKR 280
            G  +TWCEGA + P+HL  +R  IV  +A   + L  L L  +  +HG Y L + D R       A   AY AV AAA AGLG   F SH   R
Sbjct:  222 GKAATWCEGADVQPQHLAAVRR-IVQNLAPAKQDLHGLALGESANKHGAYYLHVHDKR-------APVAAYEAVQAAATAGLGLNTFDSHFRSR 307          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349164 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YU94_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEA0_9STRA1.300e-3180.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z259_9STRA2.960e-693.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCQ5_9STRA9.790e-695.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z2T7_9STRA1.010e-541.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 457..479
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 425..441
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..522
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..421

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_37contigContig_37:985267..990792 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349164mRNA_7904Tribonema minus UTEX_B_3156 mRNAContig_37 985267..990861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349164|estExt_Genemark1.C_Ctg_370114 ID=Trimin1|349164|estExt_Genemark1.C_Ctg_370114|Name=jgi.p|Trimin1|349164|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=634bp
MSVEAVAEAARLLRFNASSAGVDRLPPLLLLGRARLLALTRCAAAASAAF
CATAATGLESTWCEGAIIAPEHLDKLRSSIVPEVAKTVEGLRNLQLDHAL
KEHGGYTLSLPDGRGGGGRVLATATTYNAVMAAANAGLGEGVFASHHAKR
RVDRLPPLLLLGRARLLALTRCAAAASAAFCATAATGLESTWCEGAIIAP
EHLDKLRSSIVPEVAKTVEGLRNLQLDHALKEHGGYTLSLPDGRGGGGRV
LATATAYNAVMAAANAGLGEGVFASHHAKRRVNIWYEELPDGSKVKHTEG
GASVKVNIWYEELPDGSKARLAYKFKGCSEDLELWATTHRLKGGGGPFIC
MQKKKLVQVALDFHLCSTSGVQHMTKPRLLGMSRASEKHFEEFGGGGSVS
GSGGSSSSSGVSGSSSGGSPSHAEHCCELTEDGHHDAECHVGDGGGGGGS
GGGTGSGGGSGGGSGSSIGGSSSSSGGGSGGDAAGMLLVEMQQLNEAPEQ
RQRDAHTQRQRQLLDFMQQQQQQRLSVGSSGMSPASMALAAAAPAPAAAA
ASPALLPPAPPMEAAVAKPAAAQQANTDIARRAEALQHYIARFARLRELR
NDMAREGLTDAHYEVVYVEAQLRSVRLKICERS*
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