mRNA_7590 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|350886
Unique NamemRNA_7590
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A836C8F8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F8_9STRA)

HSP 1 Score: 417 bits (1071), Expect = 1.020e-145
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 2
Query:    8 MVPVRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVYDTTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHNKEVKLLSLGDIAKQLDTPPPAPAKS 643
            MVPVRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVYDTTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHNKEVKLLSLGDIAKQLDTPPPAPAKS
Sbjct:    1 MVPVRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVYDTTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHNKEVKLLSLGDIAKQLDTPPPAPAKS 212          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A6H5KTH9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTH9_9PHAE)

HSP 1 Score: 242 bits (618), Expect = 1.710e-74
Identity = 122/210 (58.10%), Postives = 162/210 (77.14%), Query Frame = 2
Query:    8 MVPVRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVY--DTTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHN--KEVKLLSLGDIAKQLDTPP 625
            +VPV +++L  +V  IQ L PYL+EVEYLITS++W YL+GFLGVF+  EE+FV LIDG+YPT+ P D SSR++MQ EAQNVFLA+DDL  AS  K+ K +EK++VKLAL+YDRFLKAG +V  YDP+++TE F++ IPD  L Y  D+  P  ++D +LILKGPDKGRT  ++GVIKSR +A+VRMD    +E+++L L DIA+QL   P
Sbjct:  168 LVPVSNDKLAKSVETIQGLAPYLDEVEYLITSRSWDYLKGFLGVFATCEEDFVALIDGMYPTDKPVDVSSRDSMQLEAQNVFLAVDDLYQASMAKKVKGSEKAYVKLALSYDRFLKAGNIVPAYDPVSNTEKFFTDIPDEMLRYERDSKVPLTVRDAVLILKGPDKGRTAIVVGVIKSRNQAVVRMDGTLTREMRILELSDIARQLPDDP 377          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A7S2RHK3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHK3_9STRA)

HSP 1 Score: 171 bits (433), Expect = 7.860e-47
Identity = 91/208 (43.75%), Postives = 136/208 (65.38%), Query Frame = 2
Query:   50 KIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVYDTTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHNK---------EVKLLSLGDIAKQL-DTPPPAPAKS 643
            +I+ L  YLEE+E  I ++ W  L  ++GVF +QE  F ++ID L  +++ AD+ ++ AM+YEA+ +FL LD +  A+R++  + AEKS+V+LA+AYDRFLKA  L   YD  T T   Y SIP+  LVYD   PP ++D++LI+ GPDKGRTG+LIGV  +  + +VR+++ K         EVK++ L ++AK + D P  A  KS
Sbjct:  169 RIKVLYAYLEEMERDIFARKWDTLSSYIGVFEKQELAFENIIDSLRTSQAAADRDAKRAMEYEARQMFLTLDAMAEATRFRDIRQAEKSYVQLAIAYDRFLKAADLYDVYDD-TDTSKLYESIPEDLLVYDREDPPRVQDDVLIIAGPDKGRTGKLIGVSDASSKGVVRVEYRKRTASKDASFEVKVVDLQNVAKTIPDKPQDAQLKS 375          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A7S2UZ25_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ25_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.120e-41
Identity = 92/213 (43.19%), Postives = 132/213 (61.97%), Query Frame = 2
Query:   17 VRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPI---TSTEPFYSSIPDSALVYD-----------TTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHNKEVKLLSLGDIAKQL 613
            V  + L  A  KIQAL PY++EVE  I  + W  + GFLGVFSEQE+ FV+LIDGL+P+ SP D  SRE+MQYEAQ +FLALD+L  A++ K+ + +  ++ KLA +Y RFL+A  LV   D     TST     ++ DS +  +           T + PE +D +L++ GPDKGR G+L+  I+   +A+V++D  KEV  + L  + KQ+
Sbjct:  176 VGKSDLAEAKIKIQALQPYVDEVENYIYEERWPLMGGFLGVFSEQEDQFVNLIDGLFPSNSPLDTISRESMQYEAQRMFLALDELREAAKLKQVRISRDAYSKLAKSYFRFLEAAALVPKVDLAQLATST-----NLNDSEMEMEAEEKYEERKQSTLERPEPRDEVLLVSGPDKGRLGKLVA-IEINGKAVVKLDITKEVIEVPLESVVKQV 382          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A7R9U506_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U506_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.590e-40
Identity = 75/168 (44.64%), Postives = 117/168 (69.64%), Query Frame = 2
Query:   26 NQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVYDTTKPPELKDNILILKGPDKGRTGRLIGVI 529
            +++ TA  KI AL PY++E+E  I + ++  L+ FL VFS+QE++FV  IDG+    +    ++ EAM++EA+ +FLALD++  A+  ++    +K ++KLALAYDR+LKA   +  YD I STE ++++IPD  LV+DT K PE +D ++ ++GPDKGRTG L+G I
Sbjct:  112 SEIATARRKIAALKPYMDEIERYIFTNDYEPLRAFLNVFSQQEDSFVKTIDGVASRGTADAIAAAEAMEHEAKQLFLALDEIRKAATLEKPSGLKKGYIKLALAYDRYLKASDNLPGYDKIVSTEKYFANIPDEWLVFDTEKKPEPQDPVIFIEGPDKGRTGVLLGYI 279          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A6U4CV34_9STRA (Hypothetical protein n=10 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CV34_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.880e-36
Identity = 80/179 (44.69%), Postives = 116/179 (64.80%), Query Frame = 2
Query:   23 DNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGL-YPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAG-GLVQTYDPITSTEPFYSSIPDSALVYDTTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIV 553
            ++++  A  KI AL PYL+E++  I ++++  L+ FL VFS QEE F+  I+ +   +  PA   + EAM++EA+ +FLALDD+  A+  ++  A +K ++KLALAYDR+LKA   L   YD + STE F++ +PD  LVYDT   P   D +L + GPDKGRTG L+G  KSR  A V
Sbjct:  116 NSEVRKAREKIAALKPYLDEIQRYIYTEDYAPLRAFLNVFSAQEEAFLTTIESVGSASRGPAASVTAEAMEHEAKEIFLALDDIRKAATLQKPVALKKGYIKLALAYDRYLKASDNLPLGYDNVVSTEKFFADVPDEWLVYDTETLPVSLDPVLFIAGPDKGRTGILLGY-KSRPIADV 293          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A7S3Y3I2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3I2_HETAK)

HSP 1 Score: 129 bits (324), Expect = 9.810e-32
Identity = 71/218 (32.57%), Postives = 127/218 (58.26%), Query Frame = 2
Query:   14 PVRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVY--DTTKPPELKDNILILKGPDKGRTGRLIGVIKS-------RQEAIVRMDHN-------KEVKLLSLGDIAKQLDT 619
            P ++  L+    +++ +   L+E++  I +++W ++  +   F      F    D  +  E  AD+ SR A++YE   +F A++ L  A+  K  + A+ +F ++++AYDR+LKAG L   YDP+TSTE F++ +PDSAL +      PP++KD +L+  GPDKG+TG LIG+ ++       ++  IV++D+        +E+K++    +AK+LDT
Sbjct:   78 PAKEAALKGYGDRLRRIARTLDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRLDT 295          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: D7FKJ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ3_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 4.420e-31
Identity = 68/199 (34.17%), Postives = 120/199 (60.30%), Query Frame = 2
Query:   50 KIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVY--DTTKPPELKDNILILKGPDKGRTGRLIGV---IKSRQEAIVRMDHN-----KEVKLLSLGDIAKQLD 616
            K++     L+E++  I++ +W  +  +   F      F    D  +PT+ P D +SR A++YE    + A++ L  A+  + ++ A+ +F  +++AYDR+LKAG L   YD +TSTE FY+ + +S+L Y   +  PP++KDN+L++ GPDKG+TG +IGV     S  +AIV+++ +     +E+K++ L  +AK +D
Sbjct:  133 KLRRAAKMLDELQDDISNSDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYADVSNSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGVEGGSLSATKAIVKLETSSALGMREIKVVPLDYVAKTVD 331          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A7S3Y3T3_HETAK (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3T3_HETAK)

HSP 1 Score: 127 bits (320), Expect = 2.800e-29
Identity = 69/198 (34.85%), Postives = 118/198 (59.60%), Query Frame = 2
Query:   74 LEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVY--DTTKPPELKDNILILKGPDKGRTGRLIGVIKS-------RQEAIVRMDHN-------KEVKLLSLGDIAKQLDT 619
            L+E++  I +++W ++  +   F      F    D  +  E  AD+ SR A++YE   +F A++ L  A+  K  + A+ +F ++++AYDR+LKAG L   YDP+TSTE F++ +PDSAL +      PP++KD +L+  GPDKG+TG LIG+ ++       ++  IV++D+        +E+K++    +AK+LDT
Sbjct:  607 LDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRLDT 804          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A0G4GSY0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GSY0_VITBC)

HSP 1 Score: 119 bits (298), Expect = 1.220e-27
Identity = 64/198 (32.32%), Postives = 115/198 (58.08%), Query Frame = 2
Query:   50 KIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVY--DTTKPPELKDNILILKGPDKGRTGRLIGV-----IKSRQEAIVRMDHN----KEVKLLSLGDIAKQ 610
            +I+ +   L+E++  I  ++W  L  +          F    D  +P + P D+++R A++YE   +F +++ L  A   K  +  E++F  +++++DR+LKAG L + YDPI STE F+  + DS LVY      PP+++D +L+L+GPDKG+TG L+GV      K +++ +V++D      +E+K++    IAK+
Sbjct:  111 RIRQIATVLDELQADIYDEDWDILASYPQQLRAYVPIFTKYTDSAFPGKDPVDENTRFALRYEVGRLFGSVERLKRAVDKKDVRETEEAFAAMSVSFDRYLKAGDLYEVYDPIISTEKFFEGVEDSQLVYVPPLRDPPKIRDQVLLLRGPDKGKTGILLGVEGDEVAKVKRKGVVKLDTKVGSIRELKVVPYAFIAKR 308          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A835YWD8_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWD8_9STRA)

HSP 1 Score: 833 bits (2153), Expect = 1.990e-301
Identity = 531/531 (100.00%), Postives = 531/531 (100.00%), Query Frame = 1
Query:    1 MSDVFVRSEDTVERACDNCYIHKRRCTGDGVPPCAACVQKGLDCSYSPSYDRAPARTVHLCDRTCASMTPHRTRRCLPPSALAPXXXXXXXXXXRAVRTSRPXXXXTLDADADDEAALPLKRPSTXXXXXXXXXXXXTRPPLPPGAGGWDAAAWGCGSDQLAAPLTHVPRLSPSSATGLLGLREHHFLAAFVSAYAATLIQYEAEFQPAIVEIMRAAGXXXXXXXXXXXSGRGDLPLADAAPPSAPQASLCSLWTAISVGAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRFGAMVQGASVYAPEVRGYLRCAERAAHAAHQREGPTLTTLHAFMMLTNVYVMLEDFNKLGVYLETTTDIAKSNPNPSPAHESETAGGAPHPSVSRAPFVYISPHARDXXXXXXXXXXXXXXSIARAHARALARLHDRDELHATVSVPPPLQENTWFLLESSAADSQPGRGAALRLAPGLIARSGHNTHLEASLLNAVADCELYGSEGAHTLLSGRHLRG 1593
            MSDVFVRSEDTVERACDNCYIHKRRCTGDGVPPCAACVQKGLDCSYSPSYDRAPARTVHLCDRTCASMTPHRTRRCLPPSALAPXXXXXXXXXXRAVRTSRPXXXXTLDADADDEAALPLKRPSTXXXXXXXXXXXXTRPPLPPGAGGWDAAAWGCGSDQLAAPLTHVPRLSPSSATGLLGLREHHFLAAFVSAYAATLIQYEAEFQPAIVEIMRAAGXXXXXXXXXXXSGRGDLPLADAAPPSAPQASLCSLWTAISVGAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRFGAMVQGASVYAPEVRGYLRCAERAAHAAHQREGPTLTTLHAFMMLTNVYVMLEDFNKLGVYLETTTDIAKSNPNPSPAHESETAGGAPHPSVSRAPFVYISPHARDXXXXXXXXXXXXXXSIARAHARALARLHDRDELHATVSVPPPLQENTWFLLESSAADSQPGRGAALRLAPGLIARSGHNTHLEASLLNAVADCELYGSEGAHTLLSGRHLRG
Sbjct:    1 MSDVFVRSEDTVERACDNCYIHKRRCTGDGVPPCAACVQKGLDCSYSPSYDRAPARTVHLCDRTCASMTPHRTRRCLPPSALAPXXXXXXXXXXRAVRTSRPXXXXTLDADADDEAALPLKRPSTXXXXXXXXXXXXTRPPLPPGAGGWDAAAWGCGSDQLAAPLTHVPRLSPSSATGLLGLREHHFLAAFVSAYAATLIQYEAEFQPAIVEIMRAAGXXXXXXXXXXXSGRGDLPLADAAPPSAPQASLCSLWTAISVGAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRFGAMVQGASVYAPEVRGYLRCAERAAHAAHQREGPTLTTLHAFMMLTNVYVMLEDFNKLGVYLETTTDIAKSNPNPSPAHESETAGGAPHPSVSRAPFVYISPHARDXXXXXXXXXXXXXXSIARAHARALARLHDRDELHATVSVPPPLQENTWFLLESSAADSQPGRGAALRLAPGLIARSGHNTHLEASLLNAVADCELYGSEGAHTLLSGRHLRG 531          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A836CEN4_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEN4_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.220e-8
Identity = 62/211 (29.38%), Postives = 81/211 (38.39%), Query Frame = 1
Query:   34 VERACDNCYIHKRRCTGDGVPPCAACVQKGLDCSYSPSYDRAPARTVHLCDRTCASMTPHRTRRCLPPSALAPXXXXXXXXXXRAVRTSRPXXXXTLDADADDEAALPLKRPSTXXXXXXXXXXXXTRPPLPPGAGGWD-----AAAWGCGSDQLAAPLTHVPRLSPSSATGLLGLREHHFLAAFVSAYAATLIQYEAEFQPAIVEIMRAA 651
            V+ ACD+C+  KR+C+G    PC+ C  KG+ C +S    R P R   + +                                              DAD  D+AA                      P L  G+GG       + A        + PLT  PR+SPS+ATGLLGLREH FL A+  AYA      E E Q AI ++M  A
Sbjct:   40 VKAACDHCHRRKRKCSG--TEPCSRCQAKGIVCVFSMRSKRGPKRKRRVSEXXXXXXXXXXXXX-------------------------------XADADYGDDAA----------------SRDTPSPRLDRGSGGSSDQGGTSTAVTLHRAHASRPLTKYPRMSPSAATGLLGLREHGFLNAYCMAYAGIHFVDEPEMQSAIAQLMADA 201          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8F8_9STRA1.020e-145100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KTH9_9PHAE1.710e-7458.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2RHK3_9STRA7.860e-4743.75Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2UZ25_9STRA1.120e-4143.19Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9U506_9STRA1.590e-4044.64Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U4CV34_9STRA2.880e-3644.69Hypothetical protein n=10 Tax=Phaeomonas parva Tax... [more]
A0A7S3Y3I2_HETAK9.810e-3232.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7FKJ3_ECTSI4.420e-3134.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3Y3T3_HETAK2.800e-2934.85Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
A0A0G4GSY0_VITBC1.220e-2732.32Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]

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BLAST of jgi.p|Trimin1|350886 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YWD8_9STRA1.990e-301100.00Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A836CEN4_9STRA1.220e-829.38Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_75contigContig_75:91498..94789 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|350886|estExt_Genemark1.C_Ctg_750012
Max annot lvl2759|Eukaryota
EggNOG OGs2BGND@1|root,2S19T@2759|Eukaryota
Evalue8.34e-33
Seed ortholog2880.D7FKJ3
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTranslation protein SH3-like domain
Ec32 orthologEc-12_002220.1
TranscriptId351208
TrackFilteredModels1
ProteinId350886
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350886gene_7590Tribonema minus UTEX_B_3156 geneContig_75 91498..94789 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350886Trimin1|350886|estExt_Genemark1.C_Ctg_750012Tribonema minus UTEX_B_3156 polypeptideContig_75 91757..94782 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7590_4exon_7590_4Tribonema minus UTEX_B_3156 exonContig_75 91498..91893 -
exon_7590_3exon_7590_3Tribonema minus UTEX_B_3156 exonContig_75 92433..92501 -
exon_7590_2exon_7590_2Tribonema minus UTEX_B_3156 exonContig_75 92816..93044 -
exon_7590_1exon_7590_1Tribonema minus UTEX_B_3156 exonContig_75 94579..94789 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_7590UTR3_7590Tribonema minus UTEX_B_3156 three_prime_UTRContig_75 91498..91756 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7590CDS_7590Tribonema minus UTEX_B_3156 CDSContig_75 94579..94782 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_7590UTR5_7590Tribonema minus UTEX_B_3156 five_prime_UTRContig_75 94783..94789 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7590 ID=mRNA_7590|Name=jgi.p|Trimin1|350886|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=905bp|location=Sequence derived from alignment at Contig_75:91498..94789- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTTCAACATGGTGCCAGTGCGCGACAACCAGCTGGAGACGGCTGTGGCCA
AAATACAGGCTCTTAACCCCTACCTGGAGGAAGTGGAATACCTGATCACA
TCCAAGAACTGGGGGTATTTGCAGGGGTTTCTGGGGGTGTTCTCGGAGCA
GGAGGAGAATTTTGTGGACCTGATTGATGGGCTCTATCCCACGGAGAGCC
CTGCCGACAAGAGCTCGCGCGAGGCGATGCAGTACGAGGCGCAGAACGTG
TTTCTTGCGCTGGATGACCTCAACACAGCGTCGCGATACAAGCGCGCCAA
GGCCGCCGAGAAGAGCTTTGTCAAGCTCGCACTCGCATATGACCGCTTCC
TCAAGGCCGGGGGGCTGGTGCAGACGTACGACCCCATCACGTCTACGGAG
CCCTTCTACTCCAGCATTCCGGATAGCGCGCTTGTGTACGATACCACCAA
GCCTCCAGAGTTGAAGGACAACATCCTCATACTTAAGGGGCCCGACAAGG
GTCGGACAGGCAGATTAATAGGCGTCATAAAGTCAAGGCAGGAGGCGATA
GTGCGCATGGACCACAACAAGGAGGTCAAGCTGCTGAGCCTTGGCGACAT
TGCCAAGCAGCTGGACACACCGCCGCCCGCACCAGCAAAGTCATAGCGGC
CAGCAGCTGCAGCAGCGGCAGCTGTCGCAGTGCACACATCAATTCGATGA
ACGAGTCGTATGTAAGCATTTACCAGGGCGGGTGGCGCCGACGCGCGGGC
CCAATCTGTACTGCCTATTAATGATGTTGTGGATGATGGTTGCGTTCGCT
GTTGCCAGCGCCAGGTACATGTGCCGGATTGCGCGTACTAGGATCACGTG
CATCGTGTATACCCAGGTCAGATTCACATCTTCAATCATATGTTTTTGTA
ACCTG
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protein sequence of jgi.p|Trimin1|350886

>Trimin1|350886|estExt_Genemark1.C_Ctg_750012 ID=Trimin1|350886|estExt_Genemark1.C_Ctg_750012|Name=jgi.p|Trimin1|350886|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=213bp
MVPVRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEE
NFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAA
EKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVYDTTKPP
ELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHNKEVKLLSLGDIAK
QLDTPPPAPAKS*
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mRNA from alignment at Contig_75:91498..94789-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7590 ID=mRNA_7590|Name=jgi.p|Trimin1|350886|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3292bp|location=Sequence derived from alignment at Contig_75:91498..94789- (Tribonema minus UTEX_B_3156 )
CTTCAACATGGTGCCAGTGCGCGACAACCAGCTGGAGACGGCTGTGGCCA AAATACAGGCTCTTAACCCCTACCTGGAGGAAGTGGAATACCTGATCACA TCCAAGAACTGGGGGTATTTGCAGGGGTTTCTGGGGGTGTTCTCGGAGCA GGAGGAGAATTTTGTGGACCTGATTGATGGGCTCTATCCCACGGAGAGCC CTGCCGACAAGGTACGCTGCACGTCGTGTGCCAAAGCTTCAATAAATGTT GAAGTTAGAACTGAGCATTACCAGAGCGAACACATGGCCCACAATGAATG TCGGATGTACTATGCTACGTGTGCATCACCTGAGCAGCTGGACACACACC ATCAGTTATGTGGTTTTGAAATTTGAAAGGTTGGCAACTGTGGCTTGTGA CTTGGCATTACAAAGAGAACGCTGCAATTCTCAGAAGTTGCTGGGGTGCT ACAGTTTCTGCAGTACCCTTACACGTGCCTAACTTCACATTGCAGCCAAC CAATAGAGAGGCCTGTACACTAAGTGGTCGGCCATGGCGATGTTGATCTG AGTAGAGTTGCAGTACAGTTCACCTCATTCTTCTTCTTGATTATGATTTC AGGACTGCATACTTGGCCTTACACTCGGCCAATCAATGCCAATATCTCGT GCGCTGACAAGAGTACTGCGAAGCATGACGTGAACACATGGACAGGGAAG TCACTCGCTTTATCTGCAGCTTCCACACCCACCAATTGGACAAAAGTGAC AGTACGTGAAGACAGAACATGTGATGCGCACACAGCGATGGCGCGCTGGG GCTGGGCATGTTAGCAAAAATTTCAGTAGCAACAACAAGCAGCAACAGCA GGCAGCTTTGTCGAGCATTATAAACATTTGCTGATTATGCACCTGCTGGC CTACTGGTCAGTCGCTTCATGTGAAGCCTCAAAGAACGCCTGCAGAGCAC AACACATCAACATGGAAGAAATTGGGTTGGGTTGATTTCAATGCGCATAT GTTGAAGACAGGATATAATTGGTTTGCAATATCAGTGACGGCCCATGCAG CACCTGAACTACCACTGTTCAAGTTATTTGCTGGCACCTTGCTGAGACTA GCCTTCGCGTGTGTTTCCTGCTGGCATTCGTGTTGGCAAGCAGCAAATGG TGTTTAGCTGTTTTCAGTGTGCTTGCGGTGGCGCTCATCTATCTGCTGTA CACCACTCCACTTCAGCTGCGCAGCCCTGCCCCCCTCCTTATGAATATTT GTTGGACAAGTGAGACCGTAGTTGCCATGCAGCACTTACTTCACAGGTGA AGTTGGTGTTTGACAGGTGAAGTCAACAACACCAACACACAACAACACAC GCTGGTCACCGCCAAACCCTAAACCTAACCCTCAATAACGACTTCATAGG AGGAGCAGTGACATTGGAGGCATCGGATTGGTGATGCGTACAACGATGCC TAGACCGCACATCTGGCGAAGGTGCATACACGACCACTTGCAGCGCGCAA GCTCGATACTGCACTACACCACCACACACGTGCAACTGCAACTCACCCAT TTTGTACTCATGATGTACAGAGATTTTCTAAGTCCTCACTAACGACTGAG CCTGGCGCCTACACACGGAGCTCGCGCACAGCAATGCAGTATGACCCCCA TAACATCACCATGCACCATACAGAACCACACTGCACATACGCAAAGAGCT CCGGTCACCCCCGTCACCGCTCCTGGCTGCCGTCAACTCCCTCAGAGCTC GCGCGAGGCGATGCAGTACGAGGCGCAGAACGTGTTTCTTGCGCTGGATG ACCTCAACACAGCGTCGCGATACAAGCGCGCCAAGGCCGCCGAGAAGAGC TTTGTCAAGCTCGCACTCGCATATGACCGCTTCCTCAAGGCCGGGGGGCT GGTGCAGACGTACGACCCCATCACGTCTACGGAGCCCTTCTACTCCAGCA TTCCGGATAGCGCGCTTGTGTACGGTGAGTAAGGGGCCGACGCGTAGCTT CTGTAACTTTGGCAGTCGCTGTTCAACTTCAACTTCAAGGTCAAGTGATT GCTGCCTCAGTGCCTCGGTGGCATCATCTGTTGTCTGTACTGTGCCTGCC CCGACGTTCCAATATTTTTTGCTCACTTTCGTATGCCACTTCACTACATG GCACTAAACGCCACTTTTTGCGTGTGCATGTATGAATGAAAAACGAATCA AAATATCGTCGAGCTCTAGGTGACAAGGGATGGTTAGCCCTCAAGTGCCT TCCACCAATATATGTGCTTTTGCATCTGTTGATTGCAGATACCACCAAGC CTCCAGAGTTGAAGGACAACATCCTCATACTTAAGGGGCCCGACAAGGGT CGGACAGGTGAGGCGACAGCATTGCATGTTGCACTTCGTGTATACTTCAA GCGTGTCTGGCTTCCGCCCTCGTGCAGATGGGGGCAGCTTGATACGTGCG TGGGTACAAATGTTGGCATGTCACTTCAAATTGACATTTCAAGTTGACAT ATGCCAGCCCAGCATGACCAGTGGTGCTGTGCGGACACATGCACATCTGT TTACTAGCGCACCCTCTCTGTTTCGATGCATTTTCGAATGCACCACAATA ACCATGCACAGGGAGCTGTTGCAAGAGCGTTTTTTCACGAAGCGGTTTTT CAACTTTGCCGCATGTCGGGCATCATTGTGGACGTCACAGCGCATACGAG CATGCATACATGCCTTCAAGCATTGCCCTGGATACTTGCGACTCGCATGG CCCTCCATATGGGCCTGCATTGCGCCCCTGCAGGCGGGTTTGTAGGCGCA GCGAAAGGGAGCTGCCAGACATGACGGCACATGATGGCAGCTGTAACACC ACACTGACAGCGCGTTGTCATCTGTTGACTGCTTTTGTCACTACAGGCAG ATTAATAGGCGTCATAAAGTCAAGGCAGGAGGCGATAGTGCGCATGGACC ACAACAAGGAGGTCAAGCTGCTGAGCCTTGGCGACATTGCCAAGCAGCTG GACACACCGCCGCCCGCACCAGCAAAGTCATAGCGGCCAGCAGCTGCAGC AGCGGCAGCTGTCGCAGTGCACACATCAATTCGATGAACGAGTCGTATGT AAGCATTTACCAGGGCGGGTGGCGCCGACGCGCGGGCCCAATCTGTACTG CCTATTAATGATGTTGTGGATGATGGTTGCGTTCGCTGTTGCCAGCGCCA GGTACATGTGCCGGATTGCGCGTACTAGGATCACGTGCATCGTGTATACC CAGGTCAGATTCACATCTTCAATCATATGTTTTTGTAACCTG
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Coding sequence (CDS) from alignment at Contig_75:91498..94789-

>mRNA_7590 ID=mRNA_7590|Name=jgi.p|Trimin1|350886|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=639bp|location=Sequence derived from alignment at Contig_75:91498..94789- (Tribonema minus UTEX_B_3156 )
ATGGTGCCAGTGCGCGACAACCAGCTGGAGACGGCTGTGGCCAAAATACA
GGCTCTTAACCCCTACCTGGAGGAAGTGGAATACCTGATCACATCCAAGA
ACTGGGGGTATTTGCAGGGGTTTCTGGGGGTGTTCTCGGAGCAGGAGGAG
AATTTTGTGGACCTGATTGATGGGCTCTATCCCACGGAGAGCCCTGCCGA
CAAGAGCTCGCGCGAGGCGATGCAGTACGAGGCGCAGAACGTGTTTCTTG
CGCTGGATGACCTCAACACAGCGTCGCGATACAAGCGCGCCAAGGCCGCC
GAGAAGAGCTTTGTCAAGCTCGCACTCGCATATGACCGCTTCCTCAAGGC
CGGGGGGCTGGTGCAGACGTACGACCCCATCACGTCTACGGAGCCCTTCT
ACTCCAGCATTCCGGATAGCGCGCTTGTGTACGATACCACCAAGCCTCCA
GAGTTGAAGGACAACATCCTCATACTTAAGGGGCCCGACAAGGGTCGGAC
AGGCAGATTAATAGGCGTCATAAAGTCAAGGCAGGAGGCGATAGTGCGCA
TGGACCACAACAAGGAGGTCAAGCTGCTGAGCCTTGGCGACATTGCCAAG
CAGCTGGACACACCGCCGCCCGCACCAGCAAAGTCATAG
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