Trimin1|350886|estExt_Genemark1.C_Ctg_750012 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350886
Unique NameTrimin1|350886|estExt_Genemark1.C_Ctg_750012
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length213
Homology
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A836C8F8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F8_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 2.180e-147
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
Query:    1 MVPVRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVYDTTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHNKEVKLLSLGDIAKQLDTPPPAPAKS 212
            MVPVRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVYDTTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHNKEVKLLSLGDIAKQLDTPPPAPAKS
Sbjct:    1 MVPVRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVYDTTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHNKEVKLLSLGDIAKQLDTPPPAPAKS 212          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A6H5KTH9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTH9_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 1.010e-75
Identity = 122/210 (58.10%), Postives = 162/210 (77.14%), Query Frame = 0
Query:    1 MVPVRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVY--DTTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHN--KEVKLLSLGDIAKQLDTPP 206
            +VPV +++L  +V  IQ L PYL+EVEYLITS++W YL+GFLGVF+  EE+FV LIDG+YPT+ P D SSR++MQ EAQNVFLA+DDL  AS  K+ K +EK++VKLAL+YDRFLKAG +V  YDP+++TE F++ IPD  L Y  D+  P  ++D +LILKGPDKGRT  ++GVIKSR +A+VRMD    +E+++L L DIA+QL   P
Sbjct:  168 LVPVSNDKLAKSVETIQGLAPYLDEVEYLITSRSWDYLKGFLGVFATCEEDFVALIDGMYPTDKPVDVSSRDSMQLEAQNVFLAVDDLYQASMAKKVKGSEKAYVKLALSYDRFLKAGNIVPAYDPVSNTEKFFTDIPDEMLRYERDSKVPLTVRDAVLILKGPDKGRTAIVVGVIKSRNQAVVRMDGTLTREMRILELSDIARQLPDDP 377          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A7S2RHK3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHK3_9STRA)

HSP 1 Score: 171 bits (434), Expect = 3.200e-48
Identity = 91/208 (43.75%), Postives = 136/208 (65.38%), Query Frame = 0
Query:   15 KIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVYDTTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHNK---------EVKLLSLGDIAKQL-DTPPPAPAKS 212
            +I+ L  YLEE+E  I ++ W  L  ++GVF +QE  F ++ID L  +++ AD+ ++ AM+YEA+ +FL LD +  A+R++  + AEKS+V+LA+AYDRFLKA  L   YD  T T   Y SIP+  LVYD   PP ++D++LI+ GPDKGRTG+LIGV  +  + +VR+++ K         EVK++ L ++AK + D P  A  KS
Sbjct:  169 RIKVLYAYLEEMERDIFARKWDTLSSYIGVFEKQELAFENIIDSLRTSQAAADRDAKRAMEYEARQMFLTLDAMAEATRFRDIRQAEKSYVQLAIAYDRFLKAADLYDVYDD-TDTSKLYESIPEDLLVYDREDPPRVQDDVLIIAGPDKGRTGKLIGVSDASSKGVVRVEYRKRTASKDASFEVKVVDLQNVAKTIPDKPQDAQLKS 375          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A7S2UZ25_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ25_9STRA)

HSP 1 Score: 157 bits (396), Expect = 9.940e-43
Identity = 92/213 (43.19%), Postives = 132/213 (61.97%), Query Frame = 0
Query:    4 VRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPI---TSTEPFYSSIPDSALVYD-----------TTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHNKEVKLLSLGDIAKQL 202
            V  + L  A  KIQAL PY++EVE  I  + W  + GFLGVFSEQE+ FV+LIDGL+P+ SP D  SRE+MQYEAQ +FLALD+L  A++ K+ + +  ++ KLA +Y RFL+A  LV   D     TST     ++ DS +  +           T + PE +D +L++ GPDKGR G+L+  I+   +A+V++D  KEV  + L  + KQ+
Sbjct:  176 VGKSDLAEAKIKIQALQPYVDEVENYIYEERWPLMGGFLGVFSEQEDQFVNLIDGLFPSNSPLDTISRESMQYEAQRMFLALDELREAAKLKQVRISRDAYSKLAKSYFRFLEAAALVPKVDLAQLATST-----NLNDSEMEMEAEEKYEERKQSTLERPEPRDEVLLVSGPDKGRLGKLVA-IEINGKAVVKLDITKEVIEVPLESVVKQV 382          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A7R9U506_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U506_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.040e-41
Identity = 75/168 (44.64%), Postives = 117/168 (69.64%), Query Frame = 0
Query:    7 NQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVYDTTKPPELKDNILILKGPDKGRTGRLIGVI 174
            +++ TA  KI AL PY++E+E  I + ++  L+ FL VFS+QE++FV  IDG+    +    ++ EAM++EA+ +FLALD++  A+  ++    +K ++KLALAYDR+LKA   +  YD I STE ++++IPD  LV+DT K PE +D ++ ++GPDKGRTG L+G I
Sbjct:  112 SEIATARRKIAALKPYMDEIERYIFTNDYEPLRAFLNVFSQQEDSFVKTIDGVASRGTADAIAAAEAMEHEAKQLFLALDEIRKAATLEKPSGLKKGYIKLALAYDRYLKASDNLPGYDKIVSTEKYFANIPDEWLVFDTEKKPEPQDPVIFIEGPDKGRTGVLLGYI 279          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A6U4CV34_9STRA (Hypothetical protein n=10 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CV34_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.060e-37
Identity = 80/179 (44.69%), Postives = 116/179 (64.80%), Query Frame = 0
Query:    6 DNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGL-YPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAG-GLVQTYDPITSTEPFYSSIPDSALVYDTTKPPELKDNILILKGPDKGRTGRLIGVIKSRQEAIV 182
            ++++  A  KI AL PYL+E++  I ++++  L+ FL VFS QEE F+  I+ +   +  PA   + EAM++EA+ +FLALDD+  A+  ++  A +K ++KLALAYDR+LKA   L   YD + STE F++ +PD  LVYDT   P   D +L + GPDKGRTG L+G  KSR  A V
Sbjct:  116 NSEVRKAREKIAALKPYLDEIQRYIYTEDYAPLRAFLNVFSAQEEAFLTTIESVGSASRGPAASVTAEAMEHEAKEIFLALDDIRKAATLQKPVALKKGYIKLALAYDRYLKASDNLPLGYDNVVSTEKFFADVPDEWLVYDTETLPVSLDPVLFIAGPDKGRTGILLGY-KSRPIADV 293          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A7S3Y3I2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3I2_HETAK)

HSP 1 Score: 129 bits (323), Expect = 1.130e-32
Identity = 71/218 (32.57%), Postives = 127/218 (58.26%), Query Frame = 0
Query:    3 PVRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVY--DTTKPPELKDNILILKGPDKGRTGRLIGVIKS-------RQEAIVRMDHN-------KEVKLLSLGDIAKQLDT 204
            P ++  L+    +++ +   L+E++  I +++W ++  +   F      F    D  +  E  AD+ SR A++YE   +F A++ L  A+  K  + A+ +F ++++AYDR+LKAG L   YDP+TSTE F++ +PDSAL +      PP++KD +L+  GPDKG+TG LIG+ ++       ++  IV++D+        +E+K++    +AK+LDT
Sbjct:   78 PAKEAALKGYGDRLRRIARTLDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRLDT 295          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: D7FKJ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ3_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 5.090e-32
Identity = 68/199 (34.17%), Postives = 120/199 (60.30%), Query Frame = 0
Query:   15 KIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVY--DTTKPPELKDNILILKGPDKGRTGRLIGV---IKSRQEAIVRMDHN-----KEVKLLSLGDIAKQLD 203
            K++     L+E++  I++ +W  +  +   F      F    D  +PT+ P D +SR A++YE    + A++ L  A+  + ++ A+ +F  +++AYDR+LKAG L   YD +TSTE FY+ + +S+L Y   +  PP++KDN+L++ GPDKG+TG +IGV     S  +AIV+++ +     +E+K++ L  +AK +D
Sbjct:  133 KLRRAAKMLDELQDDISNSDWDLVTTYPNAFRTLVPVFTKYTDAAFPTDDPVDTTSRVALRYEVGRFYGAVERLKRAAEQQNSREAQSAFAAMSVAYDRYLKAGNLYDGYDSVTSTEGFYADVSNSSLKYVPPSKDPPKIKDNVLLVAGPDKGKTGFMIGVEGGSLSATKAIVKLETSSALGMREIKVVPLDYVAKTVD 331          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A7S3Y3T3_HETAK (Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3T3_HETAK)

HSP 1 Score: 127 bits (319), Expect = 2.980e-30
Identity = 69/198 (34.85%), Postives = 118/198 (59.60%), Query Frame = 0
Query:   23 LEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVY--DTTKPPELKDNILILKGPDKGRTGRLIGVIKS-------RQEAIVRMDHN-------KEVKLLSLGDIAKQLDT 204
            L+E++  I +++W ++  +   F      F    D  +  E  AD+ SR A++YE   +F A++ L  A+  K  + A+ +F ++++AYDR+LKAG L   YDP+TSTE F++ +PDSAL +      PP++KD +L+  GPDKG+TG LIG+ ++       ++  IV++D+        +E+K++    +AK+LDT
Sbjct:  607 LDELQRDIFNEDWEFVATYPATFRAFVPVFTRYTDARFEGEGEADRQSRVALRYEVGRLFGAVERLKRAAEKKDPREAQAAFAQISVAYDRYLKAGYLYDAYDPVTSTEKFFADVPDSALRFAPPAADPPKIKDLVLLTAGPDKGKTGTLIGLEETLGSKGEKKKSGIVKLDNTIGRVSKIREIKVVPYAIVAKRLDT 804          
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Match: A0A0G4GSY0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GSY0_VITBC)

HSP 1 Score: 119 bits (297), Expect = 1.560e-28
Identity = 64/198 (32.32%), Postives = 115/198 (58.08%), Query Frame = 0
Query:   15 KIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEENFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAAEKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVY--DTTKPPELKDNILILKGPDKGRTGRLIGV-----IKSRQEAIVRMDHN----KEVKLLSLGDIAKQ 201
            +I+ +   L+E++  I  ++W  L  +          F    D  +P + P D+++R A++YE   +F +++ L  A   K  +  E++F  +++++DR+LKAG L + YDPI STE F+  + DS LVY      PP+++D +L+L+GPDKG+TG L+GV      K +++ +V++D      +E+K++    IAK+
Sbjct:  111 RIRQIATVLDELQADIYDEDWDILASYPQQLRAYVPIFTKYTDSAFPGKDPVDENTRFALRYEVGRLFGSVERLKRAVDKKDVRETEEAFAAMSVSFDRYLKAGDLYEVYDPIISTEKFFEGVEDSQLVYVPPLRDPPKIRDQVLLLRGPDKGKTGILLGVEGDEVAKVKRKGVVKLDTKVGSIRELKVVPYAFIAKR 308          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350886 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8F8_9STRA2.180e-147100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KTH9_9PHAE1.010e-7558.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2RHK3_9STRA3.200e-4843.75Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2UZ25_9STRA9.940e-4343.19Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9U506_9STRA1.040e-4144.64Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U4CV34_9STRA2.060e-3744.69Hypothetical protein n=10 Tax=Phaeomonas parva Tax... [more]
A0A7S3Y3I2_HETAK1.130e-3232.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D7FKJ3_ECTSI5.090e-3234.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3Y3T3_HETAK2.980e-3034.85Glutamyl-tRNA(Gln) amidotransferase subunit B, mit... [more]
A0A0G4GSY0_VITBC1.560e-2832.32Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023222PsbQ-like domain superfamilyGENE3D1.20.120.290coord: 3..117
e-value: 1.3E-7
score: 33.5
IPR023222PsbQ-like domain superfamilySUPERFAMILY101112Oxygen-evolving enhancer protein 3,coord: 5..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_75contigContig_75:91757..94782 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350886mRNA_7590Tribonema minus UTEX_B_3156 mRNAContig_75 91498..94789 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350886|estExt_Genemark1.C_Ctg_750012 ID=Trimin1|350886|estExt_Genemark1.C_Ctg_750012|Name=jgi.p|Trimin1|350886|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=213bp
MVPVRDNQLETAVAKIQALNPYLEEVEYLITSKNWGYLQGFLGVFSEQEE
NFVDLIDGLYPTESPADKSSREAMQYEAQNVFLALDDLNTASRYKRAKAA
EKSFVKLALAYDRFLKAGGLVQTYDPITSTEPFYSSIPDSALVYDTTKPP
ELKDNILILKGPDKGRTGRLIGVIKSRQEAIVRMDHNKEVKLLSLGDIAK
QLDTPPPAPAKS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023222PsbQ-like_dom_sf