mRNA_7504 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163138
Unique NamemRNA_7504
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|163138 vs. uniprot
Match: A0A836CGQ9_9STRA (NOT2_3_5 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGQ9_9STRA)

HSP 1 Score: 390 bits (1001), Expect = 5.390e-137
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1 
Query:    1 MRQQRIAAAAADTTVSLCVTVICSLTGLLRVIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQAYAAQELYLRDWRFHADLKLWLKRATAADSAAQVRFIFFDHNVWERRGFSGPLPMSVAVGGGLTGGLMSEEDVRVKLPVA 597
            MRQQRIAAAAADTTVSLCVTVICSLTGLLRVIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQAYAAQELYLRDWRFHADLKLWLKRATAADSAAQVRFIFFDHNVWERRGFSGPLPMSVAVGGGLTGGLMSEEDVRVKLPVA
Sbjct:    1 MRQQRIAAAAADTTVSLCVTVICSLTGLLRVIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQAYAAQELYLRDWRFHADLKLWLKRATAADSAAQVRFIFFDHNVWERRGFSGPLPMSVAVGGGLTGGLMSEEDVRVKLPVA 199
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BLAST of jgi.p|Trimin1|163138 vs. uniprot
Match: A0A7S0C8Q4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C8Q4_9STRA)

HSP 1 Score: 220 bits (561), Expect = 2.330e-68
Identity = 112/175 (64.00%), Postives = 133/175 (76.00%), Query Frame = 1 
Query:   73 LTGLLRVIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQAYAAQELYLRDWRFHADLKLWLKRATAAD--SAAQVRFIFFDHNVWERRGFSGPLPMSVAVGGGLTGGLMSEEDVRVKLP 591
            L GLL VIRM+D D N LALGSDLT LGLNL+SSE LY+TFA PW++ P++ EPQ+QLP CYYMQPP+LKT H SKF LETLFYIFYA+P D+LQAYAAQELY RDWR+H DLKLW KRA+  D  +A   ++I+FD N WERR F+G +  +         G +SEEDVRVK P
Sbjct:  150 LLGLLGVIRMSDADRNALALGSDLTLLGLNLNSSEHLYSTFASPWSDSPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQAYAAQELYSRDWRYHVDLKLWFKRASPVDVPNANGTQYIYFDINSWERRIFNGSMHQN------FPNGFLSEEDVRVKFP 318
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BLAST of jgi.p|Trimin1|163138 vs. uniprot
Match: A0A7R9W176_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W176_9STRA)

HSP 1 Score: 223 bits (569), Expect = 3.000e-68
Identity = 111/178 (62.36%), Postives = 135/178 (75.84%), Query Frame = 1 
Query:   73 LTGLLRVIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQAYAAQELYLRDWRFHADLKLWLKRATAADSAAQ-----VRFIFFDHNVWERRGFSGPLPMSVAVGGGLTGGLMSEEDVRVKLP 591
            L GLL +IRMTD D N LALGSDLT LG+NL+SS+ LY+TFA PW+E P++ EPQ+QLP CYYMQPP+LKT H SKF LETLFYIFYA+P D+LQAYAAQELY R+WR+H DLKLW KR  A+D  A      +++I+FD N WERR F+G +         +TGG +SE+DVRVK P
Sbjct:  257 LLGLLSIIRMTDADRNALALGSDLTALGMNLNSSDKLYSTFASPWSESPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQAYAAQELYSREWRYHVDLKLWFKRGGASDGLAATANGGIQYIYFDVNTWERRLFNGNVQS-------VTGGFLSEDDVRVKFP 427
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BLAST of jgi.p|Trimin1|163138 vs. uniprot
Match: A0A7S2XLH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLH6_9STRA)

HSP 1 Score: 224 bits (571), Expect = 5.820e-68
Identity = 115/176 (65.34%), Postives = 135/176 (76.70%), Query Frame = 1 
Query:   73 LTGLLRVIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQAYAAQELYLRDWRFHADLKLWLKRATAADSA-----AQVRFIFFDHNVWERRGFSGPLPMSVAVGGGLTGGLMSEEDVRVK 585
            L GLL VIRM+D D N LALGSDLT+LGLNL+SS+ LY+TFAGPW+E P++ EPQ+QLP CYYMQPP+LKT H SKF LETLFYIFYA+P D+LQAYAAQELY R+WR+H DLKLW KRA   D       A  +F+FFD N WERR F+G +  ++      T GLMSEEDVRVK
Sbjct:  313 LLGLLGVIRMSDADRNALALGSDLTSLGLNLNSSDQLYSTFAGPWSENPTTREPQYQLPMCYYMQPPALKTGHLSKFALETLFYIFYALPKDVLQAYAAQELYSREWRYHVDLKLWFKRAGPNDGVGNNGGAGNQFLFFDINTWERRIFNGNMNQNI------TSGLMSEEDVRVK 482
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BLAST of jgi.p|Trimin1|163138 vs. uniprot
Match: A0A7S2EBZ5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBZ5_TRICV)

HSP 1 Score: 222 bits (566), Expect = 9.860e-68
Identity = 112/178 (62.92%), Postives = 134/178 (75.28%), Query Frame = 1 
Query:   73 LTGLLRVIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQAYAAQELYLRDWRFHADLKLWLKRATAADSAAQV-----RFIFFDHNVWERRGFSGPLPMSVAVGGGLTGGLMSEEDVRVKLP 591
            L GLL VIRMTD D N LALGSDLT LG+NL+SS+ LY+TFA PW+E P++ EPQ+QLP CYYMQPP+LKT H SKF LETLFYIFYA+P D+LQAYAAQELY R+WR+H DLKLW KRA  +D          ++I+FD N WERR F+G +         +TGGL+SE+DVRVK P
Sbjct:  263 LLGLLSVIRMTDADRNALALGSDLTALGMNLNSSDKLYSTFASPWSESPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPRDVLQAYAAQELYSREWRYHVDLKLWFKRAGPSDGLTATANGGNQYIYFDVNTWERRLFNGNVQT-------ITGGLLSEDDVRVKFP 433
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BLAST of jgi.p|Trimin1|163138 vs. uniprot
Match: A0A6U3ZWB8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZWB8_9STRA)

HSP 1 Score: 217 bits (552), Expect = 3.600e-65
Identity = 108/172 (62.79%), Postives = 131/172 (76.16%), Query Frame = 1 
Query:   91 VIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQAYAAQELYLRDWRFHADLKLWLKRATAADSAAQ-----VRFIFFDHNVWERRGFSGPLPMSVAVGGGLTGGLMSEEDVRVKLP 591
            VIRM+D D N LALGSDLT LGLNL SS+ LY+TFA PW+E P++ EPQ+QLP CYYMQPP+LKT H SKF LETLFYIFYA+P D+LQAYAAQELY R+WR+H +LKLW KRA  AD  A      V++I+FD N WERR F+G +  ++      T GL+SE+DVRV+ P
Sbjct:  312 VIRMSDADRNALALGSDLTALGLNLSSSDQLYSTFASPWSESPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQAYAAQELYSREWRYHVELKLWFKRAGPADGVANNAGSGVQYIYFDINSWERRLFNGNMNQNI------TSGLLSEDDVRVQFP 477
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BLAST of jgi.p|Trimin1|163138 vs. uniprot
Match: A0A7S2PH42_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PH42_9STRA)

HSP 1 Score: 207 bits (527), Expect = 4.810e-64
Identity = 105/177 (59.32%), Postives = 130/177 (73.45%), Query Frame = 1 
Query:   73 LTGLLRVIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQAYAAQELYLRDWRFHADLKLWLKRATAAD----SAAQVRFIFFDHNVWERRGFSGPLPMSVAVGGGLTGGLMSEEDVRVKLP 591
            L GLL VIRMTD D N LALGSDLT LGLNL+S++ LY+TF GP+++ P++ EP +QLP CYYMQPP+LKT H SKF LETLFYIFYA+P D+LQAYAAQELY RDWR+H + K+W K+AT +D    + A  ++I+FD N WERR +         V   + GG + EEDVRVK P
Sbjct:   86 LLGLLSVIRMTDADRNRLALGSDLTVLGLNLNSNDNLYSTFGGPFSDKPATREPHYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQAYAAQELYTRDWRYHVESKVWFKQATPSDVPNGNVAAGQYIYFDINTWERRLYGN-------VNQNIAGGFLPEEDVRVKFP 255
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BLAST of jgi.p|Trimin1|163138 vs. uniprot
Match: A0A7S2SSK7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSK7_9STRA)

HSP 1 Score: 210 bits (534), Expect = 6.340e-63
Identity = 110/181 (60.77%), Postives = 129/181 (71.27%), Query Frame = 1 
Query:   73 LTGLLRVIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQP-PSLKTTHFSKFTLETLFYIFYAMPSDILQAYAAQELYLRDWRFHADLKLWLKRATAAD-----SAAQVRFIFFDHNVWERRGFSGPLPMSVAVGGGLTGGLMSEEDVRVKLPVA 597
            L GLL+VIRMTDPDLN LALGSDLTTLGLNL+SS+ LY+TF+ PWA+GPS  EPQFQ+P CYYMQ  P LK  H  KF LETLFYIFYAMP D+LQ YAA+ELY RDW++H DLKLW +RAT  D     + A  +F++FD N WE R FSG +       G    G M EE+V   +P A
Sbjct:  257 LLGLLKVIRMTDPDLNTLALGSDLTTLGLNLNSSKSLYSTFSSPWADGPSKSEPQFQIPACYYMQQTPPLKHAHLQKFQLETLFYIFYAMPKDLLQVYAARELYQRDWKYHGDLKLWFRRATQHDIPHLLANAPPQFVYFDLNTWECRLFSGNIH------GAFANGFMKEEEVVAAIPQA 431
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BLAST of jgi.p|Trimin1|163138 vs. uniprot
Match: B7FQW3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQW3_PHATC)

HSP 1 Score: 206 bits (524), Expect = 3.740e-61
Identity = 102/178 (57.30%), Postives = 133/178 (74.72%), Query Frame = 1 
Query:   73 LTGLLRVIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQAYAAQELYLRDWRFHADLKLWLKRATAAD-----SAAQVRFIFFDHNVWERRGFSGPLPMSVAVGGGLTGGLMSEEDVRVKLP 591
            L GLL VIRMTD D N LALGSDLT LGLNL S+E +Y+TF+ PW++  ++ EP +QLP CYYMQPP+LKT H SKF LETLFYIFYA+P D+LQAYAAQELY R+WR+H +LKLW KRA+ +D     S+   ++++FD N WERR F+G +  ++      T G ++E++V+VK P
Sbjct:  291 LLGLLGVIRMTDDDRNTLALGSDLTMLGLNLGSTEQIYSTFSSPWSDNVATKEPHYQLPVCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQAYAAQELYSREWRYHGELKLWFKRASPSDGVSSSSSGSPQYLYFDINSWERRLFNGSMNQNI------TSGFITEDEVQVKFP 462
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BLAST of jgi.p|Trimin1|163138 vs. uniprot
Match: A0A7S2IE73_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IE73_9EUKA)

HSP 1 Score: 197 bits (501), Expect = 5.610e-61
Identity = 100/147 (68.03%), Postives = 117/147 (79.59%), Query Frame = 1 
Query:   73 LTGLLRVIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQAYAAQELYLRDWRFHADLKLWLKRAT---AADSAAQVRFIFFDHNVWERRGF 504
            L GLL VIRMTD DLN LALG+DLTTLGLNL+SSE LYATFA PWA+ P+  +P+F LPQCYYMQPP+LKT HFSKF LETLFYIFY MP D LQAYAA ELY RDWR+H DLKLW  +A    AAD+  + ++I+FD N W+++ F
Sbjct:   22 LMGLLSVIRMTDQDLNTLALGTDLTTLGLNLNSSECLYATFASPWADSPAQRDPEFSLPQCYYMQPPALKTGHFSKFQLETLFYIFYNMPRDTLQAYAATELYNRDWRYHKDLKLWFTKAARQGAADTQ-KGQYIYFDINEWKKKIF 167
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163138 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CGQ9_9STRA5.390e-137100.00NOT2_3_5 domain-containing protein n=1 Tax=Tribone... [more]
A0A7S0C8Q4_9STRA2.330e-6864.00Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7R9W176_9STRA3.000e-6862.36Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2XLH6_9STRA5.820e-6865.34Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S2EBZ5_TRICV9.860e-6862.92Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6U3ZWB8_9STRA3.600e-6562.79Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2PH42_9STRA4.810e-6459.32Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2SSK7_9STRA6.340e-6360.77Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B7FQW3_PHATC3.740e-6157.30Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2IE73_9EUKA5.610e-6168.03Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_24contigContig_24:410226..413699 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163138|e_gw1.24.16.1
BRITEko00000,ko00001,ko03019
KEGG Pathwayko03018,map03018
KEGG koko:K12605
DescriptionNOT2 / NOT3 / NOT5 family
COG categoryDK
Max annot lvl2836|Bacillariophyta
EggNOG OGsCOG5601@1|root,KOG2151@2759|Eukaryota,2XH2V@2836|Bacillariophyta
Evalue6.14e-62
Seed ortholog2850.Phatr43176
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNOT2/NOT3/NOT5
Ec32 orthologEc-10_000990.1
TranscriptId163460
TrackFilteredModels1
ProteinId163138
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163138gene_7504Tribonema minus UTEX_B_3156 geneContig_24 410226..413699 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163138Trimin1|163138|e_gw1.24.16.1Tribonema minus UTEX_B_3156 polypeptideContig_24 410226..413699 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_7504_4exon_7504_4Tribonema minus UTEX_B_3156 exonContig_24 410226..410363 -
exon_7504_3exon_7504_3Tribonema minus UTEX_B_3156 exonContig_24 411221..411325 -
exon_7504_2exon_7504_2Tribonema minus UTEX_B_3156 exonContig_24 412430..412609 -
exon_7504_1exon_7504_1Tribonema minus UTEX_B_3156 exonContig_24 413523..413699 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_7504CDS_7504Tribonema minus UTEX_B_3156 CDSContig_24 413523..413699 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_7504 ID=mRNA_7504|Name=jgi.p|Trimin1|163138|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=600bp|location=Sequence derived from alignment at Contig_24:410226..413699- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCCAACAGCGCATCGCAGCGGCGGCCGCTGACACGACAGTTTCTCT
GTGCGTAACTGTCATCTGCAGCTTGACGGGCCTGCTGCGCGTCATTCGGA
TGACGGATCCTGATCTCAACATGCTCGCGCTCGGCAGCGACCTCACAACG
CTCGGCCTGAACCTCGACTCTTCAGAGGTGCTGTACGCCACGTTTGCGGG
ACCATGGGCGGAAGGACCCTCTTCAGGCGAGCCGCAGTTCCAGCTGCCGC
AGTGCTACTACATGCAGCCGCCGTCTCTCAAGACGACGCACTTCAGCAAG
TTCACGCTGGAGACCCTCTTCTACATCTTCTACGCCATGCCGTCCGACAT
ACTGCAGGCGTACGCGGCGCAGGAGCTGTACCTGCGCGACTGGCGCTTCC
ACGCGGACCTCAAGCTGTGGCTGAAGCGCGCCACCGCTGCCGACTCTGCA
GCACAGGTACGTTTCATCTTCTTCGACCACAACGTGTGGGAGCGCAGGGG
GTTCTCGGGCCCCCTGCCCATGAGCGTCGCGGTGGGGGGGGGGCTCACGG
GGGGCCTCATGTCGGAGGAAGACGTACGGGTCAAGCTGCCCGTCGCCTGA
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protein sequence of jgi.p|Trimin1|163138

>Trimin1|163138|e_gw1.24.16.1 ID=Trimin1|163138|e_gw1.24.16.1|Name=jgi.p|Trimin1|163138|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=200bp
MRQQRIAAAAADTTVSLCVTVICSLTGLLRVIRMTDPDLNMLALGSDLTT
LGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSK
FTLETLFYIFYAMPSDILQAYAAQELYLRDWRFHADLKLWLKRATAADSA
AQVRFIFFDHNVWERRGFSGPLPMSVAVGGGLTGGLMSEEDVRVKLPVA*
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mRNA from alignment at Contig_24:410226..413699-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7504 ID=mRNA_7504|Name=jgi.p|Trimin1|163138|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3474bp|location=Sequence derived from alignment at Contig_24:410226..413699- (Tribonema minus UTEX_B_3156 )
ATGCGCCAACAGCGCATCGCAGCGGCGGCCGCTGACACGACAGTTTCTCT
GTGCGTAACTGTCATCTGCAGCTTGACGGGCCTGCTGCGCGTCATTCGGA
TGACGGATCCTGATCTCAACATGCTCGCGCTCGGCAGCGACCTCACAACG
CTCGGCCTGAACCTCGACTCTTCAGAGGTGAGTCTGGGTTCCAATCAACA
CAATAATTCCACAGCACACTTGGTGTTCTAACTTGAAGTGTCAACATGTA
GTCTAACTTGAAGTATCAACCCCAACATGCTCGCGCTTGGCAGCGACCTC
AAAGAACGCTTGGCCTGAACCTCGACTCCTCCGAGCTGAGTCTGAGTCAA
AGTCCAGATTGTTGCCTCAAATGCATGGCAAATGAGTGACTTGTTGACTT
TGACCTGAGAGTCGCGGGATGACCACGCTCGGCCTGAACCTCGACTCCTT
AGAGGCAAGTCCGAGTAGCAATCAACGTGGCAGCGATCGCATATCACTCT
TGGTGACTTGTTGACTTGATTATAGATTAGAATCTGAGTTGAAGTCTAGA
CCTCGGCATGATCGCGCTGGGCAGCCGCGGCCTCACTCATTCTTGACTCT
TCAGAGGTGAGTCTGAGATTGAGTGTCATGATCATTCACATGGCACCAAC
CTTACAGTGTGTGAGTGTGTGTGGTCTCGAACTGACTCTTTAGCAGTGGC
GCTGATCGAATGCCAGTTGCAGCTCCCACAGTGCTACTACATGCGCTTTA
ATTCACCTGAATCCTGCAGACGTCAACTGCAGGTGCCGAGCGCCCAGTAC
TAAATAGAGACACCCTGCTCCACAACTTGAACTGCAATTCCGAAACCGCC
AACTGCAGGTGCTGTGCGCCACGTTCGCGGGGCCATGGGCGGAGGGACCC
TCTTCTGGCGAGTTGCAGTTCCAGCTCCCGCAGTGCTACACATGCATACT
ACCTTCAACTGCATCATTAACTTCAAACTGAGTCATGAAGCCGCCAACTG
CAGGTGCTGAGCGCCTAGGTTTTGAGACACATGAATGACACACACACCCT
CCTCCCAACTTCGACTGCAACTCTGAAACGCCAACTGCAGGTGCTGTACG
CCACGTTTGCGGGACCATGGGCGGAAGGACCCTCTTCAGGCGAGCCGCAG
TTCCAGCTGCCGCAGTGCTACTACATGCAGCCGCCGTCTCTCAAGACGAC
GCACTTCAGCAAGTTCACGCTGGAGACCCTCTTCTACATCTTCTACGCCA
TGCCGTCCGACATACTGCAGGTATGTATGTATTGGCAGGAGTGTATGGTT
TATTGGCTATTAAGTAACTTCACAATTCCATACAGTGCTCAGCAAGTTCT
CGTTGGAGACCCTCCTTCTACATGTTCAACGCCATGCCGTCCGACATACT
GCAGGTACGCACATGTTGGCAAGCACGCACGTTTTATTTCCTATCTTAGA
AGGAGATTTGTGCTTCCAGAAAGTTCCTATTAGGGAGCTTCATGCTTCCA
TAAGGTGCTAGAAAAACTCACGCTGGAGACCCTCTTCTACATCTTCTACG
CCATGCCGTCCGACATACTGCAGGTATGTACGCATTGGCACGTATGTTCT
GTTTGCTAGTAAGGAGCTTCATGATTCCATACAGTGCTCAGCACGTTCAC
GCTGGAGACGCTCTTCTACATCTTCTACGCCATGCCGTCCGACATACTGC
AGGTACGTACGTACATGTTGGTATGCGCGCACATTTTATTTCCTATATCA
AGGAGATTTGTGCTTCCAGAAAGTTCCTATTTCAATGTTAAAAGGAACTT
TATGATTCCATACAGTGCTCACCAAGTTCACGCTGGAGGCCCTCTACATC
TTCTACGCCATGCCGTCCGACATACTGCAGGTATGTGCATTTTGTTTGTT
GTTTTAGAAGGAATTTTCATGATTCCATACAGTGCTCAGCAAGTTCACGC
TGGAGACGCCCTTCTACGTTTTCTACGCGATGCCGTCCGACATACTGCAG
GTACGTACGCATTGGCAGGAATGCACGTTTTTGTTCCTATTAAGGACATT
TATGATTCGCAGGAGCTGTAGTGCGCCTAACCCTAACCGTTAGCATGCGC
TGACCCATGCACACGCGCTCGTAACAAGAAAAATAGTGTTCTGCCACGTG
TCTTCTTTTAAACCCCCATGTAACTATTAGCGCACTCCTTCCTCACGAAT
CCAGCTGCCAGTTTGCACCACATGCTCAACTTCAACTTCAAATCTGAGTT
TCTTGCAGGACCTGTCCTGCGCGATGTACTTGGCGCACTCGTTGCGCATG
AAAATGGAACCGGCTGCGCGGTTGCACCACAAGTCAACTTCAACTTGAAT
TTCAAATGCGGCTTTGTCTTGCAGGCGTACGCGGCGCAGGAGCTGTACCT
GCGCGACTGGCGCTTCCACGCGGACCTCAAGCTGTGGCTGAAGCGCGCCA
CCGCTGCCGACTCTGCAGCACAGGTACGTGTGAACTTACAGTACTTGGCC
ATTTGCTGTACTCCAACTACTGTACCTCAGAGTATGTAGAGGGTAAGGGG
TTAGGGCTAGGGTTAGGGTTAGGGTTGGGCGGCTGGCGCTTCCAGGCAGA
CCTCAACGCTGTGGCTGAAGCGCGCCACCGCTGCCGACTCCGCAGCTTAG
GTACGTGTGTCGAAGTATGTAATTCTATTGTCAAGGGGCAACTGCAAGCC
TCTACAACCACCACGTCTTACATGGCCTTGACCCAGCATGCCGCATGTGC
GTTCTGCAGCGGCAGCACACTCAGTGTTGAGGCGTCCCACTTTAGGGTTA
GATTTGGTGTTTAGGTTAGGGTAACCCCCGTAAACTGATCGCTGATGCAC
TGCACACCGCGTCACACCGCTGCGTGCAGCCCAACGTCCAGCTCATCTTC
TTCAACCACCAGCGGCACATACAAAACTCATGATTGCCACGCCTTACGTA
GCCCCAGACTAGCACGCCACATGCGTGCCCTGCGCTGACTGCGCACTCAT
TGTCAAGACGCATTTTACTGCTGAGCACTGACGCGCTGCACGCCCTATCG
AATGTGCAAGGCCAGCCTGAAGAGAGCTGGCTACTGCCTGCACCTCACTG
TTCTGATAGTGCCAGCATGCTAGCACTCATACAAAAGGCCATCAGAGGAC
GAGAAGTTGGAAAAAGTGGAAAGCTGGAGGCCGCTTGACCTGACCGACCG
GCTTCGCCGGCTTGCTGGCTTAGCCGAAGTGGGTCGGCTGAGCCGGTTTT
GGCTCAGAACACGACATGAAAGCTGAGCGCTGATGCACTGCACGCACACC
ACCTTTACTTCTTTGCGCGCGCAGCCCGGCGTCCAGTTCATCTTCTTCGA
CCACAACGTGTGGGAGCGCAGGGGGTTCTCGGGCCCCCTGCCCATGAGCG
TCGCGGTGGGGGGGGGGCTCACGGGGGGCCTCATGTCGGAGGAAGACGTA
CGGGTCAAGCTGCCCGTCGCCTGA
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Coding sequence (CDS) from alignment at Contig_24:410226..413699-

>mRNA_7504 ID=mRNA_7504|Name=jgi.p|Trimin1|163138|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=600bp|location=Sequence derived from alignment at Contig_24:410226..413699- (Tribonema minus UTEX_B_3156 )
ATGCGCCAACAGCGCATCGCAGCGGCGGCCGCTGACACGACAGTTTCTCT
GTGCGTAACTGTCATCTGCAGCTTGACGGGCCTGCTGCGCGTCATTCGGA
TGACGGATCCTGATCTCAACATGCTCGCGCTCGGCAGCGACCTCACAACG
CTCGGCCTGAACCTCGACTCTTCAGAGGTGCTGTACGCCACGTTTGCGGG
ACCATGGGCGGAAGGACCCTCTTCAGGCGAGCCGCAGTTCCAGCTGCCGC
AGTGCTACTACATGCAGCCGCCGTCTCTCAAGACGACGCACTTCAGCAAG
TTCACGCTGGAGACCCTCTTCTACATCTTCTACGCCATGCCGTCCGACAT
ACTGCAGGCGTACGCGGCGCAGGAGCTGTACCTGCGCGACTGGCGCTTCC
ACGCGGACCTCAAGCTGTGGCTGAAGCGCGCCACCGCTGCCGACTCTGCA
GCACAGGTACGTTTCATCTTCTTCGACCACAACGTGTGGGAGCGCAGGGG
GTTCTCGGGCCCCCTGCCCATGAGCGTCGCGGTGGGGGGGGGGCTCACGG
GGGGCCTCATGTCGGAGGAAGACGTACGGGTCAAGCTGCCCGTCGCCTGA
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