mRNA_7167 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348235
Unique Name	mRNA_7167
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A835ZB47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB47_9STRA)

HSP 1 Score: 281 bits (720), Expect = 9.370e-95
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1

Query:   61 MAVHSVLSLLLVATACVSAFVVPSGGLARVSARSQAPSMLLGGVAAAAAASIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDEDVDYE 510
            MAVHSVLSLLLVATACVSAFVVPSGGLARVSARSQAPSMLLGGVAAAAAASIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDEDVDYE
Sbjct:    1 MAVHSVLSLLLVATACVSAFVVPSGGLARVSARSQAPSMLLGGVAAAAAASIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDEDVDYE 150

[Close]

BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A7S2CEE7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CEE7_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.770e-28
Identity = 69/141 (48.94%), Postives = 93/141 (65.96%), Query Frame = 1

Query:   76 VLSLLLVATACVSA-FVVPSGGLARVSARSQAPSMLLGGVAAAAAASIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDE 495
            +L+LL VA+A   A   +P     R       P  L+   A AAAA+++S+ P  T  L  + N P+      +K ET+EG YGEY V+VKEQ VD+A STFKS +AT+KGKNKY AVL +LLVGSF+IPM+QY+WY+R++
Sbjct:    4 LLTLLTVASAAAFAPKALPRASFNRAVTPRAVPVALVDVAAGAAAAAVLSSQPMDTSMLSNMANVPM--MVSATKYETKEGIYGEYQVEVKEQAVDDARSTFKSAKATKKGKNKYVAVLGVLLVGSFLIPMLQYFWYVRED 142

[Close]

BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: D8LTU5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTU5_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 8.710e-25
Identity = 68/149 (45.64%), Postives = 92/149 (61.74%), Query Frame = 1

Query:   85 LLLVATACVSAFVVPS----GG---LARVSARSQAPSMLL--GGVAAAAAASIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQ--EVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDED 498
            L+L    C  AFV P     GG     R +A +  P M+L     A AA A +I + P + ++L +  +QP +   +++  ETREG YG Y V+V+E+  E D   STFK KE TE+G++KY +VL +LL GSFVIPMVQYWWYIRD+D
Sbjct:   10 LVLGLVGCSQAFVTPPVTGLGGRVSAGRSAASASGPRMMLPMAPFAGAAVAHLIGSNPINPEHLVSAKSQPTH---LVAYKETREGLYGPYEVEVQERAPETDFGISTFKKKEETEEGRDKYTSVLAVLLAGSFVIPMVQYWWYIRDDD 155

[Close]

BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A7R9U6V2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6V2_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.950e-20
Identity = 41/69 (59.42%), Postives = 55/69 (79.71%), Query Frame = 1

Query:  292 SKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDED 498
            ++TE R+G Y EY+++ K Q+ DNA S FKSKE T  GKN+Y AVL +L+VGSF+IPM QYWWYI+D++
Sbjct:   65 AETEVRQGMYKEYTIEKKSQQYDNAASGFKSKEETASGKNRYVAVLGVLVVGSFIIPMAQYWWYIKDDE 133

[Close]

BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A7S2B691_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B691_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.020e-19
Identity = 56/120 (46.67%), Postives = 78/120 (65.00%), Query Frame = 1

Query:  154 ARSQAPSMLLGGVAAAAAASIISTAPASTDYLRTLHNQPVNSWTM------LSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDE 495
            ARS   + L    A  AAAS+++ + A+T        +PV++  M      ++  ETREG YG Y V++K Q+VD+A  TFKSK+ T KGK KY AVL +LL GSFVIPM+QY+WY+R++
Sbjct:   34 ARSTPVAKLDSRAAGLAAASLLAASVATTAV------EPVSAHAMYDAPMTVAVKETREGVYGTYEVEIKPQDVDDAAGTFKSKDDTVKGKKKYIAVLGVLLFGSFVIPMLQYFWYVRED 147

[Close]

BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A1Z5K6I3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6I3_FISSO)

HSP 1 Score: 90.9 bits (224), Expect = 1.430e-19
Identity = 40/71 (56.34%), Postives = 55/71 (77.46%), Query Frame = 1

Query:  286 MLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDED 498
            +L++   REG YGEY +D+ EQ+ D+A STFKS + T+  K KY A+L IL+VGSF+IPM QYWWY++D+D
Sbjct:   68 VLAEKVIREGVYGEYEIDLPEQKYDDARSTFKSAKETKTKKGKYTALLAILIVGSFIIPMAQYWWYVKDDD 138

[Close]

BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A7S3L8Q2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L8Q2_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.100e-18
Identity = 59/144 (40.97%), Postives = 86/144 (59.72%), Query Frame = 1

Query:   76 VLSLLLVATACVS---AFVVPSGGLARVSARSQAPSMLLGGVAAAAAASIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDED 498
            +LSLLLVA A V    + V P   L + ++ + A +++        A+S++S AP   D      +  V     +++   REG YGEY VDV +Q  D+A STFKS + T+  K KY A+L +L+VGSF+IPM QY+WY+RD+D
Sbjct:    7 LLSLLLVADAYVQKPKSSVKPLAHLQKTASGAAAAALI--------ASSVLSWAPPPADASFAFTSSQV-----VAEKVIREGVYGEYEVDVPDQVYDDARSTFKSAKETKTKKGKYTALLAVLIVGSFIIPMAQYFWYVRDDD 137

[Close]

BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A7S3V6F5_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6F5_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.340e-18
Identity = 46/102 (45.10%), Postives = 69/102 (67.65%), Query Frame = 1

Query:  190 VAAAAAASIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDE 495
            VAA  AA++I+   A  +    + N   +S  +++ TETR G Y +Y +D+  Q VDNA+S+FKS + T+  K KY A+L IL+VGSF+IPM QY+WY++D+
Sbjct:   40 VAATIAANVINPDVAIANDFAMMPNVFQSSNIVVAATETRSGVYKDYDIDLTPQTVDNAESSFKSAKETKSKKGKYTAILAILIVGSFIIPMAQYFWYVKDD 141

[Close]

BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: W7T3I2_9STRA (Uncharacterized protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3I2_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.550e-18
Identity = 40/79 (50.63%), Postives = 57/79 (72.15%), Query Frame = 1

Query:  259 HNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDE 495
            HNQ   S T+  + E+R+G Y EY+V+   Q+ +NA+ TFK+K+ T   KNKY A+L +LLVGS VIPM QY+WY++D+
Sbjct:   82 HNQAFTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD 160

[Close]

BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A7R9WM32_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WM32_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 4.290e-18
Identity = 40/75 (53.33%), Postives = 58/75 (77.33%), Query Frame = 1

Query:  274 NSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDED 498
            +S  M+++  TR+G YG+Y VD+  Q VD+A+STFKS + T+  K KY A+L IL+VGSF++PM QY+WY+RD+D
Sbjct:   67 SSTNMVAEKVTRQGMYGDYEVDLT-QTVDDAESTFKSAKETKTKKGKYTAILAILIVGSFIVPMAQYFWYVRDDD 140

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348235 vs. uniprot

BLAST of jgi.p|Trimin1|348235 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZB47_9STRA	9.370e-95	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2CEE7_9STRA	2.770e-28	48.94	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
D8LTU5_ECTSI	8.710e-25	45.64	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7R9U6V2_9STRA	1.950e-20	59.42	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A7S2B691_9STRA	1.020e-19	46.67	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A1Z5K6I3_FISSO	1.430e-19	56.34	Uncharacterized protein n=2 Tax=Fistulifera solari...	[more]
A0A7S3L8Q2_9STRA	1.100e-18	40.97	Hypothetical protein n=1 Tax=Amphora coffeiformis ...	[more]
A0A7S3V6F5_9STRA	1.340e-18	45.10	Hypothetical protein n=2 Tax=Chaetoceros debilis T...	[more]
W7T3I2_9STRA	1.550e-18	50.63	Uncharacterized protein n=4 Tax=Monodopsidaceae Ta...	[more]
A0A7R9WM32_9STRA	4.290e-18	53.33	Hypothetical protein n=1 Tax=Craspedostauros austr...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_21	contig	Contig_21:555304..559269 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348235\|estExt_Genemark1.C_Ctg_210057
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2CAH2@1\|root,2SAK7@2759\|Eukaryota
Evalue	9.29e-26
Seed ortholog	2880.D8LTU5
Hectar predicted targeting category	chloroplast
Ec32 ortholog description	conserved unknown protein
Ec32 ortholog	Ec-28_002720.1
TranscriptId	348557
Track	FilteredModels1
ProteinId	348235

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348235	gene_7167	Tribonema minus UTEX_B_3156	gene	Contig_21 555304..559269 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348235	Trimin1\|348235\|estExt_Genemark1.C_Ctg_210057	Tribonema minus UTEX_B_3156	polypeptide	Contig_21 555364..559155 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_7167_1	exon_7167_1	Tribonema minus UTEX_B_3156	exon	Contig_21 555304..555436 +
exon_7167_2	exon_7167_2	Tribonema minus UTEX_B_3156	exon	Contig_21 555570..555590 +
exon_7167_3	exon_7167_3	Tribonema minus UTEX_B_3156	exon	Contig_21 556642..556895 +
exon_7167_4	exon_7167_4	Tribonema minus UTEX_B_3156	exon	Contig_21 559051..559269 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_7167	UTR5_7167	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_21 555304..555363 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_7167	CDS_7167	Tribonema minus UTEX_B_3156	CDS	Contig_21 555364..555436 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_7167	UTR3_7167	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_21 559156..559269 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_21:555304..559269+
coding sequence from alignment at Contig_21:555304..559269+

spliced messenger RNA

>mRNA_7167 ID=mRNA_7167|Name=jgi.p|Trimin1|348235|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=627bp|location=Sequence derived from alignment at Contig_21:555304..559269+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CAGAGAGTTGCCTCTGCCTGCAAAGAGGGACGAGGAGTAATCGCAGCGCA
TTACAGCAATATGGCAGTACACTCTGTGCTCTCGCTGCTGCTCGTGGCCA
CAGCATGCGTGTCAGCGTTCGTGGTGCCGTCAGGGGGGCTGGCACGTGTG
TCAGCGCGCAGCCAAGCGCCTTCTATGCTGCTGGGCGGCGTCGCCGCCGC
CGCGGCCGCCTCCATCATCAGCACGGCGCCGGCGTCGACGGACTACCTGC
GCACCCTGCACAATCAGCCGGTGAACTCGTGGACGATGCTCAGCAAGACG
GAGACGCGCGAGGGGTTTTACGGGGAGTACTCGGTGGACGTGAAGGAGCA
GGAGGTGGACAATGCGGACTCGACGTTCAAGTCGAAGGAGGCCACGGAGA
AGGGCAAGAACAAGTACAACGCCGTGCTGCTGATACTGCTGGTGGGCTCC
TTTGTCATCCCAATGGTCCAATACTGGTGGTACATCCGCGACGAGGACGT
TGACTATGAGTAAACGAGTAACTCCGAGTCGTACTGCCCCTCAATAAAGA
GCACCTTTGACGAGCATCGAGAAGCCGCAGCTGCGCACACAGGAGCTGTG
CTAGCACCTGGGATGGGTGGGTTTGTG

protein sequence of jgi.p|Trimin1|348235

>Trimin1|348235|estExt_Genemark1.C_Ctg_210057 ID=Trimin1|348235|estExt_Genemark1.C_Ctg_210057|Name=jgi.p|Trimin1|348235|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=151bp
MAVHSVLSLLLVATACVSAFVVPSGGLARVSARSQAPSMLLGGVAAAAAA
SIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVD
NADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDEDVDYE
*

mRNA from alignment at Contig_21:555304..559269+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_7167 ID=mRNA_7167|Name=jgi.p|Trimin1|348235|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3966bp|location=Sequence derived from alignment at Contig_21:555304..559269+ (Tribonema minus UTEX_B_3156 )
CAGAGAGTTGCCTCTGCCTGCAAAGAGGGACGAGGAGTAATCGCAGCGCA
TTACAGCAATATGGCAGTACACTCTGTGCTCTCGCTGCTGCTCGTGGCCA
CAGCATGCGTGTCAGCGTTCGTGGTGCCGTCAGGTACGTCTCATACAGGC
AGCTACATCTTGATTGCATGTTATCATGATGTGTGCATGCTGGTGGTGCG
CTCATCAGGTTTGCCACTACTATTCTCATCATCGTCTGCATCGCTTGATG
TGTGCTATGCTGTCAGGGGGGCTGGCACGTGTGTCAGGTGCGTGAGATGA
TGTAGTTGTCGCTGGACATGGTTCCTTCTTTGCTTGCTTTCATGCAAACT
TTCAAGAGCCTCAGTAAGTAAACAAACGCTGGTGCGCTGGGCGACGAGCT
GTGATGCCAGCTCCACTGGTGCTGCTGCCACTGCTGTGCATGCGCTTACT
ACCCTGGCAACGTCCTTTGTGCGAGCTGCCGTGCACCGGCATTGAGTTGT
TTAGGCTTACAAATCACCGCTGGCTGTAAGTCAGCAACCTGAAGCTCCCC
TGTCCTTTAAGATGGTTGCGCAGTGTGGTTGCTAGTTGCTGCGAAGCATC
GGCTGCCAAGTTGCTCACGTCACTGACCGGATAGGCTTATTGGCGCTTTG
GCTCGAATGACCAACTGCACGATGCTGGCTTCTAGGAGCATAATTTGATC
CGCTTACCACTCTTCCCAGCAATTATTTTGTCCGTTGACCAAGGACTTGA
CTACAATGCAGTTTGCGATACTCCTGAACCCCCAGCAACACACCCAGCCT
CTATGAGAACAACAGGTCACCGATGCTGCAGGTCAAGTCAGAGCATTACA
TTGTGTTTCGTTCAGTGCGTGAAGCGATTGCTTATGCTGGTCGAGAACGG
GTGCACATTGACAAGGAACCCATAACACACGGTCAAGGCTTGCTGCAGCG
GCTGCCGTCAACGCATTGCCCTGCCCCTTTTGCAAGGCCTTCCTGCATAG
CATTGCCGGTTTTCCCGCGTCCATCGGTATCAAATCACGATTGCTCGCCT
GTGGGGCGACCCTCATCAGTTCTGCATTCCGCGCTTTGGCCCTCAATTCT
GGTCATGATCATGGTGTGGACGTCTCTGTCACGATCGTGATGATGCTGAA
GGTCGCGGAGATGCCATTCACGCTGCTAGACGGCACCGCCGCCAGCGCGC
ATCCACCGCAACACGCATGATCACGCATCGGGCACTCCCTCCGCAAAATG
AGCACCACAGCGCCTCAGCCTCGCACCGTATCCATCTTCATGGTCGTGCT
CACGAACACCCTTCCCTTCATGTGCACGGCGGCAGCAGCGCGCAGCCAAG
CGCCTTCTATGCTGCTGGGCGGCGTCGCCGCCGCCGCGGCCGCCTCCATC
ATCAGCACGGCGCCGGCGTCGACGGACTACCTGCGCACCCTGCACAATCA
GCCGGTGAACTCGTGGACGATGCTCAGCAAGACGGAGACGCGCGAGGGGT
TTTACGGGGAGTACTCGGTGGACGTGAAGGAGCAGGAGGTGGACAATGCG
GACTCGACGTTCAAGTCGAAGGAGGCCACGGAGAAGGGCAAGGTGCGCAT
TGCGTTTGATCATTTGTGCTGATTACGTGTAGAGTACACCGTCTGTGACG
TGGCACACTCTGCCTCCAGGCGTGCATGTGTGGTGTCCATATGTAAAGGA
GCAGGAGGTGGACAATGCGGACTCGATGTTCAAGTCGAAGGAGGCCAAGG
TGCGCGTTGCGGTTGATCATTTGCGTTGGATTAGGTTACATGCAGGCTAC
ACCGTCTGTAACGTGTTGCGGTTGCGTTTTGTGTTGATTACGTCACATGT
AGACTACGCCGTCTGTAACATTTTCTAGGTTGAACATTCGTGTTGGATCA
CATTACATGTGGACTACACCATCTGTCACATGACGCGCTCCACACTATGG
GTGTGTGTAACCATGGTGGTATACGATGCAAGGACTGATGTGGATTGCAA
CTTCAAGTTCAAGGATGCCAATGCAGATGTGGTGACAAGGCACCTTGCGT
GCTTTAGCGCATGAGGGGAATAGGTATGCGTCGAAGGTTGATGTAAACAG
CTGAGCTCAGACAGCCTCCCCGATCAGTGACGCATGCATCGTAGCGTTTT
TTCCATGCTTTCCTGAAGACCTGCTCCACAGCTGGCATCGTCGTGAAACG
CAGCACAAATGCTCACAGTCAGTATTTTACCGAGGTGCAGGATGTATGTA
TGCTTGAACGAAAGTCAATGAAAGGGGACTGCAGGATCCTGCACAATGCA
TGTATTGGCATGTTCGCGTAATCAAGGCAACACACTGCTCAACACTTTAT
GAGTAGCACTGCGCATAGCGGAAGGCAGACAGCAGATAGTGGACTTCAAC
TTCAACTTAGCAGATCAGCTCGCTCGGGCACATGGAAGCACGCATCTGCA
ACGGTTTCAATGATACAGGAGTGCCTTCAAGCACGTAGTGTTATGTCAGC
TCGAGAGGCATGTGATAGCTGTTGCATGCTGACAGAGGCTTGACACGTGT
AGTACAAAGGGAATGCCCACGTTGTGGTGTTTAGGGGCTGGAGTGAGTAT
GTGGCAGCGCTCTAGTCTAGACAGAATGCTCTGGGGTATGCATGGTAAAG
CACCATATACATACCTTGCAGGCCGTGCCTGCTACCACCGCAGGCCCTGA
TCAGCATCATGCATGCGTACACTTCACAAGTACTACAGAAGACCATGACT
GTGTGCGGAAGCGAGAGTGTTATGGCAGGGGGGGTTATGGTGTAAGTTTG
AGGGAAGGATGAGATAAAAAAAATTTAACAAGACAAGCAAAAAAGTCAAT
AAGAAACAAGCAGGTGTCAGCATCCTGGAGATAATAGGGGAGCACTGCGG
CAGTTGCAGTGGCAGTTACACAGCGAGGCTTTAGTTGTGGTGGCAATGTA
CCTGCAGCGAAAAGTCTTGAATGTCCCACTGGAATTTGATGAGCAGGCGG
TCAATCATAACTTCAATCAGGATTTCAGCATCAAGCTCTGTAAAGCCACC
AACAAATCCAGTGCATGCCGCATAATCAACACAGAGAGCACACGCAGGCC
TTTTTAAAGCAAAACAAAATACGTGTTGAGAGCAAAAACCTAATAATGCG
GCTTCGTAGCACAGGGCTAGTTGGTTGTACCCTATTTCTTAATGTTGGCC
TTAAATTGGACACATTCCATGGGTCGATGACACCACTATGAAGTTTAGCT
CCGTAAGTTCTTTCAGCGCTTTGCAAAACCTCACTCAATGTTGAAGTCCA
CGAGTTTTCCCCAGGCGCTTCTTGCGTGGCAGACTTGTTGGCAGCACTGG
CCACTGTGTCGCAGTTACAAAGGCTGGAAGCAGCAGACGCGGACTTCAGT
ACTGCCAAACTTACGCGGTCCGATGAAGTGTGCAGTGGAATTCATCCGTG
CTCAGCGCAATCATTCGTACACGTTGAATTCAGCCAAGCCGCGTGCGATG
CATGTGATAAAGTGCTTCAGTGAAAGGCCCGTCACCCCCGCTGCATGTAA
TCAAACCTCAAGTCCTGTGTGTACTTCTGCTCGAGGGACAAAACCCCTCC
CAAATATGCACAAGATCTGCCCCCTAGTTTGCAATGTGAGGGCTATGTTC
AATATTCATCCCCTCAAGAGGCGCCACCGGCACCTTCTTCTGCGCCCTGT
CTCACGGTCTGACCCCCCCCCCTCCCCCCCCTCCCCTGCTGTCGCAGAAC
AAGTACAACGCCGTGCTGCTGATACTGCTGGTGGGCTCCTTTGTCATCCC
AATGGTCCAATACTGGTGGTACATCCGCGACGAGGACGTTGACTATGAGT
AAACGAGTAACTCCGAGTCGTACTGCCCCTCAATAAAGAGCACCTTTGAC
GAGCATCGAGAAGCCGCAGCTGCGCACACAGGAGCTGTGCTAGCACCTGG
GATGGGTGGGTTTGTG

Coding sequence (CDS) from alignment at Contig_21:555304..559269+

>mRNA_7167 ID=mRNA_7167|Name=jgi.p|Trimin1|348235|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=453bp|location=Sequence derived from alignment at Contig_21:555304..559269+ (Tribonema minus UTEX_B_3156 )
ATGGCAGTACACTCTGTGCTCTCGCTGCTGCTCGTGGCCACAGCATGCGT
GTCAGCGTTCGTGGTGCCGTCAGGGGGGCTGGCACGTGTGTCAGCGCGCA
GCCAAGCGCCTTCTATGCTGCTGGGCGGCGTCGCCGCCGCCGCGGCCGCC
TCCATCATCAGCACGGCGCCGGCGTCGACGGACTACCTGCGCACCCTGCA
CAATCAGCCGGTGAACTCGTGGACGATGCTCAGCAAGACGGAGACGCGCG
AGGGGTTTTACGGGGAGTACTCGGTGGACGTGAAGGAGCAGGAGGTGGAC
AATGCGGACTCGACGTTCAAGTCGAAGGAGGCCACGGAGAAGGGCAAGAA
CAAGTACAACGCCGTGCTGCTGATACTGCTGGTGGGCTCCTTTGTCATCC
CAATGGTCCAATACTGGTGGTACATCCGCGACGAGGACGTTGACTATGAG
TAA