Trimin1|348235|estExt_Genemark1.C_Ctg_210057 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348235
Unique NameTrimin1|348235|estExt_Genemark1.C_Ctg_210057
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length151
Homology
BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A835ZB47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB47_9STRA)

HSP 1 Score: 278 bits (712), Expect = 1.540e-94
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
Query:    1 MAVHSVLSLLLVATACVSAFVVPSGGLARVSARSQAPSMLLGGVAAAAAASIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDEDVDYE 150
            MAVHSVLSLLLVATACVSAFVVPSGGLARVSARSQAPSMLLGGVAAAAAASIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDEDVDYE
Sbjct:    1 MAVHSVLSLLLVATACVSAFVVPSGGLARVSARSQAPSMLLGGVAAAAAASIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDEDVDYE 150          
BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A7S2CEE7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CEE7_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.430e-28
Identity = 60/109 (55.05%), Postives = 80/109 (73.39%), Query Frame = 0
Query:   37 PSMLLGGVAAAAAASIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDE 145
            P  L+   A AAAA+++S+ P  T  L  + N P+      +K ET+EG YGEY V+VKEQ VD+A STFKS +AT+KGKNKY AVL +LLVGSF+IPM+QY+WY+R++
Sbjct:   36 PVALVDVAAGAAAAAVLSSQPMDTSMLSNMANVPM--MVSATKYETKEGIYGEYQVEVKEQAVDDARSTFKSAKATKKGKNKYVAVLGVLLVGSFLIPMLQYFWYVRED 142          
BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: D8LTU5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTU5_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 5.660e-25
Identity = 66/142 (46.48%), Postives = 89/142 (62.68%), Query Frame = 0
Query:   16 CVSAFVVPS----GG---LARVSARSQAPSMLL--GGVAAAAAASIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQ--EVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDED 146
            C  AFV P     GG     R +A +  P M+L     A AA A +I + P + ++L +  +QP +   +++  ETREG YG Y V+V+E+  E D   STFK KE TE+G++KY +VL +LL GSFVIPMVQYWWYIRD+D
Sbjct:   17 CSQAFVTPPVTGLGGRVSAGRSAASASGPRMMLPMAPFAGAAVAHLIGSNPINPEHLVSAKSQPTH---LVAYKETREGLYGPYEVEVQERAPETDFGISTFKKKEETEEGRDKYTSVLAVLLAGSFVIPMVQYWWYIRDDD 155          
BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A7R9U6V2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6V2_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.980e-21
Identity = 41/69 (59.42%), Postives = 55/69 (79.71%), Query Frame = 0
Query:   78 SKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDED 146
            ++TE R+G Y EY+++ K Q+ DNA S FKSKE T  GKN+Y AVL +L+VGSF+IPM QYWWYI+D++
Sbjct:   65 AETEVRQGMYKEYTIEKKSQQYDNAASGFKSKEETASGKNRYVAVLGVLVVGSFIIPMAQYWWYIKDDE 133          
BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A7S2B691_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B691_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.650e-20
Identity = 56/120 (46.67%), Postives = 78/120 (65.00%), Query Frame = 0
Query:   32 ARSQAPSMLLGGVAAAAAASIISTAPASTDYLRTLHNQPVNSWTM------LSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDE 145
            ARS   + L    A  AAAS+++ + A+T        +PV++  M      ++  ETREG YG Y V++K Q+VD+A  TFKSK+ T KGK KY AVL +LL GSFVIPM+QY+WY+R++
Sbjct:   34 ARSTPVAKLDSRAAGLAAASLLAASVATTAV------EPVSAHAMYDAPMTVAVKETREGVYGTYEVEIKPQDVDDAAGTFKSKDDTVKGKKKYIAVLGVLLFGSFVIPMLQYFWYVRED 147          
BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A1Z5K6I3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6I3_FISSO)

HSP 1 Score: 90.5 bits (223), Expect = 3.690e-20
Identity = 40/71 (56.34%), Postives = 55/71 (77.46%), Query Frame = 0
Query:   76 MLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDED 146
            +L++   REG YGEY +D+ EQ+ D+A STFKS + T+  K KY A+L IL+VGSF+IPM QYWWY++D+D
Sbjct:   68 VLAEKVIREGVYGEYEIDLPEQKYDDARSTFKSAKETKTKKGKYTALLAILIVGSFIIPMAQYWWYVKDDD 138          
BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A7S3V6F5_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6F5_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 3.540e-19
Identity = 46/102 (45.10%), Postives = 69/102 (67.65%), Query Frame = 0
Query:   44 VAAAAAASIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDE 145
            VAA  AA++I+   A  +    + N   +S  +++ TETR G Y +Y +D+  Q VDNA+S+FKS + T+  K KY A+L IL+VGSF+IPM QY+WY++D+
Sbjct:   40 VAATIAANVINPDVAIANDFAMMPNVFQSSNIVVAATETRSGVYKDYDIDLTPQTVDNAESSFKSAKETKSKKGKYTAILAILIVGSFIIPMAQYFWYVKDD 141          
BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: W7T3I2_9STRA (Uncharacterized protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3I2_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 4.110e-19
Identity = 40/79 (50.63%), Postives = 57/79 (72.15%), Query Frame = 0
Query:   67 HNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDE 145
            HNQ   S T+  + E+R+G Y EY+V+   Q+ +NA+ TFK+K+ T   KNKY A+L +LLVGS VIPM QY+WY++D+
Sbjct:   82 HNQAFTSTTLSKEVESRQGMYKEYTVEKTGQQYENAEGTFKTKDETAGNKNKYVAILAVLLVGSCVIPMAQYFWYVKDD 160          
BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A7S3L8Q2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L8Q2_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 4.110e-19
Identity = 51/106 (48.11%), Postives = 69/106 (65.09%), Query Frame = 0
Query:   43 GVAAAA--AASIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDED 146
            G AAAA  A+S++S AP   D      +  V     +++   REG YGEY VDV +Q  D+A STFKS + T+  K KY A+L +L+VGSF+IPM QY+WY+RD+D
Sbjct:   37 GAAAAALIASSVLSWAPPPADASFAFTSSQV-----VAEKVIREGVYGEYEVDVPDQVYDDARSTFKSAKETKTKKGKYTALLAVLIVGSFIIPMAQYFWYVRDDD 137          
BLAST of jgi.p|Trimin1|348235 vs. uniprot
Match: A0A7R9WM32_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WM32_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.150e-18
Identity = 40/75 (53.33%), Postives = 58/75 (77.33%), Query Frame = 0
Query:   72 NSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDED 146
            +S  M+++  TR+G YG+Y VD+  Q VD+A+STFKS + T+  K KY A+L IL+VGSF++PM QY+WY+RD+D
Sbjct:   67 SSTNMVAEKVTRQGMYGDYEVDLT-QTVDDAESTFKSAKETKTKKGKYTAILAILIVGSFIVPMAQYFWYVRDDD 140          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348235 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZB47_9STRA1.540e-94100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CEE7_9STRA3.430e-2855.05Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
D8LTU5_ECTSI5.660e-2546.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7R9U6V2_9STRA4.980e-2159.42Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2B691_9STRA2.650e-2046.67Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1Z5K6I3_FISSO3.690e-2056.34Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3V6F5_9STRA3.540e-1945.10Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
W7T3I2_9STRA4.110e-1950.63Uncharacterized protein n=4 Tax=Monodopsidaceae Ta... [more]
A0A7S3L8Q2_9STRA4.110e-1948.11Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7R9WM32_9STRA1.150e-1853.33Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_21contigContig_21:555364..559155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348235mRNA_7167Tribonema minus UTEX_B_3156 mRNAContig_21 555304..559269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348235|estExt_Genemark1.C_Ctg_210057 ID=Trimin1|348235|estExt_Genemark1.C_Ctg_210057|Name=jgi.p|Trimin1|348235|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=151bp
MAVHSVLSLLLVATACVSAFVVPSGGLARVSARSQAPSMLLGGVAAAAAA
SIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVD
NADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDEDVDYE
*
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