mRNA_713 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157084 vs. uniprot
Match: A0A835Z4N1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N1_9STRA) HSP 1 Score: 584 bits (1506), Expect = 4.460e-211 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 1 Query: 1 TMADTTRISVKKFDPSKLVQKHFVAIMTAKRGSGKSYLTKDILYRLHCEGFPRCCIFSGTEGANKFFSDFIPEVFVHSPLDLNTLTHIWNTQKEIILKQRCGHLDENEDTRILIVLDDCSFDKKTFTSQVIREMLCNGRHYKLTLIITLQYLLDLPPAMRSNVDFGFFFRDNIKTNRERLYRQFAGFYPDYRTFEAVFEACTANYECMCVDNTVSSTDHTDIVSYYKAEAVDFKFGPPSLWKFHDKLFISEEDEYILRQKMTLQSASKNSMTKVSGNSSITVVHEA 858 TMADTTRISVKKFDPSKLVQKHFVAIMTAKRGSGKSYLTKDILYRLHCEGFPRCCIFSGTEGANKFFSDFIPEVFVHSPLDLNTLTHIWNTQKEIILKQRCGHLDENEDTRILIVLDDCSFDKKTFTSQVIREMLCNGRHYKLTLIITLQYLLDLPPAMRSNVDFGFFFRDNIKTNRERLYRQFAGFYPDYRTFEAVFEACTANYECMCVDNTVSSTDHTDIVSYYKAEAVDFKFGPPSLWKFHDKLFISEEDEYILRQKMTLQSASKNSMTKVSGNSSITVVHEA Sbjct: 1 TMADTTRISVKKFDPSKLVQKHFVAIMTAKRGSGKSYLTKDILYRLHCEGFPRCCIFSGTEGANKFFSDFIPEVFVHSPLDLNTLTHIWNTQKEIILKQRCGHLDENEDTRILIVLDDCSFDKKTFTSQVIREMLCNGRHYKLTLIITLQYLLDLPPAMRSNVDFGFFFRDNIKTNRERLYRQFAGFYPDYRTFEAVFEACTANYECMCVDNTVSSTDHTDIVSYYKAEAVDFKFGPPSLWKFHDKLFISEEDEYILRQKMTLQSASKNSMTKVSGNSSITVVHEA 286
BLAST of jgi.p|Trimin1|157084 vs. uniprot
Match: A0A836CN20_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN20_9STRA) HSP 1 Score: 369 bits (946), Expect = 9.310e-126 Identity = 168/283 (59.36%), Postives = 226/283 (79.86%), Query Frame = 1 Query: 7 ADTTRISVKKFDPSKLVQKHFVAIMTAKRGSGKSYLTKDILYRLHCEGFPRCCIFSGTEGANKFFSDFIPEVFVHSPLDLNTLTHIWNTQKEIILKQRCGHLDENEDTRILIVLDDCSFDKKTFTSQVIREMLCNGRHYKLTLIITLQYLLDLPPAMRSNVDFGFFFRDNIKTNRERLYRQFAGFYPDYRTFEAVFEACTANYECMCVDNTVSSTDHTDIVSYYKAEAVDFKFGPPSLWKFHDKLFISEEDEYILRQKMTLQSASKNSMTKVSGNSSITVVHE 855 A+T RISVK+FD S L +K+F +T KRG+GKSYLTKDI+Y LH GFPRCC+FS TE AN FFS F+P VF+HSP DLN L +I QK++I+KQ+ G + ++DTR+LIVLDDC++DKK +S +IRE++ NGRHY ++L++TLQYL+D P++R+NVD F +DNIK NRER+++ F G + DY+ FEAVFE+CTAN+EC+CVDNT+SSTD+ DIVSYYKA +FKFG SLW+FHDK+++SEEDE+++RQ+M +Q A + S+TKV+ + ITVV E Sbjct: 6 ANTNRISVKRFDISMLARKNFTMTLTGKRGTGKSYLTKDIMYHLHKAGFPRCCVFSQTESANGFFSTFVPGVFIHSPFDLNVLANILKQQKDLIMKQKLGQIPADQDTRLLIVLDDCAYDKKILSSPIIREIMMNGRHYFISLVVTLQYLVDFAPSLRANVDVALFLKDNIKGNRERIWKHFCGMFSDYKVFEAVFESCTANFECLCVDNTISSTDNEDIVSYYKAGEHEFKFGNRSLWRFHDKVYLSEEDEFVMRQQMAVQQAVQQSVTKVTSSGLITVVRE 288
BLAST of jgi.p|Trimin1|157084 vs. uniprot
Match: A0A835Z5I5_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I5_9STRA) HSP 1 Score: 365 bits (936), Expect = 2.880e-124 Identity = 165/283 (58.30%), Postives = 226/283 (79.86%), Query Frame = 1 Query: 7 ADTTRISVKKFDPSKLVQKHFVAIMTAKRGSGKSYLTKDILYRLHCEGFPRCCIFSGTEGANKFFSDFIPEVFVHSPLDLNTLTHIWNTQKEIILKQRCGHLDENEDTRILIVLDDCSFDKKTFTSQVIREMLCNGRHYKLTLIITLQYLLDLPPAMRSNVDFGFFFRDNIKTNRERLYRQFAGFYPDYRTFEAVFEACTANYECMCVDNTVSSTDHTDIVSYYKAEAVDFKFGPPSLWKFHDKLFISEEDEYILRQKMTLQSASKNSMTKVSGNSSITVVHE 855 A T RISVK+FD SKL +KHF ++T KRGSGKS+L KDI++ LH +PRCCIFS TE AN FFS+F+P +F+HSP DLN L +I QK++I++Q+ G + ++DTR+L+VLDDC++D++ S V+RE++ NGRHY ++LI+TLQYL+DL P++R+NVD F +DNI+ NRER+++ FAGFY ++ FEAVFE+CTAN+EC CVDNT+SST H DIVSYYKA DF+FG PSLWKFHD++++SEEDE+++RQ+M +Q A + S+TKV+ + ITVV E Sbjct: 4 APTNRISVKRFDMSKLTKKHFTLVLTGKRGSGKSFLCKDIIFHLHEAKYPRCCIFSQTENANGFFSEFVPGIFIHSPFDLNVLANIIKQQKDLIMRQKLGQIPADQDTRLLLVLDDCAYDRRILASPVMREIMMNGRHYFISLIVTLQYLVDLAPSLRANVDVALFLKDNIRGNRERVWKHFAGFYENFHVFEAVFESCTANFECFCVDNTLSSTRHEDIVSYYKASDRDFRFGHPSLWKFHDRVYLSEEDEFLMRQQMAVQQAVQQSVTKVTSSGVITVVRE 286
BLAST of jgi.p|Trimin1|157084 vs. uniprot
Match: A0A835YWY0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWY0_9STRA) HSP 1 Score: 240 bits (613), Expect = 2.390e-75 Identity = 115/263 (43.73%), Postives = 173/263 (65.78%), Query Frame = 1 Query: 34 KFDPSKLVQKHFVAIMTAKRGSGKSYLTKDILYRLHCEGFPRCCIFSGTEGANKFFSDFIPEVFVHSPLDLNTLTHIWNTQKEIILKQRCGHLDENEDTRILIVLDDCSFDKKTFTSQVIREMLCNGRHYKLTLIITLQYLLDLPPAMRSNVDFGFFFRDNIKTNRERLYRQFAGFYPDYRTFEAVFEACTANYECMCVDNTVSSTDHTDIVSYYKAEA-VDFKFGPPSLWKFHDKLFISEEDEYILRQKMTLQSASKNSMTK 819 KFDP ++ + + KRG+GKS L KD+LY L+ G PRC FS TE AN +F F+P VFVH PLD +TL +W QKE++L++R G L+ + DTR+++V+DDC++ K+ S +RE+ NGRH+ + I+TLQYL+DL AMRSNVD F+ ++ N+ER+Y + GF P + TF+ +F A TANYE V++ S D IV++Y+A+A ++FK+G P+LW++HD+++ S D+Y Q+ S + T+ Sbjct: 7 KFDPKEMTRSPACVAIVGKRGTGKSMLIKDLLYHLNLAGVPRCICFSATEEANSYFGTFLPSVFVH-PLDPDTLDRVWKAQKELVLQKRVGQLNPDTDTRLVLVMDDCAYHKQMMKSATLREIFMNGRHHGIYFIVTLQYLIDLNVAMRSNVDCWFYLKELSHKNQERIYNESCGFLPSFLTFQDLFMASTANYEAFVVNSRCKSNDPQKIVAHYRADANLNFKYGAPALWRYHDEVYESASDKYQRLQRTQQDSRPMSEATR 268
BLAST of jgi.p|Trimin1|157084 vs. uniprot
Match: A0A835Z4P3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4P3_9STRA) HSP 1 Score: 233 bits (593), Expect = 3.010e-72 Identity = 114/250 (45.60%), Postives = 164/250 (65.60%), Query Frame = 1 Query: 34 KFDPSKLVQKHFVAIMTAKRGSGKSYLTKDILYRLHCEGFPRCCIFSGTEGANKFFSDFIPEVFVHSPLDLNTLTHIWNTQKEIILKQRCGHLDENEDTRILIVLDDCSFDKKTFTSQVIREMLCNGRHYKLTLIITLQYLLDLPPAMRSNVDFGFFFRDNIKTNRERLYRQFAGFYPDYRTFEAVFEACTANYECMCVDNTVSSTDHTDIVSYYKAE-AVDFKFGPPSLWKFHDKLFISEEDEYILRQK 780 KFD S++ + + KRGSGKS L KDILY LH PRC FS TE AN+FFS F+P+VFVH+ L+ +TL+++W QKE+ +++ G L DTR+ I+LDDC+FDK S V++E+ NGRH+ + I+TLQYL+DL +MRSNVD FF ++ N+ER+Y + GF P + F+ +F A T+NYE V+ S+D I+ YYKA+ ++F+FGP S+W+FH ++ S D Y+ Q+ Sbjct: 7 KFDMSEVSRSPACVAICGKRGSGKSVLIKDILYHLHVARVPRCVCFSATEDANQFFSGFVPDVFVHA-LNHDTLSNMWQAQKELAMQKAVGQLPPGTDTRLAIILDDCAFDKTVMKSAVLKEIFMNGRHHGVFFIVTLQYLIDLNVSMRSNVDVFFFLKELNLKNQERIYHESCGFLPCFGAFQDLFMASTSNYEAFVVNGRCKSSDAQQIIHYYKADPTLNFRFGPASIWRFHSTVYESATDRYVRMQR 255
BLAST of jgi.p|Trimin1|157084 vs. uniprot
Match: Q6XM75_9PHYC (FirrV-1-A12 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM75_9PHYC) HSP 1 Score: 204 bits (520), Expect = 4.500e-61 Identity = 103/285 (36.14%), Postives = 175/285 (61.40%), Query Frame = 1 Query: 10 DTTRISVKKFDPSKLVQKHFVAIMTAKRGSGKSYLTKDILYRLHCEGFPRCCIFSGTEGANKFFSDFIPEVFVHSPLDLNT-LTHIWNTQKEIILKQRCGHLDENEDTRILIVLDDCSFDKKTFTSQVIREMLCNGRHYKLTLIITLQYLLDLPPAMRSNVDFGFFFRDNIKTNRERLYRQFAGFYPDYRTFEAVFEACTANYECMCVDNTVSSTDHTDIVSYYKAE-AVDFKFGPPSLWKFHDKLFISEEDEYILRQKMTLQSASKNSMTKVSGNSSITVVHEA 858 D I + F+ KHF A++ K+ +GKS L KDILY +H + PR C+FSGTE +N F+ +FIP++F+ + LT I +QK+I ++++ G ++ D+RI++VLDD + K T +++R++ NGRH++++LI+ QY +DL +R+N D+ F + N + + L+ + G + + F+ V EACTA+Y+C+ +DNT ST+ TD+ +YKA+ ++KFG P LW++H + ++SE+ Y +QK +K S ++ + VVH+A Sbjct: 2 DERTIKLSAFNAKAACSKHFNAVVIGKKHTGKSTLIKDILYNVHKQKVPRICVFSGTEESNGFYREFIPDLFIFDDSMVEEKLTQIVESQKKIGMQKQLGECGDDVDSRIVVVLDDVGYKKNTLKCEILRQIFMNGRHHQISLIVACQYCMDLAIDLRTNADYVFVLKQNNMNSIKNLHETYFGSFEKKKDFQTVLEACTADYQCLVLDNTKPSTNTTDVCFWYKAKYGKEYKFGCPLLWEYHGRWYMSEKQRYQSQQK------TKPSRSRTGTHQQQLVVHKA 280
BLAST of jgi.p|Trimin1|157084 vs. uniprot
Match: A0A836CRE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRE2_9STRA) HSP 1 Score: 202 bits (515), Expect = 7.490e-61 Identity = 100/250 (40.00%), Postives = 156/250 (62.40%), Query Frame = 1 Query: 34 KFDPSKLVQKHFVAIMTAKRGSGKSYLTKDILYRLHCEGFPRCCIFSGTEGANKFFSDFIPEVFVHSPLDLNTLTHIWNTQKEIILKQRCGHLDENEDTRILIVLDDCSFDKKTFTSQVIREMLCNGRHYKLTLIITLQYLLDLPPAMRSNVDFGFFFRDNIKTNRERLYRQFAGFYPDYRTFEAVFEACTANYECMCVDNTVSSTDHTDIVSYYKAEA-VDFKFGPPSLWKFHDKLFISEEDEYILRQK 780 +FDP ++ ++ + RG+GKS L KDILY ++ G PRC +FSGTEGAN +FS+F+P VFVH P+D +TL +W QKE++LK+ G L + +T +++VLDDC+F++K YL+DL AMRSNVD FF ++ + NRE++Y++ GF P+Y FE +F TA+YE V++ +S++ DIV +YKA+A + +++GPP LW++H ++ S + Y +Q+ Sbjct: 7 RFDPREISKRPVCIAIVGMRGTGKSVLLKDILYHINEAGAPRCVVFSGTEGANSYFSEFVPGVFVH-PMDQDTLHSVWERQKELVLKKAAGGLPASTNTSLVLVLDDCAFNRK--------------------------YLIDLNVAMRSNVDIYFFLKELNRMNREKIYKETCGFLPNYHVFEQLFNDATADYETFVVNSRCTSSNPEDIVHHYKADAGLQYRYGPPCLWRYHHSVYESPQQRYQRQQE 229
BLAST of jgi.p|Trimin1|157084 vs. uniprot
Match: A0A6C0LXK3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LXK3_9ZZZZ) HSP 1 Score: 199 bits (506), Expect = 3.270e-59 Identity = 102/242 (42.15%), Postives = 147/242 (60.74%), Query Frame = 1 Query: 22 ISVKKFDPSKLVQKHFVAIMTAKRGSGKSYLTKDILYRLHCEGFPRCCIFSGTEGANKFFSDFIPEVFVHSPLDLNTLTHIWNTQKEIIL---KQRCGHLDENEDTRILIVLDDCSFDKKTFTSQVIREMLCNGRHYKLTLIITLQYLLDLPPAMRSNVDFGFFFRDNIKTNRERLYRQFAGFYPDYRTFEAVFEACTANYECMCVDNTVSSTDHTDIVSYYKAEAVD-FKFGPPSLWKFHD 735 + +KKFD ++ V + KR +GKS+L KD+LY H + P + SGTEGAN F+S+ +P +F+H + ++ QK++I K+ + N D R ++LDDC +DK ++ IR + NGRHYK+ IIT+QY L +PP +R+NVDF F R+N +NR+RLY Q+AG +P + F V + CT NYEC+ V+N S D V +YKAEA D F+ G P LW+FHD Sbjct: 9 LELKKFDMG-MISDDKVVVFIGKRETGKSFLVKDMLY--HHQDIPVGTVISGTEGANAFYSNMMPSIFIHGEYKPELIQNVLKRQKKVITQIKKENEEYGSCNIDPRAFLILDDCLYDKSWINNKYIRSLFMNGRHYKMMFIITMQYSLGIPPNLRTNVDFVFILRENYVSNRKRLYEQYAGMFPHFDIFCQVMDQCTENYECIVVNNNAKSNKLEDQVFWYKAEAHDDFQLGAPQLWQFHD 247
BLAST of jgi.p|Trimin1|157084 vs. uniprot
Match: C7U0C4_9PHYC (Uncharacterized protein n=9 Tax=root TaxID=1 RepID=C7U0C4_9PHYC) HSP 1 Score: 196 bits (497), Expect = 4.060e-58 Identity = 100/268 (37.31%), Postives = 158/268 (58.96%), Query Frame = 1 Query: 22 ISVKKFDPSKLVQKHFVAIMTAKRGSGKSYLTKDILYRLHCEGFPRCCIFSGTEGANKFFSDFIPEVFVHSPLDLNTLTHIWNTQKEIILKQRCGHLDENEDTRILIVLDDCSFDKKTFTSQVIREMLCNGRHYKLTLIITLQYLLDLPPAMRSNVDFGFFFRDNIKTNRERLYRQFAGFYPDYRTFEAVFEACTANYECMCVDNTVSSTDHTDIVSYYKAEA-VDFKFGPPSLWKFHDKLFISEEDEYILRQKMTLQSASKNSMTKV 822 + ++KF P + V + KR +GKS L KDI+Y H + P + SGTE N F+ +FIP++FV+ D + + + + Q++I+ G +N ++LDDC +D K IR+ NGRHY + ++T+QY++DLPPA+R+NVD+ F R+NI NRE+LY+ F G +P + F V +ACT NYEC+ +DNTV S TD V +YKA F+ G P+LW+ H K++ +Y+ +++ + A+K + K+ Sbjct: 3 LQLRKFKPEAMSDDR-VCVFIGKRNTGKSTLVKDIMY--HKKHIPAGIVLSGTEEGNHFYGEFIPDLFVYGEYDRDAIERVISRQRKIV-----GTKGKNPYNGAFMLLDDCMYDSKFLKDTCIRQCFMNGRHYNIFFMLTMQYVMDLPPALRANVDYVFILRENIIQNREKLYKSFFGIFPSFDMFSKVMDACTENYECLVLDNTVKSNKITDCVFWYKATVRKGFRVGSPNLWQLHKKMY---NPKYLDQKEDDAKKATKKTNLKI 259
BLAST of jgi.p|Trimin1|157084 vs. uniprot
Match: A0A0P0CRU3_9PHYC (Uncharacterized protein n=7 Tax=root TaxID=1 RepID=A0A0P0CRU3_9PHYC) HSP 1 Score: 194 bits (494), Expect = 1.080e-57 Identity = 100/270 (37.04%), Postives = 159/270 (58.89%), Query Frame = 1 Query: 22 ISVKKFDPSKLVQKHFVAIMTAKRGSGKSYLTKDILYRLHCEGFPRCCIFSGTEGANKFFSDFIPEVFVHSPLDLNTLTHIWNTQKEIIL--KQRCGHLDENEDTRILIVLDDCSFDKKTFTSQVIREMLCNGRHYKLTLIITLQYLLDLPPAMRSNVDFGFFFRDNIKTNRERLYRQFAGFYPDYRTFEAVFEACTANYECMCVDNTVSSTDHTDIVSYYKAEA-VDFKFGPPSLWKFHDKLFISEEDEYILRQKMTLQSASKNSMTKV 822 + ++KF P + V + KR +GKS L KDI+Y H + P + SGTE N F+S+FIP++FV+ D + + + Q++++ KQ CG ++LDDC +D K IR+ NGRH+K+ ++T+QY +DLPPA+R+NVD+ F R+NI NRE+LY+ F G +P + F V +ACT NYEC+ +DNTV S D V +YKA +F+ G P LW+ H+K++ +++ +++ + A+K + K+ Sbjct: 3 LQLRKFKPETISDDR-VCVFIGKRNTGKSTLVKDIMY--HKKHLPAGIVLSGTEEGNHFYSEFIPDLFVYGDYDRDAIERVMARQRKLVGDGKQNCG---------AFMLLDDCMYDNKFLKDTCIRQCFMNGRHWKIFFMLTMQYCMDLPPALRANVDYVFLLRENILQNREKLYKSFFGIFPSFDMFNKVMDACTENYECLVLDNTVKSNRIQDCVFWYKASIRKNFRVGSPDLWRLHNKMY---NPKHMQQREDDAKKATKKTSLKI 257 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157084 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_713 ID=mRNA_713|Name=jgi.p|Trimin1|157084|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=861bp|location=Sequence derived from alignment at Contig_2:1192738..1193598+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ACCATGGCTGATACAACTAGGATCAGCGTCAAGAAATTCGATCCAAGTAAback to top protein sequence of jgi.p|Trimin1|157084 >Trimin1|157084|e_gw1.2.278.1 ID=Trimin1|157084|e_gw1.2.278.1|Name=jgi.p|Trimin1|157084|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=287bp TMADTTRISVKKFDPSKLVQKHFVAIMTAKRGSGKSYLTKDILYRLHCEGback to top mRNA from alignment at Contig_2:1192738..1193598+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_713 ID=mRNA_713|Name=jgi.p|Trimin1|157084|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=861bp|location=Sequence derived from alignment at Contig_2:1192738..1193598+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_2:1192738..1193598+ >mRNA_713 ID=mRNA_713|Name=jgi.p|Trimin1|157084|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=861bp|location=Sequence derived from alignment at Contig_2:1192738..1193598+ (Tribonema minus UTEX_B_3156 )back to top |