mRNA_7131 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: A0A835Z395_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z395_9STRA) HSP 1 Score: 412 bits (1059), Expect = 1.820e-140 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 1 Query: 1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAPDADLLGAAPTSFESSSFAADSPSVEMPKESFSPKQAVASPVSPPRPTAPSPTXXXXXXXXXXXXXXXXSKAVSTDAPAAPAAEEPTEDTAAXXXXXXXXXXXXXXXXXXXXXXPAAAPAVGLVSEEERRKARAARFGVPPAAEVQPTAEXXXXXXXXXXXXXSATASGAAPAAXXXXXXXXXXXXXXSESLLSGDKLIQRAERFNLSTPQSEEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPQGEEAXXXXXRAERFAGAGAADKAAAPAAAKGSHKQGARGRKAPADKGAALSSALSAGR 1095 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAPDADLLGAAPTSFESSSFAADSPSVEMPKESFSPKQAVASPVSPPRPTAPSPTXXXXXXXXXXXXXXXXSKAVSTDAPAAPAAEEPTEDTAAXXXXXXXXXXXXXXXXXXXXXXPAAAPAVGLVSEEERRKARAARFGVPPAAEVQPTAEXXXXXXXXXXXXXSATASGAAPAAXXXXXXXXXXXXXXSESLLSGDKLIQRAERFNLSTPQSEEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPQGEEAXXXXXRAERFAGAGAADKAAAPAAAKGSHKQGARGRKAPADKGAALSSALSAGR Sbjct: 1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAPDADLLGAAPTSFESSSFAADSPSVEMPKESFSPKQAVASPVSPPRPTAPSPTXXXXXXXXXXXXXXXXSKAVSTDAPAAPAAEEPTEDTAAXXXXXXXXXXXXXXXXXXXXXXPAAAPAVGLVSEEERRKARAARFGVPPAAEVQPTAEXXXXXXXXXXXXXSATASGAAPAAXXXXXXXXXXXXXXSESLLSGDKLIQRAERFNLSTPQSEEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPQGEEAXXXXXRAERFAGAGAADKAAAPAAAKGSHKQGARGRKAPADKGAALSSALSAGR 365
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: A0A7S3HLW8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLW8_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.450e-9 Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 1 Query: 1 MSE-VNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAPDADLL 162 MSE ++P+K+KV DLK ELAKRNLD+ GLK DL QRLQ ALD+EEFGL AD+L Sbjct: 6 MSEKLDPKKLKVQDLKDELAKRNLDTNGLKADLQQRLQTALDDEEFGLDDGADIL 60
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: T0RQ52_SAPDV (SAP domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RQ52_SAPDV) HSP 1 Score: 65.9 bits (159), Expect = 8.060e-9 Identity = 67/190 (35.26%), Postives = 90/190 (47.37%), Query Frame = 1 Query: 1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGL-APDADLLGAAPTSFESSSFAADSPS-VEMPKESFSPKQAVASPVSPPRPTAPSPTXXXXXXXXXXXXXXXXSKAVSTDAPAAPAAEEPTEDTAAXXXXXXXXXXXXXXXXXXXXXXPAAAPAVGLVSEEERRKARAARFGVP 564 M+ VNP+KMKVA++K ELAKR L + G+K +L+QRL+ ALDEEEFG A + L AA E+S + +P VE P + +PK+A SPP+ P P + DAP AAAP ++EEE+RKARAA+FG+P Sbjct: 1 MAIVNPKKMKVAEIKDELAKRGLSTVGVKAELVQRLELALDEEEFGSEAHEQATLAAA----EASPIGSATPEPVEEPAQE-APKEA-----SPPKHAEPVPE-------------------LVKDAPVV-----------------------------------AAAPVTVGMTEEEKRKARAAKFGIP 126
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: K3X8E5_GLOUD (SAP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8E5_GLOUD) HSP 1 Score: 65.1 bits (157), Expect = 2.450e-8 Identity = 99/262 (37.79%), Postives = 127/262 (48.47%), Query Frame = 1 Query: 16 PQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAPDADLLGAAPTSFESSSFAA--DSPSVEMPKESFSPKQAVASPVSPPRPTAPSPTXXXXXXXXXXXXXXXXSKAVSTDAPAAPAAE-EPTEDTAAXXXXXXXXXXXXXXXXXXXXXXPAAAPAVGLVSEEERRKARAARFGVPPAAEVQPTAEXXXXXXXXXXXXXSATASGAAPAAXXXXXXXXXXXXXXSESLLSGDKLIQRAERFNLSTPQSEEAK 792 P+KMKV++L+A L R L S GLK +LIQRL+ ALDEEEFG A ++ AP S +++ A ++PS P S SPK+ +P XXXXXXXXXXXXXXXX A S APA E P D+ + AV ++EEE+RKARAA+FG+P E X XXX AAPAA +K ++RAERFNL TP++ + K Sbjct: 7 PKKMKVSELRAALESRGLSSNGLKSELIQRLELALDEEEFGSAAQ-EMEDLAPPSEDAAKAEAAPEAPSPAAPAVSTSPKKQATTPKKKEADAXXXXXXXXXXXXXXXXXXXXXXPADSVGKKDAPAKEVTPEADSGS---------------------------AVQPLTEEEKRKARAAKFGIPLKHE------------DXLSXXXKRFNIAAAPAALTDEDR---------------EKKLKRAERFNLETPETLDLK 213
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: A0A6H5KM35_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM35_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 2.730e-8 Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 1 Query: 1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFG 138 MSE+N K+KV++LKAELA R+LD G K DL QRLQAALDEEEFG Sbjct: 1 MSEINVSKLKVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFG 46
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: A0A5D6XL70_9STRA (SAP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL70_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 3.170e-8 Identity = 94/262 (35.88%), Postives = 119/262 (45.42%), Query Frame = 1 Query: 16 PQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAPDADLLGAAPTSFESSSFAADSPSVEMPKESFSPKQAVASPVSPPRPTAPSPTXXXXXXXXXXXXXXXX---SKAVSTDAPAAPAAEEPTEDTAAXXXXXXXXXXXXXXXXXXXXXXPAAAPAVGLVSEEERRKARAARFGVPPAAEVQPTAEXXXXXXXXXXXXXSATASGAAPAAXXXXXXXXXXXXXXSESLLSGDKLIQRAERFNLSTPQSEEAK 792 P+KMKV++L+A L R L S GLK +LIQRL+ ALDEEEFG DA L A + + AA P E S VSP + +P XXXXXXXXXXXXX +KA +T+ P APA +P + A A ++EEE+RKARAA++G+P E E +ATA AA + S K +QRAERFNL T + E K Sbjct: 5 PKKMKVSELRAALESRGLSSNGLKSELIQRLELALDEEEFG--SDAQDLEALAPPKDDAKAAAALPHAE-------------STVSPTKQAKKAPEXXXXXXXXXXXXXAETHQSTKATATE-PDAPAVVKPADKAPEDV---------------------TAGDAPKALTEEEKRKARAAKYGIP-LKEEDKKVERAKRFNVSGGTGAAATAGAAA-----------------APSEEERAKKLQRAERFNLETADTLEKK 211
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: A0A7S3LF45_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LF45_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 6.990e-8 Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 1 Query: 1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGL 141 MSEV+ +KMKV +LKAEL+KR L + GLK +L+ RLQA LDEEEFGL Sbjct: 1 MSEVDIKKMKVTELKAELSKRGLSTDGLKAELVNRLQARLDEEEFGL 47
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: A0A3M6VRU1_9STRA (SAP domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRU1_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 8.490e-8 Identity = 31/46 (67.39%), Postives = 38/46 (82.61%), Query Frame = 1 Query: 1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFG 138 M+ VNP+KMKV++L+A L RNL S GLK +LIQRL+ ALDEEEFG Sbjct: 1 MTSVNPKKMKVSELRAALESRNLSSNGLKTELIQRLELALDEEEFG 46
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: A0A6H5KS91_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS91_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 1.120e-7 Identity = 33/49 (67.35%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAP 147 M E NP KMKVADLKAEL +R L TGLK DL QRLQ A+D +EFG P Sbjct: 1 MDEKNPLKMKVADLKAELGRRGLSQTGLKFDLAQRLQTAMDVDEFGTLP 49
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: D8LQH6_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH6_ECTSI) HSP 1 Score: 64.7 bits (156), Expect = 1.120e-7 Identity = 33/49 (67.35%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAP 147 M E NP KMKVADLKAEL +R L TGLK DL QRLQ A+D +EFG P Sbjct: 1 MDEKNPLKMKVADLKAELGRRGLSQTGLKFDLAQRLQTAMDVDEFGTLP 49 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_7131 ID=mRNA_7131|Name=jgi.p|Trimin1|348213|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1098bp|location=Sequence derived from alignment at Contig_21:122771..123868+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCGGAGGTAAACCCTCAGAAGATGAAGGTGGCGGACCTCAAGGCCGAback to top protein sequence of jgi.p|Trimin1|348213 >Trimin1|348213|estExt_Genemark1.C_Ctg_210013 ID=Trimin1|348213|estExt_Genemark1.C_Ctg_210013|Name=jgi.p|Trimin1|348213|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=366bp MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAPDback to top mRNA from alignment at Contig_21:122771..123868+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_7131 ID=mRNA_7131|Name=jgi.p|Trimin1|348213|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1098bp|location=Sequence derived from alignment at Contig_21:122771..123868+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_21:122771..123868+ >mRNA_7131 ID=mRNA_7131|Name=jgi.p|Trimin1|348213|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1098bp|location=Sequence derived from alignment at Contig_21:122771..123868+ (Tribonema minus UTEX_B_3156 )back to top |