Trimin1|348213|estExt_Genemark1.C_Ctg_210013 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348213
Unique NameTrimin1|348213|estExt_Genemark1.C_Ctg_210013
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length366
Homology
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: A0A835Z395_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z395_9STRA)

HSP 1 Score: 412 bits (1059), Expect = 1.820e-140
Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0
Query:    1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAPDADLLGAAPTSFESSSFAADSPSVEMPKESFSPKQAVASPVSPPRPTAPSPTXXXXXXXXXXXXXXXXSKAVSTDAPAAPAAEEPTEDTAAXXXXXXXXXXXXXXXXXXXXXXPAAAPAVGLVSEEERRKARAARFGVPPAAEVQPTAEXXXXXXXXXXXXXSATASGAAPAAXXXXXXXXXXXXXXSESLLSGDKLIQRAERFNLSTPQSEEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPQGEEAXXXXXRAERFAGAGAADKAAAPAAAKGSHKQGARGRKAPADKGAALSSALSAGR 365
            MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAPDADLLGAAPTSFESSSFAADSPSVEMPKESFSPKQAVASPVSPPRPTAPSPTXXXXXXXXXXXXXXXXSKAVSTDAPAAPAAEEPTEDTAAXXXXXXXXXXXXXXXXXXXXXXPAAAPAVGLVSEEERRKARAARFGVPPAAEVQPTAEXXXXXXXXXXXXXSATASGAAPAAXXXXXXXXXXXXXXSESLLSGDKLIQRAERFNLSTPQSEEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPQGEEAXXXXXRAERFAGAGAADKAAAPAAAKGSHKQGARGRKAPADKGAALSSALSAGR
Sbjct:    1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAPDADLLGAAPTSFESSSFAADSPSVEMPKESFSPKQAVASPVSPPRPTAPSPTXXXXXXXXXXXXXXXXSKAVSTDAPAAPAAEEPTEDTAAXXXXXXXXXXXXXXXXXXXXXXPAAAPAVGLVSEEERRKARAARFGVPPAAEVQPTAEXXXXXXXXXXXXXSATASGAAPAAXXXXXXXXXXXXXXSESLLSGDKLIQRAERFNLSTPQSEEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKPQGEEAXXXXXRAERFAGAGAADKAAAPAAAKGSHKQGARGRKAPADKGAALSSALSAGR 365          
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: A0A7S3HLW8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLW8_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.450e-9
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 MSE-VNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAPDADLL 54
            MSE ++P+K+KV DLK ELAKRNLD+ GLK DL QRLQ ALD+EEFGL   AD+L
Sbjct:    6 MSEKLDPKKLKVQDLKDELAKRNLDTNGLKADLQQRLQTALDDEEFGLDDGADIL 60          
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: T0RQ52_SAPDV (SAP domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RQ52_SAPDV)

HSP 1 Score: 65.9 bits (159), Expect = 8.060e-9
Identity = 67/190 (35.26%), Postives = 90/190 (47.37%), Query Frame = 0
Query:    1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGL-APDADLLGAAPTSFESSSFAADSPS-VEMPKESFSPKQAVASPVSPPRPTAPSPTXXXXXXXXXXXXXXXXSKAVSTDAPAAPAAEEPTEDTAAXXXXXXXXXXXXXXXXXXXXXXPAAAPAVGLVSEEERRKARAARFGVP 188
            M+ VNP+KMKVA++K ELAKR L + G+K +L+QRL+ ALDEEEFG  A +   L AA    E+S   + +P  VE P +  +PK+A     SPP+   P P                    +  DAP                                     AAAP    ++EEE+RKARAA+FG+P
Sbjct:    1 MAIVNPKKMKVAEIKDELAKRGLSTVGVKAELVQRLELALDEEEFGSEAHEQATLAAA----EASPIGSATPEPVEEPAQE-APKEA-----SPPKHAEPVPE-------------------LVKDAPVV-----------------------------------AAAPVTVGMTEEEKRKARAAKFGIP 126          
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: K3X8E5_GLOUD (SAP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8E5_GLOUD)

HSP 1 Score: 65.1 bits (157), Expect = 2.450e-8
Identity = 99/262 (37.79%), Postives = 127/262 (48.47%), Query Frame = 0
Query:    6 PQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAPDADLLGAAPTSFESSSFAA--DSPSVEMPKESFSPKQAVASPVSPPRPTAPSPTXXXXXXXXXXXXXXXXSKAVSTDAPAAPAAE-EPTEDTAAXXXXXXXXXXXXXXXXXXXXXXPAAAPAVGLVSEEERRKARAARFGVPPAAEVQPTAEXXXXXXXXXXXXXSATASGAAPAAXXXXXXXXXXXXXXSESLLSGDKLIQRAERFNLSTPQSEEAK 264
            P+KMKV++L+A L  R L S GLK +LIQRL+ ALDEEEFG A   ++   AP S +++   A  ++PS   P  S SPK+   +P            XXXXXXXXXXXXXXXX  A S     APA E  P  D+ +                           AV  ++EEE+RKARAA+FG+P   E             X  XXX      AAPAA                     +K ++RAERFNL TP++ + K
Sbjct:    7 PKKMKVSELRAALESRGLSSNGLKSELIQRLELALDEEEFGSAAQ-EMEDLAPPSEDAAKAEAAPEAPSPAAPAVSTSPKKQATTPKKKEADAXXXXXXXXXXXXXXXXXXXXXXPADSVGKKDAPAKEVTPEADSGS---------------------------AVQPLTEEEKRKARAAKFGIPLKHE------------DXLSXXXKRFNIAAAPAALTDEDR---------------EKKLKRAERFNLETPETLDLK 213          
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: A0A6H5KM35_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM35_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 2.730e-8
Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFG 46
            MSE+N  K+KV++LKAELA R+LD  G K DL QRLQAALDEEEFG
Sbjct:    1 MSEINVSKLKVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFG 46          
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: A0A5D6XL70_9STRA (SAP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL70_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 3.170e-8
Identity = 94/262 (35.88%), Postives = 119/262 (45.42%), Query Frame = 0
Query:    6 PQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAPDADLLGAAPTSFESSSFAADSPSVEMPKESFSPKQAVASPVSPPRPTAPSPTXXXXXXXXXXXXXXXX---SKAVSTDAPAAPAAEEPTEDTAAXXXXXXXXXXXXXXXXXXXXXXPAAAPAVGLVSEEERRKARAARFGVPPAAEVQPTAEXXXXXXXXXXXXXSATASGAAPAAXXXXXXXXXXXXXXSESLLSGDKLIQRAERFNLSTPQSEEAK 264
            P+KMKV++L+A L  R L S GLK +LIQRL+ ALDEEEFG   DA  L A     + +  AA  P  E             S VSP +    +P XXXXXXXXXXXXX      +KA +T+ P APA  +P +                            A  A   ++EEE+RKARAA++G+P   E     E             +ATA  AA                 + S     K +QRAERFNL T  + E K
Sbjct:    5 PKKMKVSELRAALESRGLSSNGLKSELIQRLELALDEEEFG--SDAQDLEALAPPKDDAKAAAALPHAE-------------STVSPTKQAKKAPEXXXXXXXXXXXXXAETHQSTKATATE-PDAPAVVKPADKAPEDV---------------------TAGDAPKALTEEEKRKARAAKYGIP-LKEEDKKVERAKRFNVSGGTGAAATAGAAA-----------------APSEEERAKKLQRAERFNLETADTLEKK 211          
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: A0A7S3LF45_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LF45_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 6.990e-8
Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGL 47
            MSEV+ +KMKV +LKAEL+KR L + GLK +L+ RLQA LDEEEFGL
Sbjct:    1 MSEVDIKKMKVTELKAELSKRGLSTDGLKAELVNRLQARLDEEEFGL 47          
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: A0A3M6VRU1_9STRA (SAP domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRU1_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 8.490e-8
Identity = 31/46 (67.39%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFG 46
            M+ VNP+KMKV++L+A L  RNL S GLK +LIQRL+ ALDEEEFG
Sbjct:    1 MTSVNPKKMKVSELRAALESRNLSSNGLKTELIQRLELALDEEEFG 46          
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: A0A6H5KS91_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS91_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.120e-7
Identity = 33/49 (67.35%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAP 49
            M E NP KMKVADLKAEL +R L  TGLK DL QRLQ A+D +EFG  P
Sbjct:    1 MDEKNPLKMKVADLKAELGRRGLSQTGLKFDLAQRLQTAMDVDEFGTLP 49          
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Match: D8LQH6_ECTSI (SAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH6_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 1.120e-7
Identity = 33/49 (67.35%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAP 49
            M E NP KMKVADLKAEL +R L  TGLK DL QRLQ A+D +EFG  P
Sbjct:    1 MDEKNPLKMKVADLKAELGRRGLSQTGLKFDLAQRLQTAMDVDEFGTLP 49          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348213 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z395_9STRA1.820e-140100.00SAP domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3HLW8_9STRA1.450e-969.09Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
T0RQ52_SAPDV8.060e-935.26SAP domain-containing protein n=2 Tax=Saprolegnia ... [more]
K3X8E5_GLOUD2.450e-837.79SAP domain-containing protein n=1 Tax=Globisporang... [more]
A0A6H5KM35_9PHAE2.730e-871.74SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A5D6XL70_9STRA3.170e-835.88SAP domain-containing protein n=1 Tax=Pythium bras... [more]
A0A7S3LF45_9STRA6.990e-868.09Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A3M6VRU1_9STRA8.490e-867.39SAP domain-containing protein n=1 Tax=Peronospora ... [more]
A0A6H5KS91_9PHAE1.120e-767.35SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQH6_ECTSI1.120e-767.35SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 260..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..323
NoneNo IPR availablePANTHERPTHR46551SAP DOMAIN-CONTAINING RIBONUCLEOPROTEINcoord: 1..323
IPR003034SAP domainSMARTSM00513sap_9coord: 6..40
e-value: 1.3E-11
score: 54.6
IPR003034SAP domainPFAMPF02037SAPcoord: 7..40
e-value: 1.7E-13
score: 50.0
IPR003034SAP domainPROSITEPS50800SAPcoord: 6..40
score: 9.3269
IPR040746THO1_MOS11, C-terminal domainPFAMPF18592Tho1_MOS11_Ccoord: 174..209
e-value: 5.0E-9
score: 36.0
IPR036361SAP domain superfamilyGENE3D1.10.720.30SAP domaincoord: 4..45
e-value: 2.6E-14
score: 54.6
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 5..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_21contigContig_21:122771..123868 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348213mRNA_7131Tribonema minus UTEX_B_3156 mRNAContig_21 122771..123868 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348213|estExt_Genemark1.C_Ctg_210013 ID=Trimin1|348213|estExt_Genemark1.C_Ctg_210013|Name=jgi.p|Trimin1|348213|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=366bp
MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAPD
ADLLGAAPTSFESSSFAADSPSVEMPKESFSPKQAVASPVSPPRPTAPSP
TPALAAPPSPAVATAAPSKAVSTDAPAAPAAEEPTEDTAAAPAAPDAEEA
TAKSAAQAPAPTPAAAPAVGLVSEEERRKARAARFGVPPAAEVQPTAEEK
LAQRAKRFGVPSATASGAAPAAAAAPAASAPASAAPSESLLSGDKLIQRA
ERFNLSTPQSEEAKKRKRIEEDEAKKKRRLERFGGSSGGGGSGGSSGGGG
GGGAKPQGEEAAKRQKRAERFAGAGAADKAAAPAAAKGSHKQGARGRKAP
ADKGAALSSALSAGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR040746THO1_MOS11_C
IPR036361SAP_dom_sf