mRNA_6733 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|80238
Unique NamemRNA_6733
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A835YNG4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNG4_9STRA)

HSP 1 Score: 549 bits (1414), Expect = 1.140e-196
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1
Query:    1 CSSTSWVALRRAQWRGSVGGVVSPRSIADGEYMDLSEVTRNNCNGVAPLRRTTSPEELFLGNSRTSELKTSEHHGSQTFLQEPATQQDSKLLSSLSNILIDAPGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDMPLVSQ 825
            CSSTSWVALRRAQWRGSVGGVVSPRSIADGEYMDLSEVTRNNCNGVAPLRRTTSPEELFLGNSRTSELKTSEHHGSQTFLQEPATQQDSKLLSSLSNILIDAPGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDMPLVSQ
Sbjct:    1 CSSTSWVALRRAQWRGSVGGVVSPRSIADGEYMDLSEVTRNNCNGVAPLRRTTSPEELFLGNSRTSELKTSEHHGSQTFLQEPATQQDSKLLSSLSNILIDAPGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDMPLVSQ 275          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A6H5KZ28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ28_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 6.040e-36
Identity = 79/160 (49.38%), Postives = 101/160 (63.12%), Query Frame = 1
Query:  355 ILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQH-----QPSPSSQTDTGASP---TSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 810
            ++  F  +ERVVLTAN NLQR+ISSYYN+PV V +  C   G  VY+R V +SV G  FC AKS+VV+H  AC EAV+T  VG+GQLF  L+ LP F LL+ G+      + S +S T  G      T    G WR+YDL S H+SCRI E+F  +LF +
Sbjct:  168 LIGHFDALERVVLTANANLQRVISSYYNSPVTVDVIFCTEVGPGVYDREVEISVLGHVFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRSARFSGNSDTIGGEKEGVCTRDDGGFWRLYDLRSGHVSCRIYEEFPPDLFGL 327          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: L8HDT3_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDT3_ACACA)

HSP 1 Score: 128 bits (322), Expect = 2.600e-32
Identity = 72/169 (42.60%), Postives = 100/169 (59.17%), Query Frame = 1
Query:  307 PGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGE-HVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 810
            P HFGDI+     +  + A FT +ER+VL+ANGNLQR++S+YYN+PV V I + DR G+  ++ER V L+  G  FC AKS V +  +  +  V  + VGIGQLF HL  LP+F LL  G+           G S       +WR Y LE+  + C I+E+F  +LFD+
Sbjct:   49 PNHFGDILAPREITTVLPAGFTGLERIVLSANGNLQRLMSAYYNSPVSVEIIKNDRVGQTSIFEREVNLTCFGKAFCNAKSTVTIKKEEHLRLVLEEKVGIGQLFFHLRLLPSFVLLQAGR---------SGGVS-------LWREYRLEADSIVCEIREEFVADLFDL 201          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A813DD16_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DD16_POLGL)

HSP 1 Score: 131 bits (329), Expect = 1.360e-31
Identity = 81/187 (43.32%), Postives = 108/187 (57.75%), Query Frame = 1
Query:  307 PGHFGDIMGGEPASPAI----LARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQ-HQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDM-PLVSQ*WSQTTLV 849
            PG  GDIMG     P +    L  F+P++R VL ANGNLQRI+SSY+++PV V +    R+    YER V LSV G  F    S VVL ++ CI A+E   VGIGQLFRHL+ +PAF+LL  GQ    +  S T +G     S +  WR Y L    + C I+E    +LF++ P +S   SQ++ V
Sbjct:   32 PG-LGDIMGSATVEPPVDLPSLDTFSPLQRTVLFANGNLQRILSSYHDSPVTVTVRFNRRKAHGSYEREVDLSVFGCIFAVCTSSVVLTTEECIRAIEVDGVGIGQLFRHLNIMPAFSLLQAGQLAAAAEESPTTSGPQALDSEARFWREYQLSGLGVQCTIREVLRSDLFELRPAISTEASQSSAV 217          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A507D5L9_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D5L9_9FUNG)

HSP 1 Score: 121 bits (303), Expect = 6.210e-30
Identity = 70/172 (40.70%), Postives = 96/172 (55.81%), Query Frame = 1
Query:  307 PGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEH----VYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 810
            PGH GD+M       ++   FTP++RV+LTANGN+QRIISSYYNAPV V I    ++        ++R V + V     C A S V +++   +  VE   VGIGQLFR+L+ LP FTL+ VG+         D G +    + G WR Y L      C I E+F DN+F++
Sbjct:   12 PGHLGDLMSATETFLSLPDLFTPLQRVLLTANGNVQRIISSYYNAPVTVDILLNHKESSTPACTTFKRSVNIIVKNHVCCRAVSTVHIYNVEVLRLVEQDCVGIGQLFRYLNILPEFTLVDVGR---------DDGVA--GDVGGFWRHYILSGNGFKCHIHERFPDNVFNL 172          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A7S4QHH5_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QHH5_9DINO)

HSP 1 Score: 125 bits (313), Expect = 2.840e-29
Identity = 83/208 (39.90%), Postives = 109/208 (52.40%), Query Frame = 1
Query:  238 LQEPATQQDSKLLSSLSNIL---IDAPGHFGDIMG------------GEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPS--SQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 810
            L +P   Q +   SS S +    +DA G  GDIMG            G+P  P+ L  FTP++RV LTANGNLQR++SSYY+APV V IH   R     YER V L V    F    S V L  + C+ A+E + + IGQLFRH D LP F L   G   P P+  ++T+ G + +      WR Y L +  + C I E    +LFD+
Sbjct:   18 LADPPAMQKAAARSSSSPLWESPLDALGGLGDIMGRPAADGGARAAGGQPHMPS-LELFTPLQRVALTANGNLQRLVSSYYSAPVHVPIHYNRRVERGRYERQVDLVVHDTVFARCTSTVRLAREDCMRAIEEEGISIGQLFRHFDVLPEFELREYGFLPPPPAEAARTEAGDAFSCVARRFWRRYALWAGGIECDIYEDLRCDLFDL 224          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A507CLZ7_9FUNG (HHH_8 domain-containing protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CLZ7_9FUNG)

HSP 1 Score: 120 bits (302), Expect = 4.350e-28
Identity = 73/182 (40.11%), Postives = 101/182 (55.49%), Query Frame = 1
Query:  307 PGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEH----VYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDMP-LVSQ*WSQ 837
            PGH GD+M       ++   FTP++RV+LTANGN+QRIISSYYNAPV V I    ++        ++R V + V     C A S V +++   +  VE   VGIGQLFR+L+ LP FTL+ VG+         D G +    + G WR Y L      C I E+F DN F +  L+++ WS+
Sbjct:   12 PGHLGDLMSATETFLSLPDLFTPLQRVLLTANGNVQRIISSYYNAPVTVDILLNHKESSTPACTTFKRSVNIIVKNHVCCRAVSTVHIYNVEVLRLVEQDCVGIGQLFRYLNILPEFTLVDVGR---------DDGVA--GDVGGFWRHYILSGNGFKCHIHERFPDNWFRLLILLTRLWSE 182          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A1Z5JUV1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUV1_FISSO)

HSP 1 Score: 116 bits (290), Expect = 4.530e-28
Identity = 68/171 (39.77%), Postives = 99/171 (57.89%), Query Frame = 1
Query:  316 FGDIMGGEPASPAILARF----TPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEH--VYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 810
            F D + G   +   LA       P++R+VLTANGNLQR+I+SYY+A V V +  C  + E+  V++R V L V GV+FC A+S V +  D+C E V +  VG+GQLFR+L+ LP F L              + G  P +   GIWR Y L+   L+C+I+E+F   L+++
Sbjct:   10 FVDALTGTSGNATTLATAFGLTNPLDRLVLTANGNLQRLIASYYDADVSVRVEGCSFRQENPRVWDRTVYLEVLGVEFCRAESEVTIQQDSCQELVASGQVGLGQLFRYLNVLPMFFL-------------REAGVDPITG--GIWREYTLQCDALTCQIREEFIPGLWEL 165          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A507ECC0_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507ECC0_9FUNG)

HSP 1 Score: 116 bits (290), Expect = 9.420e-28
Identity = 69/191 (36.13%), Postives = 100/191 (52.36%), Query Frame = 1
Query:  253 TQQDSKLLSSLSNILIDAPGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGE-----HVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 810
            T  DSK  S+++    D P HFGDIM     S  I   +TP+ER++LTANGN+QRI+S+Y+NA V V I + +          ++ R V L + G   C A S V++  +  +  +  + VGIGQLFR+L+ LP F L  VG+                   +G WR Y L S  + C I E F  ++F++
Sbjct:   16 TTPDSKSCSTVTGA--DPPPHFGDIMSSRETSVLIPEGYTPLERILLTANGNVQRILSAYHNAKVTVEILKNELASSLDDVPAIFHRKVLLIIKGKTCCTANSTVIIRDEKYLRLLVDQHVGIGQLFRYLNILPEFALTKVGRDPAG---------------NGFWRKYTLSSPGIVCEIHEDFPPHVFEL 189          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: B8C1D0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1D0_THAPS)

HSP 1 Score: 119 bits (297), Expect = 1.780e-27
Identity = 85/255 (33.33%), Postives = 118/255 (46.27%), Query Frame = 1
Query:  223 GSQTFLQEPATQQDSKLLSSLSNILID--APGHFGDIMGGE--------PASP---------------AILARF----TPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDR-----------------------------QGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQ----HQPSPSS----QTDTGASPTSSISGIWRIYDLESKHLSCRIQEKF 789
            G +T         D+    ++ N  ID    G  GDIM G+        PA+P                + ARF    TPMER+ LTANGNLQRI SS+Y+APV VH+  C R                             +G+ V++R+V L V    FC A S++ + S  CI  +E  +VG+GQLFR+L+ LP F+LL  G+    H  S  S     +     P     G+WR Y+L+ + L+C I E+F
Sbjct:   60 GKETLTVNATLNGDTTFTETIDNDEIDIVGAGTLGDIMAGDSVSGNLEMPANPNPTTVKDGLVTKEGGELNARFNCNFTPMERIALTANGNLQRIFSSFYDAPVHVHVDSCARRELSARDEIQIGFTDANGFSTEKYRTHIDEGDAVWDRVVHLYVHDKTFCRATSVIHVRSHECIRLIEDGTVGLGQLFRYLNKLPTFSLLDAGRTEYAHAESEQSISKNDSKQALQPHEFEGGMWRTYELQCEELTCLIHEEF 314          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YNG4_9STRA1.140e-196100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A6H5KZ28_9PHAE6.040e-3649.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
L8HDT3_ACACA2.600e-3242.60Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
A0A813DD16_POLGL1.360e-3143.32Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A507D5L9_9FUNG6.210e-3040.70Uncharacterized protein n=1 Tax=Synchytrium endobi... [more]
A0A7S4QHH5_9DINO2.840e-2939.90Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A507CLZ7_9FUNG4.350e-2840.11HHH_8 domain-containing protein n=2 Tax=Synchytriu... [more]
A0A1Z5JUV1_FISSO4.530e-2839.77Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A507ECC0_9FUNG9.420e-2836.13Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
B8C1D0_THAPS1.780e-2733.33Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_60contigContig_60:21902..24767 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|80238|CE80237_50
Max annot lvl2836|Bacillariophyta
EggNOG OGs2DIV6@1|root,2RWUQ@2759|Eukaryota,2XDTI@2836|Bacillariophyta
Evalue1.04e-28
Seed ortholog35128.Thaps4256
Hectar predicted targeting categorymitochondrion
TranscriptId80560
TrackFilteredModels1
ProteinId80238
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|80238gene_6733Tribonema minus UTEX_B_3156 geneContig_60 21902..24767 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6733_3exon_6733_3Tribonema minus UTEX_B_3156 exonContig_60 21902..22264 -
exon_6733_2exon_6733_2Tribonema minus UTEX_B_3156 exonContig_60 23023..23191 -
exon_6733_1exon_6733_1Tribonema minus UTEX_B_3156 exonContig_60 24343..24767 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_6733UTR3_6733Tribonema minus UTEX_B_3156 three_prime_UTRContig_60 21902..22030 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6733CDS_6733Tribonema minus UTEX_B_3156 CDSContig_60 24343..24767 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|80238Trimin1|80238|CE80237_50Tribonema minus UTEX_B_3156 polypeptideContig_60 22031..24767 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6733 ID=mRNA_6733|Name=jgi.p|Trimin1|80238|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=957bp|location=Sequence derived from alignment at Contig_60:21902..24767- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TGTAGCAGCACGTCATGGGTTGCACTGAGACGAGCACAGTGGCGGGGCTC
TGTCGGTGGGGTCGTATCACCAAGGAGCATAGCAGATGGCGAGTACATGG
ATCTATCAGAGGTGACCAGAAATAACTGTAATGGAGTAGCTCCGCTACGG
CGAACTACGTCGCCGGAGGAGTTGTTCCTTGGCAATTCACGGACCAGTGA
ACTCAAGACCTCAGAGCACCATGGTAGCCAGACTTTTTTGCAGGAACCGG
CGACACAACAAGACTCCAAATTACTATCATCCCTGTCGAACATACTCATT
GACGCACCGGGGCACTTTGGCGATATCATGGGCGGTGAACCTGCCAGCCC
TGCTATACTGGCGCGCTTCACGCCTATGGAGAGGGTGGTGCTGACTGCCA
ATGGCAATTTGCAACGCATTATCAGCTCCTACTACAACGCACCGGTGGAT
GTCCACATACACCAGTGTGACCGCCAAGGCGAGCATGTGTATGAGAGGCT
GGTGACTCTGAGCGTTGGTGGCGTGCAGTTTTGTGAGGCCAAGAGCATCG
TCGTGCTGCACAGCGACGCCTGTATAGAAGCCGTCGAAACCAAGTCTGTA
GGTATTGGGCAGCTGTTCCGCCATTTGGACACCCTGCCAGCCTTCACGTT
GCTGAGCGTTGGGCAGCACCAGCCATCACCATCATCACAAACAGACACAG
GAGCGTCACCAACCAGCAGCATAAGTGGGATCTGGCGCATCTATGACCTG
GAGAGCAAGCACCTGAGCTGCCGCATCCAGGAGAAATTTGCCGATAACCT
GTTTGACATGCCCCTGGTGTCGCAATAGTGGTCGCAGACAACCCTTGTGC
AGGCCGTCAATGTTGCAATGTGTGGCAACATGCTCTCAGTCCCAGCGGGA
CACAATTTTGCGCATCACAGTGTACAGATTGGCAACTGTAAATACCCCTT
GACTTGC
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protein sequence of jgi.p|Trimin1|80238

>Trimin1|80238|CE80237_50 ID=Trimin1|80238|CE80237_50|Name=jgi.p|Trimin1|80238|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=276bp
CSSTSWVALRRAQWRGSVGGVVSPRSIADGEYMDLSEVTRNNCNGVAPLR
RTTSPEELFLGNSRTSELKTSEHHGSQTFLQEPATQQDSKLLSSLSNILI
DAPGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVD
VHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSV
GIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDL
ESKHLSCRIQEKFADNLFDMPLVSQ*
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mRNA from alignment at Contig_60:21902..24767-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6733 ID=mRNA_6733|Name=jgi.p|Trimin1|80238|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2866bp|location=Sequence derived from alignment at Contig_60:21902..24767- (Tribonema minus UTEX_B_3156 )
TGTAGCAGCACGTCATGGGTTGCACTGAGACGAGCACAGTGGCGGGGCTC TGTCGGTGGGGTCGTATCACCAAGGAGCATAGCAGATGGCGAGTACATGG ATCTATCAGAGGTGACCAGAAATAACTGTAATGGAGTAGCTCCGCTACGG CGAACTACGTCGCCGGAGGAGTTGTTCCTTGGCAATTCACGGACCAGTGA ACTCAAGACCTCAGAGCACCATGGTAGCCAGACTTTTTTGCAGGAACCGG CGACACAACAAGACTCCAAATTACTATCATCCCTGTCGAACATACTCATT GACGCACCGGGGCACTTTGGCGATATCATGGGCGGTGAACCTGCCAGCCC TGCTATACTGGCGCGCTTCACGCCTATGGAGAGGGTGGTGCTGACTGCCA ATGGCAATTTGCAACGCATTATCAGGTATGACTTCTGACTTCACAGTGCA ACAACCTATCACAGTGAGCTGTGTCATTGCGAGTTGTGTGGTGCGCTCGT CTGCCAAGACCGGCTAGCACAGGCAGGGTGTAGTGTTTGCTGTGCATCAT CACGTCAGCGTTGCATTGCAGCAGACGTTTAATGCACGGCAAACACCTAA GTGCCTCAAGAGCTCATGAAATTCATGACATGAGAGTTTCCATGTTCTCG TTCTAGGCCGCTCATGGTGACTCGCAAGTACTGCCCAAGAATGAAACTGG AGCATCGCCGGCGTTCAGTGTGTAGCTCATTGATCGTCATATGCCTCTTG AAGGCGCAAGAGACTCGCCTAGTCTGGTCGTTCAGGCTGTTTGTAGCAAA GCGACTGTTACTACCTCAAACGCTGAGGTGAGAGCAACGGCGCGGTTTTA GGTGCATTCAGCTGTGACTGCCATACCATCAAGGCTGCCTCACTGATGCG TAAACACGCGCACACTCAAACCTGGAGAATGGCGTCACCGTGTCATCCAT CAGCTGCTGAGTTGGACAGTGGATGGCACCTATTGCAAGCGGCGTTTCAA GTTGTAAAGTACCATCTGTCAACTTCAAGCTTTCTAGGTGCTGCCATCTG CATCCTGAGCTGGCCCGTGCACCCCAATGCTGGAGCAATATCTTGTTAGG TCCACATGTCTTGTTAGGTCCACATGATCAGCGGCATAACTGCTGTTGCT TAGAGTTGGGCTCACAGGGGCTGGCATTCATTTGTTGGTATGGCACCTGC GTAATCACTCTTTATGTCACACAAAACCTGCTGGGCATCTGCTTAGCGGA AGTGTGGCATGTGTACTGCACCACCAAACACATATGAATGAAAACGAATC AAAAGATCGTAGAGCTCTAGGTGACAAGGGATGGTTAGCCTTAAGTGCCT TCCACCAATAACCGTGGTCGCCGCTACATGTGTTCGTGTGCAATCATTGT CACAACATTTTCTTCACGCATCATGAAGAAACAAACCAGTTTGTTCTCCC AGGCAACCGGACAACTGCGATAAAACGCCTCTATACAGTGCCTGAGAACA CACGAGCCGATGTTCCACAATTACTCTGGCACTGGCTAACTTTGTCTTTT TGTGCATCGCACTGCACCCGCCCCAGCTCCTACTACAACGCACCGGTGGA TGTCCACATACACCAGTGTGACCGCCAAGGCGAGCATGTGTATGAGAGGC TGGTGACTCTGAGCGTTGGTGGCGTGCAGTTTTGTGAGGCCAAGAGCATC GTCGTGCTGCACAGCGACGCCTGTATAGAAGCCGTCGAAACCAAGGTAAG ATGATGTGCAATCAAAGCAGTAACTGCTCAGCACTCGTGGACAACCGCGT CTTGGTGCGTGCTTGTTGTATTACACAATGTAACTCTTGATGAGCATGGG TGACTCAATGTTGTCAGTGGTCAAGTGGTAAATCCGGTTTGCCGGAGGCA TGCAGAATTGCTGCGTCGCCCATTGCGTGACGCGTGTTCGAGCGCATTTG TGACAGAGCATTGCACAGAAACAACAAAAACAGTCTGCATTTCAATGCAT GTGTCAAATGCTGTCATTGCTGCATTCGCAAAAAGAGCTCTCCTAGGTTT CCAGCCTCCCTGCTTTCGCTGTATCTGACTTGTATGCCTGAGCAATTAAA AAATCAATGTCAACGTCGAATCGTTTTCTCGAACGGCATCTTCTGCTGCA TCCAGTACATGACGCTTTGCGGCCACCTTGTGCCCCCCTGACGTTCATGA CATGTCATGACGTGCTCGGATTGTCGCTTCTGCCTCTGTCTGCATGTGTA CTTCAAACCCAAACGCTGTGCACCGCACTGCTGGCCCTTCGTTGGCAACC AGCGTCGACATGAGATACCTGAGAAAACTTGTTATTACCTTGCTGAGCAG ATGTTAGTTCCCCTTTCTTTGTAGATCCAACTTGACCATCTTGGATAGGT TTTGCGTGACAGGCCTACCACAGGCATTTTGTTGAAGTTGATCACAGCAT GCAAATGACACTTACAAACAAGCTTACGCTGTTTCCGTGGTGGGTGTACG CAGTCTGTAGGTATTGGGCAGCTGTTCCGCCATTTGGACACCCTGCCAGC CTTCACGTTGCTGAGCGTTGGGCAGCACCAGCCATCACCATCATCACAAA CAGACACAGGAGCGTCACCAACCAGCAGCATAAGTGGGATCTGGCGCATC TATGACCTGGAGAGCAAGCACCTGAGCTGCCGCATCCAGGAGAAATTTGC CGATAACCTGTTTGACATGCCCCTGGTGTCGCAATAGTGGTCGCAGACAA CCCTTGTGCAGGCCGTCAATGTTGCAATGTGTGGCAACATGCTCTCAGTC CCAGCGGGACACAATTTTGCGCATCACAGTGTACAGATTGGCAACTGTAA ATACCCCTTGACTTGC
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Coding sequence (CDS) from alignment at Contig_60:21902..24767-

>mRNA_6733 ID=mRNA_6733|Name=jgi.p|Trimin1|80238|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=828bp|location=Sequence derived from alignment at Contig_60:21902..24767- (Tribonema minus UTEX_B_3156 )
TGTAGCAGCACGTCATGGGTTGCACTGAGACGAGCACAGTGGCGGGGCTC
TGTCGGTGGGGTCGTATCACCAAGGAGCATAGCAGATGGCGAGTACATGG
ATCTATCAGAGGTGACCAGAAATAACTGTAATGGAGTAGCTCCGCTACGG
CGAACTACGTCGCCGGAGGAGTTGTTCCTTGGCAATTCACGGACCAGTGA
ACTCAAGACCTCAGAGCACCATGGTAGCCAGACTTTTTTGCAGGAACCGG
CGACACAACAAGACTCCAAATTACTATCATCCCTGTCGAACATACTCATT
GACGCACCGGGGCACTTTGGCGATATCATGGGCGGTGAACCTGCCAGCCC
TGCTATACTGGCGCGCTTCACGCCTATGGAGAGGGTGGTGCTGACTGCCA
ATGGCAATTTGCAACGCATTATCAGCTCCTACTACAACGCACCGGTGGAT
GTCCACATACACCAGTGTGACCGCCAAGGCGAGCATGTGTATGAGAGGCT
GGTGACTCTGAGCGTTGGTGGCGTGCAGTTTTGTGAGGCCAAGAGCATCG
TCGTGCTGCACAGCGACGCCTGTATAGAAGCCGTCGAAACCAAGTCTGTA
GGTATTGGGCAGCTGTTCCGCCATTTGGACACCCTGCCAGCCTTCACGTT
GCTGAGCGTTGGGCAGCACCAGCCATCACCATCATCACAAACAGACACAG
GAGCGTCACCAACCAGCAGCATAAGTGGGATCTGGCGCATCTATGACCTG
GAGAGCAAGCACCTGAGCTGCCGCATCCAGGAGAAATTTGCCGATAACCT
GTTTGACATGCCCCTGGTGTCGCAATAG
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