Trimin1|80238|CE80237_50 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|80238
Unique NameTrimin1|80238|CE80237_50
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length276
Homology
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A835YNG4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNG4_9STRA)

HSP 1 Score: 549 bits (1415), Expect = 1.420e-197
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
Query:    1 CSSTSWVALRRAQWRGSVGGVVSPRSIADGEYMDLSEVTRNNCNGVAPLRRTTSPEELFLGNSRTSELKTSEHHGSQTFLQEPATQQDSKLLSSLSNILIDAPGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDMPLVSQ 275
            CSSTSWVALRRAQWRGSVGGVVSPRSIADGEYMDLSEVTRNNCNGVAPLRRTTSPEELFLGNSRTSELKTSEHHGSQTFLQEPATQQDSKLLSSLSNILIDAPGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDMPLVSQ
Sbjct:    1 CSSTSWVALRRAQWRGSVGGVVSPRSIADGEYMDLSEVTRNNCNGVAPLRRTTSPEELFLGNSRTSELKTSEHHGSQTFLQEPATQQDSKLLSSLSNILIDAPGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDMPLVSQ 275          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A6H5KZ28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ28_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 1.870e-36
Identity = 79/160 (49.38%), Postives = 101/160 (63.12%), Query Frame = 0
Query:  119 ILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQH-----QPSPSSQTDTGASP---TSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 270
            ++  F  +ERVVLTAN NLQR+ISSYYN+PV V +  C   G  VY+R V +SV G  FC AKS+VV+H  AC EAV+T  VG+GQLF  L+ LP F LL+ G+      + S +S T  G      T    G WR+YDL S H+SCRI E+F  +LF +
Sbjct:  168 LIGHFDALERVVLTANANLQRVISSYYNSPVTVDVIFCTEVGPGVYDREVEISVLGHVFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRSARFSGNSDTIGGEKEGVCTRDDGGFWRLYDLRSGHVSCRIYEEFPPDLFGL 327          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: L8HDT3_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDT3_ACACA)

HSP 1 Score: 128 bits (322), Expect = 8.690e-33
Identity = 72/169 (42.60%), Postives = 100/169 (59.17%), Query Frame = 0
Query:  103 PGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGE-HVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 270
            P HFGDI+     +  + A FT +ER+VL+ANGNLQR++S+YYN+PV V I + DR G+  ++ER V L+  G  FC AKS V +  +  +  V  + VGIGQLF HL  LP+F LL  G+           G S       +WR Y LE+  + C I+E+F  +LFD+
Sbjct:   49 PNHFGDILAPREITTVLPAGFTGLERIVLSANGNLQRLMSAYYNSPVSVEIIKNDRVGQTSIFEREVNLTCFGKAFCNAKSTVTIKKEEHLRLVLEEKVGIGQLFFHLRLLPSFVLLQAGR---------SGGVS-------LWREYRLEADSIVCEIREEFVADLFDL 201          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A813DD16_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DD16_POLGL)

HSP 1 Score: 129 bits (324), Expect = 2.340e-31
Identity = 78/178 (43.82%), Postives = 103/178 (57.87%), Query Frame = 0
Query:  103 PGHFGDIMGGEPASPAI----LARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQ-HQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDM-PLVS 274
            PG  GDIMG     P +    L  F+P++R VL ANGNLQRI+SSY+++PV V +    R+    YER V LSV G  F    S VVL ++ CI A+E   VGIGQLFRHL+ +PAF+LL  GQ    +  S T +G     S +  WR Y L    + C I+E    +LF++ P +S
Sbjct:   32 PG-LGDIMGSATVEPPVDLPSLDTFSPLQRTVLFANGNLQRILSSYHDSPVTVTVRFNRRKAHGSYEREVDLSVFGCIFAVCTSSVVLTTEECIRAIEVDGVGIGQLFRHLNIMPAFSLLQAGQLAAAAEESPTTSGPQALDSEARFWREYQLSGLGVQCTIREVLRSDLFELRPAIS 208          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A507D5L9_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507D5L9_9FUNG)

HSP 1 Score: 121 bits (303), Expect = 2.180e-30
Identity = 70/172 (40.70%), Postives = 96/172 (55.81%), Query Frame = 0
Query:  103 PGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEH----VYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 270
            PGH GD+M       ++   FTP++RV+LTANGN+QRIISSYYNAPV V I    ++        ++R V + V     C A S V +++   +  VE   VGIGQLFR+L+ LP FTL+ VG+         D G +    + G WR Y L      C I E+F DN+F++
Sbjct:   12 PGHLGDLMSATETFLSLPDLFTPLQRVLLTANGNVQRIISSYYNAPVTVDILLNHKESSTPACTTFKRSVNIIVKNHVCCRAVSTVHIYNVEVLRLVEQDCVGIGQLFRYLNILPEFTLVDVGR---------DDGVA--GDVGGFWRHYILSGNGFKCHIHERFPDNVFNL 172          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A7S4QHH5_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QHH5_9DINO)

HSP 1 Score: 125 bits (313), Expect = 9.700e-30
Identity = 83/208 (39.90%), Postives = 109/208 (52.40%), Query Frame = 0
Query:   80 LQEPATQQDSKLLSSLSNIL---IDAPGHFGDIMG------------GEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPS--SQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 270
            L +P   Q +   SS S +    +DA G  GDIMG            G+P  P+ L  FTP++RV LTANGNLQR++SSYY+APV V IH   R     YER V L V    F    S V L  + C+ A+E + + IGQLFRH D LP F L   G   P P+  ++T+ G + +      WR Y L +  + C I E    +LFD+
Sbjct:   18 LADPPAMQKAAARSSSSPLWESPLDALGGLGDIMGRPAADGGARAAGGQPHMPS-LELFTPLQRVALTANGNLQRLVSSYYSAPVHVPIHYNRRVERGRYERQVDLVVHDTVFARCTSTVRLAREDCMRAIEEEGISIGQLFRHFDVLPEFELREYGFLPPPPAEAARTEAGDAFSCVARRFWRRYALWAGGIECDIYEDLRCDLFDL 224          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A1Z5JUV1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JUV1_FISSO)

HSP 1 Score: 116 bits (290), Expect = 1.650e-28
Identity = 68/171 (39.77%), Postives = 99/171 (57.89%), Query Frame = 0
Query:  106 FGDIMGGEPASPAILARF----TPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEH--VYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 270
            F D + G   +   LA       P++R+VLTANGNLQR+I+SYY+A V V +  C  + E+  V++R V L V GV+FC A+S V +  D+C E V +  VG+GQLFR+L+ LP F L              + G  P +   GIWR Y L+   L+C+I+E+F   L+++
Sbjct:   10 FVDALTGTSGNATTLATAFGLTNPLDRLVLTANGNLQRLIASYYDADVSVRVEGCSFRQENPRVWDRTVYLEVLGVEFCRAESEVTIQQDSCQELVASGQVGLGQLFRYLNVLPMFFL-------------REAGVDPITG--GIWREYTLQCDALTCQIREEFIPGLWEL 165          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A507ECC0_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507ECC0_9FUNG)

HSP 1 Score: 116 bits (290), Expect = 3.440e-28
Identity = 69/191 (36.13%), Postives = 100/191 (52.36%), Query Frame = 0
Query:   85 TQQDSKLLSSLSNILIDAPGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGE-----HVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 270
            T  DSK  S+++    D P HFGDIM     S  I   +TP+ER++LTANGN+QRI+S+Y+NA V V I + +          ++ R V L + G   C A S V++  +  +  +  + VGIGQLFR+L+ LP F L  VG+                   +G WR Y L S  + C I E F  ++F++
Sbjct:   16 TTPDSKSCSTVTGA--DPPPHFGDIMSSRETSVLIPEGYTPLERILLTANGNVQRILSAYHNAKVTVEILKNELASSLDDVPAIFHRKVLLIIKGKTCCTANSTVIIRDEKYLRLLVDQHVGIGQLFRYLNILPEFALTKVGRDPAG---------------NGFWRKYTLSSPGIVCEIHEDFPPHVFEL 189          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: A0A507CLZ7_9FUNG (HHH_8 domain-containing protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CLZ7_9FUNG)

HSP 1 Score: 119 bits (298), Expect = 5.780e-28
Identity = 70/175 (40.00%), Postives = 96/175 (54.86%), Query Frame = 0
Query:  103 PGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEH----VYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDMPLV 273
            PGH GD+M       ++   FTP++RV+LTANGN+QRIISSYYNAPV V I    ++        ++R V + V     C A S V +++   +  VE   VGIGQLFR+L+ LP FTL+ VG+         D G +    + G WR Y L      C I E+F DN F + ++
Sbjct:   12 PGHLGDLMSATETFLSLPDLFTPLQRVLLTANGNVQRIISSYYNAPVTVDILLNHKESSTPACTTFKRSVNIIVKNHVCCRAVSTVHIYNVEVLRLVEQDCVGIGQLFRYLNILPEFTLVDVGR---------DDGVA--GDVGGFWRHYILSGNGFKCHIHERFPDNWFRLLIL 175          
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Match: B8C1D0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1D0_THAPS)

HSP 1 Score: 119 bits (297), Expect = 6.350e-28
Identity = 85/255 (33.33%), Postives = 118/255 (46.27%), Query Frame = 0
Query:   75 GSQTFLQEPATQQDSKLLSSLSNILID--APGHFGDIMGGE--------PASP---------------AILARF----TPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDR-----------------------------QGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQ----HQPSPSS----QTDTGASPTSSISGIWRIYDLESKHLSCRIQEKF 263
            G +T         D+    ++ N  ID    G  GDIM G+        PA+P                + ARF    TPMER+ LTANGNLQRI SS+Y+APV VH+  C R                             +G+ V++R+V L V    FC A S++ + S  CI  +E  +VG+GQLFR+L+ LP F+LL  G+    H  S  S     +     P     G+WR Y+L+ + L+C I E+F
Sbjct:   60 GKETLTVNATLNGDTTFTETIDNDEIDIVGAGTLGDIMAGDSVSGNLEMPANPNPTTVKDGLVTKEGGELNARFNCNFTPMERIALTANGNLQRIFSSFYDAPVHVHVDSCARRELSARDEIQIGFTDANGFSTEKYRTHIDEGDAVWDRVVHLYVHDKTFCRATSVIHVRSHECIRLIEDGTVGLGQLFRYLNKLPTFSLLDAGRTEYAHAESEQSISKNDSKQALQPHEFEGGMWRTYELQCEELTCLIHEEF 314          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|80238 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YNG4_9STRA1.420e-197100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A6H5KZ28_9PHAE1.870e-3649.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
L8HDT3_ACACA8.690e-3342.60Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
A0A813DD16_POLGL2.340e-3143.82Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A507D5L9_9FUNG2.180e-3040.70Uncharacterized protein n=1 Tax=Synchytrium endobi... [more]
A0A7S4QHH5_9DINO9.700e-3039.90Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A1Z5JUV1_FISSO1.650e-2839.77Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A507ECC0_9FUNG3.440e-2836.13Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
A0A507CLZ7_9FUNG5.780e-2840.00HHH_8 domain-containing protein n=2 Tax=Synchytriu... [more]
B8C1D0_THAPS6.350e-2833.33Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028978Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamilyGENE3D3.40.1410.10coord: 122..272
e-value: 1.5E-11
score: 46.0
IPR028978Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamilySUPERFAMILY64288Chorismate lyase-likecoord: 124..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_60contigContig_60:22031..24767 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|80238mRNA_6733Tribonema minus UTEX_B_3156 mRNAContig_60 21902..24767 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|80238|CE80237_50 ID=Trimin1|80238|CE80237_50|Name=jgi.p|Trimin1|80238|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=276bp
CSSTSWVALRRAQWRGSVGGVVSPRSIADGEYMDLSEVTRNNCNGVAPLR
RTTSPEELFLGNSRTSELKTSEHHGSQTFLQEPATQQDSKLLSSLSNILI
DAPGHFGDIMGGEPASPAILARFTPMERVVLTANGNLQRIISSYYNAPVD
VHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSV
GIGQLFRHLDTLPAFTLLSVGQHQPSPSSQTDTGASPTSSISGIWRIYDL
ESKHLSCRIQEKFADNLFDMPLVSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028978Chorismate_lyase_/UTRA_dom_sf