mRNA_6693 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|144012
Unique NamemRNA_6693
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: A0A836CGI6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGI6_9STRA)

HSP 1 Score: 311 bits (798), Expect = 2.230e-107
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1
Query:    1 VPQVIDDAPWVVTDEFYFESGNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRIRVLAR 477
            VPQVIDDAPWVVTDEFYFESGNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRIRVLAR
Sbjct:    1 VPQVIDDAPWVVTDEFYFESGNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRIRVLAR 159          
BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: A0A835Z3L7_9STRA (Choline-phosphate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L7_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.610e-74
Identity = 131/170 (77.06%), Postives = 143/170 (84.12%), Query Frame = 1
Query:    1 VPQVIDDAPWVVTDEFY------------FESGNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRIRVLA 474
            V +V++DAPWVVTDEF                G+ASGV+DDGDVYAHL RAGRFVET RTEGISTSD I SI+Q   +Y+ FVRRNLRRGYSAKDMNVSFL++QAIKFGMVKERVAEN IGKLIKENSQAQALAED+QKAFVSVF+RDSAFRTRWRNQRKEIRNRI VLA
Sbjct:  207 VDEVVEDAPWVVTDEFLCAHSIDFVCHDALPYGDASGVSDDGDVYAHLKRAGRFVETRRTEGISTSDIITSIIQ---DYDEFVRRNLRRGYSAKDMNVSFLKEQAIKFGMVKERVAEN-IGKLIKENSQAQALAEDLQKAFVSVFNRDSAFRTRWRNQRKEIRNRIGVLA 372          
BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: A0A835Z8U6_9STRA (Choline-phosphate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U6_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.360e-54
Identity = 106/172 (61.63%), Postives = 120/172 (69.77%), Query Frame = 1
Query:    7 QVIDDAPWVVTDEFYFESG------------NASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPS--------------------HNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTR 426
            QV+ DAPWVVTDEF                 +ASGV+D+GDVYAHL RAGRFVET RTEGISTSD I SI+Q                       +Y+ FVRRNLRRGYS  DMNVS L++QAIKFGMVKERVAE+ IGKLIK+N QAQALAE++QKAFV VF+RDSAFRTR
Sbjct:    6 QVVKDAPWVVTDEFLRAHSIDFVCHDALPYIDASGVSDNGDVYAHLKRAGRFVETRRTEGISTSDIITSILQLGWQEAGAVRSGRLKALHCRLLQDYDKFVRRNLRRGYSINDMNVSCLKEQAIKFGMVKERVAES-IGKLIKKNPQAQALAENLQKAFVCVFNRDSAFRTR 176          
BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: A0A835Z6X4_9STRA (Choline-phosphate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6X4_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.250e-49
Identity = 98/180 (54.44%), Postives = 117/180 (65.00%), Query Frame = 1
Query:    7 QVIDDAPWVVTDEFY------------FESGNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQ------------PSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRIRVLA 474
            QV +DAPW VTDEF                 +AS V+D+G +Y HLNRAGRF+E  RTEGISTS + + ++             P  +Y+ FVRRN+ RGYSAKDMNVSFL++QAIKFG                EN QAQALAED+QKAFV++FDR+SAFRTRWRNQRK IRNRI VLA
Sbjct:   15 QVREDAPWAVTDEFLRAYSIDFVCHDALPYDHASSVSDNGGMYEHLNRAGRFIEMRRTEGISTSATSSPVLMNRLRRHSDAAGAPPTDYDEFVRRNVFRGYSAKDMNVSFLKEQAIKFGW---------------ENLQAQALAEDLQKAFVTLFDRESAFRTRWRNQRKAIRNRIGVLA 179          
BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: D8LPY9_ECTSI (Choline-phosphate cytidylyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPY9_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 4.830e-40
Identity = 91/215 (42.33%), Postives = 120/215 (55.81%), Query Frame = 1
Query:    1 VPQVIDDAPWVVTDEFY------------FESGNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQ--------------------------------------------AQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRIRVLAR 477
            V +V++DAPWVV ++F                G+ASG +  GDVYAHL R GRFVET RTEGISTSD I SI+Q   +Y+ FVRRN+ RGY+A+DMNV FL++QAIKF +VK++V    +GK+IK+  +                                            AQ    D+Q+ FV +FDRD A RT +R QR++IR R+ VLAR
Sbjct:  151 VDEVVEDAPWVVDEDFIAVHQIDFVCHDALPYGDASGQSSSGDVYAHLKRQGRFVETQRTEGISTSDIITSIIQ---DYDVFVRRNMERGYNARDMNVPFLKEQAIKFDIVKDKVTRR-VGKVIKDRQKKKTKQQAGGALITKGVKGRGXXXXGVDPNGNKERHNLVLDLGNHAQETITDMQRNFVQIFDRDGAIRTSFREQRRQIRERVNVLAR 361          
BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: H3GGV7_PHYRM (Choline-phosphate cytidylyltransferase n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3GGV7_PHYRM)

HSP 1 Score: 122 bits (305), Expect = 8.520e-31
Identity = 69/166 (41.57%), Postives = 105/166 (63.25%), Query Frame = 1
Query:    1 VPQVIDDAPWVVTDEFYFES------------GNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRI 462
            V +V++DAPWV++DEF  E              +ASG   +GDVYA +   G+F+ET RT+GISTSD I  I+     Y+ F+RRNL+RGYS KDMNV F+++++IKF M  ++V  +  G + K  S+A    +D+Q +F+ +F ++   RT +R +RK I+ R+
Sbjct:  136 VDEVVEDAPWVLSDEFLEEHQIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAE---YDTFIRRNLQRGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWISKA----DDMQHSFLELFSKEGRLRTSFRKRRKIIKERL 294          
BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: A0A5D6Y8Z6_9STRA (Choline-phosphate cytidylyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8Z6_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.290e-30
Identity = 68/166 (40.96%), Postives = 101/166 (60.84%), Query Frame = 1
Query:    1 VPQVIDDAPWVVTDEFYFESG------------NASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRI 462
            V +V++DAPWV+TD+F  +              +ASG   +GDVYA +   G+F+ET RT+GISTSD I  I+     Y+ F+RRNL RGY+ KDMNV F+++Q+IKF M  ++V  +  G       +    AED+Q  F+ +F R+   R+ +R QR++IR R+
Sbjct:  144 VDEVVEDAPWVITDDFLEQHAIDYVCHDALPYSDASGEAAEGDVYARIKAMGKFLETKRTDGISTSDLIIRIVAE---YDTFIRRNLARGYTGKDMNVPFMKEQSIKFDMAVDKVKHDVDGFF----HRLVGKAEDIQTGFLDLFRREGTLRSSFREQRQQIRRRL 302          
BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: K3WSJ0_GLOUD (Choline-phosphate cytidylyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSJ0_GLOUD)

HSP 1 Score: 121 bits (304), Expect = 1.990e-30
Identity = 69/166 (41.57%), Postives = 102/166 (61.45%), Query Frame = 1
Query:    1 VPQVIDDAPWVVTDEFYFESG------------NASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRI 462
            V +V++DAPWV+TDEF  +              +ASG   +GDVYA +   G+F+ET RT+GISTSD I  I+     Y+ F+RRNL RGY+ K+MNV F+++Q+IKF M  ++V  +  G + K   +A    ED+Q  F+ +F +D   RT +R +RK I+ R+
Sbjct:  162 VDEVVEDAPWVITDEFIEKHNIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETKRTDGISTSDLIIRIVAE---YDTFIRRNLARGYTGKEMNVPFMKEQSIKFDMAVDKVKHDVDGFVHKWVGKA----EDMQHGFLDLFSKDGRLRTSFRKRRKIIKERL 320          
BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: A0A8K1FT60_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FT60_PYTOL)

HSP 1 Score: 122 bits (306), Expect = 2.520e-30
Identity = 68/166 (40.96%), Postives = 106/166 (63.86%), Query Frame = 1
Query:    1 VPQVIDDAPWVVTDEFYFES------------GNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRI 462
            V +V++DAPWV+TDEF  +              ++SG + DGDVYA +   G+F+ET RT+GISTSD I  I+     Y+ F+RRNL+RGY+ KDMNV F+++Q+IKF M  ++V ++ +  L+ +       AED+Q +F+ +F ++   RT +R +RK I+ R+
Sbjct:  215 VDEVVEDAPWVLTDEFIEKHQIDYVCHDALPYSDSSGESSDGDVYARIKMMGKFLETKRTDGISTSDLIIRIIAE---YDTFIRRNLQRGYTGKDMNVPFMKEQSIKFDMAVDKV-KHDVDSLVHK---VLGKAEDMQHSFLDLFSKEGRLRTSFRKRRKIIKERL 373          
BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: F0WYF1_9STRA (Choline-phosphate cytidylyltransferase n=2 Tax=Albugo TaxID=65356 RepID=F0WYF1_9STRA)

HSP 1 Score: 120 bits (302), Expect = 3.370e-30
Identity = 69/171 (40.35%), Postives = 107/171 (62.57%), Query Frame = 1
Query:    1 VPQVIDDAPWVVTDEFYFESG------------NASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRIRVLAR 477
            V +VI+DAPWV+TDEF  +              + SG + DGDVY  + + G+F+ET RT+GISTSD I  I++    Y+ F+RRNL+RGY+ K+MNVS+L++Q+IKF M  ++V  +  G + K   +A    +++Q  F+ +F RD   RT  R +R+ ++ R+  +AR
Sbjct:  158 VDEVIEDAPWVITDEFLDKHAIDYVCHDSLPYSDTSGESSDGDVYDRIKKMGKFLETKRTDGISTSDLINRIIKE---YDTFIRRNLQRGYTGKEMNVSYLKEQSIKFDMAVDKVKHDVDGFIHKWVGKA----DELQYNFLDLFSRDGPLRTSLRKRRRILKERLTDIAR 321          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|144012 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CGI6_9STRA2.230e-107100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z3L7_9STRA1.610e-7477.06Choline-phosphate cytidylyltransferase n=1 Tax=Tri... [more]
A0A835Z8U6_9STRA1.360e-5461.63Choline-phosphate cytidylyltransferase n=1 Tax=Tri... [more]
A0A835Z6X4_9STRA1.250e-4954.44Choline-phosphate cytidylyltransferase n=1 Tax=Tri... [more]
D8LPY9_ECTSI4.830e-4042.33Choline-phosphate cytidylyltransferase n=2 Tax=Ect... [more]
H3GGV7_PHYRM8.520e-3141.57Choline-phosphate cytidylyltransferase n=20 Tax=Pe... [more]
A0A5D6Y8Z6_9STRA1.290e-3040.96Choline-phosphate cytidylyltransferase n=1 Tax=Pyt... [more]
K3WSJ0_GLOUD1.990e-3041.57Choline-phosphate cytidylyltransferase n=1 Tax=Glo... [more]
A0A8K1FT60_PYTOL2.520e-3040.96Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WYF1_9STRA3.370e-3040.35Choline-phosphate cytidylyltransferase n=2 Tax=Alb... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_25contigContig_25:862970..864562 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|144012|gw1.25.89.1
BRITEko00000,ko00001,ko00002,ko01000
KEGG rclassRC00002
KEGG ReactionR01890,R02590
KEGG ModuleM00090
KEGG Pathwayko00440,ko00564,ko01100,ko05231,map00440,map00564,map01100,map05231
KEGG koko:K00968
EC2.7.7.15
GOsGO:0000003,GO:0001541,GO:0001654,GO:0001736,GO:0001738,GO:0001745,GO:0002009,GO:0002165,GO:0003006,GO:0003674,GO:0003824,GO:0004105,GO:0005488,GO:0005515,GO:0005516,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0005789,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006656,GO:0006657,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0007163,GO:0007164,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007548,GO:0007552,GO:0007560,GO:0007568,GO:0008150,GO:0008152,GO:0008289,GO:0008340,GO:0008406,GO:0008585,GO:0008610,GO:0008654,GO:0009058,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010033,GO:0010243,GO:0010259,GO:0012505,GO:0016020,GO:0016192,GO:0016740,GO:0016772,GO:0016779,GO:0019637,GO:0019898,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0031210,GO:0031967,GO:0031975,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0042067,GO:0042175,GO:0042221,GO:0042587,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045017,GO:0045137,GO:0046470,GO:0046474,GO:0046486,GO:0046545,GO:0046660,GO:0046983,GO:0048232,GO:0048468,GO:0048477,GO:0048513,GO:0048563,GO:0048569,GO:0048592,GO:0048608,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048749,GO:0048856,GO:0048869,GO:0050896,GO:0050997,GO:0051179,GO:0051234,GO:0051704,GO:0060429,GO:0060562,GO:0061458,GO:0070405,GO:0070567,GO:0071704,GO:0071944,GO:0090407,GO:0090596,GO:0097164,GO:0098657,GO:0098827,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:1904116
Preferred namePCYT1A
Descriptioncholine-phosphate cytidylyltransferase activity
COG categoryIM
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0615@1|root,KOG2804@2759|Eukaryota
Evalue7.93e-41
Seed ortholog2880.D8LPY9
Hectar predicted targeting categoryother localisation
TranscriptId144334
TrackFilteredModels1
ProteinId144012
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|144012gene_6693Tribonema minus UTEX_B_3156 geneContig_25 862970..864562 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6693_1exon_6693_1Tribonema minus UTEX_B_3156 exonContig_25 862970..863155 +
exon_6693_2exon_6693_2Tribonema minus UTEX_B_3156 exonContig_25 863982..864120 +
exon_6693_3exon_6693_3Tribonema minus UTEX_B_3156 exonContig_25 864411..864562 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6693CDS_6693Tribonema minus UTEX_B_3156 CDSContig_25 862970..863155 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|144012Trimin1|144012|gw1.25.89.1Tribonema minus UTEX_B_3156 polypeptideContig_25 862970..864562 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6693 ID=mRNA_6693|Name=jgi.p|Trimin1|144012|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=477bp|location=Sequence derived from alignment at Contig_25:862970..864562+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTGCCGCAGGTCATTGACGATGCGCCGTGGGTCGTGACAGACGAGTTCTA
CTTCGAGTCCGGCAACGCGTCCGGCGTGAACGATGACGGCGACGTGTACG
CGCACCTCAATCGCGCGGGGCGCTTCGTTGAGACGTGCCGCACGGAGGGC
ATCTCCACCAGCGACAGCATTGCGTCCATCATGCAGCCGTCGCATAACTA
CAACGCATTTGTGCGTCGCAACCTGCGGCGTGGCTACTCTGCCAAGGACA
TGAACGTGAGCTTCCTCGAGCAGCAGGCCATCAAGTTTGGCATGGTCAAG
GAGCGCGTCGCAGAAAATACTATAGGCAAGCTCATCAAGGAGAACTCGCA
GGCGCAGGCACTCGCGGAGGACGTGCAGAAGGCCTTTGTGTCCGTCTTCG
ACCGCGACTCAGCGTTCCGCACGCGCTGGCGCAACCAGCGCAAGGAGATC
CGCAACAGGATCCGTGTGCTCGCCAGG
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protein sequence of jgi.p|Trimin1|144012

>Trimin1|144012|gw1.25.89.1 ID=Trimin1|144012|gw1.25.89.1|Name=jgi.p|Trimin1|144012|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=159bp
VPQVIDDAPWVVTDEFYFESGNASGVNDDGDVYAHLNRAGRFVETCRTEG
ISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVK
ERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEI
RNRIRVLAR
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mRNA from alignment at Contig_25:862970..864562+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6693 ID=mRNA_6693|Name=jgi.p|Trimin1|144012|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1593bp|location=Sequence derived from alignment at Contig_25:862970..864562+ (Tribonema minus UTEX_B_3156 )
GTGCCGCAGGTCATTGACGATGCGCCGTGGGTCGTGACAGACGAGTTCTA CTTCGAGTCCGGCAACGCGTCCGGCGTGAACGATGACGGCGACGTGTACG CGCACCTCAATCGCGCGGGGCGCTTCGTTGAGACGTGCCGCACGGAGGGC ATCTCCACCAGCGACAGCATTGCGTCCATCATGCAGGTGCGTGCGCACGC TGCCGCCGCCGCCGCCGCTGCCACTGCAGTTGCGGCCATTCGCTGCGCTG CGCCGTTGCAGCAGCGCTCAGACACAGGCCGCGTCACAGTGAAGCGCGTT CCATTAAGGAACATGCAAGTTGTGCCACCTTCGTTTCATCTTGTGTGTTT GCCACGCGGCGGGGGTGGCGAGATGCAGGCGTTGTGCGCAGGGTCAGGGT TGAGTTTAGGGTTAGGGTTAGGGTTAAGGCGGTCTCCGTGAGACCCTTAG ATGCCTCACTGAGGGCTAAAGTTAGGCTTGTCAGCTCGTGGCCGCACTCA TGGGGAACACGCTCCTGCCCTGCGTGTACCGTCAGAGCTGGTGACAGAAG ACGTCAGGAATGCAATCGCTTGGGTCACTCGCCACCACGAGACCTTCAAG ACCCCCCCGTCCCCTTTGTGCGCTGCCCCTTGATGCCTCAGGGCTACGCC GAGATAGTGTGGTGACTGCACGAATGCATTCATCAGAGCTGCGGTATAAT ACAGGATCAGTGTCGTGACGGCACGAAGAAAAATACCGGCTGCCAACTTT GTCAATGCATGTCCCTGCGGCCGTAATCTCTAGCCTCTACTAGGCAACCT CAAGAACACCAATGAGTGTGCGCCGCCGCCGTTGTTGCCGTCACAGGACT ACAGCATTTTTGTGATACAATGCCACCTGCACCCCCCCCCCAACATTAGC GCCCTCTGATTGTAGATAAATCACAAGTGCAGATACCGTAATCTCTGTCC TTCAAGTCAACGCCCTCAAGACCCTCCCCCCCTCACCAACGCGTATGCGC CCTTTCCTGCAGCCGTCGCATAACTACAACGCATTTGTGCGTCGCAACCT GCGGCGTGGCTACTCTGCCAAGGACATGAACGTGAGCTTCCTCGAGCAGC AGGCCATCAAGTTTGGCATGGTCAAGGAGCGCGTCGCAGAAAATACTATA GGTGATTTTAATCACCACTATTTGAGCTCATGTTGAACTTGAGTGCAATC ATGTGGTGATTGCGCAAAACTGTTGCATGACTGTGACTGCTGACAATGGT GGTCTTGAGAGCTCTCCTCTATTCTAATCTTGTGGAGTTAAGTTTTGAGT TGGCGTTGCTGAAACACATGAACGCGCAAAAATGGCACAGCTCACAGTCT GAGAGTGTGGTACCATTACTAGCAACAATTTTTGTCTCAACGTTGACACA GGCCGCCCCTACTTCACCGCCCCGCTGCTGTCACCACGCAGGCAAGCTCA TCAAGGAGAACTCGCAGGCGCAGGCACTCGCGGAGGACGTGCAGAAGGCC TTTGTGTCCGTCTTCGACCGCGACTCAGCGTTCCGCACGCGCTGGCGCAA CCAGCGCAAGGAGATCCGCAACAGGATCCGTGTGCTCGCCAGG
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Coding sequence (CDS) from alignment at Contig_25:862970..864562+

>mRNA_6693 ID=mRNA_6693|Name=jgi.p|Trimin1|144012|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=477bp|location=Sequence derived from alignment at Contig_25:862970..864562+ (Tribonema minus UTEX_B_3156 )
GTGCCGCAGGTCATTGACGATGCGCCGTGGGTCGTGACAGACGAGTTCTA
CTTCGAGTCCGGCAACGCGTCCGGCGTGAACGATGACGGCGACGTGTACG
CGCACCTCAATCGCGCGGGGCGCTTCGTTGAGACGTGCCGCACGGAGGGC
ATCTCCACCAGCGACAGCATTGCGTCCATCATGCAGCCGTCGCATAACTA
CAACGCATTTGTGCGTCGCAACCTGCGGCGTGGCTACTCTGCCAAGGACA
TGAACGTGAGCTTCCTCGAGCAGCAGGCCATCAAGTTTGGCATGGTCAAG
GAGCGCGTCGCAGAAAATACTATAGGCAAGCTCATCAAGGAGAACTCGCA
GGCGCAGGCACTCGCGGAGGACGTGCAGAAGGCCTTTGTGTCCGTCTTCG
ACCGCGACTCAGCGTTCCGCACGCGCTGGCGCAACCAGCGCAAGGAGATC
CGCAACAGGATCCGTGTGCTCGCCAGG
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