Trimin1|144012|gw1.25.89.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|144012
Unique Name	Trimin1\|144012\|gw1.25.89.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	159

Homology

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BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: A0A836CGI6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGI6_9STRA)

HSP 1 Score: 311 bits (798), Expect = 2.230e-107
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0

Query:    1 VPQVIDDAPWVVTDEFYFESGNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRIRVLAR 159
            VPQVIDDAPWVVTDEFYFESGNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRIRVLAR
Sbjct:    1 VPQVIDDAPWVVTDEFYFESGNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRIRVLAR 159

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BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: A0A835Z3L7_9STRA (Choline-phosphate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L7_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.610e-74
Identity = 131/170 (77.06%), Postives = 143/170 (84.12%), Query Frame = 0

Query:    1 VPQVIDDAPWVVTDEFY------------FESGNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRIRVLA 158
            V +V++DAPWVVTDEF                G+ASGV+DDGDVYAHL RAGRFVET RTEGISTSD I SI+Q   +Y+ FVRRNLRRGYSAKDMNVSFL++QAIKFGMVKERVAEN IGKLIKENSQAQALAED+QKAFVSVF+RDSAFRTRWRNQRKEIRNRI VLA
Sbjct:  207 VDEVVEDAPWVVTDEFLCAHSIDFVCHDALPYGDASGVSDDGDVYAHLKRAGRFVETRRTEGISTSDIITSIIQ---DYDEFVRRNLRRGYSAKDMNVSFLKEQAIKFGMVKERVAEN-IGKLIKENSQAQALAEDLQKAFVSVFNRDSAFRTRWRNQRKEIRNRIGVLA 372

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BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: A0A835Z8U6_9STRA (Choline-phosphate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U6_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.360e-54
Identity = 106/172 (61.63%), Postives = 120/172 (69.77%), Query Frame = 0

Query:    3 QVIDDAPWVVTDEFYFESG------------NASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPS--------------------HNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTR 142
            QV+ DAPWVVTDEF                 +ASGV+D+GDVYAHL RAGRFVET RTEGISTSD I SI+Q                       +Y+ FVRRNLRRGYS  DMNVS L++QAIKFGMVKERVAE+ IGKLIK+N QAQALAE++QKAFV VF+RDSAFRTR
Sbjct:    6 QVVKDAPWVVTDEFLRAHSIDFVCHDALPYIDASGVSDNGDVYAHLKRAGRFVETRRTEGISTSDIITSILQLGWQEAGAVRSGRLKALHCRLLQDYDKFVRRNLRRGYSINDMNVSCLKEQAIKFGMVKERVAES-IGKLIKKNPQAQALAENLQKAFVCVFNRDSAFRTR 176

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BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: A0A835Z6X4_9STRA (Choline-phosphate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6X4_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.250e-49
Identity = 98/180 (54.44%), Postives = 117/180 (65.00%), Query Frame = 0

Query:    3 QVIDDAPWVVTDEFY------------FESGNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQ------------PSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRIRVLA 158
            QV +DAPW VTDEF                 +AS V+D+G +Y HLNRAGRF+E  RTEGISTS + + ++             P  +Y+ FVRRN+ RGYSAKDMNVSFL++QAIKFG                EN QAQALAED+QKAFV++FDR+SAFRTRWRNQRK IRNRI VLA
Sbjct:   15 QVREDAPWAVTDEFLRAYSIDFVCHDALPYDHASSVSDNGGMYEHLNRAGRFIEMRRTEGISTSATSSPVLMNRLRRHSDAAGAPPTDYDEFVRRNVFRGYSAKDMNVSFLKEQAIKFGW---------------ENLQAQALAEDLQKAFVTLFDRESAFRTRWRNQRKAIRNRIGVLA 179

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BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: D8LPY9_ECTSI (Choline-phosphate cytidylyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPY9_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 4.830e-40
Identity = 91/215 (42.33%), Postives = 120/215 (55.81%), Query Frame = 0

Query:    1 VPQVIDDAPWVVTDEFY------------FESGNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQ--------------------------------------------AQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRIRVLAR 159
            V +V++DAPWVV ++F                G+ASG +  GDVYAHL R GRFVET RTEGISTSD I SI+Q   +Y+ FVRRN+ RGY+A+DMNV FL++QAIKF +VK++V    +GK+IK+  +                                            AQ    D+Q+ FV +FDRD A RT +R QR++IR R+ VLAR
Sbjct:  151 VDEVVEDAPWVVDEDFIAVHQIDFVCHDALPYGDASGQSSSGDVYAHLKRQGRFVETQRTEGISTSDIITSIIQ---DYDVFVRRNMERGYNARDMNVPFLKEQAIKFDIVKDKVTRR-VGKVIKDRQKKKTKQQAGGALITKGVKGRGXXXXGVDPNGNKERHNLVLDLGNHAQETITDMQRNFVQIFDRDGAIRTSFREQRRQIRERVNVLAR 361

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BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: H3GGV7_PHYRM (Choline-phosphate cytidylyltransferase n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3GGV7_PHYRM)

HSP 1 Score: 122 bits (305), Expect = 8.520e-31
Identity = 69/166 (41.57%), Postives = 105/166 (63.25%), Query Frame = 0

Query:    1 VPQVIDDAPWVVTDEFYFES------------GNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRI 154
            V +V++DAPWV++DEF  E              +ASG   +GDVYA +   G+F+ET RT+GISTSD I  I+     Y+ F+RRNL+RGYS KDMNV F+++++IKF M  ++V  +  G + K  S+A    +D+Q +F+ +F ++   RT +R +RK I+ R+
Sbjct:  136 VDEVVEDAPWVLSDEFLEEHQIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAE---YDTFIRRNLQRGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWISKA----DDMQHSFLELFSKEGRLRTSFRKRRKIIKERL 294

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BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: A0A5D6Y8Z6_9STRA (Choline-phosphate cytidylyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8Z6_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.290e-30
Identity = 68/166 (40.96%), Postives = 101/166 (60.84%), Query Frame = 0

Query:    1 VPQVIDDAPWVVTDEFYFESG------------NASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRI 154
            V +V++DAPWV+TD+F  +              +ASG   +GDVYA +   G+F+ET RT+GISTSD I  I+     Y+ F+RRNL RGY+ KDMNV F+++Q+IKF M  ++V  +  G       +    AED+Q  F+ +F R+   R+ +R QR++IR R+
Sbjct:  144 VDEVVEDAPWVITDDFLEQHAIDYVCHDALPYSDASGEAAEGDVYARIKAMGKFLETKRTDGISTSDLIIRIVAE---YDTFIRRNLARGYTGKDMNVPFMKEQSIKFDMAVDKVKHDVDGFF----HRLVGKAEDIQTGFLDLFRREGTLRSSFREQRQQIRRRL 302

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BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: K3WSJ0_GLOUD (Choline-phosphate cytidylyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSJ0_GLOUD)

HSP 1 Score: 121 bits (304), Expect = 1.990e-30
Identity = 69/166 (41.57%), Postives = 102/166 (61.45%), Query Frame = 0

Query:    1 VPQVIDDAPWVVTDEFYFESG------------NASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRI 154
            V +V++DAPWV+TDEF  +              +ASG   +GDVYA +   G+F+ET RT+GISTSD I  I+     Y+ F+RRNL RGY+ K+MNV F+++Q+IKF M  ++V  +  G + K   +A    ED+Q  F+ +F +D   RT +R +RK I+ R+
Sbjct:  162 VDEVVEDAPWVITDEFIEKHNIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETKRTDGISTSDLIIRIVAE---YDTFIRRNLARGYTGKEMNVPFMKEQSIKFDMAVDKVKHDVDGFVHKWVGKA----EDMQHGFLDLFSKDGRLRTSFRKRRKIIKERL 320

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BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: A0A8K1FT60_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FT60_PYTOL)

HSP 1 Score: 122 bits (306), Expect = 2.520e-30
Identity = 68/166 (40.96%), Postives = 106/166 (63.86%), Query Frame = 0

Query:    1 VPQVIDDAPWVVTDEFYFES------------GNASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRI 154
            V +V++DAPWV+TDEF  +              ++SG + DGDVYA +   G+F+ET RT+GISTSD I  I+     Y+ F+RRNL+RGY+ KDMNV F+++Q+IKF M  ++V ++ +  L+ +       AED+Q +F+ +F ++   RT +R +RK I+ R+
Sbjct:  215 VDEVVEDAPWVLTDEFIEKHQIDYVCHDALPYSDSSGESSDGDVYARIKMMGKFLETKRTDGISTSDLIIRIIAE---YDTFIRRNLQRGYTGKDMNVPFMKEQSIKFDMAVDKV-KHDVDSLVHK---VLGKAEDMQHSFLDLFSKEGRLRTSFRKRRKIIKERL 373

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BLAST of jgi.p|Trimin1|144012 vs. uniprot
Match: F0WYF1_9STRA (Choline-phosphate cytidylyltransferase n=2 Tax=Albugo TaxID=65356 RepID=F0WYF1_9STRA)

HSP 1 Score: 120 bits (302), Expect = 3.370e-30
Identity = 69/171 (40.35%), Postives = 107/171 (62.57%), Query Frame = 0

Query:    1 VPQVIDDAPWVVTDEFYFESG------------NASGVNDDGDVYAHLNRAGRFVETCRTEGISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVKERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEIRNRIRVLAR 159
            V +VI+DAPWV+TDEF  +              + SG + DGDVY  + + G+F+ET RT+GISTSD I  I++    Y+ F+RRNL+RGY+ K+MNVS+L++Q+IKF M  ++V  +  G + K   +A    +++Q  F+ +F RD   RT  R +R+ ++ R+  +AR
Sbjct:  158 VDEVIEDAPWVITDEFLDKHAIDYVCHDSLPYSDTSGESSDGDVYDRIKKMGKFLETKRTDGISTSDLINRIIKE---YDTFIRRNLQRGYTGKEMNVSYLKEQSIKFDMAVDKVKHDVDGFIHKWVGKA----DELQYNFLDLFSRDGPLRTSLRKRRRILKERLTDIAR 321

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|144012 vs. uniprot

BLAST of jgi.p|Trimin1|144012 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CGI6_9STRA	2.230e-107	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835Z3L7_9STRA	1.610e-74	77.06	Choline-phosphate cytidylyltransferase n=1 Tax=Tri...	[more]
A0A835Z8U6_9STRA	1.360e-54	61.63	Choline-phosphate cytidylyltransferase n=1 Tax=Tri...	[more]
A0A835Z6X4_9STRA	1.250e-49	54.44	Choline-phosphate cytidylyltransferase n=1 Tax=Tri...	[more]
D8LPY9_ECTSI	4.830e-40	42.33	Choline-phosphate cytidylyltransferase n=2 Tax=Ect...	[more]
H3GGV7_PHYRM	8.520e-31	41.57	Choline-phosphate cytidylyltransferase n=20 Tax=Pe...	[more]
A0A5D6Y8Z6_9STRA	1.290e-30	40.96	Choline-phosphate cytidylyltransferase n=1 Tax=Pyt...	[more]
K3WSJ0_GLOUD	1.990e-30	41.57	Choline-phosphate cytidylyltransferase n=1 Tax=Glo...	[more]
A0A8K1FT60_PYTOL	2.520e-30	40.96	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
F0WYF1_9STRA	3.370e-30	40.35	Choline-phosphate cytidylyltransferase n=2 Tax=Alb...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 1..150 e-value: 1.8E-18 score: 68.8
IPR045049	Choline-phosphate cytidylyltransferase Pcy1-like	PANTHER	PTHR10739	CYTIDYLYLTRANSFERASE	coord: 2..149

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_25	contig	Contig_25:862970..864562 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|144012	mRNA_6693	Tribonema minus UTEX_B_3156	mRNA	Contig_25 862970..864562 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|144012|gw1.25.89.1 ID=Trimin1|144012|gw1.25.89.1|Name=jgi.p|Trimin1|144012|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=159bp
VPQVIDDAPWVVTDEFYFESGNASGVNDDGDVYAHLNRAGRFVETCRTEG
ISTSDSIASIMQPSHNYNAFVRRNLRRGYSAKDMNVSFLEQQAIKFGMVK
ERVAENTIGKLIKENSQAQALAEDVQKAFVSVFDRDSAFRTRWRNQRKEI
RNRIRVLAR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold
IPR045049	Pcy1-like