mRNA_6672 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348499
Unique NamemRNA_6672
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|348499 vs. uniprot
Match: A0A835Z8T5_9STRA (Methyltransferase type 12 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8T5_9STRA)

HSP 1 Score: 574 bits (1479), Expect = 4.000e-205
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 3
Query:   36 MEQAEEQLAERAQASASPMIANLIKSLGQAIVYYPDAGNLDTNRKLWDAYASEWSQDASWVQDMARGSRPGDGGPSATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEEWSTSDELMQVVREFILPYLNPDSRAAELGCGGGRVAVQVYPHVSNLDCYDISPQMLTRCAAALKAAGARNATLQLLTAPALPAAAADSYDFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCSRLGWERFARQSKFTVGGFYFMCPEMVRFIVAKAGLRIVREGPPEGTTDNVYYNRDFLIVVEKDSNWVNGDGDES 986
            MEQAEEQLAERAQASASPMIANLIKSLGQAIVYYPDAGNLDTNRKLWDAYASEWSQDASWVQDMARGSRPGDGGPSATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEEWSTSDELMQVVREFILPYLNPDSRAAELGCGGGRVAVQVYPHVSNLDCYDISPQMLTRCAAALKAAGARNATLQLLTAPALPAAAADSYDFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCSRLGWERFARQSKFTVGGFYFMCPEMVRFIVAKAGLRIVREGPPEGTTDNVYYNRDFLIVVEKDSNWVNGDGDES
Sbjct:    1 MEQAEEQLAERAQASASPMIANLIKSLGQAIVYYPDAGNLDTNRKLWDAYASEWSQDASWVQDMARGSRPGDGGPSATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEEWSTSDELMQVVREFILPYLNPDSRAAELGCGGGRVAVQVYPHVSNLDCYDISPQMLTRCAAALKAAGARNATLQLLTAPALPAAAADSYDFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCSRLGWERFARQSKFTVGGFYFMCPEMVRFIVAKAGLRIVREGPPEGTTDNVYYNRDFLIVVEKDSNWVNGDGDES 317          
BLAST of jgi.p|Trimin1|348499 vs. uniprot
Match: D8LRQ6_ECTSI (Methyltransferase type 12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ6_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 2.210e-83
Identity = 142/308 (46.10%), Postives = 194/308 (62.99%), Query Frame = 3
Query:   36 MEQAEEQLAERAQASASPMIANLIKSLGQAIVYYPDAGNLDTNRKLWDAYASEWSQDASWVQDMARGSRPGDGGPSATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEEWSTSDELMQVVREFILPYLNPDSRAAELGCGGGRVAVQVYPHVSNLDCYDISPQMLTRCAAALK---AAGARNATLQLLTAPALPAAAADSYDFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCSRLGWERFARQSKFTVGGFYFMCPEMVRFIVAKAGLRIVREGPPEGTTDNVYYNRDFLIVVEK 950
            M++  + L E+++A  + M++NL++SLG A+VY PDAGN DTNRKLWD YA+EW  DASWVQ MA+GS+                                      VG+EWST D++M+V+ +FILP +  +S   E+GCGGGRV V+V+     L C+DIS  ML R   A+     AG       LL+ P LP  A+DS DF+  +DVLVHVDLH++ +Y+RE+ R L   G+AFLS A+  S  GW+RF  Q K++VGGFYFMCP+MVR ++ KAGLR+VREG  + +  N YYNRD+L++V+K
Sbjct:    1 MQECVDTLTEKSKAG-NEMVSNLVQSLGSALVY-PDAGNFDTNRKLWDNYAAEWEPDASWVQKMAQGSKT--------------------------------ERLEVVGDEWSTRDDVMRVINDFILPNVTEESNVGEIGCGGGRVTVEVFRKAGQLTCFDISKNMLKRTRDAVGEGVCAGGGKVIFVLLSQPRLPENASDSLDFVILYDVLVHVDLHITNKYIREIARVLKPGGKAFLSTANFLSPGGWDRFNAQDKYSVGGFYFMCPDMVRLMLDKAGLRVVREGDHDPS--NSYYNRDYLVLVQK 272          
BLAST of jgi.p|Trimin1|348499 vs. uniprot
Match: A0A7S2UUH0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUH0_9STRA)

HSP 1 Score: 241 bits (616), Expect = 7.100e-75
Identity = 127/288 (44.10%), Postives = 177/288 (61.46%), Query Frame = 3
Query:   90 MIANLIKSLGQAIVYYPDAGNLDTNRKLWDAYASEWSQDASWVQDMARGSRPG-DGGPSATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEEWSTSDELMQVVREFILPYLNPDSRAAELGCGGGRVAVQVYPHVSNLDCYDISPQMLTRCAAALKAAGARNATLQLLTAPALPAAAADSYDFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCSRLGWERFARQSKFTVGGFYFMCPEMVRFIVAKAGLRIVREGPPEGTTDNVYYNRDFLIVVEK 950
            M  +LI SLG A+VY PD GN  TN+KLW+ YA EWS    WV+D+AR +    D G S+                              VG+EWS   +L +++++F+  Y++ D   AE+GCGGGR+A +V P V  +DCYDIS +M+++   AL      N    +L  P+        YDF+YCFDV+VH+DLH+  +Y  E+ R L + G+AF+S A++ S  GW RF++Q K+TVGGFYF+CPEMVRF++ K GLR V+EGP E +T NVY NRD+L++VEK
Sbjct:    1 MAMSLINSLGSALVY-PDQGNFVTNKKLWNLYAQEWSPSEDWVKDIARPNNSSQDIGSSSNEVDELKF----------------------VGQEWSPDTDLEEILQQFVYDYIDEDKLVAEIGCGGGRLAAKVAPRVKKMDCYDISKEMISQAEKALSFLS--NVDFHILEEPSFSKNCEKLYDFIYCFDVMVHMDLHLINKYFGEIGRALKDDGKAFISTANITSTGGWARFSKQRKYTVGGFYFLCPEMVRFLLHKNGLRPVKEGPIEEST-NVYLNRDYLVLVEK 262          
BLAST of jgi.p|Trimin1|348499 vs. uniprot
Match: A0A7S2SUS9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUS9_9STRA)

HSP 1 Score: 237 bits (605), Expect = 1.350e-72
Identity = 132/306 (43.14%), Postives = 180/306 (58.82%), Query Frame = 3
Query:   33 TMEQAEEQLAERAQASASPMIANLIKSLGQAIVYYPDAGNLDTNRKLWDAYASEWSQDASWVQDMARGSRPGDGGPSATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEEWSTSDELMQVVREFILPYLNPDSRAAELGCGGGRVAVQVYPHVSNLDCYDISPQMLTRCAAALKAAGARNATLQLLTAPALPAAAADSYDFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCSRLGWERFARQSKFTVGGFYFMCPEMVRFIVAKAGLRIVREGPPEGTTDNVYYNRDFLIVVEK 950
            T+E  EE+L  +A    SPM+  L+KSL QA+VY PDAGN DTNRKLWD YA EW     W+Q M+R  +                                      VG+EW+    L +VV++FIL  ++   +  E+G GGGRVA +V PHV +L C DIS +ML RC   L+A    N +   LT P  P     ++ F+Y FDV VHVDLH+  +YL E+ + L   G+AF+S A++ +  GWERFARQSK+TVGGFYF+CP+MV  ++ K GLRI+R    + +  NVYY+RD+L++V+K
Sbjct:    7 TLEDVEERLRGKAAQEGSPMVLELLKSLNQAVVY-PDAGNFDTNRKLWDLYAGEWDPAQPWLQQMSRDVQAS-----------------------------LEQDIHIVGDEWAPPTHLDRVVQDFILTEVDSSCQVLEVGSGGGRVAARVAPHVGHLKCADISMEMLKRCRDTLQAH--TNISFLHLTQPRFPDHLHGTFHFVYVFDVFVHVDLHLIHQYLSEIYKLLVPGGKAFISTANLMTSGGWERFARQSKYTVGGFYFLCPDMVNRLIDKNGLRILRHADEDPS--NVYYSRDYLVLVQK 278          
BLAST of jgi.p|Trimin1|348499 vs. uniprot
Match: F0XX81_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX81_AURAN)

HSP 1 Score: 205 bits (521), Expect = 2.370e-60
Identity = 122/319 (38.24%), Postives = 178/319 (55.80%), Query Frame = 3
Query:   36 MEQAEEQLAERAQASASPMIANLIKSLGQAIVYYPDAGNLDTNRKLWDAYASEWSQDASWVQDMARGSRPGDGGPSATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEEWSTSDELMQVVREFILPYLNPDSRAAELGCGGGRVAVQVYPHVSNLDCYDISPQMLTRCAAALKAAGARNATLQLLTAPALPAAA-------------ADSYDFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCSRLGWERFARQSKFTVGGFYFMCPEMVRFIVAKAGLRIVRE-GPPEGTTDNVYYNRDFLIVVEK 950
            M+  +EQ   +       M+  +++SL  A++Y P+AGN+ TN KLWD YASEW ++A WV +MA  +R  DG  +  A                            VG+EW+      +VV E+IL  + P++R  E+G GGGR+A  V P V++L C D+S +ML R  AAL A G    +  L+   A P+ A             A  +DF+YCFDV+VH+D H  +R LR V   L + GRAF+S A++ +  G+ RF +QSK++VGGF+F+ PE VR +  KAGL +VRE   P+ +  N YYNRD+L ++ +
Sbjct:    1 MQAEQEQYLRKVAGKGQEMVQQMVQSLSSALIY-PEAGNVATNEKLWDVYASEWGKEAPWVVEMAATNR--DGAVALDA----------------------------VGDEWAPRAHTERVVDEWILSEVTPEARCCEIGSGGGRIAALVAPRVASLACCDVSAKMLARAEAAL-AGGPAATSFHLVHGDAAPSDAGFGAGPRAYPPTMARGFDFVYCFDVMVHLDAHAMYRCLRRVESLLADGGRAFVSTANLKAPDGFARFEKQSKYSVGGFFFVTPETVRVLADKAGLAVVRELDAPDAS--NTYYNRDYLAILAR 285          
BLAST of jgi.p|Trimin1|348499 vs. uniprot
Match: W7TSG7_9STRA (Deacetylase sulfotransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSG7_9STRA)

HSP 1 Score: 203 bits (516), Expect = 2.430e-58
Identity = 123/311 (39.55%), Postives = 169/311 (54.34%), Query Frame = 3
Query:   90 MIANLIKSLGQAIVYYPDAGNLDTNRKLWDAYASEWSQDASWVQDMARGSRPGDGGPSATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEEWSTSDELMQVVREFILPYLNPDSRAAELGCGGGRVAVQVYPHVSNLDCYDISPQMLTRCAAALKAAGARNAT-LQLLTA-----PALPAAAAD-------SYDFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCSRLGWERFARQSKFTVGGFYFMCPEMVRFIVAKAGLRIVREGP-PEGTTD----------NVYYNRDFLIVVEK 950
            ++ ++I SL  A+VY  D GN++TNR+LW+ YA EW  + +     +  +R       A                              +G+EWS+ ++L +VVR+FILPYL P+S   E+G GGGRVA  V      L C DIS +ML     AL A  A  AT L+ +       P+LP+   +         DF+YCFDVLVHVD+H  +  LRE+RR L   G+AFLS A++ S  GW RFA Q K+TVGGFYF+ PE+V  ++AK G R+V+    PEG  +          N+YY RD+L+VVEK
Sbjct:   68 IVRSVINSLSGAMVY-TDVGNVETNRRLWNRYAEEWHGNCARNGPYSGSARSPSSELPANKPNVWVQQMAANTAKTSKSTPYSLPALALIGQEWSSPEDLEEVVRDFILPYLTPESAVVEVGVGGGRVAALVLGKCMRLTCLDISERMLEAARTALAAHPAAGATVLEFILVGNDSNPSLPSQRVEYPVSLHGRCDFVYCFDVLVHVDVHTLYHTLREIRRLLKASGKAFLSTANILSPAGWRRFAAQDKYTVGGFYFVSPEIVHGMLAKVGFRVVQHSEIPEGFKELSDTHGLAKGNLYYGRDYLVVVEK 377          
BLAST of jgi.p|Trimin1|348499 vs. uniprot
Match: A0A7S2F3I0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3I0_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.690e-55
Identity = 98/198 (49.49%), Postives = 138/198 (69.70%), Query Frame = 3
Query:  357 VGEEWSTSDELMQVVREFILPYLNPDSRAAELGCGGGRVAVQVYPHVSNLDCYDISPQMLTRCAAALKAAGARNATLQLLTAPALPAAAADSYDFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCSRLGWERFARQSKFTVGGFYFMCPEMVRFIVAKAGLRIVREGPPEGTTDNVYYNRDFLIVVEK 950
            VG+EW+    L ++V EFI P++N ++ A E+G GGGRVA  V PHV++L C DIS +MLTR   AL+ +   N T  LLT P+ P     + DF+Y FDV VH+DLH+ ++YL E+RR L   GRAF+S A++ +  GW+RF RQSKFTVGGFYF+ PE+V  ++ ++GLR+V  GP + +  NVY +RD+L V+E+
Sbjct:   24 VGDEWAPPGHLERIVDEFIRPFVNAETVALEIGSGGGRVARCVAPHVASLCCADISEKMLTRAKVALEESP--NVTFMLLTRPSFPPRLDATLDFIYAFDVFVHMDLHLLFKYLGEMRRLLKPGGRAFMSTANLLTPGGWQRFERQSKFTVGGFYFLSPEIVNSLIERSGLRLVMTGPEDAS--NVYLSRDYLTVLER 217          
BLAST of jgi.p|Trimin1|348499 vs. uniprot
Match: A0A812TK35_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812TK35_9DINO)

HSP 1 Score: 192 bits (488), Expect = 3.440e-55
Identity = 116/309 (37.54%), Postives = 166/309 (53.72%), Query Frame = 3
Query:   36 MEQAEEQLAERAQASASPMIANLIKSLGQAIVYYPDAGNLDTNRKLWDAYASEWSQDASWVQDMARGSRPGDGGPSATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEEWSTSDELMQVVREFILPYLNPDSR---AAELGCGGGRVAVQVYPHVSNLDCYDISPQMLTRCAAALKAAGARNATLQLLTAPA-LPAAAADSYDFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCSRLGWERFARQSKFTVGGFYFMCPEMVRFIVAKAGLRIVREGPPEGTTDNVYYNRDFLIVVEK 950
            +EQ E  L   ++   +PM+  L+K L +  VY  DA N +TNRKLWDAYA  WS D +WVQ M+       G  S  AA                           VG+EWS  + L  V+ +++ P+L  + +    AE+G GGGR+A +V P V  L C+D+S  ML R ++ +   G R+   QL+   A  P      +DF+Y FDV VH+DLH   + L  VR  L   G  F+SFA++ +  GW+RFA+Q K++VGGFYF+ P++VR ++  AG  +VR   P+    N Y NRD L++  K
Sbjct:   31 LEQVEAMLVAESEGRQNPMVLELLKDLQKCAVY-TDAPNHETNRKLWDAYAQSWSSDVAWVQRMS-------GHVSREAAALKF-----------------------VGDEWSDVESLDAVLSDWLYPHLEDEQKLKTVAEVGSGGGRIAARVAPKVERLVCFDVSEGMLARASSRIAELGHRHVEFQLVHGGAPYPEEYHTFFDFVYSFDVFVHMDLHQMRQTLHCVRAILRPGGLCFISFANLLAPDGWQRFAKQQKYSVGGFYFVSPDIVRCLLTHAGFSLVRMSKPQA--GNTYLNRDLLVLARK 306          
BLAST of jgi.p|Trimin1|348499 vs. uniprot
Match: A0A8J2SCW4_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCW4_9STRA)

HSP 1 Score: 191 bits (485), Expect = 9.940e-53
Identity = 116/313 (37.06%), Postives = 165/313 (52.72%), Query Frame = 3
Query:   48 EEQLAERAQASASPMIANLIKSLGQAIVYYPDAGNLDTNRKLWDAYASEWSQDASWVQDMARGSRPGDGGPSATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEEWSTSDELMQVVREFILPYLNPDSRAAELGCGGGRVAVQVYPHVSNLDCYDISPQMLTRCAAALKAAGARNATLQLLTAPALPAAAADS-------------YDFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCSRLGWERFARQSKFTVGGFYFMCPEMVRFIVAKAGLRIVRE-GPPEGTTDNVYYNRDFLIVV 944
            EE L E A      M+  +++ L  A++Y PDAGN+ TN KLWD YASEW  +A WV  MA  +R                                      VG+EW+ +    +VV E+IL  ++  +   E+G GGGR+   V P VS L C+D+S +ML     AL  A   N T   +   A  A A  S             YDF+YCFDV+VH+D H  +R L+ +R  L + G+AF+S +++ +  G+ RF  Q K++VGGFYF+ PE VR +V++AGLR+VRE   P+ +  N YYNRD+L ++
Sbjct:    6 EEYLREAA-GRGHEMVQQMVQKLSGALIY-PDAGNVQTNEKLWDVYASEWGAEAGWVAGMAASNREAK------------------------------ETLENVGDEWAPAAHTKRVVDEWILSEVSLKTHCCEIGSGGGRIGRMVAPRVSKLQCFDVSAKMLAAAKQAL--ASQENVTFAQIHGDASGADAGFSDKPRHYAPQHKHAYDFVYCFDVMVHMDAHAMFRCLKRIRALLKDEGKAFISTSNLLAPDGFRRFEAQEKYSVGGFYFVTPETVRCLVSRAGLRVVRELSAPDAS--NTYYNRDYLALL 282          
BLAST of jgi.p|Trimin1|348499 vs. uniprot
Match: A0A6A7GCB0_9CRUS (Methyltransferase type 12 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GCB0_9CRUS)

HSP 1 Score: 184 bits (466), Expect = 4.590e-52
Identity = 105/305 (34.43%), Postives = 162/305 (53.11%), Query Frame = 3
Query:   48 EEQLAERAQASASPMIANLIKSLGQAIVYYPDAGNLDTNRKLWDAYASEWSQDASWVQDMARGSRPGDGGPSATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEEWSTSDELMQVVREFILPYLNPDSRAAELGCGGGRVAVQVYPHVSNLDCYDISPQMLTRCAAAL--KAAGARNATLQLLT--APALPAAAADSYDFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCSRLGWERFARQSKFTVGGFYFMCPEMVRFIVAKAGLRIVREGPPEGTTDNVYYNRDFLIVVEK 950
            E  ++ +++   +  I NL+K+LG ++VY  +  N+  N+KLWD YA +WS +  WVQ MA GS      P+                               +G+EWS     ++VV  FI+  +       E+G GGGRVA  V P VS+L C+D+S +ML +CA     K    R   L+  T   P  P     ++DF+Y FDVLVHVD+H  + Y +++ + L   G+A +  A++C+  GW+RF +Q KF+V GFYF+ P++V  ++AK+G  I+     +    NVY +RD+ +VV K
Sbjct:   13 ESLISSQSKHDGTSQIRNLLKNLGASVVY--EESNVVANKKLWDIYAKDWSPNKDWVQRMAHGSTESSSTPNIDGKKRGIEC---------------------LGDEWSDRKSFLEVVDRFIVSNIKKSDSVLEIGSGGGRVASLVCPLVSSLHCFDVSSEML-KCAQKTLSKFNNVRFTLLESSTDSPPTFPIKLTSTFDFVYLFDVLVHVDIHTQFNYFQQIFQLLKPDGKALIHTANLCAPNGWKRFEKQKKFSVAGFYFVTPDLVDLLLAKSGFEIIERSSIDER--NVYLSRDYFVVVRK 291          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348499 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8T5_9STRA4.000e-205100.00Methyltransferase type 12 n=1 Tax=Tribonema minus ... [more]
D8LRQ6_ECTSI2.210e-8346.10Methyltransferase type 12 n=1 Tax=Ectocarpus silic... [more]
A0A7S2UUH0_9STRA7.100e-7544.10Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SUS9_9STRA1.350e-7243.14Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0XX81_AURAN2.370e-6038.24Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
W7TSG7_9STRA2.430e-5839.55Deacetylase sulfotransferase n=2 Tax=Monodopsidace... [more]
A0A7S2F3I0_9STRA1.690e-5549.49Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A812TK35_9DINO3.440e-5537.54Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A8J2SCW4_9STRA9.940e-5337.06Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A6A7GCB0_9CRUS4.590e-5234.43Methyltransferase type 12 (Fragment) n=1 Tax=Hiron... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_25contigContig_25:606082..611469 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348499|estExt_Genemark1.C_Ctg_250080
DescriptionMethyltransferase domain
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs2CCND@1|root,2S208@2759|Eukaryota
Evalue3.07e-84
Seed ortholog2880.D8LRQ6
Hectar predicted targeting categoryother localisation
TranscriptId348821
TrackFilteredModels1
ProteinId348499
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348499gene_6672Tribonema minus UTEX_B_3156 geneContig_25 606082..611469 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348499Trimin1|348499|estExt_Genemark1.C_Ctg_250080Tribonema minus UTEX_B_3156 polypeptideContig_25 606187..611434 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6672_8exon_6672_8Tribonema minus UTEX_B_3156 exonContig_25 606082..606250 -
exon_6672_7exon_6672_7Tribonema minus UTEX_B_3156 exonContig_25 607166..607254 -
exon_6672_6exon_6672_6Tribonema minus UTEX_B_3156 exonContig_25 608202..608396 -
exon_6672_5exon_6672_5Tribonema minus UTEX_B_3156 exonContig_25 609041..609158 -
exon_6672_4exon_6672_4Tribonema minus UTEX_B_3156 exonContig_25 609666..609772 -
exon_6672_3exon_6672_3Tribonema minus UTEX_B_3156 exonContig_25 610484..610688 -
exon_6672_2exon_6672_2Tribonema minus UTEX_B_3156 exonContig_25 611087..611187 -
exon_6672_1exon_6672_1Tribonema minus UTEX_B_3156 exonContig_25 611360..611469 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_6672UTR3_6672Tribonema minus UTEX_B_3156 three_prime_UTRContig_25 606082..606186 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6672CDS_6672Tribonema minus UTEX_B_3156 CDSContig_25 611360..611434 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_6672UTR5_6672Tribonema minus UTEX_B_3156 five_prime_UTRContig_25 611435..611469 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6672 ID=mRNA_6672|Name=jgi.p|Trimin1|348499|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1094bp|location=Sequence derived from alignment at Contig_25:606082..611469- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCAGTGCGCTGCCGAGAGCCAGGACTGGTTGAACGATGGAGCAGGCGGAA
GAGCAGCTCGCGGAGCGGGCGCAGGCCTCAGCCAGCCCCATGATCGCCAA
TCTCATCAAGTCATTGGGCCAGGCCATTGTGTACTACCCAGATGCCGGAA
ACTTGGACACCAATCGCAAGCTGTGGGATGCTTACGCTTCTGAATGGTCG
CAGGACGCCAGCTGGGTGCAGGACATGGCGCGCGGGTCGCGGCCGGGGGA
CGGGGGGCCCAGCGCAACTGCTGCAGGTGCAGAACCAGGATCCGCAGGCG
CAGCTAGTGATCGTGAGGGCGGTGCAAGTGCCGCTGCGGGGATTGCACTG
GAGCGCGTGGGGGAGGAGTGGTCCACATCCGATGAGCTGATGCAAGTAGT
TCGGGAGTTTATTCTGCCGTACTTGAACCCGGACAGCAGAGCGGCGGAGC
TGGGGTGCGGCGGCGGGCGCGTCGCAGTACAGGTGTACCCGCACGTGTCC
AACCTGGACTGCTACGACATAAGCCCCCAGATGCTGACGCGGTGCGCGGC
GGCGCTCAAAGCGGCGGGCGCGCGCAACGCGACGCTGCAGCTGCTGACGG
CGCCGGCCCTGCCCGCCGCAGCCGCAGACTCCTACGACTTTCTGTACTGC
TTTGACGTCCTCGTCCACGTCGACCTGCACGTGTCCTGGCGCTACCTGCG
CGAGGTGCGGCGCTGCCTGACAGAGCGCGGGCGCGCGTTCCTGTCGTTCG
CCAGCGTCTGCAGCCGCCTCGGCTGGGAGCGCTTTGCGCGCCAGTCCAAG
TTCACCGTTGGGGGCTTCTACTTCATGTGTCCAGAGATGGTGCGATTTAT
CGTGGCCAAGGCGGGCCTGCGCATCGTCAGAGAGGGCCCTCCAGAGGGCA
CCACCGACAACGTCTACTACAACAGGGATTTCCTCATCGTCGTCGAGAAG
GACTCAAACTGGGTCAACGGCGACGGCGATGAAAGCTGATTTTGGCCGCC
AGCATGCAACAGGCCTCCGACATGTGCACAGAGTGCACTGCACCACCCTC
TGTTTGGGTATAGGGTTAGGATTAGGGCTAGGGGGGGTTAGGGC
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protein sequence of jgi.p|Trimin1|348499

>Trimin1|348499|estExt_Genemark1.C_Ctg_250080 ID=Trimin1|348499|estExt_Genemark1.C_Ctg_250080|Name=jgi.p|Trimin1|348499|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=318bp
MEQAEEQLAERAQASASPMIANLIKSLGQAIVYYPDAGNLDTNRKLWDAY
ASEWSQDASWVQDMARGSRPGDGGPSATAAGAEPGSAGAASDREGGASAA
AGIALERVGEEWSTSDELMQVVREFILPYLNPDSRAAELGCGGGRVAVQV
YPHVSNLDCYDISPQMLTRCAAALKAAGARNATLQLLTAPALPAAAADSY
DFLYCFDVLVHVDLHVSWRYLREVRRCLTERGRAFLSFASVCSRLGWERF
ARQSKFTVGGFYFMCPEMVRFIVAKAGLRIVREGPPEGTTDNVYYNRDFL
IVVEKDSNWVNGDGDES*
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mRNA from alignment at Contig_25:606082..611469-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6672 ID=mRNA_6672|Name=jgi.p|Trimin1|348499|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5388bp|location=Sequence derived from alignment at Contig_25:606082..611469- (Tribonema minus UTEX_B_3156 )
GCAGTGCGCTGCCGAGAGCCAGGACTGGTTGAACGATGGAGCAGGCGGAA GAGCAGCTCGCGGAGCGGGCGCAGGCCTCAGCCAGCCCCATGATCGCCAA TCTCATCAAGGTCAGCTGGACCTATACCTGTGTACTGCCAATTGTGTGCA GATTCAGAGTTATTTATAAAGCATCGCTGTATACGCTGATGTTTGGCGAT GGTCAGGCAGCAACAAGTAGACGTGACGAGTCAGCACTCACAATCGTGCT GCTCCCTCCTGTTGCCTGGTGACATAATGCAGTCATTGGGCCAGGCCATT GTGTACTACCCAGATGCCGGAAACTTGGACACCAATCGCAAGCTGTGGGA TGCTTACGCTTCTGAATGGTCGCAGGACGCCAGGTGCGCACCACTAAACA CTGTCGAAAGGGTCGCTTAAACCTTTGGATGTACATGTAAGGTTAGGTCG CAGACTGCAGGTTGAGCGTGTCGCAGTCTGCCAGTTTGCTGGATCCAGAT GCGTTGTGGTGGGTTCTTATGAAGGACATTCTCGCCAGTGCTGGCAACGC AACTCAACTGCTGCGGGCCTGCCTGTTTTGCCTGTGTTACACAGGCGTGA GGAGGACACCCAAGGAATCAGCGCAGTCATTCGCGAACACACCATGGAAT CAAGTGCTGTTCAGCTCATGCCCGCCACTGCCACACATGCTCCCATACAC GAGCCACCCATCCCCAAAGCCATATGGCGTGACGCACATTCACTCGCCCC CCTCGCCCGCCGCCACGCACACACGCGACAGCTGGGTGCAGGACATGGCG CGCGGGTCGCGGCCGGGGGACGGGGGGCCCAGCGCAACTGCTGCAGGTGC AGAACCAGGATCCGCAGGCGCAGCTAGTGATCGTGAGGGCGGTGCAAGTG CCGCTGCGGGGATTGCACTGGAGCGCGTGGGGGAGGAGTGGTCCACATCC GATGAGCTGATGCAAGTAGTTCGGGAGTTTATTCTGGTGAGTCGCGGTGC CGTATGCGCAGAGTTCCTGTCTACTGATGATTTCCGCAGGGAACGTTGCT GCTGTATGCCGTCAGGTAGGCGCAAACCACAAAGAGGCAGGCAGCGGTGG GGGGCGGGGGCATCGTCGTGAGGCGGCCGCCGACGGGCGTTGGCACGGGC GAGCGGACGCCTCGTTACATCGACTGAAGCTAATGAGCGGATGTGTCAGT TGGCGACCTTGTTTAGAAGGGATCGTCAACGGACATTGCGACACCTCCAA GTCCTCACAAGATACGTGCAGATACTGGTAGCAAGCTGGACTTGCGCCGT CTGCGCTTTCTTGCACCCCAAGCGAGAACTGTCAAGGAGTACATCAGCGC GTGGTGACTCATGCTGGCATGGTATGATCATGAGTCATGTCTTGAGTCAT GAGTCATGTCAACAATGGTACGGTCGTCAGACATGTCTTGAGTCATGATT CATGTCATCAGTGCCGCTCTGCTGCTGGCGACTGGTGCAGCGTCGACAGT AGGCGGGCAAGGCAGCATACTGGATTAGCTTTGTCGTGTGCATCAACAAC TTGGTCATGAAAAGCGTCATGCTGACCGACTGGCGGCATCAGGGTGCGCT ACGGTTCTTTTTGGTACTCGAAGACGTTACGCCTCTAATTTGGCGGAAAC TGAAGACGCGTCGTGGCCCCATCTGTCTGTCCAATTCGCTGCTACAGCCG TACTTGAACCCGGACAGCAGAGCGGCGGAGCTGGGGTGCGGCGGCGGGCG CGTCGCAGTACAGGTGTACCCGCACGTGTCCAACCTGGACTGCTACGACA TAAGGTGCGTTGCACAGCCATTCGACGGACCAGGGCACGCTTGCCGTTGG GCGAGCTTCTGGGTATGCATGTGTATGATTGGTATGCATTATTGCCGTAC GCGGAGGAGGGCACCAGAGGAAGTGCTACAAAACGCAGCCAACCCCCCTT TTTTGCTGTGCCATGGTCATACTTGAACAGATGGTGCCGTGCATGGCAAC TGAATGCCAGAGGCCACTCTGCAGTTCACCGCGCGCAATGACGGTTGTCA ACAACAGCGACCCACGATATCACCGAGGACATGACGCTGGCGTCAGGCGG GCTGCCTCAAGAGATGCCTAGATTTGATGTGTGCCATGCCCCTCAAGTTT TACTTCAACACTTGTCTGCGCCCCGCGCCACAAGCTCCAAACTTCCCCCA CCCAGCATTACGATGGGGGTCAGCTTGACAGGCGCGCTGCCTGACACACC CTACATACCCCTACGCAAGCGCCTCTGATACCAACATACCCATGCCGCTC TATCGCCGCAGCCCCCAGATGCTGACGCGGTGCGCGGCGGCGCTCAAAGC GGCGGGCGCGCGCAACGCGACGCTGCAGCTGCTGACGGCGCCGGCCCTGC CCGCCGCAGCCGCAGACTCCTACGACTTTGTGAGTGCGCGGGCGTTGTTG TTGTTGATTAGGTCGTGCGGCATCAGTGGCTTAGGGTTAGGGTTAGGGTT AGGGTTAAGGGTAGGGTTAGGCGCATTCGGGGTGCCTGCGCGGCGGCATT TGGAGTTTTTGTGTAGCCTCGCCTGCGGATGCCAATGGGTTCATGCCATT TCGTCGTGAATGCGTGTGTCGCATCCGTCAGCGTACGCGCCGAACTGGCC CAGATTTCAGCCACGACACTCGCCCGTGGACGATCGCGCGGATATGCTTG CTGTTCAATCGGCGGCTCGCCACTTGCAATTATGAAAGGCACCGGCTCTA CTGCCCTCCCCCCTGCCGCCCCCGCCCCTCATTGCACACATAGCTTGAAT TGACCAGCCCTATCTGTGCCTCCACACCCCTGTTTTCCCTTAACCCCCCC CCCCACCCTCCGGGCCCCCCTCTCACCCCCTCCCCAGCTGCGCTGCTGCA ACGTCTTCTATTATGATAAATGTCTTTCGACCTGCGCCCCCGTCACATGC AGCTTGACCTGACCAACCCCACCCTCCCCCCCCTTCATTTACGCGCGCCT CCCATCAAACGCACACCCGACTAAATGACCCCCCCCCCCCCCCCCGCCCC CCCCGCGCCGCCCGTCCCCCCAGCTGTACTGCTTTGACGTCCTCGTCCAC GTCGACCTGCACGTGTCCTGGCGCTACCTGCGCGAGGTGCGGCGCTGCCT GACAGAGCGCGGGCGCGCGTTCCTGTCGTTCGCCAGCGTCTGCAGCCGCC TCGGCTGGGAGCGCTTTGCGCGCCAGTCCAAGTTCACCGTTGGGGGCTTC TACTTCATGTGTCCAGAGGTGAGAGCACGTTGCGCTGGTATTTGCATTTG AGCGTCTGTGCATGGTGTGCGTGTGCGCGCGTGCGTGCGCGCGTGCGTGC GCGAGTGCGTGCGTGCGCGCGCGCCTGCTTGTGTGTGAGAGTGCGAGCAT GGTTTTGCATCTGAGTATCTGTATTTAAGTGTGTGCGAGTGTTTGTGCGC GCGAGTGCCTACGTGTGTGGATGCGAGTGTGCATACCTTCATATGGATGC CTACCCTGGGCGGATGGGGTGCGTCGGAAAGGTGCTGCGTTTGGCGCTCC GCTGTCACGGTTCACACGCGTTGAGGCAGGAGTGCCAGAGCGAGGCATGT TGCAAGGGCTGCGTGTTGGGGTGCTGGCGTGTGGCACGTCCACTTCGGCG ATTCAAGTTGAAGTGTAGTACCCAGGCACCCCAGGCGTGATAGCGTCAGC TTTACCGCAGTTTGTGCTGGATACTTCGTAGGGCAATCTGGGCATCATGC GACCAACGCGCCACGGCATTGCTACAGCACTGCCGTGACAAACGGCGGCC GTCATGTTGCGCAAGGGCTGAGGTCAACCCGGAGGCCGTTGACTGCCACT CCCTAAGCTCTGGTGCACCAGGCTGCAAAACCACCGTTTGTACTTCCTTG AACACAGGTTCTCGAATGCAATGAATGCTGATGCCACTGCAGGTCATCGT ATACAGCCTTAAACACGTGCCTGATATGCTGCGCAGTTCGCAAAACCGCT GCCGGCCAGAAGGCCACGGATTTGATTGCACCGCACTTTGGCGTCTCTCT TGCCTACCATGGGCAGTCGTCGCTAACGTGATTTTATCTTGCCACAAATA AACTAGAAAAACAATGGGTTTTGATTACTGTTTTTTAACATTGTACTCGC ACTTTTCACAAACATGCAAGTGTTCACGTTGGCGGCGGCAACGTGACGCC TCGCGCCTGCTGCAGATGGTGCGATTTATCGTGGCCAAGGCGGGCCTGCG CATCGTCAGAGAGGGCCCTCCAGAGGGCACCACCGACAACGTCTACTACA ACAGGTGGGCGTGACGTCTGTATGCACGTATGTATGTATGTAGAGTCTGC ATGCATGTATGCATGTATGTATGCACCACCGACCACGTCTGCTACAACAG GTAAGCCTGCATGCGTGTATGTATGTATGCGTGCACCACCGACAACGTCT GCTACAACAGGTGGGCGTGAAGTCCGTGTGCATAAAGGGACCAGGCTGAA AATGGGCACATTTCATGAGCCCCCGGGTGAGTTGGCAGCATGGCCGGATG ACACCTCGCACTGTATGCACCACCGACAACGTCTACTACAACAGAAGGGG ATTTGAAGTCTGCATGCATGTATGCATGTATGTATGCACCACCGACCACA TCTACTACAACAGGTGGGCGTGAAGTCCGTGTGCATAAAGGGACCGGGCA TAGAATGGGTACATTCTGCAAGCCCCCGGGTAGGCTGGCAGCGTGGCTGA ATCACACATCGGGTGTTTGGCACAGCTGCAGCAGCGGCGATAGCTGGCGG GCACCTTTGAAAGCATGTATTGTATGTATGTTGTCTGCTGGGTCCAGCAG GACAGATCTGCGCGCACACGAAACTGTAGATGAAAGAAGGCGTCGTTTAG CCTGGTGCTTCGGCCCTTGTACCCTTTAGGCTGCCACCCGATATCGCTCG TACGCAAGGATGGACAGTCCTGAAGGTGATGTCAGAGTACTGTATATGGA AACGACTCAGAAGATCGTCAAGAACGTCATGTCAACAGCACCTCAGTTTG GTGAAGAAGGTGTGCCCAAGTGCAGCGGTGCAGTTTCAGCCATGAACTTC AGACACGCGTTCATGAACCTGAGAAGCCCTTGACTGTTTCAACTGAGTTG CCCACTTTCATGTCAGGCGCTTCTGACCACCTGTTGCTGTTTGATTTTGT TTCTCCTTGTGTGCGCCAGGGATTTCCTCATCGTCGTCGAGAAGGACTCA AACTGGGTCAACGGCGACGGCGATGAAAGCTGATTTTGGCCGCCAGCATG CAACAGGCCTCCGACATGTGCACAGAGTGCACTGCACCACCCTCTGTTTG GGTATAGGGTTAGGATTAGGGCTAGGGGGGGTTAGGGC
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Coding sequence (CDS) from alignment at Contig_25:606082..611469-

>mRNA_6672 ID=mRNA_6672|Name=jgi.p|Trimin1|348499|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=954bp|location=Sequence derived from alignment at Contig_25:606082..611469- (Tribonema minus UTEX_B_3156 )
ATGGAGCAGGCGGAAGAGCAGCTCGCGGAGCGGGCGCAGGCCTCAGCCAG
CCCCATGATCGCCAATCTCATCAAGTCATTGGGCCAGGCCATTGTGTACT
ACCCAGATGCCGGAAACTTGGACACCAATCGCAAGCTGTGGGATGCTTAC
GCTTCTGAATGGTCGCAGGACGCCAGCTGGGTGCAGGACATGGCGCGCGG
GTCGCGGCCGGGGGACGGGGGGCCCAGCGCAACTGCTGCAGGTGCAGAAC
CAGGATCCGCAGGCGCAGCTAGTGATCGTGAGGGCGGTGCAAGTGCCGCT
GCGGGGATTGCACTGGAGCGCGTGGGGGAGGAGTGGTCCACATCCGATGA
GCTGATGCAAGTAGTTCGGGAGTTTATTCTGCCGTACTTGAACCCGGACA
GCAGAGCGGCGGAGCTGGGGTGCGGCGGCGGGCGCGTCGCAGTACAGGTG
TACCCGCACGTGTCCAACCTGGACTGCTACGACATAAGCCCCCAGATGCT
GACGCGGTGCGCGGCGGCGCTCAAAGCGGCGGGCGCGCGCAACGCGACGC
TGCAGCTGCTGACGGCGCCGGCCCTGCCCGCCGCAGCCGCAGACTCCTAC
GACTTTCTGTACTGCTTTGACGTCCTCGTCCACGTCGACCTGCACGTGTC
CTGGCGCTACCTGCGCGAGGTGCGGCGCTGCCTGACAGAGCGCGGGCGCG
CGTTCCTGTCGTTCGCCAGCGTCTGCAGCCGCCTCGGCTGGGAGCGCTTT
GCGCGCCAGTCCAAGTTCACCGTTGGGGGCTTCTACTTCATGTGTCCAGA
GATGGTGCGATTTATCGTGGCCAAGGCGGGCCTGCGCATCGTCAGAGAGG
GCCCTCCAGAGGGCACCACCGACAACGTCTACTACAACAGGGATTTCCTC
ATCGTCGTCGAGAAGGACTCAAACTGGGTCAACGGCGACGGCGATGAAAG
CTGA
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