mRNA_6632 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A836CF98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF98_9STRA) HSP 1 Score: 489 bits (1259), Expect = 2.310e-174 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1 Query: 1 MPAALNLIAHPXXXXXXXXXXLFGPQVEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLVLAPPAXXXASKAGDGAAEAVALHH 774 MPAALNLIAHPXXXXXXXXXXLFGPQVEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLVLAPPAXXXASKAGDGAAEAVALHH Sbjct: 1 MPAALNLIAHPXXXXXXXXXXLFGPQVEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLVLAPPAXXXASKAGDGAAEAVALHH 258
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A835YU58_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU58_9STRA) HSP 1 Score: 280 bits (715), Expect = 6.070e-91 Identity = 135/211 (63.98%), Postives = 164/211 (77.73%), Query Frame = 1 Query: 79 VEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLVLAP 711 VEAYLRLT IPFTV++G GP+GK PFIELNG HADSS I+DVLAA FG +L+ GL+AQQ+A+GHA QRM EES YFH++Y+RWEDD GW ST AY G G + R++ N+V+RP+FR+ CAAQGTGR P +VVV+ FGKDM ALS+ LGE+ FLLGT APT VD+A FG LDSL N G+ T LD K+A FP LAAY +R+ +LV P Sbjct: 89 VEAYLRLTNIPFTVVYGTVAGPFGKVPFIELNGEQHADSSHIIDVLAAKFGHNLDQGLSAQQKAIGHAFQRMAEESLYFHVIYARWEDDAGWDSTFKAYIGHAGFVMRSLCNYVLRPKFRKICAAQGTGRFPPSVVVERFGKDMQALSDYLGEN-DFLLGTAAPTTVDIAVFGQLDSLFNAGVTTLLDEKVAEFPTLAAYVQRIAKLVFPP 298
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A835Z810_9STRA (GST C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z810_9STRA) HSP 1 Score: 233 bits (595), Expect = 4.810e-73 Identity = 118/209 (56.46%), Postives = 148/209 (70.81%), Query Frame = 1 Query: 76 QVEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLV 702 QVEAYLRLT IPFTV G G YGK PFIELNG HADSSTIV+VL FG DLN GL+ +QRA+GH+ QRM+EES Y+H+VYSRW+D+ G+AS +PAYFG+ G + +++++RP ++ QGTGRLP VV+D GKD+AA+S LG D F LGT PT DV F +LD L N+G+ T LDAK A F L A+ +RM L+ Sbjct: 66 QVEAYLRLTGIPFTVKFGTTVGRYGKLPFIELNGEQHADSSTIVEVLTEKFGHDLNKGLSMEQRAVGHSFQRMIEESLYWHIVYSRWQDEAGFASAVPAYFGQIGFVMHKYVDYLMRPTLVKELHGQGTGRLPPDVVLDRCGKDLAAISTYLG-DKPFFLGTAGPTYADVCIFAMLDWLFNSGVTTMLDAKAAEFMNLPAFVQRMNGLL 273
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A836CMH9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH9_9STRA) HSP 1 Score: 232 bits (591), Expect = 1.960e-70 Identity = 118/204 (57.84%), Postives = 138/204 (67.65%), Query Frame = 1 Query: 67 FGPQVEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRP-GALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAA 675 FG +VEAYLRLT PFT+ H GPYGK PFIELNG +ADSSTI+DVL AHF DLN GL+ +Q+A HAL R+ EES YF ++YSRWEDD GWA MPAY GR G TR + N V+RP+ R+ C QGTGRLP VV+D F KD+AA+ LG +L GT APT DV F LDS+ N I T LD +A FP L A Sbjct: 40 FGAKVEAYLRLTATPFTIKHTGDMGPYGKLPFIELNGKQYADSSTIIDVLNAHFNNDLNKGLSPEQKAAAHALHRLAEESIYFAMLYSRWEDDGGWAGAMPAYIGRDAGFATRFMTNWVMRPKIRKCCWGQGTGRLPPDVVIDRFAKDLAAIDAFLGSK-DYLFGTAAPTYADVVVFSQLDSIFNCNIKTILDGTIAKFPALTA 242
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: UPI0003F4EAA1 (glutathione S-transferase family protein n=2 Tax=Solimonas TaxID=413435 RepID=UPI0003F4EAA1) HSP 1 Score: 136 bits (342), Expect = 1.220e-35 Identity = 80/209 (38.28%), Postives = 117/209 (55.98%), Query Frame = 1 Query: 67 FGPQVEAYLRLTRIPFTV-IHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRM 690 F +VE +LRL + + V + GP GK P ++ +G + ADS +I++ LAA +G+DL+AGL A+QRA A +R++ E Y+ L++ RW DD GWA T F A R + + R R Q G GR PRA ++ +D+ AL++ LGE F+ G PT +D +A+G L +L + I T L +A P L AY RM Sbjct: 20 FCMKVETWLRLAGLDYRVAVQRMPNGPLGKLPVVKDDGEIIADSHSIIERLAAKYGKDLDAGLDARQRAAARAFERLINEHLYWALLHFRWIDDGGWAQTRRVLFAALPAPLRLAIGPLARRGVRAQLKGHGLGRHPRAEILRRAAQDVQALADWLGERPYFM-GAQ-PTTLDASAYGFLGNLHDAPIDTPLKGIVAAHPNLVAYCARM 226
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A6M2BXI8_9GAMM (Glutathione S-transferase family protein n=1 Tax=Solimonas terrae TaxID=1396819 RepID=A0A6M2BXI8_9GAMM) HSP 1 Score: 128 bits (322), Expect = 1.360e-32 Identity = 75/210 (35.71%), Postives = 110/210 (52.38%), Query Frame = 1 Query: 67 FGPQVEAYLRLTRIPFTVI-HGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQ 693 F + E +LRL +T++ GP GK P + + ADS I++ LAA +GRDL+AGL A+QRA+ A +R++ E Y+ LVY RW D GWA F R A R + V R Q G GR R ++ G+D+ AL++ L F+ + PT +D +A+ L ++ ++ + T L A +A P L AY RMQ Sbjct: 20 FCMKAETWLRLAGFDYTIVPQAIPNGPLGKLPAVRDGDEIIADSHNIIERLAARYGRDLDAGLDARQRAVARAFERLINEHLYWALVYFRWVDAPGWAQMRKLMFARAPAPLRLIAPLVASRGVRAQLKGHGLGRHSRDEILRRAGQDVQALADWLDAQPYFM--GERPTVLDASAYAFLANMHDSPVTTPLKAVVAAHPNLVAYCARMQ 227
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A7J6NVK2_PEROL (GST N-terminal domain-containing protein n=4 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NVK2_PEROL) HSP 1 Score: 125 bits (314), Expect = 3.000e-31 Identity = 82/219 (37.44%), Postives = 122/219 (55.71%), Query Frame = 1 Query: 67 FGPQVEAYLRLTRIPFTVIH-GPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTG-----IATCLDAKLAGFPRLAAYTRRMQQLVL 705 F ++ +L L+ +P+T+I G GPYGK P+IELNG ++ DSS IV++L+ + +DL+A L+ +Q+A+ A+QRMVEE AYF L + DG S M F A T+ + +VR R AQG GRL A D KD+A+LS LG F+ + PT VD FG L + ++T + C + + + L AY RMQ++++ Sbjct: 32 FCTKLHIWLELSGLPYTLIGVGRPDGPYGKVPYIELNGQVYGDSSAIVEMLSEKYNKDLDADLSPEQKAMSVAVQRMVEEHAYF-LSVADIALQDGAFSVMVNKFLPLSAFTKLFVPSLVRRNLRGNLNAQGIGRLSEADRSDRMKKDIASLSGILGNKKYFMCD-EKPTTVDATVFGYLWTAMSTDSELTKFSNC-EKECRKYDNLMAYFERMQEMMM 247
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A848Z2F9_9PROT (Glutathione S-transferase family protein n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848Z2F9_9PROT) HSP 1 Score: 124 bits (310), Expect = 6.480e-31 Identity = 77/211 (36.49%), Postives = 119/211 (56.40%), Query Frame = 1 Query: 76 QVEAYLRLTRIPFTVIHGPATG--PYGKAPFIELN-GALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQL 699 ++ +LR+ +P+ + A G P GK P++ + G ADS I++ L A ++ GL+ +RA A R++E+ YF V+ RW D+DGWA++ PA+FGR A R ++ ++R RQ +QGTGR ++ D AL+ LG D FLLG D P VD +A+G+L ++L + T L LA +P LAAY +R++ L Sbjct: 21 KLATWLRMAGVPYEPVTTMALGRAPKGKLPYVVTDAGETIADSGLIIEHLTASGAAAVDDGLSPVERATALAFTRLLEDHLYFIGVWFRWVDEDGWAASRPAFFGRLKAPLRLLVPPLLRRGTTRQLRSQGTGRFTADQLIALARADFGALAAQLG-DRPFLLG-DTPRTVDASAYGVLANILFPPVDTRLQRCLADYPTLAAYCQRLRAL 229
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A7J6SXV0_PEROL (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SXV0_PEROL) HSP 1 Score: 125 bits (313), Expect = 3.090e-30 Identity = 80/219 (36.53%), Postives = 121/219 (55.25%), Query Frame = 1 Query: 67 FGPQVEAYLRLTRIPFTVIH-GPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTG-----IATCLDAKLAGFPRLAAYTRRMQQLVL 705 F ++ +L L+ +P+T++ G GPYGK P+IELNG + DSS IV++L+ + +DL+A L+ +Q+A+ A+QRMVEE AYF L + DG S M F A T+ + +VR R AQG GRL A D KD+A+LS LG + + + PT VD FG L + ++T + C + + + L AY RMQ++++ Sbjct: 126 FCTKLHIWLELSGLPYTLVGVGRPDGPYGKVPYIELNGKAYGDSSAIVEMLSEKYNKDLDADLSPEQKAMSVAVQRMVEEHAYF-LSVADIALQDGAFSVMVNKFLPLSAFTKLFVPSLVRRNLRGNLNAQGIGRLSEADRSDRMKKDIASLSGILGNK-KYFISDEKPTTVDATVFGYLWTAMSTDTELTKFSNC-EKECRKYDNLMAYFERMQEMMM 341
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A0F6W727_9DELT (Uncharacterized protein n=2 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6W727_9DELT) HSP 1 Score: 119 bits (299), Expect = 2.300e-29 Identity = 79/213 (37.09%), Postives = 115/213 (53.99%), Query Frame = 1 Query: 67 FGPQVEAYLRLTRIPFTVIHGPAT-GPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGR--PGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQ 696 F ++E YLR+ IP V P GK P++E++G L DS ++D L G L+A L ++QRA+GHA++RM+EE YF ++ RW D+DG+ P FG+ P AL R +L +VR R QGTGR + +V +D+ ALS LGE +LLG D P++ D A+ +S L + + P L AY RM++ Sbjct: 7 FCTKLETYLRMAGIPHEVRPPDMRRAPKGKIPYVEIDGRLIGDSQLVIDELVRRHGDTLDAQLDSKQRAIGHAVRRMLEEGTYFTTLHLRWIDEDGFRVLRPE-FGKMFPPAL-RPLLFPMVRRSVRSALRGQGTGRHTKDEIVSFARRDLDALSAILGES-EYLLG-DRPSSYDATAYAFCESALGFPHPSGVLEHARSKPNLVAYRARMRE 215 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6632 ID=mRNA_6632|Name=jgi.p|Trimin1|163329|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=777bp|location=Sequence derived from alignment at Contig_25:337152..339004- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCCAGCCGCTCTCAACCTCATTGCGCACCCCCCACCCCCCCGTTCTCCback to top protein sequence of jgi.p|Trimin1|163329 >Trimin1|163329|e_gw1.25.33.1 ID=Trimin1|163329|e_gw1.25.33.1|Name=jgi.p|Trimin1|163329|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=259bp MPAALNLIAHPPPPRSPPPPPLFGPQVEAYLRLTRIPFTVIHGPATGPYGback to top mRNA from alignment at Contig_25:337152..339004- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6632 ID=mRNA_6632|Name=jgi.p|Trimin1|163329|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1853bp|location=Sequence derived from alignment at Contig_25:337152..339004- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_25:337152..339004- >mRNA_6632 ID=mRNA_6632|Name=jgi.p|Trimin1|163329|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=777bp|location=Sequence derived from alignment at Contig_25:337152..339004- (Tribonema minus UTEX_B_3156 )back to top |