mRNA_6632 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163329
Unique NamemRNA_6632
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A836CF98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF98_9STRA)

HSP 1 Score: 489 bits (1259), Expect = 2.310e-174
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 1
Query:    1 MPAALNLIAHPXXXXXXXXXXLFGPQVEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLVLAPPAXXXASKAGDGAAEAVALHH 774
            MPAALNLIAHPXXXXXXXXXXLFGPQVEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLVLAPPAXXXASKAGDGAAEAVALHH
Sbjct:    1 MPAALNLIAHPXXXXXXXXXXLFGPQVEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLVLAPPAXXXASKAGDGAAEAVALHH 258          
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A835YU58_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU58_9STRA)

HSP 1 Score: 280 bits (715), Expect = 6.070e-91
Identity = 135/211 (63.98%), Postives = 164/211 (77.73%), Query Frame = 1
Query:   79 VEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLVLAP 711
            VEAYLRLT IPFTV++G   GP+GK PFIELNG  HADSS I+DVLAA FG +L+ GL+AQQ+A+GHA QRM EES YFH++Y+RWEDD GW ST  AY G  G + R++ N+V+RP+FR+ CAAQGTGR P +VVV+ FGKDM ALS+ LGE+  FLLGT APT VD+A FG LDSL N G+ T LD K+A FP LAAY +R+ +LV  P
Sbjct:   89 VEAYLRLTNIPFTVVYGTVAGPFGKVPFIELNGEQHADSSHIIDVLAAKFGHNLDQGLSAQQKAIGHAFQRMAEESLYFHVIYARWEDDAGWDSTFKAYIGHAGFVMRSLCNYVLRPKFRKICAAQGTGRFPPSVVVERFGKDMQALSDYLGEN-DFLLGTAAPTTVDIAVFGQLDSLFNAGVTTLLDEKVAEFPTLAAYVQRIAKLVFPP 298          
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A835Z810_9STRA (GST C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z810_9STRA)

HSP 1 Score: 233 bits (595), Expect = 4.810e-73
Identity = 118/209 (56.46%), Postives = 148/209 (70.81%), Query Frame = 1
Query:   76 QVEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLV 702
            QVEAYLRLT IPFTV  G   G YGK PFIELNG  HADSSTIV+VL   FG DLN GL+ +QRA+GH+ QRM+EES Y+H+VYSRW+D+ G+AS +PAYFG+ G +    +++++RP   ++   QGTGRLP  VV+D  GKD+AA+S  LG D  F LGT  PT  DV  F +LD L N+G+ T LDAK A F  L A+ +RM  L+
Sbjct:   66 QVEAYLRLTGIPFTVKFGTTVGRYGKLPFIELNGEQHADSSTIVEVLTEKFGHDLNKGLSMEQRAVGHSFQRMIEESLYWHIVYSRWQDEAGFASAVPAYFGQIGFVMHKYVDYLMRPTLVKELHGQGTGRLPPDVVLDRCGKDLAAISTYLG-DKPFFLGTAGPTYADVCIFAMLDWLFNSGVTTMLDAKAAEFMNLPAFVQRMNGLL 273          
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A836CMH9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH9_9STRA)

HSP 1 Score: 232 bits (591), Expect = 1.960e-70
Identity = 118/204 (57.84%), Postives = 138/204 (67.65%), Query Frame = 1
Query:   67 FGPQVEAYLRLTRIPFTVIHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRP-GALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAA 675
            FG +VEAYLRLT  PFT+ H    GPYGK PFIELNG  +ADSSTI+DVL AHF  DLN GL+ +Q+A  HAL R+ EES YF ++YSRWEDD GWA  MPAY GR  G  TR + N V+RP+ R+ C  QGTGRLP  VV+D F KD+AA+   LG    +L GT APT  DV  F  LDS+ N  I T LD  +A FP L A
Sbjct:   40 FGAKVEAYLRLTATPFTIKHTGDMGPYGKLPFIELNGKQYADSSTIIDVLNAHFNNDLNKGLSPEQKAAAHALHRLAEESIYFAMLYSRWEDDGGWAGAMPAYIGRDAGFATRFMTNWVMRPKIRKCCWGQGTGRLPPDVVIDRFAKDLAAIDAFLGSK-DYLFGTAAPTYADVVVFSQLDSIFNCNIKTILDGTIAKFPALTA 242          
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: UPI0003F4EAA1 (glutathione S-transferase family protein n=2 Tax=Solimonas TaxID=413435 RepID=UPI0003F4EAA1)

HSP 1 Score: 136 bits (342), Expect = 1.220e-35
Identity = 80/209 (38.28%), Postives = 117/209 (55.98%), Query Frame = 1
Query:   67 FGPQVEAYLRLTRIPFTV-IHGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRM 690
            F  +VE +LRL  + + V +     GP GK P ++ +G + ADS +I++ LAA +G+DL+AGL A+QRA   A +R++ E  Y+ L++ RW DD GWA T    F    A  R  +  + R   R Q    G GR PRA ++    +D+ AL++ LGE   F+ G   PT +D +A+G L +L +  I T L   +A  P L AY  RM
Sbjct:   20 FCMKVETWLRLAGLDYRVAVQRMPNGPLGKLPVVKDDGEIIADSHSIIERLAAKYGKDLDAGLDARQRAAARAFERLINEHLYWALLHFRWIDDGGWAQTRRVLFAALPAPLRLAIGPLARRGVRAQLKGHGLGRHPRAEILRRAAQDVQALADWLGERPYFM-GAQ-PTTLDASAYGFLGNLHDAPIDTPLKGIVAAHPNLVAYCARM 226          
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A6M2BXI8_9GAMM (Glutathione S-transferase family protein n=1 Tax=Solimonas terrae TaxID=1396819 RepID=A0A6M2BXI8_9GAMM)

HSP 1 Score: 128 bits (322), Expect = 1.360e-32
Identity = 75/210 (35.71%), Postives = 110/210 (52.38%), Query Frame = 1
Query:   67 FGPQVEAYLRLTRIPFTVI-HGPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQ 693
            F  + E +LRL    +T++      GP GK P +     + ADS  I++ LAA +GRDL+AGL A+QRA+  A +R++ E  Y+ LVY RW D  GWA      F R  A  R +   V     R Q    G GR  R  ++   G+D+ AL++ L     F+   + PT +D +A+  L ++ ++ + T L A +A  P L AY  RMQ
Sbjct:   20 FCMKAETWLRLAGFDYTIVPQAIPNGPLGKLPAVRDGDEIIADSHNIIERLAARYGRDLDAGLDARQRAVARAFERLINEHLYWALVYFRWVDAPGWAQMRKLMFARAPAPLRLIAPLVASRGVRAQLKGHGLGRHSRDEILRRAGQDVQALADWLDAQPYFM--GERPTVLDASAYAFLANMHDSPVTTPLKAVVAAHPNLVAYCARMQ 227          
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A7J6NVK2_PEROL (GST N-terminal domain-containing protein n=4 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NVK2_PEROL)

HSP 1 Score: 125 bits (314), Expect = 3.000e-31
Identity = 82/219 (37.44%), Postives = 122/219 (55.71%), Query Frame = 1
Query:   67 FGPQVEAYLRLTRIPFTVIH-GPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTG-----IATCLDAKLAGFPRLAAYTRRMQQLVL 705
            F  ++  +L L+ +P+T+I  G   GPYGK P+IELNG ++ DSS IV++L+  + +DL+A L+ +Q+A+  A+QRMVEE AYF L  +     DG  S M   F    A T+  +  +VR   R    AQG GRL  A   D   KD+A+LS  LG    F+   + PT VD   FG L + ++T       + C + +   +  L AY  RMQ++++
Sbjct:   32 FCTKLHIWLELSGLPYTLIGVGRPDGPYGKVPYIELNGQVYGDSSAIVEMLSEKYNKDLDADLSPEQKAMSVAVQRMVEEHAYF-LSVADIALQDGAFSVMVNKFLPLSAFTKLFVPSLVRRNLRGNLNAQGIGRLSEADRSDRMKKDIASLSGILGNKKYFMCD-EKPTTVDATVFGYLWTAMSTDSELTKFSNC-EKECRKYDNLMAYFERMQEMMM 247          
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A848Z2F9_9PROT (Glutathione S-transferase family protein n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848Z2F9_9PROT)

HSP 1 Score: 124 bits (310), Expect = 6.480e-31
Identity = 77/211 (36.49%), Postives = 119/211 (56.40%), Query Frame = 1
Query:   76 QVEAYLRLTRIPFTVIHGPATG--PYGKAPFIELN-GALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQL 699
            ++  +LR+  +P+  +   A G  P GK P++  + G   ADS  I++ L A     ++ GL+  +RA   A  R++E+  YF  V+ RW D+DGWA++ PA+FGR  A  R ++  ++R    RQ  +QGTGR     ++     D  AL+  LG D  FLLG D P  VD +A+G+L ++L   + T L   LA +P LAAY +R++ L
Sbjct:   21 KLATWLRMAGVPYEPVTTMALGRAPKGKLPYVVTDAGETIADSGLIIEHLTASGAAAVDDGLSPVERATALAFTRLLEDHLYFIGVWFRWVDEDGWAASRPAFFGRLKAPLRLLVPPLLRRGTTRQLRSQGTGRFTADQLIALARADFGALAAQLG-DRPFLLG-DTPRTVDASAYGVLANILFPPVDTRLQRCLADYPTLAAYCQRLRAL 229          
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A7J6SXV0_PEROL (Uncharacterized protein (Fragment) n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SXV0_PEROL)

HSP 1 Score: 125 bits (313), Expect = 3.090e-30
Identity = 80/219 (36.53%), Postives = 121/219 (55.25%), Query Frame = 1
Query:   67 FGPQVEAYLRLTRIPFTVIH-GPATGPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTG-----IATCLDAKLAGFPRLAAYTRRMQQLVL 705
            F  ++  +L L+ +P+T++  G   GPYGK P+IELNG  + DSS IV++L+  + +DL+A L+ +Q+A+  A+QRMVEE AYF L  +     DG  S M   F    A T+  +  +VR   R    AQG GRL  A   D   KD+A+LS  LG    + +  + PT VD   FG L + ++T       + C + +   +  L AY  RMQ++++
Sbjct:  126 FCTKLHIWLELSGLPYTLVGVGRPDGPYGKVPYIELNGKAYGDSSAIVEMLSEKYNKDLDADLSPEQKAMSVAVQRMVEEHAYF-LSVADIALQDGAFSVMVNKFLPLSAFTKLFVPSLVRRNLRGNLNAQGIGRLSEADRSDRMKKDIASLSGILGNK-KYFISDEKPTTVDATVFGYLWTAMSTDTELTKFSNC-EKECRKYDNLMAYFERMQEMMM 341          
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Match: A0A0F6W727_9DELT (Uncharacterized protein n=2 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6W727_9DELT)

HSP 1 Score: 119 bits (299), Expect = 2.300e-29
Identity = 79/213 (37.09%), Postives = 115/213 (53.99%), Query Frame = 1
Query:   67 FGPQVEAYLRLTRIPFTVIHGPAT-GPYGKAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVEESAYFHLVYSRWEDDDGWASTMPAYFGR--PGALTRAVLNHVVRPRFRRQCAAQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGLLDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQ 696
            F  ++E YLR+  IP  V        P GK P++E++G L  DS  ++D L    G  L+A L ++QRA+GHA++RM+EE  YF  ++ RW D+DG+    P  FG+  P AL R +L  +VR   R     QGTGR  +  +V    +D+ ALS  LGE   +LLG D P++ D  A+   +S L     + +       P L AY  RM++
Sbjct:    7 FCTKLETYLRMAGIPHEVRPPDMRRAPKGKIPYVEIDGRLIGDSQLVIDELVRRHGDTLDAQLDSKQRAIGHAVRRMLEEGTYFTTLHLRWIDEDGFRVLRPE-FGKMFPPAL-RPLLFPMVRRSVRSALRGQGTGRHTKDEIVSFARRDLDALSAILGES-EYLLG-DRPSSYDATAYAFCESALGFPHPSGVLEHARSKPNLVAYRARMRE 215          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163329 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CF98_9STRA2.310e-174100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YU58_9STRA6.070e-9163.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z810_9STRA4.810e-7356.46GST C-terminal domain-containing protein n=1 Tax=T... [more]
A0A836CMH9_9STRA1.960e-7057.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI0003F4EAA11.220e-3538.28glutathione S-transferase family protein n=2 Tax=S... [more]
A0A6M2BXI8_9GAMM1.360e-3235.71Glutathione S-transferase family protein n=1 Tax=S... [more]
A0A7J6NVK2_PEROL3.000e-3137.44GST N-terminal domain-containing protein n=4 Tax=P... [more]
A0A848Z2F9_9PROT6.480e-3136.49Glutathione S-transferase family protein n=1 Tax=I... [more]
A0A7J6SXV0_PEROL3.090e-3036.53Uncharacterized protein (Fragment) n=1 Tax=Perkins... [more]
A0A0F6W727_9DELT2.300e-2937.09Uncharacterized protein n=2 Tax=Sandaracinus amylo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_25contigContig_25:337152..339004 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163329|e_gw1.25.33.1
DescriptionGlutathione S-transferase N-terminal domain
COG categoryO
Max annot lvl135614|Xanthomonadales
EggNOG OGsCOG0625@1|root,COG0625@2|Bacteria,1MX33@1224|Proteobacteria,1S4KF@1236|Gammaproteobacteria,1X74N@135614|Xanthomonadales
Evalue1.01e-36
Seed ortholog1123256.KB907925_gene1142
Hectar predicted targeting categoryother localisation
TranscriptId163651
TrackFilteredModels1
ProteinId163329
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163329gene_6632Tribonema minus UTEX_B_3156 geneContig_25 337152..339004 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163329Trimin1|163329|e_gw1.25.33.1Tribonema minus UTEX_B_3156 polypeptideContig_25 337152..339004 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6632_2exon_6632_2Tribonema minus UTEX_B_3156 exonContig_25 337152..337472 -
exon_6632_1exon_6632_1Tribonema minus UTEX_B_3156 exonContig_25 338549..339004 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6632CDS_6632Tribonema minus UTEX_B_3156 CDSContig_25 338549..339004 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6632 ID=mRNA_6632|Name=jgi.p|Trimin1|163329|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=777bp|location=Sequence derived from alignment at Contig_25:337152..339004- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCAGCCGCTCTCAACCTCATTGCGCACCCCCCACCCCCCCGTTCTCC
CCCCCCCCCCCCCCTCTTTGGGCCTCAGGTGGAGGCGTACCTGCGGCTGA
CGCGCATCCCCTTCACCGTCATCCACGGCCCCGCCACCGGCCCGTACGGC
AAGGCGCCCTTCATCGAGCTCAACGGCGCGCTGCACGCCGACTCGAGCAC
GATCGTGGACGTCCTCGCCGCCCACTTCGGCCGCGACCTCAACGCGGGCC
TCACCGCTCAGCAGCGCGCCCTCGGCCACGCGCTGCAGCGCATGGTCGAA
GAGTCGGCGTACTTCCACCTCGTCTACTCGCGCTGGGAGGACGACGACGG
CTGGGCCAGCACGATGCCGGCGTACTTCGGGCGCCCGGGCGCGCTGACAC
GCGCAGTGCTCAACCACGTCGTGCGGCCGCGCTTCCGGCGGCAGTGCGCG
GCGCAGGGCACAGGCCGCCTCCCGCGCGCCGTCGTGGTGGACTGCTTCGG
CAAGGACATGGCGGCGCTCAGCGAGTGCCTCGGCGAAGACGGCAGCTTCC
TGCTGGGCACTGACGCGCCCACGGCCGTTGACGTCGCCGCCTTCGGCCTG
CTTGACTCCCTGCTCAACACAGGCATCGCGACGTGCCTCGACGCCAAGCT
CGCCGGGTTCCCGCGCCTCGCGGCGTACACGCGGCGCATGCAGCAGCTGG
TCCTCGCGCCGCCCGCCGCCGCCGCCGCGTCGAAGGCCGGGGACGGCGCC
GCAGAAGCGGTCGCGCTACACCACTAG
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protein sequence of jgi.p|Trimin1|163329

>Trimin1|163329|e_gw1.25.33.1 ID=Trimin1|163329|e_gw1.25.33.1|Name=jgi.p|Trimin1|163329|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=259bp
MPAALNLIAHPPPPRSPPPPPLFGPQVEAYLRLTRIPFTVIHGPATGPYG
KAPFIELNGALHADSSTIVDVLAAHFGRDLNAGLTAQQRALGHALQRMVE
ESAYFHLVYSRWEDDDGWASTMPAYFGRPGALTRAVLNHVVRPRFRRQCA
AQGTGRLPRAVVVDCFGKDMAALSECLGEDGSFLLGTDAPTAVDVAAFGL
LDSLLNTGIATCLDAKLAGFPRLAAYTRRMQQLVLAPPAAAAASKAGDGA
AEAVALHH*
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mRNA from alignment at Contig_25:337152..339004-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6632 ID=mRNA_6632|Name=jgi.p|Trimin1|163329|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1853bp|location=Sequence derived from alignment at Contig_25:337152..339004- (Tribonema minus UTEX_B_3156 )
ATGCCAGCCGCTCTCAACCTCATTGCGCACCCCCCACCCCCCCGTTCTCC CCCCCCCCCCCCCCTCTTTGGGCCTCAGGTGGAGGCGTACCTGCGGCTGA CGCGCATCCCCTTCACCGTCATCCACGGCCCCGCCACCGGCCCGTACGGC AAGGCGCCCTTCATCGAGCTCAACGGCGCGCTGCACGCCGACTCGAGCAC GATCGTGGACGTCCTCGCCGCCCACTTCGGCCGCGACCTCAACGCGGGCC TCACCGCTCAGCAGCGCGCCCTCGGCCACGCGCTGCAGCGCATGGTCGAA GAGTCGGCGTACTTCCACCTCGTCTACTCGCGCTGGGAGGACGACGACGG CTGGGCCAGCACGATGCCGGCGTACTTCGGGCGCCCGGGCGCGCTGACAC GCGCAGTGCTCAACCACGTCGTGCGGCCGCGCTTCCGGCGGCAGTGCGCG GCGCAGGTGCGTCGCCGCGCGCGCTGTGTGCTTGAAGTAGCTGCATTGAA GTGGTAGTGGCAGGGCAGGCGCGTGTGTGTGTGCAGCGCTCAACAGCATC TCGCGGCCGCAGTTCCGCGAGCCGTGCGTGGCGCGTGCGCGTCGTGTTGC GGTTGTGGAGCGGCAGTGACACGTGCAGTGGTCGACTGCGTGGTGTGCCA CGGGTCCCCGAGCAGTGCGCAACACGGGCGCGTCATGCTGCCAGGTGGCG GCCGTGACAGCAGTGCTCCACGGTGCGGGCAGTGCGTGGCGCAGGTGTGC GGTGCGGCCCGTCCTGACGGCGTGCACGCTGGCGTGTACGTGTCTGGGCG CACGGGCGCTGCGCATCGTTGCCTGGCGTTGCACCATTGAGGTGGTGTGA ATGAATAGGTTCAGCTCGTGATCGTTGGGGGGTACTTGTGTGAGCGCCAA GCGCGTGCGTGTCTATGGGGAAATACTACTTCACGAGAAGGCGTCAACAG ACAGTAGTTCTCCCCTCCCCCCCGCATGGCGCACAGTGGAAGTCACACTA TCGGCCTTGAGCCGTCATGATGATGTGCGCTACCAAGCACATGTGCGCTG TGGAATCCCTGCCAGCATGAACATTACGGGTACCGTGGACATGCACTCAC ACCCTAGCCAGTCAATTATCTCATGGCATCGACACGCTGTGATGGCGTGA GCGCCACAACGGCAGTCCCAGCAGTTCCTCACTTTCCAGTGCATGCGTGG GCGGGACCCGCCTTTCTCCGTCTCATGGGCTAACGACCAGGGTCATGTGA TGCAACGGCAACGCGACGCAGCATGTACACGGCTCCTTGGCACTATGCTG AGCCGTGATCGCGTCAGCAGTTGATGCAACCCCCCCCCCCCCCCTCCCCC CGCCCCGCTCCCCGCACGCCCACTGGCCAGCGATGCGCGCCAGGCGTCAC AGTTCGCTGCAGCAGTGCCCACCACCCTCAACCCTTTGCACGCGCGCATC GTGCTGCTGCAGCAGTCGCTCACCGCGCTCGCATCTGCATTGGCCGCCGC CGCTGCCGCTGCGCGTCGCGCGCGCTACGCAGGGCACAGGCCGCCTCCCG CGCGCCGTCGTGGTGGACTGCTTCGGCAAGGACATGGCGGCGCTCAGCGA GTGCCTCGGCGAAGACGGCAGCTTCCTGCTGGGCACTGACGCGCCCACGG CCGTTGACGTCGCCGCCTTCGGCCTGCTTGACTCCCTGCTCAACACAGGC ATCGCGACGTGCCTCGACGCCAAGCTCGCCGGGTTCCCGCGCCTCGCGGC GTACACGCGGCGCATGCAGCAGCTGGTCCTCGCGCCGCCCGCCGCCGCCG CCGCGTCGAAGGCCGGGGACGGCGCCGCAGAAGCGGTCGCGCTACACCAC TAG
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Coding sequence (CDS) from alignment at Contig_25:337152..339004-

>mRNA_6632 ID=mRNA_6632|Name=jgi.p|Trimin1|163329|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=777bp|location=Sequence derived from alignment at Contig_25:337152..339004- (Tribonema minus UTEX_B_3156 )
ATGCCAGCCGCTCTCAACCTCATTGCGCACCCCCCACCCCCCCGTTCTCC
CCCCCCCCCCCCCCTCTTTGGGCCTCAGGTGGAGGCGTACCTGCGGCTGA
CGCGCATCCCCTTCACCGTCATCCACGGCCCCGCCACCGGCCCGTACGGC
AAGGCGCCCTTCATCGAGCTCAACGGCGCGCTGCACGCCGACTCGAGCAC
GATCGTGGACGTCCTCGCCGCCCACTTCGGCCGCGACCTCAACGCGGGCC
TCACCGCTCAGCAGCGCGCCCTCGGCCACGCGCTGCAGCGCATGGTCGAA
GAGTCGGCGTACTTCCACCTCGTCTACTCGCGCTGGGAGGACGACGACGG
CTGGGCCAGCACGATGCCGGCGTACTTCGGGCGCCCGGGCGCGCTGACAC
GCGCAGTGCTCAACCACGTCGTGCGGCCGCGCTTCCGGCGGCAGTGCGCG
GCGCAGGGCACAGGCCGCCTCCCGCGCGCCGTCGTGGTGGACTGCTTCGG
CAAGGACATGGCGGCGCTCAGCGAGTGCCTCGGCGAAGACGGCAGCTTCC
TGCTGGGCACTGACGCGCCCACGGCCGTTGACGTCGCCGCCTTCGGCCTG
CTTGACTCCCTGCTCAACACAGGCATCGCGACGTGCCTCGACGCCAAGCT
CGCCGGGTTCCCGCGCCTCGCGGCGTACACGCGGCGCATGCAGCAGCTGG
TCCTCGCGCCGCCCGCCGCCGCCGCCGCGTCGAAGGCCGGGGACGGCGCC
GCAGAAGCGGTCGCGCTACACCACTAG
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