mRNA_6602 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|163394 vs. uniprot
Match: A0A836CHY9_9STRA (Beta-lactamase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHY9_9STRA) HSP 1 Score: 553 bits (1424), Expect = 6.030e-199 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1 Query: 1 CCEVIPVPVLQDNYAYLVIDKATQMTACVDPAEPRKVLAAAAARGVTLSTLLCTHKHADHAGGNAEMARRVPGLSVVGSALEDAVPAVTRALRDGETVELGELIVKSVHTPCHTRGHAAFLVTHRDGDTHGAPVLFSGDTLFVGGCGRFFEGDAQDMLKSLGPGGSLWDLPLETRVYCGHEYTVSNLEFAATIEPDNAVLRAKLEWAKDMVADGQPTIPSTIGEELAYNPFMRTNVPEVMAAVGASTPVECMAALRARKDVFRPPPSDASRFPRL 825 CCEVIPVPVLQDNYAYLVIDKATQMTACVDPAEPRKVLAAAAARGVTLSTLLCTHKHADHAGGNAEMARRVPGLSVVGSALEDAVPAVTRALRDGETVELGELIVKSVHTPCHTRGHAAFLVTHRDGDTHGAPVLFSGDTLFVGGCGRFFEGDAQDMLKSLGPGGSLWDLPLETRVYCGHEYTVSNLEFAATIEPDNAVLRAKLEWAKDMVADGQPTIPSTIGEELAYNPFMRTNVPEVMAAVGASTPVECMAALRARKDVFRPPPSDASRFPRL Sbjct: 1 CCEVIPVPVLQDNYAYLVIDKATQMTACVDPAEPRKVLAAAAARGVTLSTLLCTHKHADHAGGNAEMARRVPGLSVVGSALEDAVPAVTRALRDGETVELGELIVKSVHTPCHTRGHAAFLVTHRDGDTHGAPVLFSGDTLFVGGCGRFFEGDAQDMLKSLGPGGSLWDLPLETRVYCGHEYTVSNLEFAATIEPDNAVLRAKLEWAKDMVADGQPTIPSTIGEELAYNPFMRTNVPEVMAAVGASTPVECMAALRARKDVFRPPPSDASRFPRL 275
BLAST of jgi.p|Trimin1|163394 vs. uniprot
Match: U6LPG6_9EIME (Hydroxyacylglutathione hydrolase, putative n=1 Tax=Eimeria brunetti TaxID=51314 RepID=U6LPG6_9EIME) HSP 1 Score: 302 bits (773), Expect = 3.040e-98 Identity = 157/269 (58.36%), Postives = 192/269 (71.38%), Query Frame = 1 Query: 1 CCEVIPVPVLQDNYAYLVIDKATQMTACVDPAEPRKVLAAAAARGVTLSTLLCTHKHADHAGGNAEMARRVPGLSVVGSALEDAVPAVTRALRDGETVELGELIVKSVHTPCHTRGHAAFLVTHRDGDTHGAPVLFSGDTLFVGGCGRFFEGDAQDM----LKSLGPGGSLWDLPLETRVYCGHEYTVSNLEFAATIEPDNAVLRAKLEWAKDMVADGQPTIPSTIGEELAYNPFMRTNVPEVMAAVGA--STPVECMAALRARKDVFR 789 C EVIPVP L DNYAYL+IDK T+ ACVDPAEP KV+AAA GVTLS LCTH+H DH+GGN ++ + VPGL VVGSA E+ P T+A+ +GET +G+L+VK +H PCHT GH + V R D + PVLF+GDTLF+ GCGRFFEGDAQ M +K++GP LP ET VYCGHEY+V+NL+FA TIEP N L++KLEWA+ G+PTIPS+IGEE YNPFMR + P+V AVGA V+ M LR RK+ FR Sbjct: 128 CAEVIPVPTLSDNYAYLLIDKKTKTAACVDPAEPEKVIAAAKEHGVTLSMCLCTHRHYDHSGGNEQIKKLVPGLEVVGSAYEET-PGRTKAVTEGETFRIGDLLVKVLHAPCHTIGHVLYYVESRS-DVNAKPVLFTGDTLFLAGCGRFFEGDAQQMHKALMKTIGP------LPDETLVYCGHEYSVANLKFALTIEPQNIALQSKLEWAEKQREAGRPTIPSSIGEEKGYNPFMRVDKPQVQRAVGAPQGDEVQTMHILRDRKNTFR 388
BLAST of jgi.p|Trimin1|163394 vs. uniprot
Match: U6GPJ8_EIMAC (Hydroxyacylglutathione hydrolase, putative n=1 Tax=Eimeria acervulina TaxID=5801 RepID=U6GPJ8_EIMAC) HSP 1 Score: 294 bits (752), Expect = 7.020e-96 Identity = 150/268 (55.97%), Postives = 191/268 (71.27%), Query Frame = 1 Query: 1 CCEVIPVPVLQDNYAYLVIDKATQMTACVDPAEPRKVLAAAAARGVTLSTLLCTHKHADHAGGNAEMARRVPGLSVVGSALEDAVPAVTRALRDGETVELG---ELIVKSVHTPCHTRGHAAFLVTHRDGDTHGAPVLFSGDTLFVGGCGRFFEGDAQDMLKSLGPGGSLWDLPLETRVYCGHEYTVSNLEFAATIEPDNAVLRAKLEWAKDMVADGQPTIPSTIGEELAYNPFMRTNVPEVMAAVGA--STPVECMAALRARKDVFR 789 C EVIPVP L DNYAYL+ID+ T ACVDPAEP KV+AAA RGVTL T LCTH+H DH+GGN ++ + VPG+ V+GSA E+ P T+A+ DG+T LG +L VK +H PCHT GH + + R D + P++F+GDTLF+ GCGRFFEG+AQ M +L ++ LP ET VYCGHEYT++NL+FAAT+EP+N L+ KLEWA+ G+PT+PS+IGEE AYNPFMR + PEV AVGA ++ M LR RK+ FR Sbjct: 66 CAEVIPVPTLSDNYAYLLIDRKTNTAACVDPAEPEKVVAAAKERGVTLETCLCTHRHFDHSGGNEQIKKLVPGIEVIGSAYEET-PGRTKAVTDGDTFRLGKFSDLQVKVLHAPCHTIGHLLYYLESRT-DVNAKPIIFTGDTLFLAGCGRFFEGNAQQMHHALMK--TIGSLPAETLVYCGHEYTIANLKFAATVEPNNFALQNKLEWAQKQQISGKPTVPSSIGEEKAYNPFMRVDRPEVQKAVGAPEGDEIQTMHILRERKNTFR 329
BLAST of jgi.p|Trimin1|163394 vs. uniprot
Match: A0A6P6RS00_9EIME (hydroxyacylglutathione hydrolase cytoplasmic n=2 Tax=Cyclospora cayetanensis TaxID=88456 RepID=A0A6P6RS00_9EIME) HSP 1 Score: 288 bits (738), Expect = 1.340e-94 Identity = 152/265 (57.36%), Postives = 187/265 (70.57%), Query Frame = 1 Query: 1 CCEVIPVPVLQDNYAYLVIDKATQMTACVDPAEPRKVLAAAAARGVTLSTLLCTHKHADHAGGNAEMARRVPGLSVVGSALEDAVPAVTRALRDGETVELGELIVKSVHTPCHTRGHAAFLVTHRDGDTHGAPVLFSGDTLFVGGCGRFFEGDAQDMLKSLGPGGSLWDLPLETRVYCGHEYTVSNLEFAATIEPDNAVLRAKLEWAKDMVADGQPTIPSTIGEELAYNPFMRTNVPEVMAAVGA--STPVECMAALRARKDVFR 789 C EVI VP L DNYAY++IDK T+ ACVDPAEP KV+AAA R VTL LCTHKHADH+GGN + + VP + V SA ED P TRA+ DGE+ +G+L VK +H PCHT GH + + R D + P++F+GDTLF+ GCGRFFEGDA M ++L S+ LP ET VYCGHEY+VSNL FAA+IEP+N L AKLEWA+ A+G+PTIPS+IGEE AYNPFMR + E+ AVGA V+ M LR RK++FR Sbjct: 10 CAEVILVPTLSDNYAYVIIDKKTKAAACVDPAEPEKVVAAAKERDVTLRACLCTHKHADHSGGNERIKQLVPDIEVFCSAYEDT-PGRTRAVYDGESFRIGDLHVKVMHAPCHTSGHVLYYMESRT-DMNANPIIFTGDTLFLAGCGRFFEGDATQMHRALMK--SIAALPAETLVYCGHEYSVSNLRFAASIEPNNMALEAKLEWAQKQRAEGRPTIPSSIGEEKAYNPFMRCDRREIQKAVGAPEGDEVQTMHILRERKNMFR 270
BLAST of jgi.p|Trimin1|163394 vs. uniprot
Match: A0A4D9D9B9_9STRA (Lactamase_B domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9B9_9STRA) HSP 1 Score: 282 bits (721), Expect = 1.190e-91 Identity = 154/274 (56.20%), Postives = 184/274 (67.15%), Query Frame = 1 Query: 1 CCEVIPVPVLQDNYAYLVIDKATQMTACVDPAEPRKVLAAAAARGVTLSTLLCTHKHADHAGGNAEMARRVPGLSVVGSALEDAVPAVTRALRDGETVELGELIVKSVHTPCHTRGHAAFLVTHRD-----GDTHGAPVLFSGDTLFVGGCGRFFEGDAQDMLKSLGPGGSLWDLPLETRVYCGHEYTVSNLEFAATIEPDNAVLRAKLEWAKDMVADGQPTIPSTIGEELAYNPFMRTNVPEVMAAV----GAS--TPVECMAALRARKDVFR 789 C VIPVP+L DN+AYLV+D T ACVDPAEP KVLAAA G+ LSTLLCTHKH DHAGGN EM R +PGL VV + ED +PA T L D + LG L V++++TPCHT+GH FLVT +D G + APVLFSGDTLFVGGCGRFFEGD M+++L G + L ET VYCGHEYT SNL FA ++EP+NA LRAK+ + GQPT+PST+G EL NPFMR V+ A GA+ PV M ALR K+ F+ Sbjct: 26 CARVIPVPILSDNFAYLVVDPQTGKAACVDPAEPAKVLAAAQREGIKLSTLLCTHKHWDHAGGNEEMVRMLPGLEVVTTKFED-IPAATIRLGDDDVYTLGSLSVRAIYTPCHTKGHVLFLVTPQDEADSPGTSPTAPVLFSGDTLFVGGCGRFFEGDGAQMVEALM--GRVASLSPETLVYCGHEYTQSNLAFALSVEPENAALRAKIAVTTAALHSGQPTVPSTVGSELEINPFMRVGEAAVIKAAREKGGAAGEDPVSVMTALREMKNNFK 296
BLAST of jgi.p|Trimin1|163394 vs. uniprot
Match: U6M2G0_EIMMA (Hydroxyacylglutathione hydrolase, putative (Fragment) n=1 Tax=Eimeria maxima TaxID=5804 RepID=U6M2G0_EIMMA) HSP 1 Score: 274 bits (700), Expect = 1.500e-89 Identity = 133/224 (59.38%), Postives = 169/224 (75.45%), Query Frame = 1 Query: 1 CCEVIPVPVLQDNYAYLVIDKATQMTACVDPAEPRKVLAAAAARGVTLSTLLCTHKHADHAGGNAEMARRVPGLSVVGSALEDAVPAVTRALRDGETVELGELIVKSVHTPCHTRGHAAFLVTHRDGDTHGAPVLFSGDTLFVGGCGRFFEGDAQDMLKSLGPGGSLWDLPLETRVYCGHEYTVSNLEFAATIEPDNAVLRAKLEWAKDMVADGQPTIPSTIGE 672 C EV+PVP L DNYAYL+IDK T+ ACVDPAEP KV+AAA GVTL T LCTH+H DH+GGN ++ + VPG+ VVGSA E+ P TRA+ DGET LG+L+VK +H PCHT GH + V R D + P++F+GDTLF+ GCGRFFEGDAQ M ++L ++ LP ET VYCGHEYTV+NL+FAA++EP+N L++KLEWAK + G+PT+PS+IGE Sbjct: 3 CAEVVPVPTLSDNYAYLLIDKKTKTAACVDPAEPEKVVAAAKEHGVTLETCLCTHRHFDHSGGNEKIKKLVPGIEVVGSAYEET-PGRTRAVTDGETFRLGDLLVKVLHAPCHTSGHVLYYVESRS-DMNAKPIIFTGDTLFLAGCGRFFEGDAQQMHRALIK--TIGSLPAETLVYCGHEYTVTNLKFAASVEPNNIALQSKLEWAKKQESAGKPTVPSSIGE 222
BLAST of jgi.p|Trimin1|163394 vs. uniprot
Match: A0A061D7E1_BABBI (Hydroxyacylglutathione hydrolase, putative n=2 Tax=Babesia TaxID=5864 RepID=A0A061D7E1_BABBI) HSP 1 Score: 275 bits (703), Expect = 1.330e-88 Identity = 144/262 (54.96%), Postives = 178/262 (67.94%), Query Frame = 1 Query: 1 CCEVIPVPVLQDNYAYLVIDKATQMTACVDPAEPRKVLAAAAARGVTLSTLLCTHKHADHAGGNAEMARRVPGLSVVGSALEDAVPAVTRALRDGETVELGELIVKSVHTPCHTRGHAAFLVTHRDGDTHGAPVLFSGDTLFVGGCGRFFEGDAQDMLKSLGPGGSLWDLPLETRVYCGHEYTVSNLEFAATIEPDNAVLRAKLEWAKDMVADGQPTIPSTIGEELAYNPFMRTNVPEVMAAVGASTPVECMAALRARKDVF 786 C EV+PVPV DNYAYL+++ T CVDPAEPR VL AA R +TL+ LCTHKH DH+GGN E+ R VPG++V GS+ E AVP VT L DGE + LG L VK V CHT GH + V++ D P++F+GDT+F+ GCGRFFEG A +ML + L P ET +YCGHEYTV NL+FA T++P AVLR KLEWA+ + A G PT+PST+GEEL YNPFMR++ E+M VG ST M LR+ KD F Sbjct: 67 CAEVVPVPVFSDNYAYLLVEHGTTNAFCVDPAEPRTVLQAAGERQLTLTAALCTHKHYDHSGGNTEIQRLVPGITVYGSSYE-AVPGVTHGLMDGEVIRLGSLEVKGVRAACHTVGHMMYYVSNPS-DPSTQPIMFTGDTVFIAGCGRFFEGSAANMLDIMN---KLRAYPKETLIYCGHEYTVKNLQFAKTVDPSAAVLR-KLEWAERVRAQGMPTVPSTLGEELEYNPFMRSS--ELMGTVGESTEEGAMRKLRSMKDRF 320
BLAST of jgi.p|Trimin1|163394 vs. uniprot
Match: A0A0G4FIB7_VITBC (Lactamase_B domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FIB7_VITBC) HSP 1 Score: 274 bits (701), Expect = 1.820e-88 Identity = 139/272 (51.10%), Postives = 190/272 (69.85%), Query Frame = 1 Query: 1 CCEVIPVPVL---QDNYAYLVIDKATQMTACVDPAEPRKVLAAAAARGVTLSTLLCTHKHADHAGGNAEMARRVPGLSVVGSALEDAVPAVTRALRDGETVELGELIVKSVHTPCHTRGHAAFLVTHRDGDTHGAPVLFSGDTLFVGGCGRFFEGDAQDMLKSLGPGGSLWDLPLETRVYCGHEYTVSNLEFAATIEPDNAVLRAKLEWAKDMVADGQPTIPSTIGEELAYNPFMRTNVPEVMAAVGA-------STPVECMAALRARKDVF 786 C +VIPVP+L +NY YL++D+ T+ ACVDP EP+K+L+AAA G T+ TLLCTHKH DH+GGN EMA VPG+ V+ +A ED +PAVT+ ++DG+T ++G L +K++HTPCHTRGH F VT RD + P+LF+GDTLFV GCGRFFEG+A +M ++L G + LP ET++YCGHEYT +N++FA +++P NA L++ +W D + G T+PSTI +EL+ NPFMR + P ++ A A S V M LR KD F Sbjct: 42 CADVIPVPLLTGTSNNYGYLLVDRETKRAACVDPVEPKKLLSAAADAGATIDTLLCTHKHWDHSGGNKEMASLVPGIEVISTAYED-IPAVTKTMKDGDTHQMGSLTIKALHTPCHTRGHILFYVTKRDSNE--TPILFTGDTLFVCGCGRFFEGEASEMFRALK--GVIGSLPPETKLYCGHEYTRNNVKFALSVDPANASLQSLAQWVDDTLKKGAYTVPSTIQQELSTNPFMRVDQPALIQAARAQDMTADESRDVFVMKRLREMKDSF 308
BLAST of jgi.p|Trimin1|163394 vs. uniprot
Match: A0A6H5L1C0_9PHAE (Lactamase_B domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1C0_9PHAE) HSP 1 Score: 275 bits (703), Expect = 2.360e-88 Identity = 138/227 (60.79%), Postives = 168/227 (74.01%), Query Frame = 1 Query: 1 CCEVIPVPVLQDNYAYLVIDKATQMTACVDPAEPRKVLAAAAARGVTLSTLLCTHKHADHAGGNAEMARRVPGLSVVGSALEDAVPAVTRALRDGETVELGELIVKSVHTPCHTRGHAAFLVTH------RDGDTHGAPVLFSGDTLFVGGCGRFFEGDAQDMLKSLGPGGSLWDLPLETRVYCGHEYTVSNLEFAATIEPDNAVLRAKLEWAKDMVADGQPTIPST 663 C EVIPVP+L DNYAYL+ID AT+ TACVDPAEP KV+AAA ARGV +STLLCTHKH DH+GGN M + +P L VV SA ED VPA+T AL+D E LG L V+++HTPCHTRGH F VT +GD AP++FSGDTLFVGGCGRFFEGDA M +L G LP TRV+CGHEYTVSNL+FA ++EP+N+ + KL+W++ ++A G T+PST Sbjct: 106 CAEVIPVPILSDNYAYLLIDPATKKTACVDPAEPEKVIAAAQARGVEISTLLCTHKHWDHSGGNEAMKQMIPDLEVVSSAYEDGVPAMTLALKDREEYALGSLTVRALHTPCHTRGHVLFFVTSPAAGAGEEGDGAAAPLVFSGDTLFVGGCGRFFEGDASQMSNALQ--GVAASLPGATRVFCGHEYTVSNLQFAKSVEPENSAVLDKLDWSRRVLAKGGYTVPST 330
BLAST of jgi.p|Trimin1|163394 vs. uniprot
Match: D8RSK7_SELML (Lactamase_B domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RSK7_SELML) HSP 1 Score: 265 bits (676), Expect = 2.110e-85 Identity = 136/262 (51.91%), Postives = 178/262 (67.94%), Query Frame = 1 Query: 7 EVIPVPVLQDNYAYLVIDKATQMTACVDPAEPRKVLAAAAARGVTLSTLLCTHKHADHAGGNAEMARRVPGLSVVGSALEDAVPAVTRALRDGETVELGELI-VKSVHTPCHTRGHAAFLVTHRDGDTHGAPVLFSGDTLFVGGCGRFFEGDAQDMLKSLGPGGSLWDLPLETRVYCGHEYTVSNLEFAATIEPDNAVLRAKLEWAKDMVADGQPTIPSTIGEELAYNPFMRTNVPEVMAAVGASTPVECMAALRARKDVFR 789 EVIPVP L DNYAYL+ID A++ A VDP +P VL+AA G ++ +L THKH DHAGGN E+ + VPG+ V G A +D V T L G +EL + + +K++HTPCHT+GH ++ VTH+ GD P +F+GDTLFV GCG+FFEG AQDM SL L +LP TRV+CGHEYT NL+FA +++P N L+ K+ W ++ + +PT+PSTI EEL NPFMR NV E +G S PVE +A+LRA KD F+ Sbjct: 2 EVIPVPCLDDNYAYLIIDGASKQAAAVDPVKPESVLSAAKKHGAQVTMVLTTHKHWDHAGGNNEIKKLVPGIKVFGGA-KDNVEGCTDPLEHGAELELSKDVKIKALHTPCHTKGHISYFVTHKSGD----PAVFTGDTLFVAGCGKFFEGKAQDMYHSLSE--VLAELPPATRVFCGHEYTAKNLKFAMSVDPHNDALKQKVAWTEEQRRNDKPTVPSTIREELQTNPFMRVNVKEFQVHMGESDPVELLASLRAAKDQFK 256 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163394 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6602 ID=mRNA_6602|Name=jgi.p|Trimin1|163394|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=828bp|location=Sequence derived from alignment at Contig_25:113640..117115+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TGCTGCGAGGTGATCCCCGTGCCGGTGCTGCAGGACAACTACGCCTACCTback to top protein sequence of jgi.p|Trimin1|163394 >Trimin1|163394|e_gw1.25.106.1 ID=Trimin1|163394|e_gw1.25.106.1|Name=jgi.p|Trimin1|163394|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=276bp CCEVIPVPVLQDNYAYLVIDKATQMTACVDPAEPRKVLAAAAARGVTLSTback to top mRNA from alignment at Contig_25:113640..117115+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6602 ID=mRNA_6602|Name=jgi.p|Trimin1|163394|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3476bp|location=Sequence derived from alignment at Contig_25:113640..117115+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_25:113640..117115+ >mRNA_6602 ID=mRNA_6602|Name=jgi.p|Trimin1|163394|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=828bp|location=Sequence derived from alignment at Contig_25:113640..117115+ (Tribonema minus UTEX_B_3156 )back to top |