mRNA_6572 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: A0A836CBJ6_9STRA (Fido domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBJ6_9STRA) HSP 1 Score: 621 bits (1602), Expect = 2.070e-225 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1 Query: 1 MVRKWQGPVSTCYVPWDADADWPFVLYSVHEGLKRGRRDHEYFTEFFDNSIAAMVYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHINDDLTVDIICECHRIMMEGSTSYGVPTKSTLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTERDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGRRQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENLRVAGFNK 885 MVRKWQGPVSTCYVPWDADADWPFVLYSVHEGLKRGRRDHEYFTEFFDNSIAAMVYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHINDDLTVDIICECHRIMMEGSTSYGVPTKSTLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTERDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGRRQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENLRVAGFNK Sbjct: 1 MVRKWQGPVSTCYVPWDADADWPFVLYSVHEGLKRGRRDHEYFTEFFDNSIAAMVYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHINDDLTVDIICECHRIMMEGSTSYGVPTKSTLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTERDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGRRQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENLRVAGFNK 295
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: A0A0S4KL28_BODSA (Cell division protein, Fic-like, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4KL28_BODSA) HSP 1 Score: 182 bits (461), Expect = 1.380e-51 Identity = 108/306 (35.29%), Postives = 167/306 (54.58%), Query Frame = 1 Query: 4 VRKWQGPVSTCYVPWDAD------ADWPFVLYSVHEGLKRGRRDH-EYFTEFFDNSIAAMVYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHINDDLTVDIICECHRIMMEGS---TSYGVPTKSTLRT---ELANAGFYVFIAPEHIRRGLQMMLSAYKTERDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGRRQHYLHAINTAR-IPV--IGSRKELNCILLLSCQRGLGNYFENLRVA 873 VR + +V W+ D W ++ + + ++ + F ++A ++ +N+LE T+ EG T I F++G PE+ W++EGGR+ SS+RQL+Q AAA +L ++ + LTV ++ E HRIMMEGS + LR+ E AG + FIAP+ + + ++ Y+ R+ P LAT LFY ITIHPF+NGNGRLCR+++++SLMRDGF F +S S+G R HY+ AIN AR +P + ELN + L+S +R + N+ N+ +A Sbjct: 30 VRTGKPATPVTHVGWEKDDAEYQNKKWEDLITLMPTAIDEANDENADTIQRFLKRAMAVFIFDANRLEGTISSLHREGTTVRAILGFLNGTISAPEAVPWNSEGGREPNSPSSKRQLFQAAAAALYLLRDNASSPLTVGLLRETHRIMMEGSFVDDEDNMLAAGVLRSQPEEEVCAGLWQFIAPDEVLNAVTNLVKRYEQLREENHCPVALATHLFYYLITIHPFMNGNGRLCRMMLAWSLMRDGFPFPVSLSSGRAAARDHYMQAINCARGMPRDDVSPFSELNVMTLVSMERVISNFLGNIAIA 335
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: D8U8M4_VOLCA (Fic protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U8M4_VOLCA) HSP 1 Score: 115 bits (287), Expect = 6.930e-25 Identity = 88/305 (28.85%), Postives = 148/305 (48.52%), Query Frame = 1 Query: 1 MVRKWQGPVSTCY-VPWDADAD---WPFVLYSVHE--GLKRGRRDHEYFTEFFDNSIAAMVYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHI---NDDLTVDIICECHRIMMEGSTSYG--VPTKSTLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTERDRGMH-PTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDG--FLFYLSFSTGHKGRRQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENLRVA 873 M +G S Y PW+ D W V + E ++ G + E + S+ ++ SN +E + + +T +++ + G++ P + + G+ S + + Q+ A FL ++HI LT ++ + H+I+M+G + + R+ +ANAG+++F P + R L ++L Y P LA L Y+F++IHPF +GNGR+CRLL++ L+ G F L FS+GH+ +Q YL +I AR G K L I+L S + L +FE LRV+ Sbjct: 661 MSPAGKGEHSNYYECPWEEDNPELVWTQVEVYLREIKKIQPGGKAAELLQSHAEWSVLCSIFFSNLIEGK---GLSQSNTASLVRAILQGQQSLPSNSSSSNKRGK-----KSAQDVTQHAVAFVFL-KQHIVVEKKKLTPQVVLDAHKILMDGMVREDGLAISAGSYRSTIANAGYHLFPPPASVERSLAVLLEEYNERAASSEEDPFALAAWLSYEFVSIHPFEDGNGRMCRLLLNMVLLSFGVPFCSALGFSSGHRQAKQQYLQSIQNARKHG-GLPKRLAFIVLCSIRSSLAAFFETLRVS 955
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: D8U312_VOLCA (Fic protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U312_VOLCA) HSP 1 Score: 108 bits (271), Expect = 3.980e-24 Identity = 78/250 (31.20%), Postives = 132/250 (52.80%), Query Frame = 1 Query: 148 SIAAMVYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHI---NDDLTVDIICECHRIMMEGSTSY-GVPTKS-TLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTER-DRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDG--FLFYLSFSTGHKGRRQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENLRVA 873 S+ ++ SN++E + +T +++K + G+ P + + G S ++ Q+ AA FL ++H+ LT DI+ H+I+M+G G P + + R LA+AGF+ F+ PE ++ L +L+ Y P LA L Y+F+TIHPF +GNGR+CRLL++ L+ G F L FS+GH+ +Q Y++ I+ A+ G K L ++L S + L +FE +R++ Sbjct: 53 SVICSIFFSNQIEGA---GLGLSNTASLVRKILQGQPLDP-CLLYSSSGS----SGKSTCEVVQHAAAFIFL-KQHVVVEKKPLTPDIVLAAHKILMDGMVCEDGKPVNAGSYRDSLAHAGFHRFLHPELVQPSLVRLLANYNARAASETEDPFALAAWLSYEFVTIHPFEDGNGRMCRLLLNMVLLSHGVPFCSALGFSSGHRRAKQQYMNCIHKAQQHG-GLPKRLAFVVLCSIRSSLAAFFETVRIS 292
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: A0A0D2WVR6_CAPO3 (Fido domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WVR6_CAPO3) HSP 1 Score: 108 bits (269), Expect = 4.020e-24 Identity = 79/223 (35.43%), Postives = 113/223 (50.67%), Query Frame = 1 Query: 136 FFDNSIAAMVYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRD------WDAEGGRDQMCASSERQLYQ---YLAAARFLCEEHINDDLTVDIICECHRIMMEGSTS--YGVPTKS-TLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTE-RDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGRRQHYLHAI 765 F + A+VY SNKLE TL E +TY ++ + E+ P + + W +EG SSER LYQ +L A R L + ++ L+V+++CE HRI+M+G+ S P ++ R AG Y F I L ++ + R + P LA LF IT+HPF NGNGRLCRLL SY + G F + ++GH +HY+ AI Sbjct: 24 FAKSRALAVVYLSNKLEGTLAKGTSEQETYALLDELW--EQPSPLALESPAIVLWHSEGQH-----SSERSLYQLQQHLLALRHL-QGALDQPLSVELVCETHRILMKGALSDETTAPIRAGRFRQHHCCAGKYSFPEAGTISASLSKIIEQFNERFATRKLAPYRLAAWLFVQVITLHPFENGNGRLCRLLASYVFQKCGVPFPVVITSGHSRAYKHYIDAI 238
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: A0A1Y1IK46_KLENI (Fido domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IK46_KLENI) HSP 1 Score: 103 bits (258), Expect = 6.280e-22 Identity = 80/247 (32.39%), Postives = 121/247 (48.99%), Query Frame = 1 Query: 163 VYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHINDDLTVD--IICECHRIMM-----EGSTSYGVPTKSTLRTELANAGFYVFIAPEHIRRGLQMMLSAYK-TERDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLF--YLSFSTGHKGRRQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENLRVA 873 +Y SN +E + DT+ + K + GE P + + R S ++ Q+ A R+L E + + +D I+ E HRI+M E G RTE NAG + F P I L+ +L Y E ++ P ELA L Y+F+ IHPF +GNGR+ RLL++ L+ G F L FS+GH+ +Q YL I A+ G+ L I+L + Q +G++FEN+R+ Sbjct: 108 IYFSNLIEGA---GLSLSDTHKLCVKILKGE---PVGLEENRSNSRQ-----SRTEVLQHAEAFRYLYTEMVTEGKPLDFLILQETHRILMTDMVREDGKKVGA---GIFRTEPCNAGQHQFPFPAAIVGSLRWLLHQYNWREHEQDSDPFELAAWLSYEFVAIHPFDDGNGRMSRLLMNMVLLSRGLAFPVALGFSSGHRQAKQQYLQCIRNAQARQ-GNTNRLATIILYAYQSVVGSFFENVRLV 339
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: A0A2K3D4D3_CHLRE (Fido domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D4D3_CHLRE) HSP 1 Score: 91.7 bits (226), Expect = 3.630e-18 Identity = 71/214 (33.18%), Postives = 105/214 (49.07%), Query Frame = 1 Query: 157 AMVYHSNKLEQTLHHDVLEGDTYVMIQ---KFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHINDDLTVDIICECHRIMMEGSTSYGVPTKSTLRTELANAGF-YVFIAPEHIRRGLQMMLSAYKTE----RDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGRRQHYLHAINTA 774 A V SN+LE T+ D Y ++ ++ SG P + W AEGG + ++ QL Q++ A L +LT + H+ +M G+T T R A++G YV+ APE I G++ +L A++++ + +A LFY IT+HPF NGNGRLC LL SY+L G F +S G RQH+ A+ A Sbjct: 11 ASVCLSNELEGTVPATHNAVDLYKCVESELEYPSGAALPEPAPAWPAEGGHSET--PTQAQLQQHVRALVHLLNV---SELTSAELKTTHKTLMWGATDV---TPGEYRNTSAHSGTGYVYPAPELIPAGVEGVLEAFRSDLALVNAGELDVNIMAANLFYGMITLHPFQNGNGRLCGLLASYALQAAGDPFPVSLFNGRTKSRQHFQQALRYA 216
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: A0A395S0J6_9HYPO (Fido domain-containing protein n=1 Tax=Fusarium longipes TaxID=694270 RepID=A0A395S0J6_9HYPO) HSP 1 Score: 83.6 bits (205), Expect = 1.440e-14 Identity = 67/230 (29.13%), Postives = 105/230 (45.65%), Query Frame = 1 Query: 85 VHEGLKRGRRDHEYFTEFFDNSIAAMVYHSNKLEQTLHHDVLEGD---TYVMIQKFMSGERKPPESRDWDAE-------------GGRDQMCASSERQLYQYLAAARFLCEEHIND--DLTVDIICECHRIMMEG-STSYGVPT---KSTLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTE----RDRG-MHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMR 693 + +GL + + F E F + +A MVY SN +E V G T + + GE P DAE S R++ Q+ AARF+ E+ D DLT DII E H I+ E + G P RT G +VF+ + R + ++ + T+ RD+G + P +A++ + F+ IHPF +GNGR+CRL+++ L++ Sbjct: 83 IADGLSKSKDKEAAFDEHFTDELARMVYGSNMIE------VAGGGVDITVKLCKAVFRGEPVPETIDQRDAEYEELKRHLMNNNLPSEHTAVLRSRREIVQHAQAARFIIEKVCIDGKDLTTDIIVEAHGILTEKVDLADGTPWIYYSGVYRTWNVKCGSHVFMDSTEVPRAMARLIESLDTDIKAARDKGEIDPVLIASKYCHKFVNIHPFADGNGRMCRLILNALLLK 306
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: D3AVV5_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AVV5_POLPP) HSP 1 Score: 81.6 bits (200), Expect = 1.170e-13 Identity = 67/245 (27.35%), Postives = 121/245 (49.39%), Query Frame = 1 Query: 163 VYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDW---DAEGGRDQMCASSERQLYQYLAAARFLCEEHINDDLTVDIICECHRIMMEG---STSYGVPTKSTLRTELA-NAGFYVFIAPEHIRRGLQMMLSAYKTERDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGR-RQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENLRVA 873 +Y SNK+E T + +T ++ ++++ P S D D E DQ S +++ Q+L+A ++LC E+++ DL+ DII E HR++M G S T++ ++ + I ++ + + + + + P AT L F+ IHPF++GNGRL RLL+++ L+ G F +S G + +++Y H N A P K L+ ++L S ++FE ++ Sbjct: 61 IYSSNKIEDT---GLSLEETKNIVIEYLN-----PNSMDRLLSDIEKTNDQ----SRKEVLQHLSAFQYLCRENLHSDLSEDIILETHRLLMNGLVREDGMDARAGSYRDTDITVGKDGQPCVSSDDIVPIMKRLATWFNQIKSKPFDPFVTATILKTRFLHIHPFIDGNGRLSRLLMNWVLLSKGLPFPISLQAGFSYQAKKNYFHCFN-ANDPT----KPLSSLVLESVHTHFCSFFERVKFT 288
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: A0A836B787_9CHLO (Fido domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B787_9CHLO) HSP 1 Score: 77.4 bits (189), Expect = 1.330e-13 Identity = 52/165 (31.52%), Postives = 76/165 (46.06%), Query Frame = 1 Query: 382 DDLTVDIICECHRIMMEGSTSYGVPTKSTLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTE----RDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGRRQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENL 864 D LT + + H+I+M G+ TL Y E+I G+ +L + + + +A +LFY+ I +HPF NGNGRLCRLL++Y+LM+ G F + S GHK RQH+ + A V G L +L N+ NL Sbjct: 4 DLLTCEAVKLMHKILMWGAEGVSAGEYRTLPAHSGTGTVYP--EAEYIDGGMVAVLENFHRDLALVASGALDKHIMAARLFYEMIMLHPFQNGNGRLCRLLVTYALMKAGDPFPVCLSNGHKKSRQHFQQVLRHADAHV-GDVTRLAAYILECRHHAWQNFNRNL 165 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6572 ID=mRNA_6572|Name=jgi.p|Trimin1|169100|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=888bp|location=Sequence derived from alignment at Contig_62:697583..698470- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGTGAGAAAGTGGCAGGGTCCAGTATCCACGTGCTACGTCCCCTGGGAback to top protein sequence of jgi.p|Trimin1|169100 >Trimin1|169100|e_gw1.62.102.1 ID=Trimin1|169100|e_gw1.62.102.1|Name=jgi.p|Trimin1|169100|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=296bp MVRKWQGPVSTCYVPWDADADWPFVLYSVHEGLKRGRRDHEYFTEFFDNSback to top mRNA from alignment at Contig_62:697583..698470- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6572 ID=mRNA_6572|Name=jgi.p|Trimin1|169100|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=888bp|location=Sequence derived from alignment at Contig_62:697583..698470- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_62:697583..698470- >mRNA_6572 ID=mRNA_6572|Name=jgi.p|Trimin1|169100|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=888bp|location=Sequence derived from alignment at Contig_62:697583..698470- (Tribonema minus UTEX_B_3156 )back to top |