mRNA_6572 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|169100
Unique NamemRNA_6572
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: A0A836CBJ6_9STRA (Fido domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBJ6_9STRA)

HSP 1 Score: 621 bits (1602), Expect = 2.070e-225
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 1 
Query:    1 MVRKWQGPVSTCYVPWDADADWPFVLYSVHEGLKRGRRDHEYFTEFFDNSIAAMVYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHINDDLTVDIICECHRIMMEGSTSYGVPTKSTLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTERDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGRRQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENLRVAGFNK 885
            MVRKWQGPVSTCYVPWDADADWPFVLYSVHEGLKRGRRDHEYFTEFFDNSIAAMVYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHINDDLTVDIICECHRIMMEGSTSYGVPTKSTLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTERDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGRRQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENLRVAGFNK
Sbjct:    1 MVRKWQGPVSTCYVPWDADADWPFVLYSVHEGLKRGRRDHEYFTEFFDNSIAAMVYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHINDDLTVDIICECHRIMMEGSTSYGVPTKSTLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTERDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGRRQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENLRVAGFNK 295
[Close]
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: A0A0S4KL28_BODSA (Cell division protein, Fic-like, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4KL28_BODSA)

HSP 1 Score: 182 bits (461), Expect = 1.380e-51
Identity = 108/306 (35.29%), Postives = 167/306 (54.58%), Query Frame = 1 
Query:    4 VRKWQGPVSTCYVPWDAD------ADWPFVLYSVHEGLKRGRRDH-EYFTEFFDNSIAAMVYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHINDDLTVDIICECHRIMMEGS---TSYGVPTKSTLRT---ELANAGFYVFIAPEHIRRGLQMMLSAYKTERDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGRRQHYLHAINTAR-IPV--IGSRKELNCILLLSCQRGLGNYFENLRVA 873
            VR  +      +V W+ D        W  ++  +   +     ++ +    F   ++A  ++ +N+LE T+     EG T   I  F++G    PE+  W++EGGR+    SS+RQL+Q  AAA +L  ++ +  LTV ++ E HRIMMEGS       +     LR+   E   AG + FIAP+ +   +  ++  Y+  R+    P  LAT LFY  ITIHPF+NGNGRLCR+++++SLMRDGF F +S S+G    R HY+ AIN AR +P   +    ELN + L+S +R + N+  N+ +A
Sbjct:   30 VRTGKPATPVTHVGWEKDDAEYQNKKWEDLITLMPTAIDEANDENADTIQRFLKRAMAVFIFDANRLEGTISSLHREGTTVRAILGFLNGTISAPEAVPWNSEGGREPNSPSSKRQLFQAAAAALYLLRDNASSPLTVGLLRETHRIMMEGSFVDDEDNMLAAGVLRSQPEEEVCAGLWQFIAPDEVLNAVTNLVKRYEQLREENHCPVALATHLFYYLITIHPFMNGNGRLCRMMLAWSLMRDGFPFPVSLSSGRAAARDHYMQAINCARGMPRDDVSPFSELNVMTLVSMERVISNFLGNIAIA 335
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BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: D8U8M4_VOLCA (Fic protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U8M4_VOLCA)

HSP 1 Score: 115 bits (287), Expect = 6.930e-25
Identity = 88/305 (28.85%), Postives = 148/305 (48.52%), Query Frame = 1 
Query:    1 MVRKWQGPVSTCY-VPWDADAD---WPFVLYSVHE--GLKRGRRDHEYFTEFFDNSIAAMVYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHI---NDDLTVDIICECHRIMMEGSTSYG--VPTKSTLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTERDRGMH-PTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDG--FLFYLSFSTGHKGRRQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENLRVA 873
            M    +G  S  Y  PW+ D     W  V   + E   ++ G +  E      + S+   ++ SN +E      + + +T  +++  + G++  P +     + G+      S + + Q+  A  FL ++HI      LT  ++ + H+I+M+G         +  + R+ +ANAG+++F  P  + R L ++L  Y          P  LA  L Y+F++IHPF +GNGR+CRLL++  L+  G  F   L FS+GH+  +Q YL +I  AR    G  K L  I+L S +  L  +FE LRV+
Sbjct:  661 MSPAGKGEHSNYYECPWEEDNPELVWTQVEVYLREIKKIQPGGKAAELLQSHAEWSVLCSIFFSNLIEGK---GLSQSNTASLVRAILQGQQSLPSNSSSSNKRGK-----KSAQDVTQHAVAFVFL-KQHIVVEKKKLTPQVVLDAHKILMDGMVREDGLAISAGSYRSTIANAGYHLFPPPASVERSLAVLLEEYNERAASSEEDPFALAAWLSYEFVSIHPFEDGNGRMCRLLLNMVLLSFGVPFCSALGFSSGHRQAKQQYLQSIQNARKHG-GLPKRLAFIVLCSIRSSLAAFFETLRVS 955
[Close]
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: D8U312_VOLCA (Fic protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U312_VOLCA)

HSP 1 Score: 108 bits (271), Expect = 3.980e-24
Identity = 78/250 (31.20%), Postives = 132/250 (52.80%), Query Frame = 1 
Query:  148 SIAAMVYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHI---NDDLTVDIICECHRIMMEGSTSY-GVPTKS-TLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTER-DRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDG--FLFYLSFSTGHKGRRQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENLRVA 873
            S+   ++ SN++E      +   +T  +++K + G+   P    + + G        S  ++ Q+ AA  FL ++H+      LT DI+   H+I+M+G     G P  + + R  LA+AGF+ F+ PE ++  L  +L+ Y          P  LA  L Y+F+TIHPF +GNGR+CRLL++  L+  G  F   L FS+GH+  +Q Y++ I+ A+    G  K L  ++L S +  L  +FE +R++
Sbjct:   53 SVICSIFFSNQIEGA---GLGLSNTASLVRKILQGQPLDP-CLLYSSSGS----SGKSTCEVVQHAAAFIFL-KQHVVVEKKPLTPDIVLAAHKILMDGMVCEDGKPVNAGSYRDSLAHAGFHRFLHPELVQPSLVRLLANYNARAASETEDPFALAAWLSYEFVTIHPFEDGNGRMCRLLLNMVLLSHGVPFCSALGFSSGHRRAKQQYMNCIHKAQQHG-GLPKRLAFVVLCSIRSSLAAFFETVRIS 292
[Close]
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: A0A0D2WVR6_CAPO3 (Fido domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WVR6_CAPO3)

HSP 1 Score: 108 bits (269), Expect = 4.020e-24
Identity = 79/223 (35.43%), Postives = 113/223 (50.67%), Query Frame = 1 
Query:  136 FFDNSIAAMVYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRD------WDAEGGRDQMCASSERQLYQ---YLAAARFLCEEHINDDLTVDIICECHRIMMEGSTS--YGVPTKS-TLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTE-RDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGRRQHYLHAI 765
            F  +   A+VY SNKLE TL     E +TY ++ +    E+  P + +      W +EG       SSER LYQ   +L A R L +  ++  L+V+++CE HRI+M+G+ S     P ++   R     AG Y F     I   L  ++  +      R + P  LA  LF   IT+HPF NGNGRLCRLL SY   + G  F +  ++GH    +HY+ AI
Sbjct:   24 FAKSRALAVVYLSNKLEGTLAKGTSEQETYALLDELW--EQPSPLALESPAIVLWHSEGQH-----SSERSLYQLQQHLLALRHL-QGALDQPLSVELVCETHRILMKGALSDETTAPIRAGRFRQHHCCAGKYSFPEAGTISASLSKIIEQFNERFATRKLAPYRLAAWLFVQVITLHPFENGNGRLCRLLASYVFQKCGVPFPVVITSGHSRAYKHYIDAI 238
[Close]
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: A0A1Y1IK46_KLENI (Fido domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IK46_KLENI)

HSP 1 Score: 103 bits (258), Expect = 6.280e-22
Identity = 80/247 (32.39%), Postives = 121/247 (48.99%), Query Frame = 1 
Query:  163 VYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHINDDLTVD--IICECHRIMM-----EGSTSYGVPTKSTLRTELANAGFYVFIAPEHIRRGLQMMLSAYK-TERDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLF--YLSFSTGHKGRRQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENLRVA 873
            +Y SN +E      +   DT+ +  K + GE   P   + +    R      S  ++ Q+  A R+L  E + +   +D  I+ E HRI+M     E     G       RTE  NAG + F  P  I   L+ +L  Y   E ++   P ELA  L Y+F+ IHPF +GNGR+ RLL++  L+  G  F   L FS+GH+  +Q YL  I  A+    G+   L  I+L + Q  +G++FEN+R+ 
Sbjct:  108 IYFSNLIEGA---GLSLSDTHKLCVKILKGE---PVGLEENRSNSRQ-----SRTEVLQHAEAFRYLYTEMVTEGKPLDFLILQETHRILMTDMVREDGKKVGA---GIFRTEPCNAGQHQFPFPAAIVGSLRWLLHQYNWREHEQDSDPFELAAWLSYEFVAIHPFDDGNGRMSRLLMNMVLLSRGLAFPVALGFSSGHRQAKQQYLQCIRNAQARQ-GNTNRLATIILYAYQSVVGSFFENVRLV 339
[Close]
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: A0A2K3D4D3_CHLRE (Fido domain-containing protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D4D3_CHLRE)

HSP 1 Score: 91.7 bits (226), Expect = 3.630e-18
Identity = 71/214 (33.18%), Postives = 105/214 (49.07%), Query Frame = 1 
Query:  157 AMVYHSNKLEQTLHHDVLEGDTYVMIQ---KFMSGERKPPESRDWDAEGGRDQMCASSERQLYQYLAAARFLCEEHINDDLTVDIICECHRIMMEGSTSYGVPTKSTLRTELANAGF-YVFIAPEHIRRGLQMMLSAYKTE----RDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGRRQHYLHAINTA 774
            A V  SN+LE T+       D Y  ++   ++ SG   P  +  W AEGG  +    ++ QL Q++ A   L       +LT   +   H+ +M G+T     T    R   A++G  YV+ APE I  G++ +L A++++        +    +A  LFY  IT+HPF NGNGRLC LL SY+L   G  F +S   G    RQH+  A+  A
Sbjct:   11 ASVCLSNELEGTVPATHNAVDLYKCVESELEYPSGAALPEPAPAWPAEGGHSET--PTQAQLQQHVRALVHLLNV---SELTSAELKTTHKTLMWGATDV---TPGEYRNTSAHSGTGYVYPAPELIPAGVEGVLEAFRSDLALVNAGELDVNIMAANLFYGMITLHPFQNGNGRLCGLLASYALQAAGDPFPVSLFNGRTKSRQHFQQALRYA 216
[Close]
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: A0A395S0J6_9HYPO (Fido domain-containing protein n=1 Tax=Fusarium longipes TaxID=694270 RepID=A0A395S0J6_9HYPO)

HSP 1 Score: 83.6 bits (205), Expect = 1.440e-14
Identity = 67/230 (29.13%), Postives = 105/230 (45.65%), Query Frame = 1 
Query:   85 VHEGLKRGRRDHEYFTEFFDNSIAAMVYHSNKLEQTLHHDVLEGD---TYVMIQKFMSGERKPPESRDWDAE-------------GGRDQMCASSERQLYQYLAAARFLCEEHIND--DLTVDIICECHRIMMEG-STSYGVPT---KSTLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTE----RDRG-MHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMR 693
            + +GL + +     F E F + +A MVY SN +E      V  G    T  + +    GE  P      DAE                      S R++ Q+  AARF+ E+   D  DLT DII E H I+ E    + G P        RT     G +VF+    + R +  ++ +  T+    RD+G + P  +A++  + F+ IHPF +GNGR+CRL+++  L++
Sbjct:   83 IADGLSKSKDKEAAFDEHFTDELARMVYGSNMIE------VAGGGVDITVKLCKAVFRGEPVPETIDQRDAEYEELKRHLMNNNLPSEHTAVLRSRREIVQHAQAARFIIEKVCIDGKDLTTDIIVEAHGILTEKVDLADGTPWIYYSGVYRTWNVKCGSHVFMDSTEVPRAMARLIESLDTDIKAARDKGEIDPVLIASKYCHKFVNIHPFADGNGRMCRLILNALLLK 306
[Close]
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: D3AVV5_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AVV5_POLPP)

HSP 1 Score: 81.6 bits (200), Expect = 1.170e-13
Identity = 67/245 (27.35%), Postives = 121/245 (49.39%), Query Frame = 1 
Query:  163 VYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDW---DAEGGRDQMCASSERQLYQYLAAARFLCEEHINDDLTVDIICECHRIMMEG---STSYGVPTKSTLRTELA-NAGFYVFIAPEHIRRGLQMMLSAYKTERDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGR-RQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENLRVA 873
            +Y SNK+E T    +   +T  ++ ++++     P S D    D E   DQ    S +++ Q+L+A ++LC E+++ DL+ DII E HR++M G            S   T++         ++ + I   ++ + + +   + +   P   AT L   F+ IHPF++GNGRL RLL+++ L+  G  F +S   G   + +++Y H  N A  P     K L+ ++L S      ++FE ++  
Sbjct:   61 IYSSNKIEDT---GLSLEETKNIVIEYLN-----PNSMDRLLSDIEKTNDQ----SRKEVLQHLSAFQYLCRENLHSDLSEDIILETHRLLMNGLVREDGMDARAGSYRDTDITVGKDGQPCVSSDDIVPIMKRLATWFNQIKSKPFDPFVTATILKTRFLHIHPFIDGNGRLSRLLMNWVLLSKGLPFPISLQAGFSYQAKKNYFHCFN-ANDPT----KPLSSLVLESVHTHFCSFFERVKFT 288
[Close]
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Match: A0A836B787_9CHLO (Fido domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B787_9CHLO)

HSP 1 Score: 77.4 bits (189), Expect = 1.330e-13
Identity = 52/165 (31.52%), Postives = 76/165 (46.06%), Query Frame = 1 
Query:  382 DDLTVDIICECHRIMMEGSTSYGVPTKSTLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTE----RDRGMHPTELATQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGRRQHYLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENL 864
            D LT + +   H+I+M G+         TL         Y     E+I  G+  +L  +  +        +    +A +LFY+ I +HPF NGNGRLCRLL++Y+LM+ G  F +  S GHK  RQH+   +  A   V G    L   +L        N+  NL
Sbjct:    4 DLLTCEAVKLMHKILMWGAEGVSAGEYRTLPAHSGTGTVYP--EAEYIDGGMVAVLENFHRDLALVASGALDKHIMAARLFYEMIMLHPFQNGNGRLCRLLVTYALMKAGDPFPVCLSNGHKKSRQHFQQVLRHADAHV-GDVTRLAAYILECRHHAWQNFNRNL 165
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169100 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBJ6_9STRA2.070e-225100.00Fido domain-containing protein n=1 Tax=Tribonema m... [more]
A0A0S4KL28_BODSA1.380e-5135.29Cell division protein, Fic-like, putative n=1 Tax=... [more]
D8U8M4_VOLCA6.930e-2528.85Fic protein n=1 Tax=Volvox carteri f. nagariensis ... [more]
D8U312_VOLCA3.980e-2431.20Fic protein n=1 Tax=Volvox carteri f. nagariensis ... [more]
A0A0D2WVR6_CAPO34.020e-2435.43Fido domain-containing protein n=1 Tax=Capsaspora ... [more]
A0A1Y1IK46_KLENI6.280e-2232.39Fido domain-containing protein n=1 Tax=Klebsormidi... [more]
A0A2K3D4D3_CHLRE3.630e-1833.18Fido domain-containing protein n=2 Tax=Chlamydomon... [more]
A0A395S0J6_9HYPO1.440e-1429.13Fido domain-containing protein n=1 Tax=Fusarium lo... [more]
D3AVV5_POLPP1.170e-1327.35Uncharacterized protein n=1 Tax=Polysphondylium pa... [more]
A0A836B787_9CHLO1.330e-1331.52Fido domain-containing protein n=1 Tax=Chlamydomon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_62contigContig_62:697583..698470 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|169100|e_gw1.62.102.1
BRITEko00000,ko04131,ko04147
KEGG koko:K17277
GOsGO:0000166,GO:0003008,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0005789,GO:0005886,GO:0006464,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006836,GO:0006950,GO:0006952,GO:0007600,GO:0007601,GO:0007610,GO:0007632,GO:0008081,GO:0008144,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009584,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009966,GO:0009987,GO:0010646,GO:0012505,GO:0015696,GO:0016020,GO:0016021,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0017076,GO:0018117,GO:0018175,GO:0019538,GO:0023051,GO:0030176,GO:0030544,GO:0030554,GO:0031072,GO:0031224,GO:0031227,GO:0031967,GO:0031975,GO:0031984,GO:0032501,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034260,GO:0034976,GO:0035639,GO:0036094,GO:0036211,GO:0042175,GO:0042578,GO:0042742,GO:0042802,GO:0042803,GO:0043086,GO:0043087,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044601,GO:0044602,GO:0044603,GO:0045117,GO:0046983,GO:0048519,GO:0048583,GO:0050789,GO:0050790,GO:0050794,GO:0050829,GO:0050877,GO:0050896,GO:0050906,GO:0050908,GO:0050953,GO:0050962,GO:0051087,GO:0051179,GO:0051234,GO:0051336,GO:0051346,GO:0051606,GO:0051608,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0065009,GO:0070566,GO:0070733,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0080134,GO:0080135,GO:0097159,GO:0097367,GO:0098542,GO:0098827,GO:0140096,GO:1900101,GO:1901265,GO:1901363,GO:1901564,GO:1903894,GO:1905897
Preferred nameFICD
Descriptionprotein adenylyltransferase activity
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG3177@1|root,KOG3824@2759|Eukaryota
Evalue1.14e-25
Seed ortholog3067.XP_002954959.1
Hectar predicted targeting categoryother localisation
TranscriptId169422
TrackFilteredModels1
ProteinId169100
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169100gene_6572Tribonema minus UTEX_B_3156 geneContig_62 697583..698470 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6572_1exon_6572_1Tribonema minus UTEX_B_3156 exonContig_62 697583..698470 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6572CDS_6572Tribonema minus UTEX_B_3156 CDSContig_62 697583..698470 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169100Trimin1|169100|e_gw1.62.102.1Tribonema minus UTEX_B_3156 polypeptideContig_62 697583..698470 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6572 ID=mRNA_6572|Name=jgi.p|Trimin1|169100|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=888bp|location=Sequence derived from alignment at Contig_62:697583..698470- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGAGAAAGTGGCAGGGTCCAGTATCCACGTGCTACGTCCCCTGGGA
TGCCGACGCTGATTGGCCATTTGTACTCTATTCAGTGCATGAGGGGCTGA
AGCGTGGGAGGAGAGACCATGAGTATTTCACTGAGTTCTTTGACAATAGC
ATAGCAGCAATGGTGTACCATTCCAACAAGCTGGAACAGACACTACACCA
TGATGTTCTTGAGGGGGACACTTATGTGATGATCCAGAAATTCATGAGCG
GTGAACGAAAACCTCCAGAGTCGAGAGATTGGGATGCAGAGGGGGGGCGA
GACCAGATGTGCGCCTCCAGTGAGAGACAGTTGTATCAATATCTCGCCGC
TGCACGTTTTCTGTGTGAGGAGCACATCAATGACGACCTGACGGTGGACA
TCATCTGCGAATGCCATCGCATAATGATGGAAGGGTCAACGAGCTATGGC
GTGCCGACGAAGTCGACGCTCAGGACTGAGCTGGCCAATGCAGGCTTCTA
TGTGTTCATCGCGCCTGAGCACATTCGAAGGGGATTACAGATGATGCTGA
GCGCTTACAAAACCGAACGAGATCGTGGCATGCATCCTACTGAGCTCGCC
ACCCAGTTATTTTACGACTTCATCACCATCCACCCTTTTGTTAATGGAAA
CGGGAGGCTTTGCAGGCTTCTTATATCGTACTCGCTGATGCGTGACGGTT
TTCTGTTCTATTTGAGCTTCAGCACTGGCCACAAGGGACGCCGGCAGCAC
TATCTTCATGCGATAAATACAGCAAGGATTCCGGTCATCGGCAGTCGCAA
GGAGCTCAACTGCATCCTGCTGCTCTCCTGCCAACGTGGCCTTGGGAACT
ATTTCGAAAACCTTCGAGTTGCGGGCTTCAACAAGTAA
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protein sequence of jgi.p|Trimin1|169100

>Trimin1|169100|e_gw1.62.102.1 ID=Trimin1|169100|e_gw1.62.102.1|Name=jgi.p|Trimin1|169100|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=296bp
MVRKWQGPVSTCYVPWDADADWPFVLYSVHEGLKRGRRDHEYFTEFFDNS
IAAMVYHSNKLEQTLHHDVLEGDTYVMIQKFMSGERKPPESRDWDAEGGR
DQMCASSERQLYQYLAAARFLCEEHINDDLTVDIICECHRIMMEGSTSYG
VPTKSTLRTELANAGFYVFIAPEHIRRGLQMMLSAYKTERDRGMHPTELA
TQLFYDFITIHPFVNGNGRLCRLLISYSLMRDGFLFYLSFSTGHKGRRQH
YLHAINTARIPVIGSRKELNCILLLSCQRGLGNYFENLRVAGFNK*
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mRNA from alignment at Contig_62:697583..698470-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6572 ID=mRNA_6572|Name=jgi.p|Trimin1|169100|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=888bp|location=Sequence derived from alignment at Contig_62:697583..698470- (Tribonema minus UTEX_B_3156 )
ATGGTGAGAAAGTGGCAGGGTCCAGTATCCACGTGCTACGTCCCCTGGGA
TGCCGACGCTGATTGGCCATTTGTACTCTATTCAGTGCATGAGGGGCTGA
AGCGTGGGAGGAGAGACCATGAGTATTTCACTGAGTTCTTTGACAATAGC
ATAGCAGCAATGGTGTACCATTCCAACAAGCTGGAACAGACACTACACCA
TGATGTTCTTGAGGGGGACACTTATGTGATGATCCAGAAATTCATGAGCG
GTGAACGAAAACCTCCAGAGTCGAGAGATTGGGATGCAGAGGGGGGGCGA
GACCAGATGTGCGCCTCCAGTGAGAGACAGTTGTATCAATATCTCGCCGC
TGCACGTTTTCTGTGTGAGGAGCACATCAATGACGACCTGACGGTGGACA
TCATCTGCGAATGCCATCGCATAATGATGGAAGGGTCAACGAGCTATGGC
GTGCCGACGAAGTCGACGCTCAGGACTGAGCTGGCCAATGCAGGCTTCTA
TGTGTTCATCGCGCCTGAGCACATTCGAAGGGGATTACAGATGATGCTGA
GCGCTTACAAAACCGAACGAGATCGTGGCATGCATCCTACTGAGCTCGCC
ACCCAGTTATTTTACGACTTCATCACCATCCACCCTTTTGTTAATGGAAA
CGGGAGGCTTTGCAGGCTTCTTATATCGTACTCGCTGATGCGTGACGGTT
TTCTGTTCTATTTGAGCTTCAGCACTGGCCACAAGGGACGCCGGCAGCAC
TATCTTCATGCGATAAATACAGCAAGGATTCCGGTCATCGGCAGTCGCAA
GGAGCTCAACTGCATCCTGCTGCTCTCCTGCCAACGTGGCCTTGGGAACT
ATTTCGAAAACCTTCGAGTTGCGGGCTTCAACAAGTAA
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Coding sequence (CDS) from alignment at Contig_62:697583..698470-

>mRNA_6572 ID=mRNA_6572|Name=jgi.p|Trimin1|169100|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=888bp|location=Sequence derived from alignment at Contig_62:697583..698470- (Tribonema minus UTEX_B_3156 )
ATGGTGAGAAAGTGGCAGGGTCCAGTATCCACGTGCTACGTCCCCTGGGA
TGCCGACGCTGATTGGCCATTTGTACTCTATTCAGTGCATGAGGGGCTGA
AGCGTGGGAGGAGAGACCATGAGTATTTCACTGAGTTCTTTGACAATAGC
ATAGCAGCAATGGTGTACCATTCCAACAAGCTGGAACAGACACTACACCA
TGATGTTCTTGAGGGGGACACTTATGTGATGATCCAGAAATTCATGAGCG
GTGAACGAAAACCTCCAGAGTCGAGAGATTGGGATGCAGAGGGGGGGCGA
GACCAGATGTGCGCCTCCAGTGAGAGACAGTTGTATCAATATCTCGCCGC
TGCACGTTTTCTGTGTGAGGAGCACATCAATGACGACCTGACGGTGGACA
TCATCTGCGAATGCCATCGCATAATGATGGAAGGGTCAACGAGCTATGGC
GTGCCGACGAAGTCGACGCTCAGGACTGAGCTGGCCAATGCAGGCTTCTA
TGTGTTCATCGCGCCTGAGCACATTCGAAGGGGATTACAGATGATGCTGA
GCGCTTACAAAACCGAACGAGATCGTGGCATGCATCCTACTGAGCTCGCC
ACCCAGTTATTTTACGACTTCATCACCATCCACCCTTTTGTTAATGGAAA
CGGGAGGCTTTGCAGGCTTCTTATATCGTACTCGCTGATGCGTGACGGTT
TTCTGTTCTATTTGAGCTTCAGCACTGGCCACAAGGGACGCCGGCAGCAC
TATCTTCATGCGATAAATACAGCAAGGATTCCGGTCATCGGCAGTCGCAA
GGAGCTCAACTGCATCCTGCTGCTCTCCTGCCAACGTGGCCTTGGGAACT
ATTTCGAAAACCTTCGAGTTGCGGGCTTCAACAAGTAA
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