mRNA_6452 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348335
Unique NamemRNA_6452
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A835Z376_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z376_9STRA)

HSP 1 Score: 599 bits (1545), Expect = 1.570e-210
Identity = 483/483 (100.00%), Postives = 483/483 (100.00%), Query Frame = 1 
Query:    1 MTGTSTSKPAQPLRKRSTKSPIPGDAHPLDAPHPPPNXXXXXXXXXXXXXXXXPLPSSLQEFATKTWQRSGXXXXXXXDSLPGHAAAPAQRPPSGLPLQQPAXXXXXXXXXXRSPMGLVAAMIGGPPPAGMQPWRGSGPPPMSTPVGGMALGSPPGPHAGLLPPSVQRMVPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAARMGRPRPASALVPIAMAPAEKASAAALGAPAAGNASXXXXXXXSGAISSVGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAMSACAATCIWRNCDSAAGDASAAASDGGRRAAPGRYADGMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRLKTSGGVVAGHYGGAAARHRRMIAAGEGETAAK 1449
            MTGTSTSKPAQPLRKRSTKSPIPGDAHPLDAPHPPPNXXXXXXXXXXXXXXXXPLPSSLQEFATKTWQRSGXXXXXXXDSLPGHAAAPAQRPPSGLPLQQPAXXXXXXXXXXRSPMGLVAAMIGGPPPAGMQPWRGSGPPPMSTPVGGMALGSPPGPHAGLLPPSVQRMVPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAARMGRPRPASALVPIAMAPAEKASAAALGAPAAGNASXXXXXXXSGAISSVGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAMSACAATCIWRNCDSAAGDASAAASDGGRRAAPGRYADGMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRLKTSGGVVAGHYGGAAARHRRMIAAGEGETAAK
Sbjct:    1 MTGTSTSKPAQPLRKRSTKSPIPGDAHPLDAPHPPPNXXXXXXXXXXXXXXXXPLPSSLQEFATKTWQRSGXXXXXXXDSLPGHAAAPAQRPPSGLPLQQPAXXXXXXXXXXRSPMGLVAAMIGGPPPAGMQPWRGSGPPPMSTPVGGMALGSPPGPHAGLLPPSVQRMVPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAARMGRPRPASALVPIAMAPAEKASAAALGAPAAGNASXXXXXXXSGAISSVGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAMSACAATCIWRNCDSAAGDASAAASDGGRRAAPGRYADGMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRLKTSGGVVAGHYGGAAARHRRMIAAGEGETAAK 483
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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A6G0WSX5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSX5_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 5.440e-12
Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 1 
Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SS +IH KQCK+L+IAQ+EK P  +RKP+P  P +L  +  ++ +     L+ QN AAA  F   VME C+ CGRTF  +RL
Sbjct:   21 GLSSFEIHLKQCKQLWIAQEEKKPLKERKPVPEPPTVLNDSDKSSYDLTPEELEAQNRAAAQAFEQKVMEKCQFCGRTFNPERL 104
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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A1V9Z3G1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3G1_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.690e-10
Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = 1 
Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SSI+IH KQCK L+IAQ+EK PP +R+P+P  P  +        + +   L+  N AAA  F D VME C  CGRTF  +RL
Sbjct:   66 GLSSIEIHVKQCKLLWIAQEEKKPPRERRPVPEPPHEVALEANVLYQLSPDELEALNRAAAKAFEDKVMEKCAFCGRTFNPERL 149
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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: D8LBF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBF1_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 8.850e-10
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 1 
Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SS +IH KQCK  + A QE+LP  +RKPLP +P    A     G+ +   L+ QNEAA   FN   +EAC +CGRTF+ +RL
Sbjct:   29 GLSSYEIHLKQCKAKWEATQERLPKSERKPLPQEP---DAGDPLGGKGS---LEAQNEAATQVFNTESLEACANCGRTFLKERL 106
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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A067CC08_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CC08_SAPPC)

HSP 1 Score: 66.6 bits (161), Expect = 1.860e-9
Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 1 
Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SS +IH KQCK L+IAQ+EK P  +R+P+P  P  L        + +   L+ QN AAA  F + VME C +CGRTF  +R+
Sbjct:   67 GLSSFEIHLKQCKLLWIAQEEKKPLRERRPVPEPPQELPIEANVLYQLSPDELEAQNRAAARAFEEKVMEKCAYCGRTFNPERV 150
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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: F0W0H0_9STRA (Uncharacterized protein AlNc14C4G612 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0H0_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.040e-9
Identity = 41/90 (45.56%), Postives = 53/90 (58.89%), Query Frame = 1 
Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEAL------LQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SS DIH KQCK+L+IAQ+E  P  +RKPLP  P   G AK    +   +       ++  N AA+ T+N   ME CE+CGRTF   RL
Sbjct:   23 GLSSFDIHLKQCKKLWIAQEELKPKGERKPLPKTPPKAGGAKDFESDSTGSKQMSRDEVEAMNRAASETYNVHGMEKCENCGRTFAEGRL 112
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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A1W0A3F6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3F6_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 4.060e-9
Identity = 44/91 (48.35%), Postives = 54/91 (59.34%), Query Frame = 1 
Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEAL-------LQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SS +IH KQCK+L+IAQ+E+ P  +RKPLP  P  L         DA  L       L+ QN AAA TF + VME C  CGRTF  +RL
Sbjct:   66 GLSSFEIHLKQCKQLFIAQEERKPLRERKPLPEPPNELVEIT-----DATVLYKLSPEELEAQNRAAAKTFENKVMEKCAFCGRTFNPERL 151
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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: T0R1F0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R1F0_SAPDV)

HSP 1 Score: 67.8 bits (164), Expect = 1.130e-8
Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 1 
Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SS +IH KQCK L+IAQ+EK P  +R+P+P  P  L        + +   L+ QN AAA  F + VME C +CGRTF  +RL
Sbjct:   60 GLSSFEIHLKQCKLLWIAQEEKKPLRERRPVPEPPQELPIEANVLYQLSPDELEAQNRAAARAFEEKVMEKCAYCGRTFNPERL 143
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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A024G843_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G843_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.210e-8
Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 1 
Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEAL------LQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SS DIH KQCK+L+IAQ+E  P  +RKPLP  P   G A+    + + +       ++  N+AA+  +N   ME CE+CGRTF   RL
Sbjct:   23 GLSSFDIHLKQCKKLWIAQEELKPRGERKPLPKTPPKAGGARELESDPSGSKPMTRDEVEAMNKAASEAYNVHGMEKCENCGRTFAEGRL 112
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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: W4G6I6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G6I6_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.500e-8
Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 1 
Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEAL------LQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G SS +IH KQCK+++IAQ+E  P  +R+P+P  P  L  A    G+   +       L+ QN AA   F + VME C +CGRTF  +RL
Sbjct:   23 GFSSFEIHLKQCKQMWIAQEELKPLRERRPVPEPPPTLLVATEGGGDAPSSYDLTPEQLEAQNRAAQQAFENKVMEKCPYCGRTFNPERL 112
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348335 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z376_9STRA1.570e-210100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6G0WSX5_9STRA5.440e-1247.62Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9Z3G1_9STRA2.690e-1047.62Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
D8LBF1_ECTSI8.850e-1047.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A067CC08_SAPPC1.860e-945.24Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
F0W0H0_9STRA2.040e-945.56Uncharacterized protein AlNc14C4G612 n=1 Tax=Albug... [more]
A0A1W0A3F6_9STRA4.060e-948.35Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
T0R1F0_SAPDV1.130e-846.43Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A024G843_9STRA1.210e-843.33Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
W4G6I6_9STRA2.500e-842.22Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:1240933..1246740 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348335|estExt_Genemark1.C_Ctg_220140
Descriptionzinc-finger of a C2HC-type
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs28PRY@1|root,2QWEF@2759|Eukaryota
Evalue3.35e-10
Seed ortholog653948.CCA14542
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZinc finger C2HC domain-containing protein
Ec32 orthologEc-27_004190.1
TranscriptId348657
TrackFilteredModels1
ProteinId348335
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348335gene_6452Tribonema minus UTEX_B_3156 geneContig_22 1240933..1246740 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348335Trimin1|348335|estExt_Genemark1.C_Ctg_220140Tribonema minus UTEX_B_3156 polypeptideContig_22 1240933..1246740 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6452_1exon_6452_1Tribonema minus UTEX_B_3156 exonContig_22 1240933..1241485 +
exon_6452_2exon_6452_2Tribonema minus UTEX_B_3156 exonContig_22 1242034..1242176 +
exon_6452_3exon_6452_3Tribonema minus UTEX_B_3156 exonContig_22 1242740..1243037 +
exon_6452_4exon_6452_4Tribonema minus UTEX_B_3156 exonContig_22 1243145..1243252 +
exon_6452_5exon_6452_5Tribonema minus UTEX_B_3156 exonContig_22 1244849..1244989 +
exon_6452_6exon_6452_6Tribonema minus UTEX_B_3156 exonContig_22 1245416..1245528 +
exon_6452_7exon_6452_7Tribonema minus UTEX_B_3156 exonContig_22 1246645..1246740 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6452CDS_6452Tribonema minus UTEX_B_3156 CDSContig_22 1240933..1241485 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6452 ID=mRNA_6452|Name=jgi.p|Trimin1|348335|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1452bp|location=Sequence derived from alignment at Contig_22:1240933..1246740+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACCGGCACAAGCACCAGCAAACCGGCGCAGCCGCTGCGCAAGCGCTC
CACCAAGAGCCCCATCCCCGGGGACGCCCATCCGCTGGACGCGCCCCACC
CCCCCCCCAACCCCCCGCGCCCGCAACAGCAGCAGCAGCAGCAGCAGCGG
CCGCAGCAGCCCCTACCATCGTCGCTCCAGGAATTCGCCACCAAGACGTG
GCAGCGCAGCGGCGGCGGCGGCGGCGGCGGCGGTGATAGCTTGCCGGGCC
ACGCAGCGGCGCCCGCGCAACGGCCGCCGTCCGGGCTGCCGCTTCAGCAG
CCGGCGCCCGCACCGCAGCAGCAGCAGCAGCAGCAGCGCAGCCCCATGGG
CCTCGTCGCAGCCATGATAGGCGGTCCGCCGCCGGCGGGGATGCAGCCGT
GGCGTGGCAGCGGCCCTCCCCCAATGTCGACTCCTGTTGGGGGGATGGCA
CTGGGGAGCCCCCCGGGGCCGCATGCGGGGCTGCTGCCGCCGTCGGTGCA
GCGCATGGTGCCGCTGCTGCCGCCGCCGCCGCAGCCGCGCGCATTTCCTC
CCGGCGGTGGCATCAGCAGCGGCGGAGTGGCCATCGCGCCTGCGCCGTCG
GTCGCGGCAGCAGCGCAGCAGCAGGCGGAGGCGGCAGCAGCAGCGCGACG
CCGCGAGGAGAAAGCTGCCGTCGCAGCGCGCATGGGCAGGCCCAGGCCGG
CCTCGGCACTGGTGCCCATTGCGATGGCACCTGCAGAGAAAGCCTCTGCC
GCTGCACTGGGAGCGCCTGCAGCTGGCAATGCCAGCGGCAGTGGTGACAA
CGGCAGCAGCGGCGCGATCAGCAGCGTGGGCGGCAGCAACAGCATGAGCA
CCTCCACCATGGCCAGTGGCAGCGGCATGCCTAGCGGCATGGCAGCCAGC
GGCGGCGCAAGTGGCGCCCCCAGTGGCGGTGGCGGCAACGTCGGCGGCAG
CAGCGGCGGCGGCGGCGGCAGCATCGGCAGCGGTGCCATGTCTGCCTGTG
CTGCCACCTGCATCTGGCGCAACTGCGACTCTGCCGCCGGCGATGCCTCT
GCCGCCGCCAGCGATGGGGGGCGGCGCGCCGCGCCCGGGCGCTATGCCGA
TGGCATGAGCAGCATTGATATCCACGAGAAGCAGTGCAAGGAGCTGTACA
TTGCCCAGCAGGAGAAGCTGCCACCAGACCAGCGCAAGCCCCTGCCTGCT
AAGCCCGCAATCCTCGGAGCAGCTAAGGCAGCTGCGGGCGAAGATGCGGA
AGCGCTGCTGCAGCTGCAGAATGAGGCGGCAGCGGCTACGTTCAATGATG
CCGTCATGGAGGCCTGCGAGCACTGCGGCCGGACGTTCATCGCCGACAGG
CTCAAAACATCCGGCGGCGTTGTGGCGGGCCACTATGGGGGTGCTGCAGC
AAGGCACAGGCGCATGATTGCTGCAGGGGAAGGCGAGACTGCAGCAAAGT
AA
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protein sequence of jgi.p|Trimin1|348335

>Trimin1|348335|estExt_Genemark1.C_Ctg_220140 ID=Trimin1|348335|estExt_Genemark1.C_Ctg_220140|Name=jgi.p|Trimin1|348335|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=484bp
MTGTSTSKPAQPLRKRSTKSPIPGDAHPLDAPHPPPNPPRPQQQQQQQQR
PQQPLPSSLQEFATKTWQRSGGGGGGGGDSLPGHAAAPAQRPPSGLPLQQ
PAPAPQQQQQQQRSPMGLVAAMIGGPPPAGMQPWRGSGPPPMSTPVGGMA
LGSPPGPHAGLLPPSVQRMVPLLPPPPQPRAFPPGGGISSGGVAIAPAPS
VAAAAQQQAEAAAAARRREEKAAVAARMGRPRPASALVPIAMAPAEKASA
AALGAPAAGNASGSGDNGSSGAISSVGGSNSMSTSTMASGSGMPSGMAAS
GGASGAPSGGGGNVGGSSGGGGGSIGSGAMSACAATCIWRNCDSAAGDAS
AAASDGGRRAAPGRYADGMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPA
KPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADR
LKTSGGVVAGHYGGAAARHRRMIAAGEGETAAK*
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mRNA from alignment at Contig_22:1240933..1246740+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6452 ID=mRNA_6452|Name=jgi.p|Trimin1|348335|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5808bp|location=Sequence derived from alignment at Contig_22:1240933..1246740+ (Tribonema minus UTEX_B_3156 )
ATGACCGGCACAAGCACCAGCAAACCGGCGCAGCCGCTGCGCAAGCGCTC
CACCAAGAGCCCCATCCCCGGGGACGCCCATCCGCTGGACGCGCCCCACC
CCCCCCCCAACCCCCCGCGCCCGCAACAGCAGCAGCAGCAGCAGCAGCGG
CCGCAGCAGCCCCTACCATCGTCGCTCCAGGAATTCGCCACCAAGACGTG
GCAGCGCAGCGGCGGCGGCGGCGGCGGCGGCGGTGATAGCTTGCCGGGCC
ACGCAGCGGCGCCCGCGCAACGGCCGCCGTCCGGGCTGCCGCTTCAGCAG
CCGGCGCCCGCACCGCAGCAGCAGCAGCAGCAGCAGCGCAGCCCCATGGG
CCTCGTCGCAGCCATGATAGGCGGTCCGCCGCCGGCGGGGATGCAGCCGT
GGCGTGGCAGCGGCCCTCCCCCAATGTCGACTCCTGTTGGGGGGATGGCA
CTGGGGAGCCCCCCGGGGCCGCATGCGGGGCTGCTGCCGCCGTCGGTGCA
GCGCATGGTGCCGCTGCTGCCGCCGCCGCCGCAGCCGCGCGCATTTCCTC
CCGGTACGACTGGTAGTGCAGCGTCGCATGTTGGTCAGGGAGGGTCAGAC
AGGCTGACCTTGATGCTGTCGAACTCAAGTGAAAAGTAGATAGAATCGAT
AGGTGTACCCCTGGGCAAGTTGTCACGCACTTCCTTGTCCATGTTCAATG
ACATTTTTCGATCTCTTCATTCACAACGATGCTGCAACTCTGGGCTTTGC
GTGGGTGCAGCAATGATCCCAGCTGCGAAAACGGTATACGTAAGAGTCCT
GTACCTGTCACAGGGAAAGCCATGGGTCATCATATAGCTGCCAGTGGGCA
CAAGCCATAGTGTCTATATCCTCGCGAACGGTACACGCAGGTTGCCGCAT
TGCCAGTTGCCGCCAATGCTGGTGAGTACAAGCGGGTAGCCGCAGTTGCA
GTCGTATGTGCTGGCAGTAACACACCATGCGCCAGTCTGCTCGTGTGACA
ATGGGCCTCATGATATGAGGCAGGTCCATGAGCAAGACTGCATAACCCCT
GGTGCATCACGAATTGTTGCTGATAGGCCAGCACTTTGCACTCTTCATCA
GGCGGTGGCATCAGCAGCGGCGGAGTGGCCATCGCGCCTGCGCCGTCGGT
CGCGGCAGCAGCGCAGCAGCAGGCGGAGGCGGCAGCAGCAGCGCGACGCC
GCGAGGAGAAAGCTGCCGTCGCAGCGCGCATGGGCAGGCCCAGGGTACGT
GCTGCGCAGCTGCACCAGCTCGTAGCGTTGCATGCTGTAGTAGGCTGCTC
CATTGGTGTGATGCGAGATGCTGCCCAAAACACCAAGCCATTGCTGACTC
TGCCCCCCAACTTTGAGGCGTCCACGATCCTCGTGCAGGCTCGTGGCACC
CTGACAAGCAATTTGAGTAGGTAGGCTGGTGAACACTGCATGTTGCATAC
CTGTGGCTCTAAAACTTGCCGGCCTTGACTATACAGACATCACGACCAAC
ACCCCGTTGCGAAGGCGGAACCAGCAGCCCCTTTTGCACGCTTGCAGATT
GGCAATTGGTAGACCCCTGGGTACGCTTTAACGGCGCTGGACGGTGGTGG
TAACAGCAACTGCAGACGCTATGCATCAGTGGTTAATGACAAGACACGCC
TCTGTGAGAATAGGCGCAGAGACTGTTCCTGTTAACTTGTCATGGAATGT
ACTATCACTAGTCTATCAGGACTTTCTGACAGTGCACAATGAACCTGCAC
TACAGCTTGACGACATGCTAATGGAAATTCGTTTTTCTCTCCTGCTTGCC
CATTCAGCCGGCCTCGGCACTGGTGCCCATTGCGATGGCACCTGCAGAGA
AAGCCTCTGCCGCTGCACTGGGAGCGCCTGCAGCTGGCAATGCCAGCGGC
AGTGGTGACAACGGCAGCAGCGGCGCGATCAGCAGCGTGGGCGGCAGCAA
CAGCATGAGCACCTCCACCATGGCCAGTGGCAGCGGCATGCCTAGCGGCA
TGGCAGCCAGCGGCGGCGCAAGTGGCGCCCCCAGTGGCGGTGGCGGCAAC
GTCGGCGGCAGCAGCGGCGGCGGCGGCGGCAGCATCGGCAGCGGTGCCAT
GTCTGGTAGCGCCATGCGAGAAGCGCCGCGGCCGACAGGCGCAGCGCCGT
TCAAGGTCTCAATGTCGCCGCACATGGTGGCACAGCCGGGGCAGCATGCA
CCGCAGCCGCAGCCTGTGCTGCCACCTGCATCTGGCGCAACTGCGACTCT
GCCGCCGGCGATGCCTCTGCCGCCGCCAGCGATGGGGGGCGGCGCGCCGC
GCCCGGGCGCTATGCCGATGGTCAGTGCGTGCTCATCGGTGTTCATGGTG
ACATTGGCATGGAATCGGGATGGTGTCATGCCAGGCAGCATTGGTATGCG
GTCACGTGGTCTCACTGTAACAGTTTCAGCGTTCGGTCTGTTGCTCGCTC
TACACAGAGGAGCAGCCGTTGTGCTTGAGTCCGTCAGCCATAGACCTGTT
GTTGTTCTGTTTGCAGCTCACACCCGGAAGGGCAGAGCAGGCTGCCTTAG
ATCTGGTGCTTTTGCAGCTTGCGCTTCCTGATTGCGTGAGCTAGATGAGG
GTGAGAACATCAACGCACCAGGGCTGGTACCTGCTTCTCAGGAATCGATC
TTGCGCTTCTGCAACATTCATCCCATTCCGCCTGCCATCATTCACGAACT
TGTCTGCTGCCATGTTCTGGCGCTAACACTTAAGCCACTCTACCTATTCG
TCACGTCTGCACCTTTGTCGCCAGGATCAGTAATCACTCAAGCGGCCAAG
CAAGATCTGCCACAGCCTGCAACACCACTGCACAAGCCATCAACCAAGTG
GTCATGGCAAAGCGGTTTGCAGCGCCAGCGTGATCCACCATCAAGCAACC
GTTGGTGGCAGTAGGACGCGACACACCAGCATGCCGTCTTGCGCCGTTGT
TGCGCGCACACACAGACGTTGCTGCTGTCAGCAAGAGGCACCAAGGGTAC
AAGAGCGAGGCGCAGTGCTCAGCTGCCTTAGAGGCAGTTGGAGTGTGTGT
GTGCTGTTCAGGATACCCAAACAGACATAATGCCCATGTGTGTGTGCCCG
CCCGACTCAGCTGTGGTCTCTCTGCGGTCTCTCTCTGCTCTCCTCCTTTT
TGTTGTTTCTGTTTGGCGAGAACTGTTTCTAAAAGAAGTTTTCCAGTGAG
TTGAAGTTTTCGTTGAAACTGTTCTTCTGTGGCGTTATCATCTCGACAAA
GCACACCACCAACAGCATCTGCGTGTGAGTGTGCGCTGGAGACGTAATCT
TGCAAGAGCAACAGCCAGTCCGCTGAACCAGCAGCTGCAGGCGGGCCTTT
GAGCTCGCCAAATTATCACCACCACTGCACCCATGATCAGTGTAGACATG
GCAGCGCCCGGAGTGGTGGCCAAGGCGCCCAAAGTGCGAATCTGCTACAT
CTGTGGGCGAGGATTCGGTAAGTAGCGCACTTGGCTTGCGCAGCTTCCTG
AATCGCCACACACAGATGCATACTGCTGCAGGATCTTGTGCGTTCGAATA
GCATTCAGCGACACACCACAAACTGCCATATTAACGCTGCCATCGAACAG
GCAATTTGCTGTACGCGTTTCATCTGCTCTGACTTCACTTACCTTATGAA
AGCATCAGCTTGCGACCTCAAGGTTGTTGGTGGCGTGTAATCAGACTGAA
ACCGACGCGAGTTGCTCTCAGAAAGCGCTGTATTCAGCGAGCTTATTGCA
AAGGTCAGGACGGTGCACTCCATGCATGTACGGGCTCAGAGCATAACATT
AAAGCTGAACTACATAGGCAGCCTGGCAGCAATGGTAAGCAGTGGCCTCA
CCTACTCAAAACATATTTGTTGGCCTTTGCCTTTCTCTGTTGCATGCCTC
AACGTGCGCTCATCAGGCATGAGCAGCATTGATATCCACGAGAAGCAGTG
CAAGGAGCTGTACATTGCCCAGCAGGAGAAGCTGCCACCAGACCAGCGCA
AGCCCCTGCCTGCTAAGCCCGCAATCCTCGGAGCAGCTAAGGCAGCTGCG
GGCGAAGGTGAGCTTGGCAACACAACGCTTGCTTTAGGGCACAAAGAGCT
CCATGTCATGTATTCTTTGAGGTGATGCATGCTAGAGCGGTCGTTGTCGT
GTCATGAGTTGACTTGTCTCAAAGTGCTCAGCTTTGCGAATTGGGACGGC
CAAGATGCACACGTGACCTGGTTTCAAGCTTCAGTGCCCTGGCCTACACG
CCTGAGCTACAGCTGGAATGCACATGGTTTTCCACATGCTAGCGACATGC
TAGCAAGAAGCTGGCAGGCGTAGGCACAGCACAGCTAACTTAGCCAAACA
TTTTGCCCTGCATATTCAAATCGCGTCACAGGTTGTTGTCATATATTTCT
ACAAGCAAACGAGGTGATAGCCACATGCGCCCCTGTGCTTTGTGCTGCGT
CATTAACATTTGCTGCACGCACTCTGTGCACAGATGCGGAAGCGCTGCTG
CAGCTGCAGAATGAGGCGGCAGCGGCTACGTTCAATGATGCCGTCATGGA
GGCCTGCGAGCACTGCGGCCGGACGTTCATCGCCGACAGGCTCAAAGTGC
ATCAGAGAAGGTGCACAAGTGTGTGTGTGTGTGACGGCGCTGTTGGCAAC
ATGTTTCAAATTACACTACTGCGTGAAGTGAGGGCATTGGTGCCAGTGGT
TGTGTTGTGGGGCAGTGATGATGAGTGCGTCCAGTGGTCCCGAGTTCCGC
ATTCCATGGGTACAATGACAAAGCGCAGCGTTGTGCATTCCGACACATTT
CTCAAAAATGTTTTGTTCATTGTCGCCAACGATATGAATGTAAGCCGCCG
TGCCAGCCTGCTGCGCTGTACCTGTAGTCTGTGTTTGATGCTGAGAAATA
CAAGTATCGGACACATTCAGCCCAGGCACTGATTTATCAAACCTGACAGA
CTCAAGGGGCCACATTGACAGGTTTGTGCATCGTTCGCTTGCTGCTGCAG
CTGTACAGCAGAGAAGCCATCCCGTCCTGTGGGCACAAGCCGCCTATCAG
AGGGCACTGCAGCACCAGTCTCCTCTGTCAGGCCCAAGGTCTGTACTGCC
CAACTCGCCCTTACGAAGTTGCATGTTGTGTGCGTGTGACGCGCCGCCTA
CTTGCTGAAAGCCTGGTCTGGAGCGTAGTTGAACATTTCAAATTTTCAAG
TAGGGGATATGGCACATGTTTAACACTGTGGAGCTGTGGTCGAATGCGTC
TGCTTACTGCAACTCTGTATGAGAAAGCGTGACTGCTATTTAATGCAGTG
TGAGCTTGCAATGCTGGCTTGAGCCGCTTGTGCTACATCATCAAAGTGAG
CGCCTTTGCACAAGTGACCATAGGAACACTGCAGCCATTCGCTTCGCACA
AAGTATGTGGCGGTGGAGGCTGCCATTCGGCAGATATCTGTGAAAGAGTG
TGATCAGATTATCTGGCTGGCCACAAAGTGTCAAGTGCTGTCAAGTGCAA
TTGAGGTGCGCAGCACGTCCGTGCGGGTGAATGCGGCACATGTGGACCAA
TTGCAGGCCCTGAACCTGTCATACCAGCCAGACTTGCTCTCTTCGTACTG
CCATTCAAGACACTTCTGGTACATGGTCACTCAGAAAGTGTGCAGTGGTT
TAGACAGCAACCTCGCTTGCTCACAAGGTTTTGCTGTTCATGCTTCTTTG
AATCGCTGACAGACATCCGGCGGCGTTGTGGCGGGCCACTATGGGGGTGC
TGCAGCAAGGCACAGGCGCATGATTGCTGCAGGGGAAGGCGAGACTGCAG
CAAAGTAA
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Coding sequence (CDS) from alignment at Contig_22:1240933..1246740+

>mRNA_6452 ID=mRNA_6452|Name=jgi.p|Trimin1|348335|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1452bp|location=Sequence derived from alignment at Contig_22:1240933..1246740+ (Tribonema minus UTEX_B_3156 )
ATGACCGGCACAAGCACCAGCAAACCGGCGCAGCCGCTGCGCAAGCGCTC
CACCAAGAGCCCCATCCCCGGGGACGCCCATCCGCTGGACGCGCCCCACC
CCCCCCCCAACCCCCCGCGCCCGCAACAGCAGCAGCAGCAGCAGCAGCGG
CCGCAGCAGCCCCTACCATCGTCGCTCCAGGAATTCGCCACCAAGACGTG
GCAGCGCAGCGGCGGCGGCGGCGGCGGCGGCGGTGATAGCTTGCCGGGCC
ACGCAGCGGCGCCCGCGCAACGGCCGCCGTCCGGGCTGCCGCTTCAGCAG
CCGGCGCCCGCACCGCAGCAGCAGCAGCAGCAGCAGCGCAGCCCCATGGG
CCTCGTCGCAGCCATGATAGGCGGTCCGCCGCCGGCGGGGATGCAGCCGT
GGCGTGGCAGCGGCCCTCCCCCAATGTCGACTCCTGTTGGGGGGATGGCA
CTGGGGAGCCCCCCGGGGCCGCATGCGGGGCTGCTGCCGCCGTCGGTGCA
GCGCATGGTGCCGCTGCTGCCGCCGCCGCCGCAGCCGCGCGCATTTCCTC
CCGGCGGTGGCATCAGCAGCGGCGGAGTGGCCATCGCGCCTGCGCCGTCG
GTCGCGGCAGCAGCGCAGCAGCAGGCGGAGGCGGCAGCAGCAGCGCGACG
CCGCGAGGAGAAAGCTGCCGTCGCAGCGCGCATGGGCAGGCCCAGGCCGG
CCTCGGCACTGGTGCCCATTGCGATGGCACCTGCAGAGAAAGCCTCTGCC
GCTGCACTGGGAGCGCCTGCAGCTGGCAATGCCAGCGGCAGTGGTGACAA
CGGCAGCAGCGGCGCGATCAGCAGCGTGGGCGGCAGCAACAGCATGAGCA
CCTCCACCATGGCCAGTGGCAGCGGCATGCCTAGCGGCATGGCAGCCAGC
GGCGGCGCAAGTGGCGCCCCCAGTGGCGGTGGCGGCAACGTCGGCGGCAG
CAGCGGCGGCGGCGGCGGCAGCATCGGCAGCGGTGCCATGTCTGCCTGTG
CTGCCACCTGCATCTGGCGCAACTGCGACTCTGCCGCCGGCGATGCCTCT
GCCGCCGCCAGCGATGGGGGGCGGCGCGCCGCGCCCGGGCGCTATGCCGA
TGGCATGAGCAGCATTGATATCCACGAGAAGCAGTGCAAGGAGCTGTACA
TTGCCCAGCAGGAGAAGCTGCCACCAGACCAGCGCAAGCCCCTGCCTGCT
AAGCCCGCAATCCTCGGAGCAGCTAAGGCAGCTGCGGGCGAAGATGCGGA
AGCGCTGCTGCAGCTGCAGAATGAGGCGGCAGCGGCTACGTTCAATGATG
CCGTCATGGAGGCCTGCGAGCACTGCGGCCGGACGTTCATCGCCGACAGG
CTCAAAACATCCGGCGGCGTTGTGGCGGGCCACTATGGGGGTGCTGCAGC
AAGGCACAGGCGCATGATTGCTGCAGGGGAAGGCGAGACTGCAGCAAAGT
AA
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