Trimin1|348335|estExt_Genemark1.C_Ctg_220140 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|348335
Unique NameTrimin1|348335|estExt_Genemark1.C_Ctg_220140
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length484
Homology
BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A835Z376_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z376_9STRA)

HSP 1 Score: 599 bits (1545), Expect = 1.570e-210
Identity = 483/483 (100.00%), Postives = 483/483 (100.00%), Query Frame = 0
Query:    1 MTGTSTSKPAQPLRKRSTKSPIPGDAHPLDAPHPPPNXXXXXXXXXXXXXXXXPLPSSLQEFATKTWQRSGXXXXXXXDSLPGHAAAPAQRPPSGLPLQQPAXXXXXXXXXXRSPMGLVAAMIGGPPPAGMQPWRGSGPPPMSTPVGGMALGSPPGPHAGLLPPSVQRMVPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAARMGRPRPASALVPIAMAPAEKASAAALGAPAAGNASXXXXXXXSGAISSVGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAMSACAATCIWRNCDSAAGDASAAASDGGRRAAPGRYADGMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRLKTSGGVVAGHYGGAAARHRRMIAAGEGETAAK 483
            MTGTSTSKPAQPLRKRSTKSPIPGDAHPLDAPHPPPNXXXXXXXXXXXXXXXXPLPSSLQEFATKTWQRSGXXXXXXXDSLPGHAAAPAQRPPSGLPLQQPAXXXXXXXXXXRSPMGLVAAMIGGPPPAGMQPWRGSGPPPMSTPVGGMALGSPPGPHAGLLPPSVQRMVPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAARMGRPRPASALVPIAMAPAEKASAAALGAPAAGNASXXXXXXXSGAISSVGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAMSACAATCIWRNCDSAAGDASAAASDGGRRAAPGRYADGMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRLKTSGGVVAGHYGGAAARHRRMIAAGEGETAAK
Sbjct:    1 MTGTSTSKPAQPLRKRSTKSPIPGDAHPLDAPHPPPNXXXXXXXXXXXXXXXXPLPSSLQEFATKTWQRSGXXXXXXXDSLPGHAAAPAQRPPSGLPLQQPAXXXXXXXXXXRSPMGLVAAMIGGPPPAGMQPWRGSGPPPMSTPVGGMALGSPPGPHAGLLPPSVQRMVPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAARMGRPRPASALVPIAMAPAEKASAAALGAPAAGNASXXXXXXXSGAISSVGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAMSACAATCIWRNCDSAAGDASAAASDGGRRAAPGRYADGMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRLKTSGGVVAGHYGGAAARHRRMIAAGEGETAAK 483          
BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A6G0WSX5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSX5_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 5.440e-12
Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 0
Query:  368 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRL 451
            G+SS +IH KQCK+L+IAQ+EK P  +RKP+P  P +L  +  ++ +     L+ QN AAA  F   VME C+ CGRTF  +RL
Sbjct:   21 GLSSFEIHLKQCKQLWIAQEEKKPLKERKPVPEPPTVLNDSDKSSYDLTPEELEAQNRAAAQAFEQKVMEKCQFCGRTFNPERL 104          
BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A1V9Z3G1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3G1_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.690e-10
Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = 0
Query:  368 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRL 451
            G+SSI+IH KQCK L+IAQ+EK PP +R+P+P  P  +        + +   L+  N AAA  F D VME C  CGRTF  +RL
Sbjct:   66 GLSSIEIHVKQCKLLWIAQEEKKPPRERRPVPEPPHEVALEANVLYQLSPDELEALNRAAAKAFEDKVMEKCAFCGRTFNPERL 149          
BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: D8LBF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBF1_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 8.850e-10
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 0
Query:  368 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRL 451
            G+SS +IH KQCK  + A QE+LP  +RKPLP +P    A     G+ +   L+ QNEAA   FN   +EAC +CGRTF+ +RL
Sbjct:   29 GLSSYEIHLKQCKAKWEATQERLPKSERKPLPQEP---DAGDPLGGKGS---LEAQNEAATQVFNTESLEACANCGRTFLKERL 106          
BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A067CC08_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CC08_SAPPC)

HSP 1 Score: 66.6 bits (161), Expect = 1.860e-9
Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 0
Query:  368 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRL 451
            G+SS +IH KQCK L+IAQ+EK P  +R+P+P  P  L        + +   L+ QN AAA  F + VME C +CGRTF  +R+
Sbjct:   67 GLSSFEIHLKQCKLLWIAQEEKKPLRERRPVPEPPQELPIEANVLYQLSPDELEAQNRAAARAFEEKVMEKCAYCGRTFNPERV 150          
BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: F0W0H0_9STRA (Uncharacterized protein AlNc14C4G612 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0H0_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.040e-9
Identity = 41/90 (45.56%), Postives = 53/90 (58.89%), Query Frame = 0
Query:  368 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEAL------LQLQNEAAAATFNDAVMEACEHCGRTFIADRL 451
            G+SS DIH KQCK+L+IAQ+E  P  +RKPLP  P   G AK    +   +       ++  N AA+ T+N   ME CE+CGRTF   RL
Sbjct:   23 GLSSFDIHLKQCKKLWIAQEELKPKGERKPLPKTPPKAGGAKDFESDSTGSKQMSRDEVEAMNRAASETYNVHGMEKCENCGRTFAEGRL 112          
BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A1W0A3F6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3F6_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 4.060e-9
Identity = 44/91 (48.35%), Postives = 54/91 (59.34%), Query Frame = 0
Query:  368 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEAL-------LQLQNEAAAATFNDAVMEACEHCGRTFIADRL 451
            G+SS +IH KQCK+L+IAQ+E+ P  +RKPLP  P  L         DA  L       L+ QN AAA TF + VME C  CGRTF  +RL
Sbjct:   66 GLSSFEIHLKQCKQLFIAQEERKPLRERKPLPEPPNELVEIT-----DATVLYKLSPEELEAQNRAAAKTFENKVMEKCAFCGRTFNPERL 151          
BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: T0R1F0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R1F0_SAPDV)

HSP 1 Score: 67.8 bits (164), Expect = 1.130e-8
Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 0
Query:  368 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRL 451
            G+SS +IH KQCK L+IAQ+EK P  +R+P+P  P  L        + +   L+ QN AAA  F + VME C +CGRTF  +RL
Sbjct:   60 GLSSFEIHLKQCKLLWIAQEEKKPLRERRPVPEPPQELPIEANVLYQLSPDELEAQNRAAARAFEEKVMEKCAYCGRTFNPERL 143          
BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A024G843_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G843_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.210e-8
Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 0
Query:  368 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEAL------LQLQNEAAAATFNDAVMEACEHCGRTFIADRL 451
            G+SS DIH KQCK+L+IAQ+E  P  +RKPLP  P   G A+    + + +       ++  N+AA+  +N   ME CE+CGRTF   RL
Sbjct:   23 GLSSFDIHLKQCKKLWIAQEELKPRGERKPLPKTPPKAGGARELESDPSGSKPMTRDEVEAMNKAASEAYNVHGMEKCENCGRTFAEGRL 112          
BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: W4G6I6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G6I6_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.500e-8
Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 0
Query:  368 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEAL------LQLQNEAAAATFNDAVMEACEHCGRTFIADRL 451
            G SS +IH KQCK+++IAQ+E  P  +R+P+P  P  L  A    G+   +       L+ QN AA   F + VME C +CGRTF  +RL
Sbjct:   23 GFSSFEIHLKQCKQMWIAQEELKPLRERRPVPEPPPTLLVATEGGGDAPSSYDLTPEQLEAQNRAAQQAFENKVMEKCPYCGRTFNPERL 112          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348335 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z376_9STRA1.570e-210100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6G0WSX5_9STRA5.440e-1247.62Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9Z3G1_9STRA2.690e-1047.62Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
D8LBF1_ECTSI8.850e-1047.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A067CC08_SAPPC1.860e-945.24Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
F0W0H0_9STRA2.040e-945.56Uncharacterized protein AlNc14C4G612 n=1 Tax=Albug... [more]
A0A1W0A3F6_9STRA4.060e-948.35Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
T0R1F0_SAPDV1.130e-846.43Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A024G843_9STRA1.210e-843.33Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
W4G6I6_9STRA2.500e-842.22Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 202..222
NoneNo IPR availablePFAMPF13913zf-C2HC_2coord: 436..451
e-value: 0.0012
score: 18.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:1240933..1246740 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348335mRNA_6452Tribonema minus UTEX_B_3156 mRNAContig_22 1240933..1246740 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|348335|estExt_Genemark1.C_Ctg_220140 ID=Trimin1|348335|estExt_Genemark1.C_Ctg_220140|Name=jgi.p|Trimin1|348335|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=484bp
MTGTSTSKPAQPLRKRSTKSPIPGDAHPLDAPHPPPNPPRPQQQQQQQQR
PQQPLPSSLQEFATKTWQRSGGGGGGGGDSLPGHAAAPAQRPPSGLPLQQ
PAPAPQQQQQQQRSPMGLVAAMIGGPPPAGMQPWRGSGPPPMSTPVGGMA
LGSPPGPHAGLLPPSVQRMVPLLPPPPQPRAFPPGGGISSGGVAIAPAPS
VAAAAQQQAEAAAAARRREEKAAVAARMGRPRPASALVPIAMAPAEKASA
AALGAPAAGNASGSGDNGSSGAISSVGGSNSMSTSTMASGSGMPSGMAAS
GGASGAPSGGGGNVGGSSGGGGGSIGSGAMSACAATCIWRNCDSAAGDAS
AAASDGGRRAAPGRYADGMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPA
KPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADR
LKTSGGVVAGHYGGAAARHRRMIAAGEGETAAK*
back to top