mRNA_6452 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|348335
Unique Name	mRNA_6452
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A835Z376_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z376_9STRA)

HSP 1 Score: 599 bits (1545), Expect = 1.570e-210
Identity = 483/483 (100.00%), Postives = 483/483 (100.00%), Query Frame = 1

Query:    1 MTGTSTSKPAQPLRKRSTKSPIPGDAHPLDAPHPPPNXXXXXXXXXXXXXXXXPLPSSLQEFATKTWQRSGXXXXXXXDSLPGHAAAPAQRPPSGLPLQQPAXXXXXXXXXXRSPMGLVAAMIGGPPPAGMQPWRGSGPPPMSTPVGGMALGSPPGPHAGLLPPSVQRMVPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAARMGRPRPASALVPIAMAPAEKASAAALGAPAAGNASXXXXXXXSGAISSVGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAMSACAATCIWRNCDSAAGDASAAASDGGRRAAPGRYADGMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRLKTSGGVVAGHYGGAAARHRRMIAAGEGETAAK 1449
            MTGTSTSKPAQPLRKRSTKSPIPGDAHPLDAPHPPPNXXXXXXXXXXXXXXXXPLPSSLQEFATKTWQRSGXXXXXXXDSLPGHAAAPAQRPPSGLPLQQPAXXXXXXXXXXRSPMGLVAAMIGGPPPAGMQPWRGSGPPPMSTPVGGMALGSPPGPHAGLLPPSVQRMVPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAARMGRPRPASALVPIAMAPAEKASAAALGAPAAGNASXXXXXXXSGAISSVGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAMSACAATCIWRNCDSAAGDASAAASDGGRRAAPGRYADGMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRLKTSGGVVAGHYGGAAARHRRMIAAGEGETAAK
Sbjct:    1 MTGTSTSKPAQPLRKRSTKSPIPGDAHPLDAPHPPPNXXXXXXXXXXXXXXXXPLPSSLQEFATKTWQRSGXXXXXXXDSLPGHAAAPAQRPPSGLPLQQPAXXXXXXXXXXRSPMGLVAAMIGGPPPAGMQPWRGSGPPPMSTPVGGMALGSPPGPHAGLLPPSVQRMVPLLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAARMGRPRPASALVPIAMAPAEKASAAALGAPAAGNASXXXXXXXSGAISSVGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGAMSACAATCIWRNCDSAAGDASAAASDGGRRAAPGRYADGMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRLKTSGGVVAGHYGGAAARHRRMIAAGEGETAAK 483

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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A6G0WSX5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSX5_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 5.440e-12
Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 1

Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SS +IH KQCK+L+IAQ+EK P  +RKP+P  P +L  +  ++ +     L+ QN AAA  F   VME C+ CGRTF  +RL
Sbjct:   21 GLSSFEIHLKQCKQLWIAQEEKKPLKERKPVPEPPTVLNDSDKSSYDLTPEELEAQNRAAAQAFEQKVMEKCQFCGRTFNPERL 104

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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A1V9Z3G1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3G1_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.690e-10
Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = 1

Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SSI+IH KQCK L+IAQ+EK PP +R+P+P  P  +        + +   L+  N AAA  F D VME C  CGRTF  +RL
Sbjct:   66 GLSSIEIHVKQCKLLWIAQEEKKPPRERRPVPEPPHEVALEANVLYQLSPDELEALNRAAAKAFEDKVMEKCAFCGRTFNPERL 149

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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: D8LBF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBF1_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 8.850e-10
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 1

Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SS +IH KQCK  + A QE+LP  +RKPLP +P    A     G+ +   L+ QNEAA   FN   +EAC +CGRTF+ +RL
Sbjct:   29 GLSSYEIHLKQCKAKWEATQERLPKSERKPLPQEP---DAGDPLGGKGS---LEAQNEAATQVFNTESLEACANCGRTFLKERL 106

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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A067CC08_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CC08_SAPPC)

HSP 1 Score: 66.6 bits (161), Expect = 1.860e-9
Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 1

Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SS +IH KQCK L+IAQ+EK P  +R+P+P  P  L        + +   L+ QN AAA  F + VME C +CGRTF  +R+
Sbjct:   67 GLSSFEIHLKQCKLLWIAQEEKKPLRERRPVPEPPQELPIEANVLYQLSPDELEAQNRAAARAFEEKVMEKCAYCGRTFNPERV 150

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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: F0W0H0_9STRA (Uncharacterized protein AlNc14C4G612 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0H0_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.040e-9
Identity = 41/90 (45.56%), Postives = 53/90 (58.89%), Query Frame = 1

Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEAL------LQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SS DIH KQCK+L+IAQ+E  P  +RKPLP  P   G AK    +   +       ++  N AA+ T+N   ME CE+CGRTF   RL
Sbjct:   23 GLSSFDIHLKQCKKLWIAQEELKPKGERKPLPKTPPKAGGAKDFESDSTGSKQMSRDEVEAMNRAASETYNVHGMEKCENCGRTFAEGRL 112

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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A1W0A3F6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3F6_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 4.060e-9
Identity = 44/91 (48.35%), Postives = 54/91 (59.34%), Query Frame = 1

Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEAL-------LQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SS +IH KQCK+L+IAQ+E+ P  +RKPLP  P  L         DA  L       L+ QN AAA TF + VME C  CGRTF  +RL
Sbjct:   66 GLSSFEIHLKQCKQLFIAQEERKPLRERKPLPEPPNELVEIT-----DATVLYKLSPEELEAQNRAAAKTFENKVMEKCAFCGRTFNPERL 151

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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: T0R1F0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R1F0_SAPDV)

HSP 1 Score: 67.8 bits (164), Expect = 1.130e-8
Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 1

Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SS +IH KQCK L+IAQ+EK P  +R+P+P  P  L        + +   L+ QN AAA  F + VME C +CGRTF  +RL
Sbjct:   60 GLSSFEIHLKQCKLLWIAQEEKKPLRERRPVPEPPQELPIEANVLYQLSPDELEAQNRAAARAFEEKVMEKCAYCGRTFNPERL 143

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BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: A0A024G843_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G843_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.210e-8
Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 1

Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEAL------LQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G+SS DIH KQCK+L+IAQ+E  P  +RKPLP  P   G A+    + + +       ++  N+AA+  +N   ME CE+CGRTF   RL
Sbjct:   23 GLSSFDIHLKQCKKLWIAQEELKPRGERKPLPKTPPKAGGARELESDPSGSKPMTRDEVEAMNKAASEAYNVHGMEKCENCGRTFAEGRL 112

[Close]

BLAST of jgi.p|Trimin1|348335 vs. uniprot
Match: W4G6I6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G6I6_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.500e-8
Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 1

Query: 1102 GMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPAKPAILGAAKAAAGEDAEAL------LQLQNEAAAATFNDAVMEACEHCGRTFIADRL 1353
            G SS +IH KQCK+++IAQ+E  P  +R+P+P  P  L  A    G+   +       L+ QN AA   F + VME C +CGRTF  +RL
Sbjct:   23 GFSSFEIHLKQCKQMWIAQEELKPLRERRPVPEPPPTLLVATEGGGDAPSSYDLTPEQLEAQNRAAQQAFENKVMEKCPYCGRTFNPERL 112

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348335 vs. uniprot

BLAST of jgi.p|Trimin1|348335 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z376_9STRA	1.570e-210	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6G0WSX5_9STRA	5.440e-12	47.62	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A1V9Z3G1_9STRA	2.690e-10	47.62	Uncharacterized protein n=1 Tax=Achlya hypogyna Ta...	[more]
D8LBF1_ECTSI	8.850e-10	47.62	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A067CC08_SAPPC	1.860e-9	45.24	Uncharacterized protein n=1 Tax=Saprolegnia parasi...	[more]
F0W0H0_9STRA	2.040e-9	45.56	Uncharacterized protein AlNc14C4G612 n=1 Tax=Albug...	[more]
A0A1W0A3F6_9STRA	4.060e-9	48.35	Uncharacterized protein n=1 Tax=Thraustotheca clav...	[more]
T0R1F0_SAPDV	1.130e-8	46.43	Uncharacterized protein n=1 Tax=Saprolegnia diclin...	[more]
A0A024G843_9STRA	1.210e-8	43.33	Uncharacterized protein n=1 Tax=Albugo candida Tax...	[more]
W4G6I6_9STRA	2.500e-8	42.22	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_22	contig	Contig_22:1240933..1246740 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|348335\|estExt_Genemark1.C_Ctg_220140
Description	zinc-finger of a C2HC-type
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	28PRY@1\|root,2QWEF@2759\|Eukaryota
Evalue	3.35e-10
Seed ortholog	653948.CCA14542
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Zinc finger C2HC domain-containing protein
Ec32 ortholog	Ec-27_004190.1
TranscriptId	348657
Track	FilteredModels1
ProteinId	348335

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348335	gene_6452	Tribonema minus UTEX_B_3156	gene	Contig_22 1240933..1246740 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348335	Trimin1\|348335\|estExt_Genemark1.C_Ctg_220140	Tribonema minus UTEX_B_3156	polypeptide	Contig_22 1240933..1246740 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_6452_1	exon_6452_1	Tribonema minus UTEX_B_3156	exon	Contig_22 1240933..1241485 +
exon_6452_2	exon_6452_2	Tribonema minus UTEX_B_3156	exon	Contig_22 1242034..1242176 +
exon_6452_3	exon_6452_3	Tribonema minus UTEX_B_3156	exon	Contig_22 1242740..1243037 +
exon_6452_4	exon_6452_4	Tribonema minus UTEX_B_3156	exon	Contig_22 1243145..1243252 +
exon_6452_5	exon_6452_5	Tribonema minus UTEX_B_3156	exon	Contig_22 1244849..1244989 +
exon_6452_6	exon_6452_6	Tribonema minus UTEX_B_3156	exon	Contig_22 1245416..1245528 +
exon_6452_7	exon_6452_7	Tribonema minus UTEX_B_3156	exon	Contig_22 1246645..1246740 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_6452	CDS_6452	Tribonema minus UTEX_B_3156	CDS	Contig_22 1240933..1241485 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_22:1240933..1246740+
coding sequence from alignment at Contig_22:1240933..1246740+

spliced messenger RNA

>mRNA_6452 ID=mRNA_6452|Name=jgi.p|Trimin1|348335|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1452bp|location=Sequence derived from alignment at Contig_22:1240933..1246740+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACCGGCACAAGCACCAGCAAACCGGCGCAGCCGCTGCGCAAGCGCTC
CACCAAGAGCCCCATCCCCGGGGACGCCCATCCGCTGGACGCGCCCCACC
CCCCCCCCAACCCCCCGCGCCCGCAACAGCAGCAGCAGCAGCAGCAGCGG
CCGCAGCAGCCCCTACCATCGTCGCTCCAGGAATTCGCCACCAAGACGTG
GCAGCGCAGCGGCGGCGGCGGCGGCGGCGGCGGTGATAGCTTGCCGGGCC
ACGCAGCGGCGCCCGCGCAACGGCCGCCGTCCGGGCTGCCGCTTCAGCAG
CCGGCGCCCGCACCGCAGCAGCAGCAGCAGCAGCAGCGCAGCCCCATGGG
CCTCGTCGCAGCCATGATAGGCGGTCCGCCGCCGGCGGGGATGCAGCCGT
GGCGTGGCAGCGGCCCTCCCCCAATGTCGACTCCTGTTGGGGGGATGGCA
CTGGGGAGCCCCCCGGGGCCGCATGCGGGGCTGCTGCCGCCGTCGGTGCA
GCGCATGGTGCCGCTGCTGCCGCCGCCGCCGCAGCCGCGCGCATTTCCTC
CCGGCGGTGGCATCAGCAGCGGCGGAGTGGCCATCGCGCCTGCGCCGTCG
GTCGCGGCAGCAGCGCAGCAGCAGGCGGAGGCGGCAGCAGCAGCGCGACG
CCGCGAGGAGAAAGCTGCCGTCGCAGCGCGCATGGGCAGGCCCAGGCCGG
CCTCGGCACTGGTGCCCATTGCGATGGCACCTGCAGAGAAAGCCTCTGCC
GCTGCACTGGGAGCGCCTGCAGCTGGCAATGCCAGCGGCAGTGGTGACAA
CGGCAGCAGCGGCGCGATCAGCAGCGTGGGCGGCAGCAACAGCATGAGCA
CCTCCACCATGGCCAGTGGCAGCGGCATGCCTAGCGGCATGGCAGCCAGC
GGCGGCGCAAGTGGCGCCCCCAGTGGCGGTGGCGGCAACGTCGGCGGCAG
CAGCGGCGGCGGCGGCGGCAGCATCGGCAGCGGTGCCATGTCTGCCTGTG
CTGCCACCTGCATCTGGCGCAACTGCGACTCTGCCGCCGGCGATGCCTCT
GCCGCCGCCAGCGATGGGGGGCGGCGCGCCGCGCCCGGGCGCTATGCCGA
TGGCATGAGCAGCATTGATATCCACGAGAAGCAGTGCAAGGAGCTGTACA
TTGCCCAGCAGGAGAAGCTGCCACCAGACCAGCGCAAGCCCCTGCCTGCT
AAGCCCGCAATCCTCGGAGCAGCTAAGGCAGCTGCGGGCGAAGATGCGGA
AGCGCTGCTGCAGCTGCAGAATGAGGCGGCAGCGGCTACGTTCAATGATG
CCGTCATGGAGGCCTGCGAGCACTGCGGCCGGACGTTCATCGCCGACAGG
CTCAAAACATCCGGCGGCGTTGTGGCGGGCCACTATGGGGGTGCTGCAGC
AAGGCACAGGCGCATGATTGCTGCAGGGGAAGGCGAGACTGCAGCAAAGT
AA

protein sequence of jgi.p|Trimin1|348335

>Trimin1|348335|estExt_Genemark1.C_Ctg_220140 ID=Trimin1|348335|estExt_Genemark1.C_Ctg_220140|Name=jgi.p|Trimin1|348335|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=484bp
MTGTSTSKPAQPLRKRSTKSPIPGDAHPLDAPHPPPNPPRPQQQQQQQQR
PQQPLPSSLQEFATKTWQRSGGGGGGGGDSLPGHAAAPAQRPPSGLPLQQ
PAPAPQQQQQQQRSPMGLVAAMIGGPPPAGMQPWRGSGPPPMSTPVGGMA
LGSPPGPHAGLLPPSVQRMVPLLPPPPQPRAFPPGGGISSGGVAIAPAPS
VAAAAQQQAEAAAAARRREEKAAVAARMGRPRPASALVPIAMAPAEKASA
AALGAPAAGNASGSGDNGSSGAISSVGGSNSMSTSTMASGSGMPSGMAAS
GGASGAPSGGGGNVGGSSGGGGGSIGSGAMSACAATCIWRNCDSAAGDAS
AAASDGGRRAAPGRYADGMSSIDIHEKQCKELYIAQQEKLPPDQRKPLPA
KPAILGAAKAAAGEDAEALLQLQNEAAAATFNDAVMEACEHCGRTFIADR
LKTSGGVVAGHYGGAAARHRRMIAAGEGETAAK*

mRNA from alignment at Contig_22:1240933..1246740+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6452 ID=mRNA_6452|Name=jgi.p|Trimin1|348335|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5808bp|location=Sequence derived from alignment at Contig_22:1240933..1246740+ (Tribonema minus UTEX_B_3156 )
ATGACCGGCACAAGCACCAGCAAACCGGCGCAGCCGCTGCGCAAGCGCTC
CACCAAGAGCCCCATCCCCGGGGACGCCCATCCGCTGGACGCGCCCCACC
CCCCCCCCAACCCCCCGCGCCCGCAACAGCAGCAGCAGCAGCAGCAGCGG
CCGCAGCAGCCCCTACCATCGTCGCTCCAGGAATTCGCCACCAAGACGTG
GCAGCGCAGCGGCGGCGGCGGCGGCGGCGGCGGTGATAGCTTGCCGGGCC
ACGCAGCGGCGCCCGCGCAACGGCCGCCGTCCGGGCTGCCGCTTCAGCAG
CCGGCGCCCGCACCGCAGCAGCAGCAGCAGCAGCAGCGCAGCCCCATGGG
CCTCGTCGCAGCCATGATAGGCGGTCCGCCGCCGGCGGGGATGCAGCCGT
GGCGTGGCAGCGGCCCTCCCCCAATGTCGACTCCTGTTGGGGGGATGGCA
CTGGGGAGCCCCCCGGGGCCGCATGCGGGGCTGCTGCCGCCGTCGGTGCA
GCGCATGGTGCCGCTGCTGCCGCCGCCGCCGCAGCCGCGCGCATTTCCTC
CCGGTACGACTGGTAGTGCAGCGTCGCATGTTGGTCAGGGAGGGTCAGAC
AGGCTGACCTTGATGCTGTCGAACTCAAGTGAAAAGTAGATAGAATCGAT
AGGTGTACCCCTGGGCAAGTTGTCACGCACTTCCTTGTCCATGTTCAATG
ACATTTTTCGATCTCTTCATTCACAACGATGCTGCAACTCTGGGCTTTGC
GTGGGTGCAGCAATGATCCCAGCTGCGAAAACGGTATACGTAAGAGTCCT
GTACCTGTCACAGGGAAAGCCATGGGTCATCATATAGCTGCCAGTGGGCA
CAAGCCATAGTGTCTATATCCTCGCGAACGGTACACGCAGGTTGCCGCAT
TGCCAGTTGCCGCCAATGCTGGTGAGTACAAGCGGGTAGCCGCAGTTGCA
GTCGTATGTGCTGGCAGTAACACACCATGCGCCAGTCTGCTCGTGTGACA
ATGGGCCTCATGATATGAGGCAGGTCCATGAGCAAGACTGCATAACCCCT
GGTGCATCACGAATTGTTGCTGATAGGCCAGCACTTTGCACTCTTCATCA
GGCGGTGGCATCAGCAGCGGCGGAGTGGCCATCGCGCCTGCGCCGTCGGT
CGCGGCAGCAGCGCAGCAGCAGGCGGAGGCGGCAGCAGCAGCGCGACGCC
GCGAGGAGAAAGCTGCCGTCGCAGCGCGCATGGGCAGGCCCAGGGTACGT
GCTGCGCAGCTGCACCAGCTCGTAGCGTTGCATGCTGTAGTAGGCTGCTC
CATTGGTGTGATGCGAGATGCTGCCCAAAACACCAAGCCATTGCTGACTC
TGCCCCCCAACTTTGAGGCGTCCACGATCCTCGTGCAGGCTCGTGGCACC
CTGACAAGCAATTTGAGTAGGTAGGCTGGTGAACACTGCATGTTGCATAC
CTGTGGCTCTAAAACTTGCCGGCCTTGACTATACAGACATCACGACCAAC
ACCCCGTTGCGAAGGCGGAACCAGCAGCCCCTTTTGCACGCTTGCAGATT
GGCAATTGGTAGACCCCTGGGTACGCTTTAACGGCGCTGGACGGTGGTGG
TAACAGCAACTGCAGACGCTATGCATCAGTGGTTAATGACAAGACACGCC
TCTGTGAGAATAGGCGCAGAGACTGTTCCTGTTAACTTGTCATGGAATGT
ACTATCACTAGTCTATCAGGACTTTCTGACAGTGCACAATGAACCTGCAC
TACAGCTTGACGACATGCTAATGGAAATTCGTTTTTCTCTCCTGCTTGCC
CATTCAGCCGGCCTCGGCACTGGTGCCCATTGCGATGGCACCTGCAGAGA
AAGCCTCTGCCGCTGCACTGGGAGCGCCTGCAGCTGGCAATGCCAGCGGC
AGTGGTGACAACGGCAGCAGCGGCGCGATCAGCAGCGTGGGCGGCAGCAA
CAGCATGAGCACCTCCACCATGGCCAGTGGCAGCGGCATGCCTAGCGGCA
TGGCAGCCAGCGGCGGCGCAAGTGGCGCCCCCAGTGGCGGTGGCGGCAAC
GTCGGCGGCAGCAGCGGCGGCGGCGGCGGCAGCATCGGCAGCGGTGCCAT
GTCTGGTAGCGCCATGCGAGAAGCGCCGCGGCCGACAGGCGCAGCGCCGT
TCAAGGTCTCAATGTCGCCGCACATGGTGGCACAGCCGGGGCAGCATGCA
CCGCAGCCGCAGCCTGTGCTGCCACCTGCATCTGGCGCAACTGCGACTCT
GCCGCCGGCGATGCCTCTGCCGCCGCCAGCGATGGGGGGCGGCGCGCCGC
GCCCGGGCGCTATGCCGATGGTCAGTGCGTGCTCATCGGTGTTCATGGTG
ACATTGGCATGGAATCGGGATGGTGTCATGCCAGGCAGCATTGGTATGCG
GTCACGTGGTCTCACTGTAACAGTTTCAGCGTTCGGTCTGTTGCTCGCTC
TACACAGAGGAGCAGCCGTTGTGCTTGAGTCCGTCAGCCATAGACCTGTT
GTTGTTCTGTTTGCAGCTCACACCCGGAAGGGCAGAGCAGGCTGCCTTAG
ATCTGGTGCTTTTGCAGCTTGCGCTTCCTGATTGCGTGAGCTAGATGAGG
GTGAGAACATCAACGCACCAGGGCTGGTACCTGCTTCTCAGGAATCGATC
TTGCGCTTCTGCAACATTCATCCCATTCCGCCTGCCATCATTCACGAACT
TGTCTGCTGCCATGTTCTGGCGCTAACACTTAAGCCACTCTACCTATTCG
TCACGTCTGCACCTTTGTCGCCAGGATCAGTAATCACTCAAGCGGCCAAG
CAAGATCTGCCACAGCCTGCAACACCACTGCACAAGCCATCAACCAAGTG
GTCATGGCAAAGCGGTTTGCAGCGCCAGCGTGATCCACCATCAAGCAACC
GTTGGTGGCAGTAGGACGCGACACACCAGCATGCCGTCTTGCGCCGTTGT
TGCGCGCACACACAGACGTTGCTGCTGTCAGCAAGAGGCACCAAGGGTAC
AAGAGCGAGGCGCAGTGCTCAGCTGCCTTAGAGGCAGTTGGAGTGTGTGT
GTGCTGTTCAGGATACCCAAACAGACATAATGCCCATGTGTGTGTGCCCG
CCCGACTCAGCTGTGGTCTCTCTGCGGTCTCTCTCTGCTCTCCTCCTTTT
TGTTGTTTCTGTTTGGCGAGAACTGTTTCTAAAAGAAGTTTTCCAGTGAG
TTGAAGTTTTCGTTGAAACTGTTCTTCTGTGGCGTTATCATCTCGACAAA
GCACACCACCAACAGCATCTGCGTGTGAGTGTGCGCTGGAGACGTAATCT
TGCAAGAGCAACAGCCAGTCCGCTGAACCAGCAGCTGCAGGCGGGCCTTT
GAGCTCGCCAAATTATCACCACCACTGCACCCATGATCAGTGTAGACATG
GCAGCGCCCGGAGTGGTGGCCAAGGCGCCCAAAGTGCGAATCTGCTACAT
CTGTGGGCGAGGATTCGGTAAGTAGCGCACTTGGCTTGCGCAGCTTCCTG
AATCGCCACACACAGATGCATACTGCTGCAGGATCTTGTGCGTTCGAATA
GCATTCAGCGACACACCACAAACTGCCATATTAACGCTGCCATCGAACAG
GCAATTTGCTGTACGCGTTTCATCTGCTCTGACTTCACTTACCTTATGAA
AGCATCAGCTTGCGACCTCAAGGTTGTTGGTGGCGTGTAATCAGACTGAA
ACCGACGCGAGTTGCTCTCAGAAAGCGCTGTATTCAGCGAGCTTATTGCA
AAGGTCAGGACGGTGCACTCCATGCATGTACGGGCTCAGAGCATAACATT
AAAGCTGAACTACATAGGCAGCCTGGCAGCAATGGTAAGCAGTGGCCTCA
CCTACTCAAAACATATTTGTTGGCCTTTGCCTTTCTCTGTTGCATGCCTC
AACGTGCGCTCATCAGGCATGAGCAGCATTGATATCCACGAGAAGCAGTG
CAAGGAGCTGTACATTGCCCAGCAGGAGAAGCTGCCACCAGACCAGCGCA
AGCCCCTGCCTGCTAAGCCCGCAATCCTCGGAGCAGCTAAGGCAGCTGCG
GGCGAAGGTGAGCTTGGCAACACAACGCTTGCTTTAGGGCACAAAGAGCT
CCATGTCATGTATTCTTTGAGGTGATGCATGCTAGAGCGGTCGTTGTCGT
GTCATGAGTTGACTTGTCTCAAAGTGCTCAGCTTTGCGAATTGGGACGGC
CAAGATGCACACGTGACCTGGTTTCAAGCTTCAGTGCCCTGGCCTACACG
CCTGAGCTACAGCTGGAATGCACATGGTTTTCCACATGCTAGCGACATGC
TAGCAAGAAGCTGGCAGGCGTAGGCACAGCACAGCTAACTTAGCCAAACA
TTTTGCCCTGCATATTCAAATCGCGTCACAGGTTGTTGTCATATATTTCT
ACAAGCAAACGAGGTGATAGCCACATGCGCCCCTGTGCTTTGTGCTGCGT
CATTAACATTTGCTGCACGCACTCTGTGCACAGATGCGGAAGCGCTGCTG
CAGCTGCAGAATGAGGCGGCAGCGGCTACGTTCAATGATGCCGTCATGGA
GGCCTGCGAGCACTGCGGCCGGACGTTCATCGCCGACAGGCTCAAAGTGC
ATCAGAGAAGGTGCACAAGTGTGTGTGTGTGTGACGGCGCTGTTGGCAAC
ATGTTTCAAATTACACTACTGCGTGAAGTGAGGGCATTGGTGCCAGTGGT
TGTGTTGTGGGGCAGTGATGATGAGTGCGTCCAGTGGTCCCGAGTTCCGC
ATTCCATGGGTACAATGACAAAGCGCAGCGTTGTGCATTCCGACACATTT
CTCAAAAATGTTTTGTTCATTGTCGCCAACGATATGAATGTAAGCCGCCG
TGCCAGCCTGCTGCGCTGTACCTGTAGTCTGTGTTTGATGCTGAGAAATA
CAAGTATCGGACACATTCAGCCCAGGCACTGATTTATCAAACCTGACAGA
CTCAAGGGGCCACATTGACAGGTTTGTGCATCGTTCGCTTGCTGCTGCAG
CTGTACAGCAGAGAAGCCATCCCGTCCTGTGGGCACAAGCCGCCTATCAG
AGGGCACTGCAGCACCAGTCTCCTCTGTCAGGCCCAAGGTCTGTACTGCC
CAACTCGCCCTTACGAAGTTGCATGTTGTGTGCGTGTGACGCGCCGCCTA
CTTGCTGAAAGCCTGGTCTGGAGCGTAGTTGAACATTTCAAATTTTCAAG
TAGGGGATATGGCACATGTTTAACACTGTGGAGCTGTGGTCGAATGCGTC
TGCTTACTGCAACTCTGTATGAGAAAGCGTGACTGCTATTTAATGCAGTG
TGAGCTTGCAATGCTGGCTTGAGCCGCTTGTGCTACATCATCAAAGTGAG
CGCCTTTGCACAAGTGACCATAGGAACACTGCAGCCATTCGCTTCGCACA
AAGTATGTGGCGGTGGAGGCTGCCATTCGGCAGATATCTGTGAAAGAGTG
TGATCAGATTATCTGGCTGGCCACAAAGTGTCAAGTGCTGTCAAGTGCAA
TTGAGGTGCGCAGCACGTCCGTGCGGGTGAATGCGGCACATGTGGACCAA
TTGCAGGCCCTGAACCTGTCATACCAGCCAGACTTGCTCTCTTCGTACTG
CCATTCAAGACACTTCTGGTACATGGTCACTCAGAAAGTGTGCAGTGGTT
TAGACAGCAACCTCGCTTGCTCACAAGGTTTTGCTGTTCATGCTTCTTTG
AATCGCTGACAGACATCCGGCGGCGTTGTGGCGGGCCACTATGGGGGTGC
TGCAGCAAGGCACAGGCGCATGATTGCTGCAGGGGAAGGCGAGACTGCAG
CAAAGTAA

Coding sequence (CDS) from alignment at Contig_22:1240933..1246740+

>mRNA_6452 ID=mRNA_6452|Name=jgi.p|Trimin1|348335|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1452bp|location=Sequence derived from alignment at Contig_22:1240933..1246740+ (Tribonema minus UTEX_B_3156 )
ATGACCGGCACAAGCACCAGCAAACCGGCGCAGCCGCTGCGCAAGCGCTC
CACCAAGAGCCCCATCCCCGGGGACGCCCATCCGCTGGACGCGCCCCACC
CCCCCCCCAACCCCCCGCGCCCGCAACAGCAGCAGCAGCAGCAGCAGCGG
CCGCAGCAGCCCCTACCATCGTCGCTCCAGGAATTCGCCACCAAGACGTG
GCAGCGCAGCGGCGGCGGCGGCGGCGGCGGCGGTGATAGCTTGCCGGGCC
ACGCAGCGGCGCCCGCGCAACGGCCGCCGTCCGGGCTGCCGCTTCAGCAG
CCGGCGCCCGCACCGCAGCAGCAGCAGCAGCAGCAGCGCAGCCCCATGGG
CCTCGTCGCAGCCATGATAGGCGGTCCGCCGCCGGCGGGGATGCAGCCGT
GGCGTGGCAGCGGCCCTCCCCCAATGTCGACTCCTGTTGGGGGGATGGCA
CTGGGGAGCCCCCCGGGGCCGCATGCGGGGCTGCTGCCGCCGTCGGTGCA
GCGCATGGTGCCGCTGCTGCCGCCGCCGCCGCAGCCGCGCGCATTTCCTC
CCGGCGGTGGCATCAGCAGCGGCGGAGTGGCCATCGCGCCTGCGCCGTCG
GTCGCGGCAGCAGCGCAGCAGCAGGCGGAGGCGGCAGCAGCAGCGCGACG
CCGCGAGGAGAAAGCTGCCGTCGCAGCGCGCATGGGCAGGCCCAGGCCGG
CCTCGGCACTGGTGCCCATTGCGATGGCACCTGCAGAGAAAGCCTCTGCC
GCTGCACTGGGAGCGCCTGCAGCTGGCAATGCCAGCGGCAGTGGTGACAA
CGGCAGCAGCGGCGCGATCAGCAGCGTGGGCGGCAGCAACAGCATGAGCA
CCTCCACCATGGCCAGTGGCAGCGGCATGCCTAGCGGCATGGCAGCCAGC
GGCGGCGCAAGTGGCGCCCCCAGTGGCGGTGGCGGCAACGTCGGCGGCAG
CAGCGGCGGCGGCGGCGGCAGCATCGGCAGCGGTGCCATGTCTGCCTGTG
CTGCCACCTGCATCTGGCGCAACTGCGACTCTGCCGCCGGCGATGCCTCT
GCCGCCGCCAGCGATGGGGGGCGGCGCGCCGCGCCCGGGCGCTATGCCGA
TGGCATGAGCAGCATTGATATCCACGAGAAGCAGTGCAAGGAGCTGTACA
TTGCCCAGCAGGAGAAGCTGCCACCAGACCAGCGCAAGCCCCTGCCTGCT
AAGCCCGCAATCCTCGGAGCAGCTAAGGCAGCTGCGGGCGAAGATGCGGA
AGCGCTGCTGCAGCTGCAGAATGAGGCGGCAGCGGCTACGTTCAATGATG
CCGTCATGGAGGCCTGCGAGCACTGCGGCCGGACGTTCATCGCCGACAGG
CTCAAAACATCCGGCGGCGTTGTGGCGGGCCACTATGGGGGTGCTGCAGC
AAGGCACAGGCGCATGATTGCTGCAGGGGAAGGCGAGACTGCAGCAAAGT
AA