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Homology
BLAST of jgi.p|Trimin1|348307 vs. uniprot
Match: A0A835Z449_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z449_9STRA) HSP 1 Score: 1443 bits (3735), Expect = 0.000e+0 Identity = 1242/1242 (100.00%), Postives = 1242/1242 (100.00%), Query Frame = 1
Query: 1 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 3726
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
Sbjct: 1 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 1242
BLAST of jgi.p|Trimin1|348307 vs. uniprot
Match: A0A6H5JNQ0_9PHAE (KIX_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ0_9PHAE) HSP 1 Score: 92.4 bits (228), Expect = 4.570e-15 Identity = 52/98 (53.06%), Postives = 64/98 (65.31%), Query Frame = 1
Query: 1339 AEQLRRRYEADIRAFVQQGRSVLLK-HDGSPRSMAAHGSGGADQIRKLRQYVREGQNALVYMERCHSRGHVPSAVSLQSLEQTLAKVHCASRTLRQMM 1629
AE+LR Y+ DI FVQ G S+L K H P S ++Q+ KL QYV+EG NAL+Y+ RCH GHVPSA SLQSLE TL +VH AS L+ M+
Sbjct: 326 AEELRTIYQEDIHYFVQHGSSLLKKLHKTRPASQ------NSEQVLKLVQYVKEGHNALLYINRCHETGHVPSAASLQSLEHTLIRVHKASNALQVMI 417
BLAST of jgi.p|Trimin1|348307 vs. uniprot
Match: A0A836CHY1_9STRA (KIX_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHY1_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 2.330e-9 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 1
Query: 1465 QIRKLRQYVREGQNALVYMERCHSRGHVPSAVSLQSLEQTLAKVHCASRTLRQM 1626
++RKL QY+REGQNAL+YMERCH + H+PS SL+SL TL KVH AS LR M
Sbjct: 70 RVRKLVQYIREGQNALMYMERCHLQHHIPSGPSLESLHLTLQKVHKASLALRSM 123
BLAST of jgi.p|Trimin1|348307 vs. uniprot
Match: A0A835Z7D5_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7D5_9STRA) HSP 1 Score: 327 bits (838), Expect = 5.830e-110 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 1
Query: 1 MAAVRPLDGPLPPSLFESISRRDESGLRKYIAAGFDCNGSAAMVKALVEAGANPNYGGFNGGDTPLMQAAARGYLDVVRYLVESAGVDINAVNHMXXXXXXXXXXXXXXXXXXXXXDSGADTQIYNDAGKLAGEEFDALFEXXXXXXXXXXXXXXXXXXXXXXAADAKGAADVRALLKDYRVRRGLFVEEEKNPLLWYLEEDELEGDGAQDPNGHQ 648
MAAVRPLDGPLPPSLFESISRRDESGLRKYIAAGFDCNGSAAMVKALVEAGANPNYGGFNGGDTPLMQAAARGYLDVVRYLVESAGVDINAVNHMXXXXXXXXXXXXXXXXXXXXXDSGADTQIYNDAGKLAGEEFDALFEXXXXXXXXXXXXXXXXXXXXXXAADAKGAADVRALLKDYRVRRGLFVEEEKNPLLWYLEEDELEGDGAQDPNGHQ
Sbjct: 1 MAAVRPLDGPLPPSLFESISRRDESGLRKYIAAGFDCNGSAAMVKALVEAGANPNYGGFNGGDTPLMQAAARGYLDVVRYLVESAGVDINAVNHMXXXXXXXXXXXXXXXXXXXXXDSGADTQIYNDAGKLAGEEFDALFEXXXXXXXXXXXXXXXXXXXXXXAADAKGAADVRALLKDYRVRRGLFVEEEKNPLLWYLEEDELEGDGAQDPNGHQ 216
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | Trimin1|348307|estExt_Genemark1.C_Ctg_220087 |
| Hectar predicted targeting category | other localisation |
| TranscriptId | 348629 |
| Track | FilteredModels1 |
| ProteinId | 348307 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6398 ID=mRNA_6398|Name=jgi.p|Trimin1|348307|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3729bp|location=Sequence derived from alignment at Contig_22:749990..755628- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
ATGGACGGCAAGTGCGAGCTCAGTCGGCTAGACCGAGAAAGCTACACTCG
CCAGATTACCTGTTTTCTGGCGGAACTAGAGAGGAAGGACAGGCATGACG
CCGTCTTGTTCCAGTTGGCGGGCAAGTTTGAGGCTCAGATCTTCGAGGCA
GCCTCAAACGCTTCCGACTACCAGGTACGCATAACGAGGAAGCTCATGAG
GGTGAAGGAGATCAGGCAGCAGCAGCAAGCCCGCAACCAGCAGCAGCAAC
AGATGCTGCAGCAGGCGCAGGCGCACCAGCAGCAGCAGCACCAGCAGCGG
CAGCACACTCAGTCGCTGCCGCCCCCGCCCACGCAAGCGCAGCAGCAGCT
GCAGGCGCACCAACAGCACCGGCAACTTCAGCAACAGCAGCAGTTTCATG
ACGACGGGCGCGGGAACGGTGCGTCGGCCGCGCAGCTGCAACGCATCTTT
GAGATGCGCGGCGAGAGCTGCTCTCCTCACATTCAGCAGCAGCATCAGCA
ACAGGCTGGCGGGGGGCGTCAATGGCCAACCATGCAGCCGCCACCGCAGC
AGCAGGATCCGCAGCAGATGTCGATCTCCCCCGCGCTGCCGCCGCAGCAG
CAGCCACTGCGGCAGCAGAAGCAGCAGCAGGGCATGGGGAGCCTGTCCGC
GTATGCGGCACAGCAGCAGGCCAATCTGCAGGCTGTGCAGGCGCAGCAGA
CGCAAGCTCTCAACGCTCAGCACGAGGCGCAGCAGGCGCAGCTGTTGACG
CATCAGCTGCAGCAGCGCAACACGGCGCGCGGAGGTGACCTCGGGCACCA
GCAGCAGCAGCAGCGCGCGCTGATGGAGCAGCAGGCGGCGCAGTGGCGGC
GCCTCGAGGTGCAGCAGGCGCAGCAGCGGCAGCAAGCGGAGCATGCGCTC
GCTGCGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCATGAGCAGCAATT
AGCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACGTCGGGCGCAGCAGG
AGGCCGCAGCTGCTCAGCAGCGGCAGGCTGCTGCGGCGGCAGCCGCGCAG
CAGGAGGCGCAGCAGCAGCAGCAGCGCGCGCAACAGCGGCAGCAGGAGGC
GGCAGCTGCAGCGCGGCATCAGGCGTTGCTCGTGCAGCAGCTCGCCCAGC
AACAGGCGCAACAGCAGCAGCAGCAGCAGCGATTAGACTACATGAACCGC
ATGCAGATGCAGCAACAGCAGCAGCAGCATGCGCAGCACCTGCCTGGCAT
TGGCGGCGGCAGCGGCGGCGGTGCCGCGGCGGCGCGGTCTCCCGCCGAAG
TCGACACCCCGCAGCAGCAGGCGGCGCGGGTGGAGTGCGCGGAGCAGCTG
CGGCGGCGGTACGAGGCGGACATCCGGGCATTTGTGCAGCAGGGGCGCAG
CGTGCTGCTCAAGCACGACGGGTCGCCGCGGAGCATGGCCGCGCACGGCA
GCGGCGGCGCCGACCAGATCCGCAAGCTGCGCCAGTACGTGCGCGAGGGG
CAGAACGCGCTCGTGTACATGGAGCGCTGCCACTCGCGCGGCCACGTCCC
CAGCGCCGTGTCGCTGCAGTCGCTGGAGCAGACGCTCGCCAAGGTGCACT
GCGCAAGCCGGACGCTGCGCCAGATGATGCTGTGCGCGGCGGCGGGGCCC
GCAGGCGCCGCCGCCGCCGCGGCGCAGCGCGGTTACCACGCCGCGGCGGC
GCCGCCTCCCCCGCTGCGCGGCGCGCAGCAGCTGTCGCTGGATGCGCAGC
AGCAGCAGCGCCTGTACGCCAACGGCGGCGCCGGCAGCAGCAGCAGCGGC
ATCGGCGGCATCAGCGGCGGCTGCGGGGACCTGGCGCTGGACCCCGCCAT
CGACGACCTGGAGCCGATCCCGCTGCCGGACGCGTACTGCAACGGCAGCG
GCGGAGGCGGCGTGGGCGGCAACTTCAACTGGAAGTTACCGCGCGGCAGC
GCCTCCCCTCCCGCCACGGCGCTCCTCAAGCTGGAGCCCACGCTCGCGAA
GCGTAAGCCCAAGGCCGAGCCGCAGTGGGCGCCGCCGGCAGCGCTGAGCG
GCGCTGCGGCGGAGCCCAAGCCGGAACCGCAGCAGCAGCTGAGCGTTGAT
GCATTTCTGCTCGGCGCCGACGACGCGCTGGCGCTCCCCGACATGGAGCC
TATACCATTCGGCGACGCGTACGGCGGCAGCGGCGGCGGCGGCGGCGCCA
CGGACATGCTGAGCGCTGCCAACGACGACCTCGGCTTCAGCCTCCTCGAC
GCGGAAGACTTCCTGCTCGACATGAGCGACCTGGACACGCTGGGGTGGCA
CGGCGGCGGCGGCGGCGGCGGCAGCGGCAGCAGCGGCGCGGACGCGCTCC
TGTCGCGGCAGGGGTCTTGGGCGGCGCACGACGCGTTCGACGCGCACGCG
GACGCGGTGGAGGCGCCGCTGCCGCCGAGCTCTAGCGCTGGCAGCGGCGG
CAGCGCTGCGATGCCAGCTCCGAATGCAGATGCTTCACTCGCCATGGCAG
CGCCCACCGCCACAGCGCTCGCCGCCGCGCCGCTCGCGGCGTCCAAACCG
GACGCGACGCCGCGCGCAGCCGCCATCGCCGTGACGGTCTCACCGCCACC
GCTCGTGCCCACGCCCGTGGTGGTGCCGGACGGCAGCAGCAGCAGCAGCA
GCGGCGGCAGCAGCGACGGCAGCAGCGCCGGCGGCGGCTCGCTGAAGCGC
ATGTCCGACTGCAGCAGCGCGGACTGTGGGCCTCCCGACGGCAAGAGGGT
GTGCGTGCAGCAGGAGAGCGGCGGCGGCGCCGCTGGCGGCGGCGGCGGCG
GCGGCAGCGGCGACGGCGTCGGCGCCTGCGCGGCGATGACAACGCTGCAG
TCGCAGCACCAGACCCCCTCCCCCCCCTCTGCGCCCGTGGCGGCGCTGCT
GCGGCAGCTCCAGGGCGCCGTCGGCGCGGACTTCGCCTTCCGCGCGGAGA
CCGCCGCGGCAGACGACGACGGCAGCGGCGGCAGCGGCCGGCTGCTTCGC
CTCCACGCCTCGTGCGGCGGCGCGTTCTGCGTGTGCGTCGCCTTCGCCGC
GCGCGACGACGCGTACCCGTGCGACGTCGCCGTGCTCGCGCCCTCGGAGG
TGCCGCCGCCGCTGCCGCCGCTGCCGGCGGCGCGCCGCGGCGGCGCCGAC
GCGGGCGCGGGCGCGGACGGCGCGACGCCGCCGCCCGCGTCGACGCGCGC
CGCGTGCCAGCGCGCGACGGCGCACGCGCGCCAGGTGCTGCGCGCGATGG
TGCACGGGCCACTGTGCCCCCTCACCTCGCGTCCCAGCTCGAAGCACACT
CTCATTGCCAGCTCGCAGGTGCTGCGCGCCATGGTGGAGGGCGACGGCGG
CCGCGACGACGGCGCCGCCAGCGCGCTCATCGGCTTCTTCAAGTGGGTCG
TGACGTACCGCGGCGCGCTGCAGGAGGCGTGCGCCGCCGGCAGCAGCTGC
AGCAGCGGCGGCGCCGCCGCAGCACCGGCAGCAGCGCTCGACACTTCGCT
GCTCGTCTTGGACGGCGCTGGCGCCGCTGCCGCGGCGTCGCCGGTCGGCG
CGAAAGGGCAGGCATCGTTGCTGAGCGGCATGCCCGGCGACGGCGCAGTC
GCAGCGGCGGCGGCAGCGGCAGCAGACGGCGGCGGCGACAGCGTGTGCGC
CGACGTGGGCGCTGGCGGCGGCGGCGGCGGCGGCAGTGACGTCAGCGGCG
CACTCGACGACACGGCCATAGTGTGCTGA back to topprotein sequence of jgi.p|Trimin1|348307 >Trimin1|348307|estExt_Genemark1.C_Ctg_220087 ID=Trimin1|348307|estExt_Genemark1.C_Ctg_220087|Name=jgi.p|Trimin1|348307|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1243bp
MDGKCELSRLDRESYTRQITCFLAELERKDRHDAVLFQLAGKFEAQIFEA
ASNASDYQVRITRKLMRVKEIRQQQQARNQQQQQMLQQAQAHQQQQHQQR
QHTQSLPPPPTQAQQQLQAHQQHRQLQQQQQFHDDGRGNGASAAQLQRIF
EMRGESCSPHIQQQHQQQAGGGRQWPTMQPPPQQQDPQQMSISPALPPQQ
QPLRQQKQQQGMGSLSAYAAQQQANLQAVQAQQTQALNAQHEAQQAQLLT
HQLQQRNTARGGDLGHQQQQQRALMEQQAAQWRRLEVQQAQQRQQAEHAL
AAQQQRQQQQQQHEQQLAQQQQQQQQQQRRAQQEAAAAQQRQAAAAAAAQ
QEAQQQQQRAQQRQQEAAAAARHQALLVQQLAQQQAQQQQQQQRLDYMNR
MQMQQQQQQHAQHLPGIGGGSGGGAAAARSPAEVDTPQQQAARVECAEQL
RRRYEADIRAFVQQGRSVLLKHDGSPRSMAAHGSGGADQIRKLRQYVREG
QNALVYMERCHSRGHVPSAVSLQSLEQTLAKVHCASRTLRQMMLCAAAGP
AGAAAAAAQRGYHAAAAPPPPLRGAQQLSLDAQQQQRLYANGGAGSSSSG
IGGISGGCGDLALDPAIDDLEPIPLPDAYCNGSGGGGVGGNFNWKLPRGS
ASPPATALLKLEPTLAKRKPKAEPQWAPPAALSGAAAEPKPEPQQQLSVD
AFLLGADDALALPDMEPIPFGDAYGGSGGGGGATDMLSAANDDLGFSLLD
AEDFLLDMSDLDTLGWHGGGGGGGSGSSGADALLSRQGSWAAHDAFDAHA
DAVEAPLPPSSSAGSGGSAAMPAPNADASLAMAAPTATALAAAPLAASKP
DATPRAAAIAVTVSPPPLVPTPVVVPDGSSSSSSGGSSDGSSAGGGSLKR
MSDCSSADCGPPDGKRVCVQQESGGGAAGGGGGGGSGDGVGACAAMTTLQ
SQHQTPSPPSAPVAALLRQLQGAVGADFAFRAETAAADDDGSGGSGRLLR
LHASCGGAFCVCVAFAARDDAYPCDVAVLAPSEVPPPLPPLPAARRGGAD
AGAGADGATPPPASTRAACQRATAHARQVLRAMVHGPLCPLTSRPSSKHT
LIASSQVLRAMVEGDGGRDDGAASALIGFFKWVVTYRGALQEACAAGSSC
SSGGAAAAPAAALDTSLLVLDGAGAAAAASPVGAKGQASLLSGMPGDGAV
AAAAAAAADGGGDSVCADVGAGGGGGGGSDVSGALDDTAIVC* back to topmRNA from alignment at Contig_22:749990..755628- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6398 ID=mRNA_6398|Name=jgi.p|Trimin1|348307|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5639bp|location=Sequence derived from alignment at Contig_22:749990..755628- (Tribonema minus UTEX_B_3156 )
ATGGACGGCAAGTGCGAGCTCAGTCGGCTAGACCGAGAAAGCTACACTCG
CCAGATTACCTGTTTTCTGGCGGAACTAGAGAGGAAGGACAGGCATGACG
CCGTCTTGTTCCAGTTGGCGGGCAAGTTTGAGGCTCAGATCTTCGAGGCA
GCCTCAAACGCTTCCGACTACCAGGTACGCATAACGAGGAAGCTCATGAG
GGTGAAGGAGATCAGGCAGCAGCAGCAAGCCCGCAACCAGCAGCAGCAAC
AGATGCTGCAGCAGGCGCAGGCGCACCAGCAGCAGCAGCACCAGCAGCGG
CAGCACACTCAGTCGCTGCCGCCCCCGCCCACGCAAGCGCAGCAGCAGCT
GCAGGCGCACCAACAGCACCGGCAACTTCAGCAACAGCAGCAGTTTCATG
ACGACGGGCGCGGGAACGGTGCGTCGGCCGCGCAGCTGCAACGCATCTTT
GAGATGCGCGGCGAGAGCTGCTCTCCTCACATTCAGCAGCAGCATCAGCA
ACAGGCTGGCGGGGGGCGTCAATGGCCAACCATGCAGCCGCCACCGCAGC
AGCAGGATCCGCAGCAGATGTCGATCTCCCCCGCGCTGCCGCCGCAGCAG
CAGCCACTGCGGCAGCAGAAGCAGCAGCAGGGCATGGGGAGCCTGTCCGC
GTATGCGGCACAGCAGCAGGCCAATCTGCAGGCTGTGCAGGCGCAGCAGA
CGCAAGCTCTCAACGCTCAGCACGAGGCGCAGCAGGCGCAGCTGTTGACG
CATCAGCTGCAGCAGCGCAACACGGCGCGCGGAGGTGACCTCGGGCACCA
GCAGCAGCAGCAGCGCGCGCTGATGGAGCAGCAGGCGGCGCAGTGGCGGC
GCCTCGAGGTGCAGCAGGCGCAGCAGCGGCAGCAAGCGGAGCATGCGCTC
GCTGCGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCATGAGCAGCAATT
AGCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACGTCGGGCGCAGCAGG
AGGCCGCAGCTGCTCAGCAGCGGCAGGCTGCTGCGGCGGCAGCCGCGCAG
CAGGAGGCGCAGCAGCAGCAGCAGCGCGCGCAACAGCGGCAGCAGGAGGC
GGCAGCTGCAGCGCGGCATCAGGCGTTGCTCGTGCAGCAGCTCGCCCAGC
AACAGGCGCAACAGCAGCAGCAGCAGCAGCGATTAGACTACATGAACCGC
ATGCAGATGCAGCAACAGCAGCAGCAGCATGCGCAGCACCTGCCTGGCAT
TGGCGGCGGCAGCGGCGGCGGTGCCGCGGCGGCGCGGTCTCCCGCCGAAG
TCGACACCCCGCAGCAGCAGGCGGCGCGGGTGGAGTGCGCGGAGCAGCTG
CGGCGGCGGTACGAGGCGGACATCCGGGCATTTGTGCAGCAGGGGCGCAG
CGTGCTGCTCAAGCACGACGGGTCGCCGCGGAGCATGGTAAGTTTCGCTG
TCATATCGATGCTCAGCTCTCGTCAGCGTGTGCTTGGCGATGGACGTGCA
GTGCTGGCAGGCGGCGGCGCGGCGTCAGCGCCGGTCTCACCGTCACGCGG
TGCTGCAATAGTTGCTCTCTGAGGCGCAAGCGCGCGGCAGCGTGAGGCCA
GAGACTGTGGCGCGTCTGCGCGCATGGCGCAAGGCGCGCGCCGCCTCAAC
GCAGTCAGACGGCGCTGCAACCGCATCTGGCTGCGCTCGACCACTGTCCG
CCGCTGGTGGCTCGCGCATCGCAGCGCCCATGTTGAGCTTCACAACTCGT
GCCCACTGCTCAGCATGCAGCTCAGCGCCGCCGGCGCTGCCATGGTTGAC
ACAATCCGCGCCAGCGCCCTCATGAAGGGCGACCGGTGTAGGTACCCTCC
TGGCGTCCGAAAGTCGCAGCGTCCGCAGCACTCGCGCTTTCCTTGCTCAG
TACCGCACTCGTGCGTCCGCTGCGCCGCTGCTGCCCTTTTCCCCGCCGCG
CGCAGCAGGCCGCGCACGGCAGCGGCGGCGCCGACCAGATCCGCAAGCTG
CGCCAGTACGTGCGCGAGGGGCAGAACGCGCTCGTGTACATGGAGCGCTG
CCACTCGCGCGGCCACGTCCCCAGCGCCGTGTCGCTGCAGTCGCTGGAGC
AGACGCTCGCCAAGGTGCACTGCGCAAGCCGGACGCTGCGCCAGATGATG
CTGTGCGCGGCGGCGGGGCCCGCAGGCGCCGCCGCCGCCGCGGCGCAGCG
CGGTTACCACGCCGCGGCGGCGCCGCCTCCCCCGCTGCGCGGCGCGCAGC
AGCTGTCGCTGGATGCGCAGCAGCAGCAGCGCCTGTACGCCAACGGCGGC
GCCGGCAGCAGCAGCAGCGGCATCGGCGGCATCAGCGGCGGCTGCGGGGA
CCTGGCGCTGGACCCCGCCATCGACGACCTGGAGCCGATCCCGCTGCCGG
ACGCGTACTGCAACGGCAGCGGCGGAGGCGGCGTGGGCGGCAACTTCAAC
TGGAAGTTACCGCGCGGCAGCGCCTCCCCTCCCGCCACGGCGCTCCTCAA
GCTGGAGCCCACGCTCGCGAAGCGTAAGCCCAAGGCCGAGCCGCAGTGGG
CGCCGCCGGCAGCGCTGAGCGGCGCTGCGGCGGAGCCCAAGCCGGAACCG
CAGCAGCAGCTGAGCGTTGATGCATTTCTGCTCGGCGCCGACGACGCGCT
GGCGCTCCCCGACATGGAGCCTATACCATTCGGCGACGCGTACGGCGGCA
GCGGCGGCGGCGGCGGCGCCACGGACATGCTGAGCGCTGCCAACGACGAC
CTCGGCTTCAGCCTCCTCGACGCGGAAGACTTCCTGCTCGACATGAGCGA
CCTGGACACGCTGGGGTGGCACGGCGGCGGCGGCGGCGGCGGCAGCGGCA
GCAGCGGCGCGGACGCGCTCCTGTCGCGGCAGGGGTCTTGGGCGGCGCAC
GACGCGTTCGACGCGCACGCGGACGCGGTGGAGGCGCCGCTGCCGCCGAG
CTCTAGCGCTGGCAGCGGCGGCAGCGCTGCGATGCCAGGTTAGTCTGGAT
TACATGTGGCAGTGATGGGCATACGCGTTGGTTTGAGCGGCGGCGGCGGC
GCTGGCGGTGGCAGCAACAGCGGGAGCGTGCCGGGCTGAGCTCAGCATTG
CATCATTTCATGTCGACAAGGCTGCACTGTGCGCATGTATCAAAAATGGT
AGTGAGCATGCATTCAATGCCTCAAGCTGCGATCCCGGCGGCGCCGGCGG
CAGCGCTGGTGATGCCGCAAAGCGCGGGATAGCTTTGGATGTCAGCGCTC
AGCCTCCGAGTCAGCGGCCGCCGCGTGCCGTCTGAGCAGCGATCATTCGG
CAGCACGCGCGTCCGGCACCCCCGGTCAATTCGACGCCAACACTGACTGA
TTCGCGCGCTGCCCCCCCCCCTCCCTCGCGCAGCTCCGAATGCAGATGCT
TCACTCGCCATGGCAGCGCCCACCGCCACAGCGCTCGCCGCCGCGCCGCT
CGCGGCGTCCAAACCGGACGCGACGCCGCGCGCAGCCGCCATCGCCGTGA
CGGTCTCACCGCCACCGCTCGTGCCCACGCCCGTGGTGGTGCCGGACGGC
AGCAGCAGCAGCAGCAGCGGCGGCAGCAGCGACGGCAGCAGCGCCGGCGG
CGGCTCGCTGAAGCGCATGTCCGACTGCAGCAGCGCGGACTGTGGGCCTC
CCGACGGCAAGAGGGTGTGCGTGCAGCAGGAGAGCGGCGGCGGCGCCGCT
GGCGGCGGCGGCGGCGGCGGCAGCGGCGACGGCGTCGGCGCCTGCGCGGC
GATGACAACGCTGCAGTCGCAGGTGTGCACCTCGTGTGAACGAAAACGAA
TCAAAAGATCGTAGAGCTCTAGGTGACAAGGATATTTACCGAGAGGGCGT
GAAAGTGCTCGATCAGCAATGCGCGGCTTGCTACCAGAATCATAACCACA
CTCCTCAGCCTGTTGCAAGGTGTCGTGCAGCTGCCATCCCCCCCACCCTT
GCCCCTCGGGACCAGCAGCAGCGCTGCTCCGCCGCATCTGAGCAATCGCC
GCTACCCGGGTAATCAATCGCTGCTGCCCGTGCAAGCTGCGTTCTGCTTC
TGATCCATGCCGCCGCTAAGCTCAACTCACTCCTCCCTTCCCCTCCCCCG
CCCCGCACTTGCCACTACCACGCAGCACCAGACCCCCTCCCCCCCCTCTG
CGCCCGTGGCGGCGCTGCTGCGGCAGCTCCAGGGCGCCGTCGGCGCGGAC
TTCGCCTTCCGCGCGGAGACCGCCGCGGCAGACGACGACGGCAGCGGCGG
CAGCGGCCGGCTGCTTCGCCTCCACGCCTCGTGCGGCGGCGCGTTCTGCG
TGTGCGTCGCCTTCGCCGCGCGCGACGACGCGTACCCGTGCGACGTCGCC
GTGCTCGCGCCCTCGGAGGTGCCGCCGCCGCTGCCGCCGCTGCCGGCGGC
GCGCCGCGGCGGCGCCGACGCGGGCGCGGGCGCGGACGGCGCGACGCCGC
CGCCCGCGTCGACGCGCGCCGCGTGCCAGCGCGCGACGGCGCACGCGCGC
CAGGTGAGCAGTGCTGCTGCTGCCGCTGCTGCTGCTGCTGCTGTTGCTGC
GCGCTCTTTCCCCGGGGGGATGGCGGCGTCTGTAGGAGGCCCAGGGCACG
CGACTTCGCACGCTTGCCGGGTGAGTGACGCTGCCGCTCTGCACCCTCCC
GGCGCTACGCGGATTGCCTGGTGCTGTGTGCCATGGTGGAGCCGCCACTG
TGCAACTTACCCCCCCTCACTCCGTGCACTACTCTTGCAGTTCCAGCTCG
CAGTACACTCGCAGTTCCAGCTCGCAGGTGCCGCGGTTGACGCAGACGTG
CCCTGTACTCTGTACTGACAGAGTCTCCATAGTGTCGTTGTCTTGTCGCA
CGATCGCGCAATCCGCAATCATCTGAGCCACATCGCCAGCATTAGGTGTT
CATCATGCACCCCCCCGCGCCACGCTCTCTGCCAGGTGCTGCGCGCCATG
GTCGAGCGGCCACTGTGCCAACATGCCCCCCCCTCACACCGTGCCCGACA
CTGGCAGTTCCAGCCTGCAGTACGCCCGCAGCTGAAGGTGCGGCGGTTGA
CGCACGCCTGACCTGTCTCCCCCCGCGCCGCGCGCGTTGCCAGGTGCTGC
GCGCGATGGTGCACGGGCCACTGTGCCCCCTCACCTCGCGTCCCAGCTCG
AAGCACACTCTCATTGCCAGCTCGCAGGTGCCGTGGTTGACGCATGCATG
CTCTCTGTACTCACGCGAACATTGCCAGGTGCTGCGCGCCATGGTGGAGG
GCGACGGCGGCCGCGACGACGGCGCCGCCAGCGCGCTCATCGGCTTCTTC
AAGTGGGTCGTGACGTACCGCGGCGCGCTGCAGGAGGCGTGCGCCGCCGG
CAGCAGCTGCAGCAGCGGCGGCGCCGCCGCAGCACCGGCAGCAGCGCTCG
ACACTTCGCTGCTCGTCTTGGACGGCGCTGGCGCCGCTGCCGCGGCGTCG
CCGGTCGGCGCGAAAGGGCAGGCATCGTTGCTGAGCGGCATGCCCGGCGA
CGGCGCAGTCGCAGCGGCGGCGGCAGCGGCAGCAGACGGCGGCGGCGACA
GCGTGTGCGCCGACGTGGGCGCTGGCGGCGGCGGCGGCGGCGGCAGTGAC
GTCAGCGGCGCACTCGACGACACGGCCATAGTGTGCTGA back to topCoding sequence (CDS) from alignment at Contig_22:749990..755628- >mRNA_6398 ID=mRNA_6398|Name=jgi.p|Trimin1|348307|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3729bp|location=Sequence derived from alignment at Contig_22:749990..755628- (Tribonema minus UTEX_B_3156 )
ATGGACGGCAAGTGCGAGCTCAGTCGGCTAGACCGAGAAAGCTACACTCG
CCAGATTACCTGTTTTCTGGCGGAACTAGAGAGGAAGGACAGGCATGACG
CCGTCTTGTTCCAGTTGGCGGGCAAGTTTGAGGCTCAGATCTTCGAGGCA
GCCTCAAACGCTTCCGACTACCAGGTACGCATAACGAGGAAGCTCATGAG
GGTGAAGGAGATCAGGCAGCAGCAGCAAGCCCGCAACCAGCAGCAGCAAC
AGATGCTGCAGCAGGCGCAGGCGCACCAGCAGCAGCAGCACCAGCAGCGG
CAGCACACTCAGTCGCTGCCGCCCCCGCCCACGCAAGCGCAGCAGCAGCT
GCAGGCGCACCAACAGCACCGGCAACTTCAGCAACAGCAGCAGTTTCATG
ACGACGGGCGCGGGAACGGTGCGTCGGCCGCGCAGCTGCAACGCATCTTT
GAGATGCGCGGCGAGAGCTGCTCTCCTCACATTCAGCAGCAGCATCAGCA
ACAGGCTGGCGGGGGGCGTCAATGGCCAACCATGCAGCCGCCACCGCAGC
AGCAGGATCCGCAGCAGATGTCGATCTCCCCCGCGCTGCCGCCGCAGCAG
CAGCCACTGCGGCAGCAGAAGCAGCAGCAGGGCATGGGGAGCCTGTCCGC
GTATGCGGCACAGCAGCAGGCCAATCTGCAGGCTGTGCAGGCGCAGCAGA
CGCAAGCTCTCAACGCTCAGCACGAGGCGCAGCAGGCGCAGCTGTTGACG
CATCAGCTGCAGCAGCGCAACACGGCGCGCGGAGGTGACCTCGGGCACCA
GCAGCAGCAGCAGCGCGCGCTGATGGAGCAGCAGGCGGCGCAGTGGCGGC
GCCTCGAGGTGCAGCAGGCGCAGCAGCGGCAGCAAGCGGAGCATGCGCTC
GCTGCGCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCATGAGCAGCAATT
AGCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACGTCGGGCGCAGCAGG
AGGCCGCAGCTGCTCAGCAGCGGCAGGCTGCTGCGGCGGCAGCCGCGCAG
CAGGAGGCGCAGCAGCAGCAGCAGCGCGCGCAACAGCGGCAGCAGGAGGC
GGCAGCTGCAGCGCGGCATCAGGCGTTGCTCGTGCAGCAGCTCGCCCAGC
AACAGGCGCAACAGCAGCAGCAGCAGCAGCGATTAGACTACATGAACCGC
ATGCAGATGCAGCAACAGCAGCAGCAGCATGCGCAGCACCTGCCTGGCAT
TGGCGGCGGCAGCGGCGGCGGTGCCGCGGCGGCGCGGTCTCCCGCCGAAG
TCGACACCCCGCAGCAGCAGGCGGCGCGGGTGGAGTGCGCGGAGCAGCTG
CGGCGGCGGTACGAGGCGGACATCCGGGCATTTGTGCAGCAGGGGCGCAG
CGTGCTGCTCAAGCACGACGGGTCGCCGCGGAGCATGGCCGCGCACGGCA
GCGGCGGCGCCGACCAGATCCGCAAGCTGCGCCAGTACGTGCGCGAGGGG
CAGAACGCGCTCGTGTACATGGAGCGCTGCCACTCGCGCGGCCACGTCCC
CAGCGCCGTGTCGCTGCAGTCGCTGGAGCAGACGCTCGCCAAGGTGCACT
GCGCAAGCCGGACGCTGCGCCAGATGATGCTGTGCGCGGCGGCGGGGCCC
GCAGGCGCCGCCGCCGCCGCGGCGCAGCGCGGTTACCACGCCGCGGCGGC
GCCGCCTCCCCCGCTGCGCGGCGCGCAGCAGCTGTCGCTGGATGCGCAGC
AGCAGCAGCGCCTGTACGCCAACGGCGGCGCCGGCAGCAGCAGCAGCGGC
ATCGGCGGCATCAGCGGCGGCTGCGGGGACCTGGCGCTGGACCCCGCCAT
CGACGACCTGGAGCCGATCCCGCTGCCGGACGCGTACTGCAACGGCAGCG
GCGGAGGCGGCGTGGGCGGCAACTTCAACTGGAAGTTACCGCGCGGCAGC
GCCTCCCCTCCCGCCACGGCGCTCCTCAAGCTGGAGCCCACGCTCGCGAA
GCGTAAGCCCAAGGCCGAGCCGCAGTGGGCGCCGCCGGCAGCGCTGAGCG
GCGCTGCGGCGGAGCCCAAGCCGGAACCGCAGCAGCAGCTGAGCGTTGAT
GCATTTCTGCTCGGCGCCGACGACGCGCTGGCGCTCCCCGACATGGAGCC
TATACCATTCGGCGACGCGTACGGCGGCAGCGGCGGCGGCGGCGGCGCCA
CGGACATGCTGAGCGCTGCCAACGACGACCTCGGCTTCAGCCTCCTCGAC
GCGGAAGACTTCCTGCTCGACATGAGCGACCTGGACACGCTGGGGTGGCA
CGGCGGCGGCGGCGGCGGCGGCAGCGGCAGCAGCGGCGCGGACGCGCTCC
TGTCGCGGCAGGGGTCTTGGGCGGCGCACGACGCGTTCGACGCGCACGCG
GACGCGGTGGAGGCGCCGCTGCCGCCGAGCTCTAGCGCTGGCAGCGGCGG
CAGCGCTGCGATGCCAGCTCCGAATGCAGATGCTTCACTCGCCATGGCAG
CGCCCACCGCCACAGCGCTCGCCGCCGCGCCGCTCGCGGCGTCCAAACCG
GACGCGACGCCGCGCGCAGCCGCCATCGCCGTGACGGTCTCACCGCCACC
GCTCGTGCCCACGCCCGTGGTGGTGCCGGACGGCAGCAGCAGCAGCAGCA
GCGGCGGCAGCAGCGACGGCAGCAGCGCCGGCGGCGGCTCGCTGAAGCGC
ATGTCCGACTGCAGCAGCGCGGACTGTGGGCCTCCCGACGGCAAGAGGGT
GTGCGTGCAGCAGGAGAGCGGCGGCGGCGCCGCTGGCGGCGGCGGCGGCG
GCGGCAGCGGCGACGGCGTCGGCGCCTGCGCGGCGATGACAACGCTGCAG
TCGCAGCACCAGACCCCCTCCCCCCCCTCTGCGCCCGTGGCGGCGCTGCT
GCGGCAGCTCCAGGGCGCCGTCGGCGCGGACTTCGCCTTCCGCGCGGAGA
CCGCCGCGGCAGACGACGACGGCAGCGGCGGCAGCGGCCGGCTGCTTCGC
CTCCACGCCTCGTGCGGCGGCGCGTTCTGCGTGTGCGTCGCCTTCGCCGC
GCGCGACGACGCGTACCCGTGCGACGTCGCCGTGCTCGCGCCCTCGGAGG
TGCCGCCGCCGCTGCCGCCGCTGCCGGCGGCGCGCCGCGGCGGCGCCGAC
GCGGGCGCGGGCGCGGACGGCGCGACGCCGCCGCCCGCGTCGACGCGCGC
CGCGTGCCAGCGCGCGACGGCGCACGCGCGCCAGGTGCTGCGCGCGATGG
TGCACGGGCCACTGTGCCCCCTCACCTCGCGTCCCAGCTCGAAGCACACT
CTCATTGCCAGCTCGCAGGTGCTGCGCGCCATGGTGGAGGGCGACGGCGG
CCGCGACGACGGCGCCGCCAGCGCGCTCATCGGCTTCTTCAAGTGGGTCG
TGACGTACCGCGGCGCGCTGCAGGAGGCGTGCGCCGCCGGCAGCAGCTGC
AGCAGCGGCGGCGCCGCCGCAGCACCGGCAGCAGCGCTCGACACTTCGCT
GCTCGTCTTGGACGGCGCTGGCGCCGCTGCCGCGGCGTCGCCGGTCGGCG
CGAAAGGGCAGGCATCGTTGCTGAGCGGCATGCCCGGCGACGGCGCAGTC
GCAGCGGCGGCGGCAGCGGCAGCAGACGGCGGCGGCGACAGCGTGTGCGC
CGACGTGGGCGCTGGCGGCGGCGGCGGCGGCGGCAGTGACGTCAGCGGCG
CACTCGACGACACGGCCATAGTGTGCTGA back to top
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