Trimin1|348307|estExt_Genemark1.C_Ctg_220087 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|348307
Unique Name	Trimin1\|348307\|estExt_Genemark1.C_Ctg_220087
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1243

Homology

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BLAST of jgi.p|Trimin1|348307 vs. uniprot
Match: A0A835Z449_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z449_9STRA)

HSP 1 Score: 1443 bits (3735), Expect = 0.000e+0
Identity = 1242/1242 (100.00%), Postives = 1242/1242 (100.00%), Query Frame = 0

Query:    1 MDGKCELSRLDRESYTRQITCFLAELERKDRHDAVLFQLAGKFEAQIFEAASNASDYQVRITRKLMRVKEIRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPPPPTQXXXXXXXXXXXXXXXXXXXFHDDGRGNGASAAQLQRIFEMRGESCSPHIQQQXXXXXXXXXXWPTXXXXXXXXDPQQMSISPALPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRNTARGGDLGHQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDYMNRMXXXXXXXXXXXXLPGIGXXXXXXXXXARSPAEVDTPQQQAARVECAEQLRRRYEADIRAFVQQGRSVLLKHDGSPRSMAAHGSGGADQIRKLRQYVREGQNALVYMERCHSRGHVPSAVSLQSLEQTLAKVHCASRTLRQMMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAQQLSLDAQQQQRLYANGGAGSSSSGIGGISGGCGDLALDPAIDDLEPIPLPDAYCNGSGGGGVGGNFNWKLPRGSASPPATALLKLEPTLAKRKPKAEPQWAPPAALSGAAAEPKPEPQQQLSVDAFLLGADDALALPDMEPIPFGDAYGGSGGXXGATDMLSAANDDLGFSLLDAEDFLLDMSDLDTLGWHGGXXXXXXXXXXADALLSRQGSWAAHDAFDAHADAVEAPLPPSSSAGSGGSAAMPAPNADASLAMAAPTATALAAAPLAASKPDATPRAAAIAVTVSPPPLVPTPVXXXXXXXXXXXXXXXXXXXXXXXXLKRMSDCSSADCGPPDGKRVCVQXXXXXXXXXXXXXXXSGDGVGACAAMTTLQSQHQTPSPPSAPVAALLRQLQGAVGADFAFRAETAAADDDGSGGSGRLLRLHASCGGAFCVCVAFAARDDAYPCDVAVLAPSEVPPPLPPLPAARRGGADAGAGADGATPPPASTRAACQRATAHARQVLRAMVHGPLCPLTSRPSSKHTLIASSQVLRAMVEGDGGRDDGAASALIGFFKWVVTYRGALQEACAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPVGAKGQASLLSGMPGDGAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVSGALDDTAIVC 1242
            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
Sbjct:    1 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 1242

[Close]

BLAST of jgi.p|Trimin1|348307 vs. uniprot
Match: A0A6H5JNQ0_9PHAE (KIX_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ0_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 4.570e-15
Identity = 52/98 (53.06%), Postives = 64/98 (65.31%), Query Frame = 0

Query:  447 AEQLRRRYEADIRAFVQQGRSVLLK-HDGSPRSMAAHGSGGADQIRKLRQYVREGQNALVYMERCHSRGHVPSAVSLQSLEQTLAKVHCASRTLRQMM 543
            AE+LR  Y+ DI  FVQ G S+L K H   P S        ++Q+ KL QYV+EG NAL+Y+ RCH  GHVPSA SLQSLE TL +VH AS  L+ M+
Sbjct:  326 AEELRTIYQEDIHYFVQHGSSLLKKLHKTRPASQ------NSEQVLKLVQYVKEGHNALLYINRCHETGHVPSAASLQSLEHTLIRVHKASNALQVMI 417

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BLAST of jgi.p|Trimin1|348307 vs. uniprot
Match: A0A836CHY1_9STRA (KIX_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHY1_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 2.330e-9
Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 0

Query:  489 QIRKLRQYVREGQNALVYMERCHSRGHVPSAVSLQSLEQTLAKVHCASRTLRQM 542
            ++RKL QY+REGQNAL+YMERCH + H+PS  SL+SL  TL KVH AS  LR M
Sbjct:   70 RVRKLVQYIREGQNALMYMERCHLQHHIPSGPSLESLHLTLQKVHKASLALRSM 123

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|348307 vs. uniprot

BLAST of jgi.p|Trimin1|348307 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835Z449_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5JNQ0_9PHAE	4.570e-15	53.06	KIX_2 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A836CHY1_9STRA	2.330e-9	64.81	KIX_2 domain-containing protein n=1 Tax=Tribonema ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 444..464
None	No IPR available	COILS	Coil	Coil	coord: 293..370
None	No IPR available	COILS	Coil	Coil	coord: 72..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1038..1062
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 795..820
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 663..700
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 565..594
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 875..899
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 870..899
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 577..594
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 408..441
None	No IPR available	PANTHER	PTHR25952	FAMILY NOT NAMED	coord: 339..1073
None	No IPR available	PANTHER	PTHR25952:SF234	SUBFAMILY NOT NAMED	coord: 339..1073

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_22	contig	Contig_22:749990..755628 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|348307	mRNA_6398	Tribonema minus UTEX_B_3156	mRNA	Contig_22 749990..755628 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|348307|estExt_Genemark1.C_Ctg_220087 ID=Trimin1|348307|estExt_Genemark1.C_Ctg_220087|Name=jgi.p|Trimin1|348307|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1243bp
MDGKCELSRLDRESYTRQITCFLAELERKDRHDAVLFQLAGKFEAQIFEA
ASNASDYQVRITRKLMRVKEIRQQQQARNQQQQQMLQQAQAHQQQQHQQR
QHTQSLPPPPTQAQQQLQAHQQHRQLQQQQQFHDDGRGNGASAAQLQRIF
EMRGESCSPHIQQQHQQQAGGGRQWPTMQPPPQQQDPQQMSISPALPPQQ
QPLRQQKQQQGMGSLSAYAAQQQANLQAVQAQQTQALNAQHEAQQAQLLT
HQLQQRNTARGGDLGHQQQQQRALMEQQAAQWRRLEVQQAQQRQQAEHAL
AAQQQRQQQQQQHEQQLAQQQQQQQQQQRRAQQEAAAAQQRQAAAAAAAQ
QEAQQQQQRAQQRQQEAAAAARHQALLVQQLAQQQAQQQQQQQRLDYMNR
MQMQQQQQQHAQHLPGIGGGSGGGAAAARSPAEVDTPQQQAARVECAEQL
RRRYEADIRAFVQQGRSVLLKHDGSPRSMAAHGSGGADQIRKLRQYVREG
QNALVYMERCHSRGHVPSAVSLQSLEQTLAKVHCASRTLRQMMLCAAAGP
AGAAAAAAQRGYHAAAAPPPPLRGAQQLSLDAQQQQRLYANGGAGSSSSG
IGGISGGCGDLALDPAIDDLEPIPLPDAYCNGSGGGGVGGNFNWKLPRGS
ASPPATALLKLEPTLAKRKPKAEPQWAPPAALSGAAAEPKPEPQQQLSVD
AFLLGADDALALPDMEPIPFGDAYGGSGGGGGATDMLSAANDDLGFSLLD
AEDFLLDMSDLDTLGWHGGGGGGGSGSSGADALLSRQGSWAAHDAFDAHA
DAVEAPLPPSSSAGSGGSAAMPAPNADASLAMAAPTATALAAAPLAASKP
DATPRAAAIAVTVSPPPLVPTPVVVPDGSSSSSSGGSSDGSSAGGGSLKR
MSDCSSADCGPPDGKRVCVQQESGGGAAGGGGGGGSGDGVGACAAMTTLQ
SQHQTPSPPSAPVAALLRQLQGAVGADFAFRAETAAADDDGSGGSGRLLR
LHASCGGAFCVCVAFAARDDAYPCDVAVLAPSEVPPPLPPLPAARRGGAD
AGAGADGATPPPASTRAACQRATAHARQVLRAMVHGPLCPLTSRPSSKHT
LIASSQVLRAMVEGDGGRDDGAASALIGFFKWVVTYRGALQEACAAGSSC
SSGGAAAAPAAALDTSLLVLDGAGAAAAASPVGAKGQASLLSGMPGDGAV
AAAAAAAADGGGDSVCADVGAGGGGGGGSDVSGALDDTAIVC*