mRNA_6393 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|162804
Unique Name	mRNA_6393
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|162804 vs. uniprot
Match: A0A835Z0N3_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0N3_9STRA)

HSP 1 Score: 261 bits (667), Expect = 1.380e-75
Identity = 493/493 (100.00%), Postives = 493/493 (100.00%), Query Frame = 1

Query:    1 MLSRPPLADCRVNKRWGWRRAMALVEDMEAAGVAARLEHFRSAVVACSKTKQXXXXXXXXXXXXXXXXXPDVQTMTXXXSSCPPQQADDALSXXXXXXXXXXXXXXXXXXXVLSICAQAGRWASTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGRVAEAEDALHEMAGGAALAXXXXXXXXXXXXXXXXXXXGQRVLDLFEEMVAAGVKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAEGGALEPDRVTXXXXXXXXXXXXXXXXXXXXLDDMRQRGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQCFGDARLWGRAVQLIEEIKTAGAGMPDAVXXXXXXXXXXXXXXXXXXXXXXXDMIACGVE 1479
            MLSRPPLADCRVNKRWGWRRAMALVEDMEAAGVAARLEHFRSAVVACSKTKQXXXXXXXXXXXXXXXXXPDVQTMTXXXSSCPPQQADDALSXXXXXXXXXXXXXXXXXXXVLSICAQAGRWASTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGRVAEAEDALHEMAGGAALAXXXXXXXXXXXXXXXXXXXGQRVLDLFEEMVAAGVKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAEGGALEPDRVTXXXXXXXXXXXXXXXXXXXXLDDMRQRGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQCFGDARLWGRAVQLIEEIKTAGAGMPDAVXXXXXXXXXXXXXXXXXXXXXXXDMIACGVE
Sbjct:    1 MLSRPPLADCRVNKRWGWRRAMALVEDMEAAGVAARLEHFRSAVVACSKTKQXXXXXXXXXXXXXXXXXPDVQTMTXXXSSCPPQQADDALSXXXXXXXXXXXXXXXXXXXVLSICAQAGRWASTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCGRVAEAEDALHEMAGGAALAXXXXXXXXXXXXXXXXXXXGQRVLDLFEEMVAAGVKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAEGGALEPDRVTXXXXXXXXXXXXXXXXXXXXLDDMRQRGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQCFGDARLWGRAVQLIEEIKTAGAGMPDAVXXXXXXXXXXXXXXXXXXXXXXXDMIACGVE 493

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|162804 vs. uniprot

BLAST of jgi.p|Trimin1|162804 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835Z0N3_9STRA	1.380e-75	100.00	PPR_long domain-containing protein n=1 Tax=Tribone...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_22	contig	Contig_22:699312..707441 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|162804\|e_gw1.22.192.1
Hectar predicted targeting category	other localisation
TranscriptId	163126
Track	FilteredModels1
ProteinId	162804

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|162804	gene_6393	Tribonema minus UTEX_B_3156	gene	Contig_22 699312..707441 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|162804	Trimin1\|162804\|e_gw1.22.192.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_22 699312..707441 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_6393_1	exon_6393_1	Tribonema minus UTEX_B_3156	exon	Contig_22 699312..699618 +
exon_6393_2	exon_6393_2	Tribonema minus UTEX_B_3156	exon	Contig_22 700316..700554 +
exon_6393_3	exon_6393_3	Tribonema minus UTEX_B_3156	exon	Contig_22 701448..701570 +
exon_6393_4	exon_6393_4	Tribonema minus UTEX_B_3156	exon	Contig_22 702103..702225 +
exon_6393_5	exon_6393_5	Tribonema minus UTEX_B_3156	exon	Contig_22 703000..703025 +
exon_6393_6	exon_6393_6	Tribonema minus UTEX_B_3156	exon	Contig_22 703065..703311 +
exon_6393_7	exon_6393_7	Tribonema minus UTEX_B_3156	exon	Contig_22 703939..704172 +
exon_6393_8	exon_6393_8	Tribonema minus UTEX_B_3156	exon	Contig_22 705079..705198 +
exon_6393_9	exon_6393_9	Tribonema minus UTEX_B_3156	exon	Contig_22 706276..706383 +
exon_6393_10	exon_6393_10	Tribonema minus UTEX_B_3156	exon	Contig_22 707172..707441 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_6393	CDS_6393	Tribonema minus UTEX_B_3156	CDS	Contig_22 699312..699618 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_22:699312..707441+
coding sequence from alignment at Contig_22:699312..707441+

spliced messenger RNA

>mRNA_6393 ID=mRNA_6393|Name=jgi.p|Trimin1|162804|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1797bp|location=Sequence derived from alignment at Contig_22:699312..707441+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTTTCTCGCCCGCCCCTCGCTGACTGCAGAGTCAACAAGCGGTGGGG
CTGGCGGCGCGCGATGGCGCTCGTGGAGGACATGGAGGCGGCGGGCGTCG
CGGCGCGCCTCGAGCACTTCCGCAGCGCCGTCGTCGCGTGCAGCAAGACC
AAGCAGTGGCGGCACGCGCTGCCGCTGCTGGCGCGCATGCGCGCGGCGGG
CGCGGTGCCGGACGTGCAGACCATGACGGCGGCGATCTCTTCGTGCCCGC
CGCAGCAGGCGGACGACGCGCTGTCGCTCATGCAGGAGATGCGCAGCGAG
GGCCTCGCCCCGAATGAGGTGACATACAACGTGGTGCTGAGCATCTGCGC
GCAGGCGGGGCGCTGGGCGAGCACTGCCACGCTGCTGGAGGAGATGCGCT
CGGAGGGCCACCAGCCGACGCCGTACCAGTACAACTGCGCGTTTGCGGCG
TGCGAGCGGTCGCAGCGCTGGCGCGAGGCGGTCGCGCTGTACCGCCGCAT
GCGCGCCGACGGGCTGCGGCCGACGGCGCTGTCGTACACGCACCTGGTGA
GCGTGCTGGAGCGCGGCAAGCGGCGCAAGCAGGCGGTGGCGGTGCTGGAG
GAGATGCTGGCGGAGTCGCCGCGCGAGAGCGTTGTCAACTTCAACATCCT
GATGAACGCGTGCGCCAAGGCGCGCCACTGGGTGCACGCGGCGGCGCTGT
TTGCGGAGATGCGGGCTGCAGGCATCGCGCCTGACGTCGTCTCGTACAAC
ACGCTCATCAACGCGTACGCGCGGTGCGGGCGCGTCGCGGAGGCAGAAGA
CGCGCTGCACGAGATGGCCGGCGGCGCTGCGCTCGCCGCCCCCGACGTCG
TCACGTACGGCACGGTGATGCAAGCGTGCGCCGCGTCGGGCCAGGGGCAG
CGCGTGCTGGACCTGTTTGAGGAGATGGTCGCGGCGGGCGTGAAGCCGAA
CGTGATGGCGTACCGCGGGTGCATCATCGCGTGCGAGCAGCGCGGGCGCT
GGGAGGAGGCGCTGGCGCTGTTTGACCGCATGTGCGCGGAGGGCGGCGCG
CTGGAGCCGGATCGGGTCACATACAACAGCGCGATCGCGTGCTGCGCGCA
CCTGCGGCTGTGGCGGCGCGGCGTGGCGCTGCTCGACGACATGCGGCAGC
GCGGCGTCACGCCCGACCAGTACTCGTACAACAGCGCCGTCGCGGCGTGC
GTCAAGGCGCGCCAGACGCAGCAGATGGCCGCCGTGCTCGCGCGCATGCG
CGAGGCGGGCTTCTCGCCGGACCTCGTCACGTACAGCAACCTCATACAGT
GCTTTGGCGACGCGCGCCTCTGGGGACGCGCCGTGCAGCTGATCGAGGAG
ATCAAGACGGCGGGCGCGGGCATGCCGGACGCCGTCTGCTACAACGGCGC
TATTAACGCGTGCGCCAAGTGCGGCGAGTGGGAGCACGCGGAGCAGCTGG
TTGAGGACATGATTGCGTGCGGCGTGGAGCCGGACACCATAACGTACAAC
AGCCTCCTGAATGCGTACGCGAAGAAGGGCGAGTGGGCCAAGGCGCTCAC
GGCGCTGGAGACGATGCGCGAACGCGGCATCACGCAGAGCGCCATGACGT
TCGGCGCGGCGATACAGGCGTGCGAGCGCGCGCGGGAGTGGGAGCGTGCG
GTGGCGCTGCTCAGCAAGGCGACCGCCGCAGGCGTGCCGCCGACGACATT
TGCGTACAACTTTGCCATGAGCGCGTGCGTGCACGCGGGGCGCCTCGACC
GCGCGCTGGAGCTGCTGGAGGAGATGAAGGGCAAGGTGTACATGTAG

protein sequence of jgi.p|Trimin1|162804

>Trimin1|162804|e_gw1.22.192.1 ID=Trimin1|162804|e_gw1.22.192.1|Name=jgi.p|Trimin1|162804|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=599bp
MLSRPPLADCRVNKRWGWRRAMALVEDMEAAGVAARLEHFRSAVVACSKT
KQWRHALPLLARMRAAGAVPDVQTMTAAISSCPPQQADDALSLMQEMRSE
GLAPNEVTYNVVLSICAQAGRWASTATLLEEMRSEGHQPTPYQYNCAFAA
CERSQRWREAVALYRRMRADGLRPTALSYTHLVSVLERGKRRKQAVAVLE
EMLAESPRESVVNFNILMNACAKARHWVHAAALFAEMRAAGIAPDVVSYN
TLINAYARCGRVAEAEDALHEMAGGAALAAPDVVTYGTVMQACAASGQGQ
RVLDLFEEMVAAGVKPNVMAYRGCIIACEQRGRWEEALALFDRMCAEGGA
LEPDRVTYNSAIACCAHLRLWRRGVALLDDMRQRGVTPDQYSYNSAVAAC
VKARQTQQMAAVLARMREAGFSPDLVTYSNLIQCFGDARLWGRAVQLIEE
IKTAGAGMPDAVCYNGAINACAKCGEWEHAEQLVEDMIACGVEPDTITYN
SLLNAYAKKGEWAKALTALETMRERGITQSAMTFGAAIQACERAREWERA
VALLSKATAAGVPPTTFAYNFAMSACVHAGRLDRALELLEEMKGKVYM*

mRNA from alignment at Contig_22:699312..707441+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6393 ID=mRNA_6393|Name=jgi.p|Trimin1|162804|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8130bp|location=Sequence derived from alignment at Contig_22:699312..707441+ (Tribonema minus UTEX_B_3156 )
ATGCTTTCTCGCCCGCCCCTCGCTGACTGCAGAGTCAACAAGCGGTGGGG
CTGGCGGCGCGCGATGGCGCTCGTGGAGGACATGGAGGCGGCGGGCGTCG
CGGCGCGCCTCGAGCACTTCCGCAGCGCCGTCGTCGCGTGCAGCAAGACC
AAGCAGTGGCGGCACGCGCTGCCGCTGCTGGCGCGCATGCGCGCGGCGGG
CGCGGTGCCGGACGTGCAGACCATGACGGCGGCGATCTCTTCGTGCCCGC
CGCAGCAGGCGGACGACGCGCTGTCGCTCATGCAGGAGATGCGCAGCGAG
GGCCTCGGTGAGAGGGGGCTGGTGTACTTGAGTGAACCTTGTACTTTGGC
TGTACTCAAGTGAATCATCAGTTTACTCTACTTAGGTGTATCAGAAGAAG
AAGTAGGCGGACGACGCGCCGTCGCTCACGCAGGAGATGCGCAGCGAGGA
CCTCGATGTGAGCTGCTGGTGTACTAGGGGGCGAATCTTCAGTGTACGCT
AGCTGCATTTCAGGGAGAAGCAGGCGGATGATGAGCTGTCGCTCATGCAG
CAGATAAGCGGCGAGGGCCTCGGTGAGAGACAGCTAATCGCGGTGATGGT
GCACCTGCAGTGAACAGCTTAGTGTATCCTCTGATGCCAATGTACTTGAA
CGATCTGCTCTGTAGAGTCTCATAGTACTCTGCGGCAGCTGGAGCACGAC
GCTCTACCGCTGATGCAGGAGATGCGCAACGAGGGCCTCGGGATGGGACT
GGTGCACTGCAGTGAATTTCAGTATCCTTCGGCTGTACTTCAAGAAGCAG
GCGGACAAGGTGCTTTCACTCATGCTGGACATGCGCAGCAGCCAGGGCTT
CGGGGTGAGCGCTGATGTGCTCAGTGAGGCCTCTGGTGCGCTCTGACTAT
ACTGCAAGTGCACACTTCAAGTGCCGACTGGCGCAGTTCCGCCGGTGGTG
GGGCGTCACCTAACACTTCTGCCCTCCCCCCCTCCCCTTCCCCCTCATGC
GCAGCCCCGAATGAGGTGACATACAACGTGGTGCTGAGCATCTGCGCGCA
GGCGGGGCGCTGGGCGAGCACTGCCACGCTGCTGGAGGAGATGCGCTCGG
AGGGCCACCAGCCGACGCCGTACCAGTACAACTGCGCGTTTGCGGCGTGC
GAGCGGTCGCAGCGCTGGCGCGAGGCGGTCGCGCTGTACCGCCGCATGCG
CGCCGACGGGCTGCGGCCGACGGCGCTGTCGTACACGCACCTGGTGAGGG
GAAACTAAAGTTGAAATTGGCGTTACTTGCAGAAAGCGGCAGCGTGAGGC
GGTCGCGCTGCACCGCCGCATGCGCGCCAAGAGGCTGCGGCCGACAGCGC
TGTCGTACACGCACCTGGTGAGGGGATCACTGTATAAAATTGAAGTTGAG
CTCAAACTTGAAGTTAGTACGTGACGCCCCAGTGACGGCGCCTAGAGGGA
TCTGTCTGTGAAGCGCAGTTGAACTTGAAGTTGATACTTGACACGCCCCA
GTGATGGCGCGAGCCTGTCGCGGTGTACAGGCGCTTGCGTGCCGACAGGC
TGCGGTTGACGACGCAGTCGTACACGCACCTAGTGAGGGGGGGGGGCTGT
ATGAAGTTGATTTCACATCCGCTGTCCAGGCCTTCACATGGAATACGTTG
CTGTTGCCGGTCTCGTCGGTGGTTGCAAGCGCGGCGCGCAAAGTGCAGGC
CCGCGCCGCTGCAGTGCGCGATCCGATTTACTGTGTTCGCTGGTTTCAGG
GCCTTTGAGGTGGCGCGCTGCACCCGCGGTCGCGCACGGTCTGCAGCGCT
GCGCCGCTGCGCTGCGGCCCGCGCCGCGGCCCCCGCGCTCTCCTCGTCTG
AGCGCTGATGACGTGAGCAGGCAGCGGTATGCTGCGCGCTGTGCCCGAGG
AATTGGTGCAACTTCGAGGAGCTGTCTCTGTCCAACTGCTTCTCGGACGT
GCATACGCAAAACGCCTCCCACCGAGGCGCTTTCGCTCCTTGACGTTTGC
TCACAGCATCGTCGACAGCTTGCACTGGCATGCAAACACACTGTTGTCCG
CTGTTGTCCGCCCCCCGCGTTTGGCTTCATCCGCTCACTTGAAGTCTGTG
CGCGGCGCCGTCACTGCGTCTGCTCTGCGGCGGCAGGTGAGCGTGCTGGA
GCGCGGCAAGCGGCGCAAGCAGGCGGTGGCGGTGCTGGAGGAGATGCTGG
CGGAGTCGCCGCGCGAGAGCGTTGTCAACTTCAACATCCTGATGAACGCG
TGCGCCAAGGTGAGCGCGGCGCGCCAAAACTGTTGACTACCAGCAAATGC
GATTGGGATTTAGAAGTATTATCTTTGAGTAGTTAAAGTTGATTCATTTT
GAAAAAGCTAGTCGCGGCGGCGCCTGTCATCTTCAACCGGTGATGCTGCG
CTTTGCCTGCCGCGTGCAGGCACCCATGTCAACGGCTGTCTGACCGCCAG
TCATTTTGAGCCTGGCATGCCTACCAGTTGTTTTGAGTCTGGCGTTGTTG
CAGTGTATGTCTGCCACGCATCCGCTGCACGCACTCTGTCACTCACGCGC
CACCCCACTGCATTCTGTGTTTGTTGTGGTGCATGCAACGCCGTGCTTCA
GTGCGAGGCTGTTGACGTCTCTCGTTGGCCGCGCAAGACTGCCGATGGGG
CGGCACGCGGCGACGCTGTCTGTGCAGCCTTCCGCTGTGAATTCACACTG
CAGCGTGGGTTTGTCATTGTGCATATATGACGCCTGCCGCTGCATCTCAC
CACTGTTGAGGCTGACAAATGCATCGCTCCCGATTGGCCAGGCGCGCCAC
TGGGTGCACGCGGCGGCGCTGTTTGCGGAGATGCGGGCTGCAGGCATCGC
GCCTGACGTCGTCTCGTACAACACGCTCATCAACGCGTACGCGCGGTGCG
GGCGCGTCGCGGAGGTGAGGCCGCATGCATACATACCTAGGGTAGCGTCA
CCACTTTAACTTCAAGTGCTCCACATGTGAAGCTGCGTCGCTCACGAGGC
ATTCATTGTGAAATCCGCAGTAGCACAGATATCATGCCGACGTTGCTGTA
AGCCGGCGCAGTGAACTTCAAGTGCTGCGCATCTGCAACCGTGCAGTACG
CGAGCGCGAATCTGAAACGCGCAGTCCCGAGCACGGCGCAGGCATCGTAG
CGCTGTCCACAGCTGTCTCCACGGGATGGTGCTGGCGACACGCCGCAGGC
ATTGAGGCATTGTGTGCCGCAGCGGCGCTGGCGCGAACTACGCCACCGCA
GCCTGCGGTGTCGGCAGGCAAGCGTCCACGTGGGAGCGATGTCTGCAGCT
CACACTGAGCACGGATGCTTTGTGATGCAAGCAGAGGACGCTGGCGCCAG
CGGTGAGCGCTGACGGCAGCGGCAGCGGCGGGAGATGCGCGGGACGCGCC
GCGTGCCGCAGGTGCCGCGACAGCGGCAGCAGCGGCGGCAGCAGAGGCGG
CGGCGGCGGCGCCACCATCGCCCTGTCAGAATTGCGTAGATGCCACGTCT
CAGCGCTGATGTTATGCAATGCGAGACACGTGTCACCGAGGTCCCGCAAT
AACTGCCGCAGCCACATTCTCTCACGGCGCAACTCTCTGTGGTGAAAGGC
AAGGTGCAGTGTATGTTACGGCAGCTTCTCAAAAACTTGAAATAATTCAC
ATAAACGTCAGATTACTCACGCGCGCCCCGCGCCGCAGGCAGAAGACGCG
CTGCACGAGATGGCGTGCGCGGCGGCCGCGGCGGCGGCGGCGCCCGGCGG
CAGCGGCGGCGCTGCGCTCGCCGCCCCCGACGTCGTCACGTACGGCACGG
TGATGCAAGCGTGCGCCGCGTCGGGCCAGGGGCAGCGCGTGCTGGACCTG
TTTGAGGAGATGGTCGCGGCGGGCGTGAAGCCGAACGTGATGGCGTACCG
CGGGTGCATCATCGCGTGCGAGCAGCGCGGGCGCTGGGAGGAGGCGCTGG
CGCTGTTTGACCGCATGTGCGCGGAGGGCGGCGCGCTGGAGCCGGATCGG
GTGAGCTTGCGCAGCCGCGGCGTACGTACAACATGTCTACATGTATATTT
ATATCCAATTGGTGACAGTATAAGCATGTACCAATGTACCTTCACACTCA
TGTGCACATGAAGAAGTACCAGTGTACTCACATGCTTTGAAGTACATGAA
TCGGGTGAGCTCGCGCAGCCGCAGCGGCGTGTGCTCAATAGTATCATCGT
CCAGGATATGCATATACATCCACATACGCAGTGTACAAGCGACTGGCCCG
CTTAGGGTTGAGATAGGGTTAGGATTAGGGTTAGGCACCGGCCCGCTTGC
ACGCGATTCTTGCCTGCACTGCGACCGGGGCAAGCTGACGACGGGCGGCA
GTTGACGCCGCGGAGCGCCTGCAGCTGCACGTGTCGCGAGCCGTTTCTGC
AAAAGCGCGCTCGTGTGACAGCGCACGCAGGCGCAACAGCGCTGCCGCCG
CCGTTGAGTTGCGCGTCTCTCGCCGGGCGTTGCGCGTGAGAATCCTGACG
CTTAGGGGGGGGGGGCGACAGCCTGACCTAGAACACATGCCGGCGCCGCC
GAAGATTGCTTACACGCGCCCCCGCTGCCGCACAACGCCCCCCCCCCCCC
CCCCCCCCCCTTCCCCTGCCTCGGCAGGTCACATACAACAGCGCGATCGC
GTGCTGCGCGCACCTGCGGCTGTGGCGGCGCGGCGTGGCGCTGCTCGACG
ACATGCGGCAGCGCGGCGTCACGCCCGACCAGTACTCGTACAACAGCGCC
GTCGCGGCGTGCGTCAAGGCGCGCCAGACGCAGCAGATGGCCGCCGTGCT
CGCGCGCATGCGCGAGGCGGGCTTCTCGCCGGACCTCGTCACGTACAGCA
ACCTCATACAGGTGCGCGCGCAACGACGCCACACCATCATCTGCAGTACT
CCAACTTCGTGTAAGGTCAACTGCGTGTAGCTGTTTGATGTGCTGTGCGC
ATGCGCGAGGCGGGCTTCTCGCCGGACCTCGTCACGTACAGCAACCTCAT
ACAGGTGCGGGTCTCATCTGCAGTACTTCAACGATTTCATGTAACTTCAA
CTGTGATGTGCTGCGCGCATGCGCGAGGCGGGCTTCTCGCCGGACCTCGT
CACGTACAGCAACCTCATACAGGTGGGTCTCGTCTACATATGCTTCTACT
TCACTGACGTCAGTTCAGCGCTCTACCATGTCTCGACAGCACCCTCTCCT
GCCATGTGCTCCCCCCCCCCCCCCCTTCCCCTCCTGCCGTTGCACCGTGC
CGCAGTGCTTCGGCTACGCACGTTTCTGGGGGCAGGTCGATTCTCAGAAT
CAGTTGTCGGACGACCAACAGGCGCTGTTAAGATCGTTTGCTAACGCTAA
TTTGACGCTCCACAACATCTCGACAGCACCCCCCCCCCCGTTCCCCTCCT
GCTGCTGCACAGTGCTGCAGTGCTTCGGCGATGCTCGCCTCTGGGGGCAG
GTCAATCCTCGGAATCTTTGTCAGACGACCAACAGGCGCTGTTACGATCG
TTCGCTAACGCTAATTTGACGCTCCACAACATCTCGACAGCACCCCCCCC
CCCCTTCCCCTCCTGCTGCTGCACCGTGCTGCAGTGCTTCGGCGATGCTC
GCCTCTGGGGGCAGGCCAATCCTCGGAATCTTTGTCGGACGACCAACAGG
CGCTGTTGGGATCGTTCGTTTACGCTTCTTTGACGCTCCACAGTGTCTCG
ACAGCACCCCTCACGCCATGTGCCCCCCCCCCCCCCCCCCCCCCCTCTCT
GTTGCACCGTGCCGCAGTGCTTTGGCGACGCGCGCCTCTGGGGACGCGCC
GTGCAGCTGATCGAGGAGATCAAGACGGCGGGCGCGGGCATGCCGGACGC
CGTCTGCTACAACGGCGCTATTAACGCGTGCGCCAAGGTGAGCCGCGCGC
GCGCTGCGCCCCGCGCATTCATCGCGCTCCTGCGCTCCCCAGAGCGTGCC
AGCGAGCGACGCTAGCGCGTGCCGCGGCGGCGGCGGCGCACGGCCACCGC
CAGTCAGCGCAGCATGACCGTGCGCTCGCTGCGAAGTCGCTGCGCACGCG
CGTTACTTGCTCAAAGCTCGCTGTTCCCAGTCCGGCCAGCTTGCATCTTG
GTCGTTCCGTGCGCATGAAGCTTGCTGCTCTTAAGGTCGTTAAGCACGAG
CCGTTGTGACGGCGTAGCATCGTCAGCCTTTGTGAGGTGCGGCGGCCGTG
CGCGGTTCACACTGTTTGCTGCAGCGCGCCGTCAACGCACACGCGAAGGC
AAGCCTGTCCTGCTTTCTTGTTGTCTGTGATGGTGTTGCATATGCTGTGG
AGAGACGGCTGCAGCGGGTGACTGAGCACCGCTGCCAGTATGCGCAGACG
ACTTCCCGTCTCGTGCTTATGGTGCTGCGTGCGGGGCAGCAGCATTGCCG
CAGTGGCGCAGGGCGCCAGCGAAGAACCGAGCATCGTCACCTTTGCCACA
CAGATTTCCAGCACCTCTGATCCTGTCCCCAATGCTGTGCGCAGTGCTGC
TGCTGCGGTGCGGCGCGGCGCGGCAGTGAGCAAGCATCACTGCCGTTCGT
GTACGGATTCTGTGAAAGCGAATTTCTGCTGTCCGTGATACTACTGCGGG
TGGTGCCGCCGCTGCGGCGCGCCCGCTGCGATGCAGTGCCGCGCAGCACT
GCCGCCTCTCGCTTCGACATTGATGTTTCTCCCATTTGCTCGATGCTGTG
CGCGGCGCCGCTGCAGCACAGTGCTGCCACTATGATGTGGTGCTGAACTG
CTGTGCTCCTTTCTGTCATTGGTGCTGCCTGCTGCTGTGGCGCAGTGCGT
CTTCGAGCGAGCATCGCTGCCGTTACTTTACGGAGTCATTGAAAGCACAT
TCCTCCTGTCCATGCTGCTGCGCACGGCGCTGCCGCTGCGGCGCGGCGCT
GCGCAGCACTGCTGCCACGCTTGTTCATCTTCTCTTCTGTCAATTGATGC
CTTGCGCGGCGCAGTGCGGCGAGTGGGAGCACGCGGAGCAGCTGGTTGAG
GACATGATTGCGTGCGGCGTGGAGCCGGACACCATAACGTACAACAGCCT
CCTGAATGCGTACGCGAAGAAGGTGCGTGAGGTTGCCGGGGGGGGGCGTG
GCAGGATGCCAAGGGGGGGGGGGATCTCAGGCCTTGGGGTACAGTCGTGA
TGGCACGTATCGCCTGCTGCATCTTGTGGCTTGTGAGTGCATGCTGTGAG
ATCAAAAGTCTAACTCGCCACGCGCCCTGAGGTGCCTCGGACGTGCATGG
ATGCGCGAGTAATGCGTCAATGTTGAAGTCGAGCCGCTCAAAAGTGGTGT
GGTCGACCCCCAGCAAATGGTGCAGGGGCAGCAATACGCGCCCGCTTTGC
ATACTCCCAGTGAAGCAAGACTGCCCCCCCCCCCCCTCCCCCCCTTAATG
GCACCGCCGCCGCATCTACAGGGGCGAGTGGGCCACGGCGCTCACGGCGC
TGGAGACGATGCGCGAGCGCGACATCACACTGACTTTCTGCCACATCAAA
GTTGAAGTTGATTTTTTCAAGTTTGAATTTGACCTAGAATTGAGGTTGCT
CCGACCGGCACTCGCAGGGCGAGTGGGCCAAGGCGCTGACGGCGCTGGAG
ACGATGCGCGAGCGCGGCATCACGCTTACTTTGCCGCATCATTGTTGAAG
TTGACCCACCCCGAATAGGCAAGTTGACTCACCTAAACTTTGAAGGCAAT
CCAGCCGCCGCGGCCTTCGCTCTCTACAGGGCGAGTGGGTCAAGGCGTTG
AAGAGGCTGGAGACGATGCGCGAGGGCGGCACACACACTTTACTGACTAA
TCAAAGTTGAAGGTGACCCCTTTGACCCAGACTTGAGGTTGCTCCACCCG
CACGGCGCAGGGCGAGTGGGCCAAGGCGCTCACGGCGCTGGAGACGATGC
GCGAACGCGGCATCACGCAGAGCGCCATGACGTTCGGCGCGGCGATACAG
GCGTGCGAGCGCGCGCGGGAGTGGGAGCGTGCGGTGGCGCTGCTCAGCAA
GGCGACCGCCGCAGGCGTGCCGCCGACGACATTTGCGTACAACTTTGCCA
TGAGCGCGTGCGTGCACGCGGGGCGCCTCGACCGCGCGCTGGAGCTGCTG
GAGGAGATGAAGGGCAAGGTGTACATGTAG

Coding sequence (CDS) from alignment at Contig_22:699312..707441+

>mRNA_6393 ID=mRNA_6393|Name=jgi.p|Trimin1|162804|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1797bp|location=Sequence derived from alignment at Contig_22:699312..707441+ (Tribonema minus UTEX_B_3156 )
ATGCTTTCTCGCCCGCCCCTCGCTGACTGCAGAGTCAACAAGCGGTGGGG
CTGGCGGCGCGCGATGGCGCTCGTGGAGGACATGGAGGCGGCGGGCGTCG
CGGCGCGCCTCGAGCACTTCCGCAGCGCCGTCGTCGCGTGCAGCAAGACC
AAGCAGTGGCGGCACGCGCTGCCGCTGCTGGCGCGCATGCGCGCGGCGGG
CGCGGTGCCGGACGTGCAGACCATGACGGCGGCGATCTCTTCGTGCCCGC
CGCAGCAGGCGGACGACGCGCTGTCGCTCATGCAGGAGATGCGCAGCGAG
GGCCTCGCCCCGAATGAGGTGACATACAACGTGGTGCTGAGCATCTGCGC
GCAGGCGGGGCGCTGGGCGAGCACTGCCACGCTGCTGGAGGAGATGCGCT
CGGAGGGCCACCAGCCGACGCCGTACCAGTACAACTGCGCGTTTGCGGCG
TGCGAGCGGTCGCAGCGCTGGCGCGAGGCGGTCGCGCTGTACCGCCGCAT
GCGCGCCGACGGGCTGCGGCCGACGGCGCTGTCGTACACGCACCTGGTGA
GCGTGCTGGAGCGCGGCAAGCGGCGCAAGCAGGCGGTGGCGGTGCTGGAG
GAGATGCTGGCGGAGTCGCCGCGCGAGAGCGTTGTCAACTTCAACATCCT
GATGAACGCGTGCGCCAAGGCGCGCCACTGGGTGCACGCGGCGGCGCTGT
TTGCGGAGATGCGGGCTGCAGGCATCGCGCCTGACGTCGTCTCGTACAAC
ACGCTCATCAACGCGTACGCGCGGTGCGGGCGCGTCGCGGAGGCAGAAGA
CGCGCTGCACGAGATGGCCGGCGGCGCTGCGCTCGCCGCCCCCGACGTCG
TCACGTACGGCACGGTGATGCAAGCGTGCGCCGCGTCGGGCCAGGGGCAG
CGCGTGCTGGACCTGTTTGAGGAGATGGTCGCGGCGGGCGTGAAGCCGAA
CGTGATGGCGTACCGCGGGTGCATCATCGCGTGCGAGCAGCGCGGGCGCT
GGGAGGAGGCGCTGGCGCTGTTTGACCGCATGTGCGCGGAGGGCGGCGCG
CTGGAGCCGGATCGGGTCACATACAACAGCGCGATCGCGTGCTGCGCGCA
CCTGCGGCTGTGGCGGCGCGGCGTGGCGCTGCTCGACGACATGCGGCAGC
GCGGCGTCACGCCCGACCAGTACTCGTACAACAGCGCCGTCGCGGCGTGC
GTCAAGGCGCGCCAGACGCAGCAGATGGCCGCCGTGCTCGCGCGCATGCG
CGAGGCGGGCTTCTCGCCGGACCTCGTCACGTACAGCAACCTCATACAGT
GCTTTGGCGACGCGCGCCTCTGGGGACGCGCCGTGCAGCTGATCGAGGAG
ATCAAGACGGCGGGCGCGGGCATGCCGGACGCCGTCTGCTACAACGGCGC
TATTAACGCGTGCGCCAAGTGCGGCGAGTGGGAGCACGCGGAGCAGCTGG
TTGAGGACATGATTGCGTGCGGCGTGGAGCCGGACACCATAACGTACAAC
AGCCTCCTGAATGCGTACGCGAAGAAGGGCGAGTGGGCCAAGGCGCTCAC
GGCGCTGGAGACGATGCGCGAACGCGGCATCACGCAGAGCGCCATGACGT
TCGGCGCGGCGATACAGGCGTGCGAGCGCGCGCGGGAGTGGGAGCGTGCG
GTGGCGCTGCTCAGCAAGGCGACCGCCGCAGGCGTGCCGCCGACGACATT
TGCGTACAACTTTGCCATGAGCGCGTGCGTGCACGCGGGGCGCCTCGACC
GCGCGCTGGAGCTGCTGGAGGAGATGAAGGGCAAGGTGTACATGTAG