mRNA_6356 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: A0A836CIY8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIY8_9STRA) HSP 1 Score: 557 bits (1436), Expect = 1.190e-196 Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 1
Query: 1 MVQTFERPDMLSYWAAEDDKQPDGDGMGEAEGKKRRRKRDTRKHPAAPVQCRSAYVLFSIHRRQELKEQRPDVKTRDLMGIIAQEWRALERGARERWQARAXXXXXXXXXEKAAYAGPLRVPSRRRWVSAHPDAPKKASNAYLEFCRARRPALQAHYPHVASAALSKMLAEAWARLSAEERAPFVACALVDKARYRSDMAAFTAAXXXXXXXXXXXALQQFSDAEXXXXXXXXXXXXXXXXXXXXCVNSSXXXXXXXXXXXXXANTGGVGVRGIGGWCSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCEFGHRANDMVNERLGATSASAAEQGYDLLMSPGCDSLQXXXXXXXXXXXXXXXXXAGMHDGFAGDGDWLAAGDGDDDELQLCGLQDP 1197
MVQTFERPDMLSYWAAEDDKQPDGDGMGEAEGKKRRRKRDTRKHPAAPVQCRSAYVLFSIHRRQELKEQRPDVKTRDLMGIIAQEWRALERGARERWQARAXXXXXXXXXEKAAYAGPLRVPSRRRWVSAHPDAPKKASNAYLEFCRARRPALQAHYPHVASAALSKMLAEAWARLSAEERAPFVACALVDKARYRSDMAAFTAAXXXXXXXXXXXALQQFSDAEXXXXXXXXXXXXXXXXXXXXCVNSSXXXXXXXXXXXXXANTGGVGVRGIGGWCSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCEFGHRANDMVNERLGATSASAAEQGYDLLMSPGCDSLQXXXXXXXXXXXXXXXXXAGMHDGFAGDGDWLAAGDGDDDELQLCGLQDP
Sbjct: 1 MVQTFERPDMLSYWAAEDDKQPDGDGMGEAEGKKRRRKRDTRKHPAAPVQCRSAYVLFSIHRRQELKEQRPDVKTRDLMGIIAQEWRALERGARERWQARAXXXXXXXXXEKAAYAGPLRVPSRRRWVSAHPDAPKKASNAYLEFCRARRPALQAHYPHVASAALSKMLAEAWARLSAEERAPFVACALVDKARYRSDMAAFTAAXXXXXXXXXXXALQQFSDAEXXXXXXXXXXXXXXXXXXXXCVNSSXXXXXXXXXXXXXANTGGVGVRGIGGWCSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDCEFGHRANDMVNERLGATSASAAEQGYDLLMSPGCDSLQXXXXXXXXXXXXXXXXXAGMHDGFAGDGDWLAAGDGDDDELQLCGLQDP 399
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: A0A3R7KJP5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KJP5_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.580e-27 Identity = 68/170 (40.00%), Postives = 104/170 (61.18%), Query Frame = 1
Query: 91 EGKKRRRKRDTRKHPAAPVQCRSAYVLFSIHRRQELKEQRPD-VKTRDLMGIIAQEWRALERGARERWQARAXXXXXXXXXEKAAYAGPLRVPSRRRWVSAHPDAPKKASNAYLEFCRARRPALQAHYPHVASAALSKMLAEAWARLSAEERAPFVACALVDKARYRSDM 597
EG K+R KR +K P AP + +S Y+LFS+ +R+E+K P+ K D+M IA W + ++ W+ A E A+Y GPLRVP++R HPDAPK+AS+A+L + + RP ++A + + + +SK L EAWA+ + E++APFV VD+ARY+ +M
Sbjct: 21 EGNKKR-KRLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMSDEDKQPWKVAAEADKQRYEEEMASYDGPLRVPNKR--AKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWAKATDEQKAPFVEKEKVDRARYKREM 187
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: A0A5D6YAG9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAG9_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.820e-27 Identity = 68/170 (40.00%), Postives = 104/170 (61.18%), Query Frame = 1
Query: 91 EGKKRRRKRDTRKHPAAPVQCRSAYVLFSIHRRQELKEQRPD-VKTRDLMGIIAQEWRALERGARERWQARAXXXXXXXXXEKAAYAGPLRVPSRRRWVSAHPDAPKKASNAYLEFCRARRPALQAHYPHVASAALSKMLAEAWARLSAEERAPFVACALVDKARYRSDM 597
+GKKR KR +K P AP + +S Y+LFS+ +R+E+K PD K D+M IA W + ++ W+A A E A+Y GPLRVP++R HPDAPK+AS+A+L + + RP ++A + + + +SK L EAW + + E++APFV +D+ARY+ +M
Sbjct: 44 DGKKR--KRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPDNSKVTDVMRAIADAWAKMTDEDKQPWKAAAESDKQRYEEEMASYDGPLRVPNKR--AKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWGKATDEQKAPFVEKEKLDRARYKREM 209
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: K3WVY6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVY6_GLOUD) HSP 1 Score: 118 bits (295), Expect = 1.870e-27 Identity = 66/170 (38.82%), Postives = 105/170 (61.76%), Query Frame = 1
Query: 91 EGKKRRRKRDTRKHPAAPVQCRSAYVLFSIHRRQELKEQRPD-VKTRDLMGIIAQEWRALERGARERWQARAXXXXXXXXXEKAAYAGPLRVPSRRRWVSAHPDAPKKASNAYLEFCRARRPALQAHYPHVASAALSKMLAEAWARLSAEERAPFVACALVDKARYRSDM 597
+GKKR KR +K P AP + +S Y+LFS+ +R+++K P+ K D+M IA W + ++ W+A A E A+Y GPLRVP++R HPDAPK+AS+A+L + + RP ++A + + + +SK L EAW++ + E++APFV +D+ARY+ +M
Sbjct: 19 DGKKR--KRLQKKAPGAPKRGKSPYILFSMDKREDIKATMPENAKVTDVMRAIADAWAKMSDDDKQPWKAAAEADKQRYEEEMASYDGPLRVPNKR--AKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWSKATDEQKAPFVEKEKLDRARYKREM 184
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: M4BDC0_HYAAE (Uncharacterized protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4BDC0_HYAAE) HSP 1 Score: 118 bits (296), Expect = 2.910e-27 Identity = 69/172 (40.12%), Postives = 104/172 (60.47%), Query Frame = 1
Query: 85 EAEGKKRRRKRDTRKHPAAPVQCRSAYVLFSIHRRQELKEQRPD-VKTRDLMGIIAQEWRALERGARERWQARAXXXXXXXXXEKAAYAGPLRVPSRRRWVSAHPDAPKKASNAYLEFCRARRPALQAHYPHVASAALSKMLAEAWARLSAEERAPFVACALVDKARYRSDM 597
EA G K+R KR +K P AP + +S Y+LFS+ +R+E+K P+ K D+M IA W + ++ W+ A E AAY GPLRVP++R HPDAPK+AS+A+L + + RP ++A + + + +SK L EAW + + E++APFV VD+ARY+ +M
Sbjct: 48 EASGGKKR-KRLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMGDDDKQPWKVAAEADKQRYEEEMAAYDGPLRVPNKR--AKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWGKATDEQKAPFVEKEKVDRARYKREM 216
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: A0A397DXE2_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DXE2_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.360e-24 Identity = 63/177 (35.59%), Postives = 102/177 (57.63%), Query Frame = 1
Query: 70 GDGMGEAEGKKRRRKRDTRKHPAAPVQCRSAYVLFSIHRRQELKE-QRPDVKTRDLMGIIAQEWRALERGARERWQARAXXXXXXXXXEKAAYAGPLRVPSRRRWVSAHPDAPKKASNAYLEFCRARRPALQAHYPHVASAALSKMLAEAWARLSAEERAPFVACALVDKARYRSDM 597
GD E ++++R +K P AP + +S Y+LFS+ +R+E+K P+ K D+M IA W + + W+ A E A Y GPLRVP++R HP+APK+AS+A+L + + RP +++ + + + +SK L EAW + + ++APFV LVD+ARY+ +M
Sbjct: 13 GDIRAEIPTVTKKKRRLQKKAPGAPKRGKSPYILFSMDKREEIKSTMAPNAKVTDVMRAIADAWSKMSEDEKAPWKTAAESDKQRYEEEMATYDGPLRVPNKR--AKKHPNAPKRASSAFLFYSQVMRPRIKSEHQEMKNTEISKQLGEAWGKATKAQKAPFVEKELVDRARYKREM 187
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: A0A8K1CAL6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAL6_PYTOL) HSP 1 Score: 109 bits (273), Expect = 2.490e-24 Identity = 63/170 (37.06%), Postives = 99/170 (58.24%), Query Frame = 1
Query: 91 EGKKRRRKRDTRKHPAAPVQCRSAYVLFSIHRRQELKEQR-PDVKTRDLMGIIAQEWRALERGARERWQARAXXXXXXXXXEKAAYAGPLRVPSRRRWVSAHPDAPKKASNAYLEFCRARRPALQAHYPHVASAALSKMLAEAWARLSAEERAPFVACALVDKARYRSDM 597
EGKKR KR +K P AP + +S Y+LFS+ +R+ +K D K D+M IA W + ++ W+ A E A+Y GPLRVP++R HP+APK+AS+A+L + + RP ++A +P + + +SK L EAW + + ++APF+ D+ RY+ +M
Sbjct: 21 EGKKR--KRLQKKAPGAPKRGKSPYILFSMDKREAIKATLGADAKVTDIMRAIANAWAKMSDDDKQPWKLAAEQDKQRYEEEMASYDGPLRVPNKR--AKKHPEAPKRASSAFLFYSQVMRPRIKADHPDMKNTEISKQLGEAWGKATEAQKAPFIEKEKEDRDRYKREM 186
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: A0A1V9ZRB9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZRB9_9STRA) HSP 1 Score: 114 bits (284), Expect = 3.020e-24 Identity = 63/173 (36.42%), Postives = 102/173 (58.96%), Query Frame = 1
Query: 82 GEAEGKKRRRKRDTRKHPAAPVQCRSAYVLFSIHRRQELKEQRP-DVKTRDLMGIIAQEWRALERGARERWQARAXXXXXXXXXEKAAYAGPLRVPSRRRWVSAHPDAPKKASNAYLEFCRARRPALQAHYPHVASAALSKMLAEAWARLSAEERAPFVACALVDKARYRSDM 597
GE ++++R +K P AP + +S Y+LFS+ +R+E+K P + K D+M IA+ W + + W+ A E A Y GPLRVP++R HP+APK+AS+A+L + + RP ++A +P + + +SK L EAWA+ + ++APFV D+ARY+ +M
Sbjct: 12 GEIPTVNKKKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIAEAWSKMSEDEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKR--AKKHPNAPKRASSAFLFYSQVMRPRIKAEHPDMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREM 182
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: A0A067C9M6_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C9M6_SAPPC) HSP 1 Score: 109 bits (272), Expect = 3.540e-24 Identity = 60/166 (36.14%), Postives = 98/166 (59.04%), Query Frame = 1
Query: 103 RRRKRDTRKHPAAPVQCRSAYVLFSIHRRQELKEQRP-DVKTRDLMGIIAQEWRALERGARERWQARAXXXXXXXXXEKAAYAGPLRVPSRRRWVSAHPDAPKKASNAYLEFCRARRPALQAHYPHVASAALSKMLAEAWARLSAEERAPFVACALVDKARYRSDM 597
++++R +K P AP + +S Y+LFS+ +R+E+K P + K D+M IA W + + W+ A E A Y GPLRVP++R HP+APK+AS+A+L + + RP ++A + + + +SK L EAWA+ + ++APFV D+ARY+ +M
Sbjct: 20 KKKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIADAWSKMSEEEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKR--AKKHPNAPKRASSAFLFYSQVMRPRIKAEHADMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREM 183
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: A0A024U6C4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U6C4_9STRA) HSP 1 Score: 108 bits (271), Expect = 5.140e-24 Identity = 58/166 (34.94%), Postives = 97/166 (58.43%), Query Frame = 1
Query: 103 RRRKRDTRKHPAAPVQCRSAYVLFSIHRRQELKE-QRPDVKTRDLMGIIAQEWRALERGARERWQARAXXXXXXXXXEKAAYAGPLRVPSRRRWVSAHPDAPKKASNAYLEFCRARRPALQAHYPHVASAALSKMLAEAWARLSAEERAPFVACALVDKARYRSDM 597
++++R +K P AP + +S Y+LFS+ +R+E+K P+ K D+M IA W + + W+ A E A Y GPLRVP++R HP+APK+AS+A+L + + RP +++ + + + +SK L EAW + + ++APFV D+ARY+ +M
Sbjct: 24 KKKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMAPNAKVTDVMRAIADAWSKMSEDEKAPWKTAAESDKQRYEEEMATYDGPLRVPNKR--AKKHPNAPKRASSAFLFYSQVMRPRIKSEHQEMKNTEISKQLGEAWGKATKAQKAPFVEKEKEDRARYKREM 187
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: A0A835Z997_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z997_9STRA) HSP 1 Score: 2729 bits (7073), Expect = 0.000e+0 Identity = 1599/1599 (100.00%), Postives = 1599/1599 (100.00%), Query Frame = 1
Query: 1 MRLTVPGSCLLVVLVQLSALQAEGKCPNWCSQHGICTGPEETDHCICEIGYVGDDCGTRLCPKGDDPTTTDQVPRTIQMRTGATRGTLAGEFNFLFNGESVTFDATAALVDGTTCSKLVTSLPNVASASCERGPINEWGGATYTISFDAWPTQPFENNLYNHDGNPSLQQFACNMTAIYDSAWAPWCELDDPLPDAPVKEYAECSNHGTCDRALGRCACALGFKGAACDDMKDADDVAVHIADGPFFSASVLKLRASREPSREFNLLQAIAGTATALTLTGTGDLSVSGDFESADAAVSSLAVNCDDAEGVAIDVNVTANAFTGAVVSATVASPAPGSLLLDLSAEQPDDAPVGLRVAADGAGAEFAGPGGVAITHGGGLTVAGAAAIEGDVXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAQRGAXXXXSATHGAFAGTVLSLDLAAAPGAAGADAALLRATCGGEECLHIGAGGAVTVRRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXIVVASGTLRLPSDEGMTVDGGGISVSSRGANAAALTAAATARGFAGAVVRVEAAHGGGGGSGIGGSAFRLLEGAVGGEVVLEVGGDGAVSAAGDLXXXXXXXXXXXXXXXXXXXXARAAVPAGDAIDLAAVAARGGFVSVTDDGAARANRLRLPPAXXXXXXALLLVQNGDAQALAGDAAVPPGHAVLFVFDGERWRDVNVLNAAVTRLEGVTKLTAAEDLDIGERALRAGALLAGGNEEGGIAVYGAGGLLTSANGLEYDGQTETVTVPRLKVGEMASAVDFRGFGARNVALANVTLDELAFLKVGRVMLSGAARVAAADAVRVLGVDARGEVVPIAQEALSLGAAGGGVVRAQELHVGELRARTLGAAVDCAGNALRGAVLEDVAGVTGLRELALGGGLTLTALAGSEGAILQVDADGRVSAAAGASYADGALHASMLRIAPDGEIDMGGGGALRGAALRGGTTLEGELTGGTLRPDALEAARASLGATTMTGALDLGGMPLLNVRAEDLAGGDMREARELTVTGDLRLAGRDAARGRLLTLGQDGAIVPAQAERLAVECDSLQAGRAAVSTLAATGTVSALALEAESVTATGAVRAARVVTERLQLDGDADGGGHKLSNVALERVSSLTGLRSLTVDGDLAVADFRGAEREGSLLVAGDDGRLALAGAALRWRDGALAVPRLSAHSVAGDVDMGGHALRGAHIDLAGGAGGGGGISGLRDLRVGGALGXXXXXXXXXXXXXXXXXXXXXPYMDSSDARLKANVRALGAEGALAALRRLRAVTYEWDEGAAGAGARWGEGRAPPKGEQIGMLAQEVEAVLPLLVAEGSDGYKSVAYARLTPVLVEGVKLLAAQNDALQDRVRQVEERLARLEAALLGHAHHKANQRRRGRAQYCRKLAKLIRGQIATPAPRGSVVLAHYTTVKQFGLRNTLVKELSTATTAFDMLAAILSVCGMPADAVQQLLMYVEVAELNLQGTLEYADALDAVHYIAYEPLGSSRDTATAPSNAGQACEDAWCSECCDIDGGGGSDAGVTADQQEVDIVNAMAAAXXXCAEVDVDPQAPVLDAAGRVREAARRWEARSPVAIG 4797
MRLTVPGSCLLVVLVQLSALQAEGKCPNWCSQHGICTGPEETDHCICEIGYVGDDCGTRLCPKGDDPTTTDQVPRTIQMRTGATRGTLAGEFNFLFNGESVTFDATAALVDGTTCSKLVTSLPNVASASCERGPINEWGGATYTISFDAWPTQPFENNLYNHDGNPSLQQFACNMTAIYDSAWAPWCELDDPLPDAPVKEYAECSNHGTCDRALGRCACALGFKGAACDDMKDADDVAVHIADGPFFSASVLKLRASREPSREFNLLQAIAGTATALTLTGTGDLSVSGDFESADAAVSSLAVNCDDAEGVAIDVNVTANAFTGAVVSATVASPAPGSLLLDLSAEQPDDAPVGLRVAADGAGAEFAGPGGVAITHGGGLTVAGAAAIEGDVXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAQRGAXXXXSATHGAFAGTVLSLDLAAAPGAAGADAALLRATCGGEECLHIGAGGAVTVRRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXIVVASGTLRLPSDEGMTVDGGGISVSSRGANAAALTAAATARGFAGAVVRVEAAHGGGGGSGIGGSAFRLLEGAVGGEVVLEVGGDGAVSAAGDLXXXXXXXXXXXXXXXXXXXXARAAVPAGDAIDLAAVAARGGFVSVTDDGAARANRLRLPPAXXXXXXALLLVQNGDAQALAGDAAVPPGHAVLFVFDGERWRDVNVLNAAVTRLEGVTKLTAAEDLDIGERALRAGALLAGGNEEGGIAVYGAGGLLTSANGLEYDGQTETVTVPRLKVGEMASAVDFRGFGARNVALANVTLDELAFLKVGRVMLSGAARVAAADAVRVLGVDARGEVVPIAQEALSLGAAGGGVVRAQELHVGELRARTLGAAVDCAGNALRGAVLEDVAGVTGLRELALGGGLTLTALAGSEGAILQVDADGRVSAAAGASYADGALHASMLRIAPDGEIDMGGGGALRGAALRGGTTLEGELTGGTLRPDALEAARASLGATTMTGALDLGGMPLLNVRAEDLAGGDMREARELTVTGDLRLAGRDAARGRLLTLGQDGAIVPAQAERLAVECDSLQAGRAAVSTLAATGTVSALALEAESVTATGAVRAARVVTERLQLDGDADGGGHKLSNVALERVSSLTGLRSLTVDGDLAVADFRGAEREGSLLVAGDDGRLALAGAALRWRDGALAVPRLSAHSVAGDVDMGGHALRGAHIDLAGGAGGGGGISGLRDLRVGGALGXXXXXXXXXXXXXXXXXXXXXPYMDSSDARLKANVRALGAEGALAALRRLRAVTYEWDEGAAGAGARWGEGRAPPKGEQIGMLAQEVEAVLPLLVAEGSDGYKSVAYARLTPVLVEGVKLLAAQNDALQDRVRQVEERLARLEAALLGHAHHKANQRRRGRAQYCRKLAKLIRGQIATPAPRGSVVLAHYTTVKQFGLRNTLVKELSTATTAFDMLAAILSVCGMPADAVQQLLMYVEVAELNLQGTLEYADALDAVHYIAYEPLGSSRDTATAPSNAGQACEDAWCSECCDIDGGGGSDAGVTADQQEVDIVNAMAAAXXXCAEVDVDPQAPVLDAAGRVREAARRWEARSPVAIG
Sbjct: 1 MRLTVPGSCLLVVLVQLSALQAEGKCPNWCSQHGICTGPEETDHCICEIGYVGDDCGTRLCPKGDDPTTTDQVPRTIQMRTGATRGTLAGEFNFLFNGESVTFDATAALVDGTTCSKLVTSLPNVASASCERGPINEWGGATYTISFDAWPTQPFENNLYNHDGNPSLQQFACNMTAIYDSAWAPWCELDDPLPDAPVKEYAECSNHGTCDRALGRCACALGFKGAACDDMKDADDVAVHIADGPFFSASVLKLRASREPSREFNLLQAIAGTATALTLTGTGDLSVSGDFESADAAVSSLAVNCDDAEGVAIDVNVTANAFTGAVVSATVASPAPGSLLLDLSAEQPDDAPVGLRVAADGAGAEFAGPGGVAITHGGGLTVAGAAAIEGDVXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAQRGAXXXXSATHGAFAGTVLSLDLAAAPGAAGADAALLRATCGGEECLHIGAGGAVTVRRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXIVVASGTLRLPSDEGMTVDGGGISVSSRGANAAALTAAATARGFAGAVVRVEAAHGGGGGSGIGGSAFRLLEGAVGGEVVLEVGGDGAVSAAGDLXXXXXXXXXXXXXXXXXXXXARAAVPAGDAIDLAAVAARGGFVSVTDDGAARANRLRLPPAXXXXXXALLLVQNGDAQALAGDAAVPPGHAVLFVFDGERWRDVNVLNAAVTRLEGVTKLTAAEDLDIGERALRAGALLAGGNEEGGIAVYGAGGLLTSANGLEYDGQTETVTVPRLKVGEMASAVDFRGFGARNVALANVTLDELAFLKVGRVMLSGAARVAAADAVRVLGVDARGEVVPIAQEALSLGAAGGGVVRAQELHVGELRARTLGAAVDCAGNALRGAVLEDVAGVTGLRELALGGGLTLTALAGSEGAILQVDADGRVSAAAGASYADGALHASMLRIAPDGEIDMGGGGALRGAALRGGTTLEGELTGGTLRPDALEAARASLGATTMTGALDLGGMPLLNVRAEDLAGGDMREARELTVTGDLRLAGRDAARGRLLTLGQDGAIVPAQAERLAVECDSLQAGRAAVSTLAATGTVSALALEAESVTATGAVRAARVVTERLQLDGDADGGGHKLSNVALERVSSLTGLRSLTVDGDLAVADFRGAEREGSLLVAGDDGRLALAGAALRWRDGALAVPRLSAHSVAGDVDMGGHALRGAHIDLAGGAGGGGGISGLRDLRVGGALGXXXXXXXXXXXXXXXXXXXXXPYMDSSDARLKANVRALGAEGALAALRRLRAVTYEWDEGAAGAGARWGEGRAPPKGEQIGMLAQEVEAVLPLLVAEGSDGYKSVAYARLTPVLVEGVKLLAAQNDALQDRVRQVEERLARLEAALLGHAHHKANQRRRGRAQYCRKLAKLIRGQIATPAPRGSVVLAHYTTVKQFGLRNTLVKELSTATTAFDMLAAILSVCGMPADAVQQLLMYVEVAELNLQGTLEYADALDAVHYIAYEPLGSSRDTATAPSNAGQACEDAWCSECCDIDGGGGSDAGVTADQQEVDIVNAMAAAXXXCAEVDVDPQAPVLDAAGRVREAARRWEARSPVAIG 1599
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: D7G3M7_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3M7_ECTSI) HSP 1 Score: 300 bits (769), Expect = 3.520e-85 Identity = 145/279 (51.97%), Postives = 187/279 (67.03%), Query Frame = 1
Query: 19 GSCLLVVLVQLSALQAEGKCPNWCSQHGICTGPEETDHCICEIGYVGDDCGTRLCPKGDDPTTTDQVPRTIQMRTGATRGTLAGEFNFLFNGESVTFDATAALVDGTTCSKLVTSLPNVASASCERGPINEWGGATYTISFDAWPTQPFENNLYNHDGNPSLQQFACNMTAIYDSAWAPWCELDDPLPDAPVKEYAECSNHGTCDRALGRCACALGFKGAACDDMKDADDVAVHIADGPFFSASVLKLRASREPSREFNLLQAIAGTATALTLTGTGDL 855
G L ++LV + A KCPNWCSQHGICTGP + CICE+G+ GDDCGTRLCPKGDDP TTDQ R + +RT A G ++GE FNGES T +A A C+ + LPN+ C+RG ++E+GG Y IS +PT P+ENNLY H GNP+L+ F+CN+++ DSA + CEL D + + VKEY ECS HG C R GRC C GF G ACDD+ D+DD V +A+GPFF+ + LKLRA+R S +++L++AIAG +TLTG GDL
Sbjct: 24 GYGLFLILVFVPVYLA--KCPNWCSQHGICTGPGDDAFCICEMGFQGDDCGTRLCPKGDDPLTTDQADRVLLLRTTAEEGPISGELTVTFNGESTTLNADARQTGDLECAAALQMLPNIDRVGCQRGAVSEFGGTDYVISLLRFPTTPWENNLYGHSGNPALEAFSCNISSEADSAASSSCELIDMVTEN-VKEYMECSGHGRCVRETGRCECTFGFGGEACDDISDSDDAQVILAEGPFFTGATLKLRANRGLSTDYDLVRAIAGRHDVMTLTGAGDL 299
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: A0A7S2WXE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WXE7_9STRA) HSP 1 Score: 200 bits (508), Expect = 9.220e-55 Identity = 92/190 (48.42%), Postives = 123/190 (64.74%), Query Frame = 1
Query: 55 ALQAEGKCPNWCSQHGICTGPEETDHCICEIGYVGDDCGTRLCPKGDDPTTTDQVPRTIQMRTGATRGTLAGEFNFLFNGESVTFDATAALVDGTTCSKLVTSLPNVASASCERGPINEWGGATYTISFDAWPTQPFENNLYNHDGNPSLQQFACNMTAIYDSAWAPWCELDDPLPDAPVKEYAECSNHG 624
A AE KCPN CSQHG+C+GP +CICE G+ GDDC R+CPKGDD T Q R +++ TGA +G L G F F F G SV +A A + G C + + SLP++ SCERGP+NE GGA YTI+F ++P P +NNLY HDGNP L F C+ + ++ + P CE+ D + + ++EY +C NHG
Sbjct: 20 ASSAEAKCPNDCSQHGLCSGPGADAYCICEGGFTGDDCSIRICPKGDDALTMGQNDRVVRLHTGAMQGFLEGHFTFSFLGYSVELEANANTLSGERCKQALQSLPSIHQVSCERGPVNEQGGADYTITFLSFPALPADNNLYFHDGNPGLDLFECDTSGVFGGDF-PVCEVSD-VEASNIREYVQCGNHG 207
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: A0A482V260_9ARCH (EGF-like domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V260_9ARCH) HSP 1 Score: 178 bits (452), Expect = 1.190e-46 Identity = 81/240 (33.75%), Postives = 136/240 (56.67%), Query Frame = 1
Query: 34 VVLVQLSALQAEGKCPNWCSQHGICTGPEETDHCICEIGYVGDDCGTRLCPKGDDPTTTDQVP-----RTIQMRTGATRGTLAGEFNFLFNGESVTFDATAALVDGTTCSKLVTSLPNVASASCERGPINE-WGGATYTISFDAWPTQPFENNLYNHDGNPSLQQFACNMTAIYD-SAWAPWCELDDPLPDAPVKEYAECSNHGTCDRALGRCACALGFKGAACDDMKDADDVAVHIADG 732
++L+ +A +CPNWC+ G+C ++ +C C++GY G+DC ++CP DP + + R +++ T G ++G F F G +V +A A +D C+ L++ L +V+ +CER ++ Y ++ +P +P NN+ +H+GNP ++ FACN + + A +CE+ D LP P+ Y EC+NHGTC+R G CAC GFKG AC+D++D D+ + +G
Sbjct: 8 IILLFTWLSKAWSRCPNWCNNKGLCVTNDDGGYCYCDMGYTGEDCSLKVCPSAFDPVSPILLAENPNRRQVRLETSVLSGKMSGAIFFTFGGATVPLNADATQLDSNQCTYLLSGLKSVSEVTCERELLDSNTHTGRYLVTLRGFPERPHTNNIISHNGNPGMELFACNSSQVSAIEAQGAYCEILDVLPSLPLPVYGECANHGTCNRLTGVCACEYGFKGLACNDIRDDQDIDFVVHEG 247
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: A0A7R9YF46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YF46_9STRA) HSP 1 Score: 167 bits (424), Expect = 5.240e-42 Identity = 89/228 (39.04%), Postives = 119/228 (52.19%), Query Frame = 1
Query: 76 CPNWCSQHGICT------------------GP-------EETDHCICEIGYVGDDCGTRLCPKGDDPTTTDQVPRTIQMRTGATRGTLAGEFNFLFNGESVTFDATAALVDGTTCSKLVTSLPNVASASCERGPINEWGGATYTISFDAWPTQPFENNLYNHDGNPSLQQFACNMTAIYDSAWAPWCELDDPLPDAPVKEYAECSNHGTCDRALGRCACALGFKGAAC 684
CP+ CS HG C GP + T C+C+IG+ G DC +RLCPKGDDP TT Q R++ + TGA + G F GES T A A VD C SLPN+ S C RG ++ GA+Y I +P P +NNL+ HDGNPSL F+C+++ + +A C D + ++EY+ CS G CD ++G+C C GF GAAC
Sbjct: 78 CPSSCSGHGTCMTTAQASILYGIDDDFDGDGPLYSNWDADITTFCVCDIGFWGGDCSSRLCPKGDDPLTTSQSARSVFLTTGAASA-IGGSVTITFQGESFTMSADANSVDSQACRTFFESLPNIQSVQCSRGAVDGNNGASYEIELSEYPLNPHQNNLFYHDGNPSLSSFSCDVSQMTGTAVT--CLFTDGTT-SNLQEYSLCSGRGMCDPSVGQCTCFNGFLGAAC 301
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: A0A7S3JX11_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JX11_9STRA) HSP 1 Score: 164 bits (415), Expect = 4.780e-37 Identity = 96/269 (35.69%), Postives = 137/269 (50.93%), Query Frame = 1
Query: 76 CPNWCSQHGICTGPEETDHCICEIGYVGDDCGTRLCPKGDDPTTTDQVPRTIQMRTGATRGTLA-----GEFNFLFNGESVTFDATAALVDGTTCSKLVTSLPNVASASCERGPINEWGGATYTISFDAWPTQPFENNLYNHDGNPSLQQFACNMTAIYDSAWAPWCELDDPLPDAPVKEYAECSNHGTCDRALGRCACALGFKGAACDDMKDADDVAVHIADGPFFSASVLKLRASREPSREFNLLQAIAGTATALTLTGTGDLSVSG 867
C N C+ +G C G + HC C+ + G C CP+GDDP T DQ R+ +++ + R T A G F G A++ ++ CS + L ++ A C R + +G Y I W P + H GNPSL F C+ TA C L D L + VKE+ ECSNHG C + G+C C G+ G AC + D+DDVA+H A+GPFFS ++L+LRA+R P F+++ A + + G GD+ VSG
Sbjct: 2 CLNSCNLNGKCVGEGSSAHCSCDPEFTGVSCEIAHCPRGDDPLTRDQKERSFRLQIVSDRATTANTRVNGTVKIRFLGSQRQMPASSNELNNAICSHTWSQLLGISRAQCNRIEADAFGNGVYHIRIIEWTQTPVDAQE-PHFGNPSLSAFECDSTAAAPEGLK--CILSD-LNNEDVKEHVECSNHGFCG-SDGQCQCHSGWYGKACSENLDSDDVALHAAEGPFFSGTLLRLRATRPPDTSFSVIAASSAGIPTFVVRGNGDMQVSG 265
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: A0A662XZN1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZN1_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.520e-35 Identity = 266/829 (32.09%), Postives = 367/829 (44.27%), Query Frame = 1
Query: 88 CSQHGICTGPEETDH-CICEIGYVGDDCGTRLCPKGDDPTTTDQVPRTIQMRTGATRGTLAGEFNFLFNGESVTFDATAALVDGTTCSK-LVTSLPNVASASCERGPINEWGGATYTISFDAWPTQPFENNLYNHDGNPSLQQFACNMTAIYDSAWAPWCELD-DPLPDAPVKEYAECSNHGTCDRALGRCACALGFKGAACDDMKDADDVAVHIADGPFFSASVLKLRASREPSREFNLLQAIAGTATALTLTGTGD--------------LSVSGDFESADAAVSSLAVNCDDAE----GVAIDVNVTANAFT-GAVV----SATVASPAPGSLLLDLSAEQPDDAPVGLRVAADGAGAEFAGPGGVAITHGGGLTVAGAAAIEGDVXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAQRGAXXXXSATHGAFAGTVLSLDLAAAPGAAGADAAL-LRATCGGEECLHIGAGGAVTVRRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXIVVASGTLRLPSDEGMTVDGGGISVSSRGANAAALTAAATARGFAGAVVRVEAAHGGGGGSGIGGSAFRLLEGAVGGEV---------VLEVGGDGAVSAAGDLXXXXXXXXXXXXXXXXXXXXARAAVPAGDAIDLAAVAARGGFVSVTDDGAARANRLRLPPAXXXXXXALLLVQNGDAQALAGDAAVPPGHAVLFVFDGERWRDVNVLNAAVTRLEGVTKLTAAEDLDIGERALRAGALLAGGNEEGGIAVYGAGGLLTSANGLEYDGQTETVTVPRLKVGEMASAVDF-----RGFGARNVALANVTLDELAFLKV 2451
CS HG C + +H C C+ GY DC C VP ++ GT V GTT + L + P A +CER + AT+ I+ A+P P NNLY+H+GNPS+ F C+ T + S+ + + + D+ VK Y ECSNHG C+ G CAC GF G C + ++ DV + A GPFF + L+L A+R+ S +F+L+ A G T+ G GD L +SG A +L + A + + + T + T GA + T A+ + S+L D PV LRV+ GAG+ GG+ I XXXXXXXXXXXXXXXXXXXXXXXXXXX TA A G VL L + GA+ + A + R + G+ + TV GG XXXXXXXXXXXXXXXXXXXXXXXX L + +G T++ GG++V + N AL A+T FAGA++ + A FRLLE E V V G + GDL ++V A L + + +V VT DGAA N R+ LL++QN D Q L+GD V G A +FVFDG WR + + L GV AA DL++GE L ++ GG G +AVYG GG+L L +D + T+ +++ + ++D RG ++NV + + ++V
Sbjct: 798 CSLHGACVINRQGEHVCNCQWGYTESDCSRSACCS-----LVLSVPLSLFDCQPRRPGTS---------------------VPGTTSLRSLAWTDPRFALQTCERTFFQQPATATFEITLHAFPMFPIMNNLYHHNGNPSVSDFWCDATNVQLSSPSGGVRCSFESITDSDVKPYEECSNHGDCNAVTGVCACHDGFYGDHCGNNQNDGDVLMAPARGPFFRGNALRLSATRDLSADFHLVHADVGGRAVFTMDGRGDTTWHHGSLQLREGGLVMSGGSTFQLQAGGALEMQSGRARLQDTPLHLQLRATPESPTDGAALLHIERLTAAATSELSMLPDFLRISQPKGPV-LRVS--GAGSTVIHTGGLEILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTALEAAT-----------GPVLLLQRDDSDGASSSGALIEARGSKSGDSTVFEVHDSGATVVHGGGVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTTRDGFTIEDGGLAVQTEDTNGKALRVASTNANFAGALLSFDLAD-----QHREAPPFRLLEALKPSESGDDRTEPTSVFSVDSRGNLETRGDLTTTHGGRVVANGALISQAQAVFSSVQLRAASTLV-IPSTNSYVQVTSDGAAELNAARIDREHAHAGQ-LLVIQNDDEQPLSGDLNVASGAAAIFVFDGGVWRPLTAAAFDTSSLTGVKTFEAANDLNLGEITLSVQSVQVGGQRAGFVAVYGKGGVLEQHEALRFDAASGTLKADKVEPQRLRGSIDMTESELRGVDIVGGHISNVNMTGIQMVEV 1579
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: V9FJD3_PHYPR (EGF-like domain-containing protein n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=V9FJD3_PHYPR) HSP 1 Score: 154 bits (388), Expect = 1.890e-34 Identity = 112/343 (32.65%), Postives = 160/343 (46.65%), Query Frame = 1
Query: 73 KCPNWCSQHGICT---------GPEET--------------------DHCICEIGYVGDDCGTRLCPKGDDPTTTDQVPRTIQMRTGATRGT---LAGEFNFLFNGESVTFDATAALVDGT---TCSKLVTSLPNVASASCERGPINE-WGGATYTISFDAWPTQPFENNLYNHDGNPSLQQFACNMTAIYDSAWAPWCELDDPLPDAPVKEYAECSNHGTCDRALGRCACALGFKGAACD------DMKDADDVAVHIADGPFFSASVLKLRASREPSREFNLLQAIAGTATALTLTGTGDLSV-SGDFESADAAVSSLAVNCDDAEGVAIDVNVTANAFTG 972
+CP+ CS HG+C GP+ C+C++GY G DC +C K DDP TT Q RTIQ++ GA T LAG F G+ F A A+ D T C++ S+ V SA+C ++ GATYT++F W ENNL HDGNP L F+C++T + S +P C + D + V E+ CSN G CD G+C C FKG C+ D D +D + G ++ +VL L+ ++ +F ++ + T LT+ G GD + +GDFE + SL + A D+ T FTG
Sbjct: 112 RCPSDCSGHGLCYSSATLALQYGPDSLPSVAGDGVGPVYSNWEKNSMSSCMCDMGYTGPDCSQIMCAKNDDPLTTGQGFRTIQIQVGADATTNLALAGSIRVHFLGDVAVFSA-VAVADATHEQACAQAFQSMRTVLSATCSITSVDPVTAGATYTVTFKEWVHLGGENNLLYHDGNPPLSSFSCDLTKV-TSLNSPTCAVSD-VTATNVVEHVYCSNRGLCDFTTGQCVCYADFKGLDCNQPSNVPDSIDDNDGFIINPMGLTYTGTVLHLKTAKGSQADFYFMKIGSSTLPILTMDGMGDTKLLNGDFE---LSTGSLTITTVAQTSTAADIANTHTTFTG 448
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: W2QJM8_PHYPN (EGF-like domain-containing protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QJM8_PHYPN) HSP 1 Score: 154 bits (388), Expect = 5.350e-34 Identity = 112/343 (32.65%), Postives = 160/343 (46.65%), Query Frame = 1
Query: 73 KCPNWCSQHGICT---------GPEET--------------------DHCICEIGYVGDDCGTRLCPKGDDPTTTDQVPRTIQMRTGATRGT---LAGEFNFLFNGESVTFDATAALVDGT---TCSKLVTSLPNVASASCERGPINE-WGGATYTISFDAWPTQPFENNLYNHDGNPSLQQFACNMTAIYDSAWAPWCELDDPLPDAPVKEYAECSNHGTCDRALGRCACALGFKGAACD------DMKDADDVAVHIADGPFFSASVLKLRASREPSREFNLLQAIAGTATALTLTGTGDLSV-SGDFESADAAVSSLAVNCDDAEGVAIDVNVTANAFTG 972
+CP+ CS HG+C GP+ C+C++GY G DC +C K DDP TT Q RTIQ++ GA T LAG F G+ F A A+ D T C++ S+ V SA+C ++ GATYT++F W ENNL HDGNP L F+C++T + S +P C + D + V E+ CSN G CD G+C C FKG C+ D D +D + G ++ +VL L+ ++ +F ++ + T LT+ G GD + +GDFE + SL + A D+ T FTG
Sbjct: 112 RCPSDCSGHGLCYSSATLALQYGPDSLPSVAGDGVGPVYSNWEKNSMSSCMCDMGYTGPDCSQIMCAKNDDPLTTGQGFRTIQIQVGADATTNLALAGSIRVHFLGDVAVFSA-VAVADATHEQACAQAFQSMRTVLSATCSITSVDPVTAGATYTVTFKEWVHLGGENNLLYHDGNPPLSSFSCDLTKV-TSLNSPTCAVSD-VTATNVVEHVYCSNRGLCDFTTGQCVCYADFKGLDCNQPSNVPDSIDDNDGFIINPMGLTYTGTVLHLKTAKGSQADFYFMKIGSSTLPILTMDGMGDTKLLNGDFE---LSTGSLTITTVAQTSTAADIANTHTTFTG 448
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Match: A0A0W8DZG7_PHYNI (Tenascin-N n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DZG7_PHYNI) HSP 1 Score: 152 bits (383), Expect = 3.990e-33 Identity = 104/311 (33.44%), Postives = 149/311 (47.91%), Query Frame = 1
Query: 73 KCPNWCSQHGICT---------GPEET--------------------DHCICEIGYVGDDCGTRLCPKGDDPTTTDQVPRTIQMRTGATRGT---LAGEFNFLFNGESVTFDATAALVDGT---TCSKLVTSLPNVASASCERGPINE-WGGATYTISFDAWPTQPFENNLYNHDGNPSLQQFACNMTAIYDSAWAPWCELDDPLPDAPVKEYAECSNHGTCDRALGRCACALGFKGAACD------DMKDADDVAVHIADGPFFSASVLKLRASREPSREFNLLQAIAGTATALTLTGTGDLSV-SGDFE 876
+CP+ CS HG+C GP+ C+C++GY G DC +C K DDP TT Q RTIQ++ GA T LAG F G+ F A A+ D T C++ S+ V SA+C ++ GATYT++F W ENNL HDGNP L F+C++T + S +P C + D + V E+ CSN G CD G+C C FKG C+ D D +D + G ++ +VL L+ ++ +F ++ + T LT+ G GD + +GDFE
Sbjct: 103 RCPSDCSGHGLCYSSATLALQYGPDSLPSVAGDGVGPVYSNWEKNSMSSCMCDMGYTGPDCSQIMCAKNDDPLTTGQGFRTIQIQVGADATTNLALAGSIRVHFLGDVAVFSA-VAVADATHEQACAQAFQSMRTVLSATCSITSVDPVTAGATYTVTFKEWVHLGGENNLLYHDGNPPLSSFSCDLTKV-TSLNSPTCAVSD-VTATNVVEHVYCSNRGLCDFTTGQCVCYADFKGLDCNQPSNVPDSIDDNDGFIINPMGLTYTGTVLHLKTAKGSQADFYFMKIGSSTLPILTMDGMGDTKLLNGDFE 410 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348282 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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BLAST of jgi.p|Trimin1|348282 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6356 ID=mRNA_6356|Name=jgi.p|Trimin1|348282|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1203bp|location=Sequence derived from alignment at Contig_22:343643..347984+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGTGCAGACATTCGAGCGCCCTGACATGCTGTCCTACTGGGCAGCGGAback to top protein sequence of jgi.p|Trimin1|348282 >Trimin1|348282|estExt_Genemark1.C_Ctg_220044 ID=Trimin1|348282|estExt_Genemark1.C_Ctg_220044|Name=jgi.p|Trimin1|348282|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=400bp MVQTFERPDMLSYWAAEDDKQPDGDGMGEAEGKKRRRKRDTRKHPAAPVQback to top mRNA from alignment at Contig_22:343643..347984+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6356 ID=mRNA_6356|Name=jgi.p|Trimin1|348282|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4342bp|location=Sequence derived from alignment at Contig_22:343643..347984+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_22:343643..347984+ >mRNA_6356 ID=mRNA_6356|Name=jgi.p|Trimin1|348282|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1200bp|location=Sequence derived from alignment at Contig_22:343643..347984+ (Tribonema minus UTEX_B_3156 )back to top |