mRNA_6347 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|162681
Unique NamemRNA_6347
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: A0A835Z8B8_9STRA (Radical SAM core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B8_9STRA)

HSP 1 Score: 387 bits (993), Expect = 2.410e-135
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1
Query:    1 MLDRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGVSRRRRRCXXXXXXXXXRVRPCTCRSVLPAS 636
            MLDRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGVSRRRRRCXXXXXXXXXRVRPCTCRSVLPAS
Sbjct:    1 MLDRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGVSRRRRRCXXXXXXXXXRVRPCTCRSVLPAS 212          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: UPI001E5DA08F (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH n=1 Tax=Thermorudis peleae TaxID=1382356 RepID=UPI001E5DA08F)

HSP 1 Score: 207 bits (527), Expect = 1.750e-61
Identity = 112/179 (62.57%), Postives = 134/179 (74.86%), Query Frame = 1
Query:   10 RTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 546
            R L Q  ++VA ILDRAL+  G+ ITV EG +L  A G +L A+   ADELRRR  VGDVVTY +NRNINFTN C+KRCGFCAFSR   + EAY LPIDE+VRRA+EA E  GATEVC+QAGLPP MRG  Y E+  A+K ALP +H+H FSPEEV YGA R+ CSV  +++ L+DAGV
Sbjct:   20 RLLDQLDRTVARILDRALS--GEDITVEEGERLFAAEGLELNALILVADELRRRR-VGDVVTYVINRNINFTNVCIKRCGFCAFSRGHREEEAYFLPIDEVVRRAQEAWEL-GATEVCIQAGLPPKMRGDYYIELTKAIKRALPDIHIHGFSPEEVWYGATRARCSVADYLQALKDAGV 194          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: A0A2H5Z5S6_9BACT (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase n=3 Tax=Bacteria TaxID=2 RepID=A0A2H5Z5S6_9BACT)

HSP 1 Score: 206 bits (524), Expect = 3.960e-61
Identity = 112/181 (61.88%), Postives = 131/181 (72.38%), Query Frame = 1
Query:    4 LDRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 546
            LDR L  A+  VA ILDR LA  G  +TV EG +L    G DL  V   ADELRRR+ VGDVVTY VNRNINFTN C+KRCGFCAFSR   + + Y LP++EIVRRAREA E  GATEVC+QAGLPP M   LY  I  A+KA LP +H+H FSPEEVVYGA R+ CS+  +++RLR+AGV
Sbjct:   11 LDRLLALASPDVARILDRVLA--GHEVTVDEGERLFETHGRDLFLVTLVADELRRRA-VGDVVTYVVNRNINFTNVCIKRCGFCAFSRGHREEQGYFLPLEEIVRRAREAWEL-GATEVCIQAGLPPKMDPDLYPTICRAIKAELPGIHIHGFSPEEVVYGALRARCSIAEYLQRLREAGV 187          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: A0A7C5RQS8_9CHLR (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C5RQS8_9CHLR)

HSP 1 Score: 200 bits (509), Expect = 5.880e-59
Identity = 108/180 (60.00%), Postives = 132/180 (73.33%), Query Frame = 1
Query:    7 DRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 546
            DR L    + VA IL++AL+  G+ I V EG  L R +G +L AV   ADELRRR  VGDVVTY +NRNINFTN C+K CGFCAFSR     EAY LPIDE+VRRA+EA E  GATEVC+QAGLPP + G  Y E+  A+K ALP +H+HAFSPEEVVYGA R+GCS+  +++ L++AGV
Sbjct:   19 DRILALVDRQVAGILEKALS--GEEIDVQEGEALFRTQGLELLAVILVADELRRRR-VGDVVTYVINRNINFTNVCIKHCGFCAFSRDHRVEEAYFLPIDEVVRRAQEAWEL-GATEVCIQAGLPPKLDGYYYVELTKAIKRALPDIHIHAFSPEEVVYGAIRAGCSIEDYLKALKEAGV 194          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: A0A536LZ19_9CHLR (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase n=3 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536LZ19_9CHLR)

HSP 1 Score: 198 bits (503), Expect = 5.170e-58
Identity = 106/181 (58.56%), Postives = 134/181 (74.03%), Query Frame = 1
Query:    7 DRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGG-DLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 546
            DR L +    VA +LDRALA  G+ I+V EG  LL A+G  ++ A+  AAD+LRRR+ VGDVVTY +NRNINFTN C+K C FCAFSR+  + EAY LP++EIVRRAREA E  GATEVC+QAGLPP M+G  Y E+  A+K  LP +H+H FSPEEV+YGA RS C++  ++  L+DAGV
Sbjct:   20 DRLLGEVDSGVAHVLDRALA--GEDISVEEGTSLLEAQGSANMNAIVLAADDLRRRT-VGDVVTYIINRNINFTNVCIKHCTFCAFSRSHREEEAYYLPVEEIVRRAREAWEL-GATEVCIQAGLPPKMKGDYYLELTRAIKKELPEIHIHGFSPEEVLYGAIRSRCTIREYLVGLKDAGV 196          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: A0A523ZA91_9CHLR (CofH family radical SAM protein (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A523ZA91_9CHLR)

HSP 1 Score: 192 bits (487), Expect = 1.230e-57
Identity = 102/180 (56.67%), Postives = 127/180 (70.56%), Query Frame = 1
Query:    7 DRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 546
            DR L    + VA +LD+AL   G+ I+V E   L  ARG +L A+  AADELRRRS VGDVVTY +NRNINFTN C+K CGFCAFSR   + EAY LPI+E+VRRA EA +  GATEVC+QAGLPP M G  Y ++  A+K  LP +H+H FSPEEV+YG+ R+ CS+   +  L+ AGV
Sbjct:   17 DRLLGSIDREVAGVLDKALQ--GEDISVEEATTLFEARGPELNAIVLAADELRRRS-VGDVVTYVINRNINFTNVCIKHCGFCAFSRDHREEEAYFLPIEEVVRRASEAWDL-GATEVCIQAGLPPKMDGHYYVDLTRAIKKELPDIHIHGFSPEEVLYGSIRARCSIEDHLRALKQAGV 192          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: I4EHB0_9CHLR (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase n=1 Tax=Nitrolancea hollandica Lb TaxID=1129897 RepID=I4EHB0_9CHLR)

HSP 1 Score: 196 bits (499), Expect = 1.540e-57
Identity = 107/181 (59.12%), Postives = 129/181 (71.27%), Query Frame = 1
Query:    4 LDRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 546
            LD  L+    + A ILDRAL  G   ITV EG +L    G +L  + A ADELRRRS VGDVVTY VNRNINFTN C+KRCGFCAFSR   + + Y LP++E++RRAREA E  GATEVC+QAGLPP M G LY  I  A+KA +P +H+H FSPEEV+YGA RS C++  F+ RL+ AGV
Sbjct:   12 LDSLLSCCDPATALILDRAL--GDYEITVDEGERLFSVHGVELLLLTAVADELRRRS-VGDVVTYIVNRNINFTNVCIKRCGFCAFSRGHREEQGYFLPLEEVLRRAREAWEV-GATEVCIQAGLPPKMDGDLYPSICRAIKAEIPDLHIHGFSPEEVLYGAIRSRCTIEEFIARLKAAGV 188          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: A0A3N0A5L1_9ARCH (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase n=3 Tax=unclassified Nitrosopumilus TaxID=2619919 RepID=A0A3N0A5L1_9ARCH)

HSP 1 Score: 196 bits (497), Expect = 1.940e-57
Identity = 104/180 (57.78%), Postives = 131/180 (72.78%), Query Frame = 1
Query:    7 DRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 546
            +  L  A   ++AIL+RAL+   + I+V EGA L  ARG D   V   ADELRRR  VGD VTY VNRNINFTN C+K+CGFCAFSR     E Y+LP +EIVRRA+EA  + GATEVC+QAGLPP M+G+LYEEI  ++KA +P +H+H FSPEE++YGA RSG +   F+ R++DAGV
Sbjct:    4 EALLRDADPEISAILERALSE--KEISVIEGAALYGARGLDYHLVGMVADELRRRR-VGDTVTYVVNRNINFTNVCIKQCGFCAFSRDFRQEEGYMLPTEEIVRRAKEA-RSLGATEVCIQAGLPPDMKGSLYEEICRSIKAEIPEIHIHGFSPEEILYGAARSGITPEEFLGRMKDAGV 179          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: A0A6L7TK58_9CHLR (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7TK58_9CHLR)

HSP 1 Score: 196 bits (497), Expect = 3.200e-57
Identity = 103/170 (60.59%), Postives = 128/170 (75.29%), Query Frame = 1
Query:   37 VAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 546
            VAA+LDRALA  G+ IT  EGA L    G +  A+  AADELRRR+ VGD+ TY VNRN+NFTN C+KRCGFCAFSR   + E Y LPI+EIVRRA+EA + YGATEVC+QAGLPP M G LY  + +A+K ALP +H+H FSPEEV+YG+ RS C++  ++E L+ AGV
Sbjct:   24 VAAVLDRALA--GEDITAEEGAVLFATTGPEYNAMVLAADELRRRT-VGDIATYVVNRNVNFTNVCIKRCGFCAFSRDFREEEGYFLPIEEIVRRAQEAWD-YGATEVCIQAGLPPQMEGDLYIRLCSAIKEALPDMHIHGFSPEEVLYGSIRSRCTIREYLEGLKAAGV 189          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: B9L535_THERP (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) TaxID=309801 RepID=B9L535_THERP)

HSP 1 Score: 195 bits (496), Expect = 5.170e-57
Identity = 108/182 (59.34%), Postives = 130/182 (71.43%), Query Frame = 1
Query:    1 MLDRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 546
            +L+R L  A+  VA ILDRAL+  G  +T+ EG +L    G DL  V   ADELRRR+ VGDVVTY VNRNINFTN C+KRCGFCAFSR   + + Y LP++EIVRRAREA E  GATEVC+QAGLPP M   LY  I  A+KA LP +H+H FSPEEVVYGA R+  S+  ++ RL+ AGV
Sbjct:   10 LLERQLGLASPEVARILDRALS--GHELTIEEGERLFATHGRDLFLVTLVADELRRRA-VGDVVTYVVNRNINFTNVCIKRCGFCAFSRGHREEQGYFLPLEEIVRRAREAWEL-GATEVCIQAGLPPKMDPDLYPTICRAIKAELPEIHIHGFSPEEVVYGALRARTSIEEYLLRLKAAGV 187          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8B8_9STRA2.410e-135100.00Radical SAM core domain-containing protein n=1 Tax... [more]
UPI001E5DA08F1.750e-6162.575-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]
A0A2H5Z5S6_9BACT3.960e-6161.885-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]
A0A7C5RQS8_9CHLR5.880e-5960.005-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]
A0A536LZ19_9CHLR5.170e-5858.565-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]
A0A523ZA91_9CHLR1.230e-5756.67CofH family radical SAM protein (Fragment) n=1 Tax... [more]
I4EHB0_9CHLR1.540e-5759.125-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]
A0A3N0A5L1_9ARCH1.940e-5757.785-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]
A0A6L7TK58_9CHLR3.200e-5760.595-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]
B9L535_THERP5.170e-5759.345-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:292254..294734 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|162681|e_gw1.22.38.1
BRITEko00000,ko00001,ko00002,ko01000
KEGG rclassRC01381,RC03002,RC03007
KEGG ReactionR09396
KEGG ModuleM00378
KEGG Pathwayko00680,ko01120,map00680,map01120
KEGG koko:K11779
EC2.5.1.77
DescriptionElongator protein 3, MiaB family, Radical SAM
COG categoryH
Max annot lvl189775|Thermomicrobia
EggNOG OGsCOG1060@1|root,COG1060@2|Bacteria,2GBD4@200795|Chloroflexi,27YV4@189775|Thermomicrobia
Evalue2.55e-62
Seed ortholog1382356.JQMP01000001_gene1157
Hectar predicted targeting categoryother localisation
TranscriptId163003
TrackFilteredModels1
ProteinId162681
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|162681gene_6347Tribonema minus UTEX_B_3156 geneContig_22 292254..294734 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|162681Trimin1|162681|e_gw1.22.38.1Tribonema minus UTEX_B_3156 polypeptideContig_22 292254..294734 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6347_3exon_6347_3Tribonema minus UTEX_B_3156 exonContig_22 292254..292592 -
exon_6347_2exon_6347_2Tribonema minus UTEX_B_3156 exonContig_22 293319..293521 -
exon_6347_1exon_6347_1Tribonema minus UTEX_B_3156 exonContig_22 294638..294734 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6347CDS_6347Tribonema minus UTEX_B_3156 CDSContig_22 294638..294734 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6347 ID=mRNA_6347|Name=jgi.p|Trimin1|162681|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=639bp|location=Sequence derived from alignment at Contig_22:292254..294734- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGGACAGGACCCTGACTCAGGCAACCAAAAGCGTGGCGGCCATCCT
GGACCGAGCGCTTGCATATGGCGGACAAGTGATAACTGTCTCAGAAGGCG
CGCAGCTGCTGCGCGCGCGCGGCGGCGACCTGCGCGCCGTCGCCGCCGCC
GCGGACGAGCTGCGGCGGCGCAGCAGCGTCGGCGACGTCGTCACGTACGC
CGTCAACCGCAACATCAACTTCACCAACGCGTGCGTCAAGCGCTGCGGCT
TCTGCGCCTTCAGCCGGACGGGCGTGGACGCGGAGGCGTACCTGCTGCCG
ATCGACGAGATCGTGCGGCGCGCGCGCGAGGCGACGGAGACCTACGGCGC
CACCGAGGTCTGCGTGCAGGCGGGGCTCCCTCCCGGCATGCGCGGGACGC
TGTACGAGGAGATCGCAGCAGCGCTCAAGGCGGCGCTGCCGCGCGTCCAC
CTGCACGCGTTCTCGCCGGAGGAAGTCGTGTACGGTGCGCGGCGCAGCGG
CTGCAGCGTGGGCGCGTTCGTGGAGCGCCTCAGGGACGCGGGGGTGAGTC
GCCGCCGCCGCCGCTGCCGCCGCCGCTGCCGCCGCCGCTGCCGCCGCGTG
CGCCCGTGCACGTGCCGTTCTGTGTTGCCCGCCAGCTAA
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protein sequence of jgi.p|Trimin1|162681

>Trimin1|162681|e_gw1.22.38.1 ID=Trimin1|162681|e_gw1.22.38.1|Name=jgi.p|Trimin1|162681|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=213bp
MLDRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAA
ADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLP
IDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVH
LHAFSPEEVVYGARRSGCSVGAFVERLRDAGVSRRRRRCRRRCRRRCRRV
RPCTCRSVLPAS*
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mRNA from alignment at Contig_22:292254..294734-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6347 ID=mRNA_6347|Name=jgi.p|Trimin1|162681|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2481bp|location=Sequence derived from alignment at Contig_22:292254..294734- (Tribonema minus UTEX_B_3156 )
ATGCTGGACAGGACCCTGACTCAGGCAACCAAAAGCGTGGCGGCCATCCT GGACCGAGCGCTTGCATATGGCGGACAAGTGATAACTGTCTCAGAAGGTG AAAATTACACGTGAATCTTGGCTGCACGCATCCTGCGGCTTCCCATACCA TGGATTTGAACTTCAACTCGGAATGTTGTCGACTGAAGTCGACAAGCGCC CTAGTCGGTTGGGCTTTCTCGCGTGCACAGCGAGGACTCTCAAAGCAAAT CTCATTTTGAGCCTTAAAATCTCTTGTCGTTTCTGCAACATCGACGACAC AGCAAGGCGGTTGGATGTTCCCCTGATCATGCGGAGTCTGTCTGGATGCC CTATATGAATGCCAGAGCAATGCAATAGGTGTCATTTGCTGGACTGTATA TGAAGGTGAAGATTTTTTAAGCAAATGCAAGGGTGGCGAGATGGTTCCAC CAACTTACAGCGCAGTCTGGTGCAACAATATCAGCTGGTTAACAACGACG CGATCCGTACCTTGGGTTTTATTACTGTACCATGGCCCAGACACAACAGC ACGCAAACACAGTGATTGAGCTGTTGTGCTCGGGCAACAGCTGTTGCCAT TCCCGTATTGCAAATACAGGCTTGTCTGCTTGCTTGCGAACCGTGACGGC ATGGGTCAGACGACAGCAGTTGTAACTGCACGAAGCCCAAAAAGACTGAT CTGTGGCTGGTGCCGATTACGAACACCTCATAGGTAGAAAGACGTTTGTC ACGCTGTGTGAGGCAGTCGGGACGTGCCTGGCGGTGTGGTCATTACGCAT GCTTTGAAACAGGCGCAAATGCGCAGCAACCCAAGTACACGTGAGAGAGG TGCGCGCAGGCATACGACAGAGGCAAATGCCAGCCCTGAGCCGTCATGCC GCCGCGCCAATGGCATACAGTCTCACCATACCAAGAATACTATTTCATGA CCGTCAGCAAGCACGCAGCGTAATACACAGTGTCTGCATTGATTCGTCAT GTCACTGCATGACCTACGGTCGTCACTTCAGTTAATAGATTGCCTTCCAT CAATGAAGATCGTGCGCCAGTACACATGCACAGCACGCCATCGGGAGCAG AAGGCATCCACACACTCTCCTGCTCCTGATGGGCATGCGATCGCCACCAC AACCACCACATACACGCGCTCATGCTTTCTTCCTGCTGCAACGCGCCCTG CTGCGCCGCACAGGCGCGCAGCTGCTGCGCGCGCGCGGCGGCGACCTGCG CGCCGTCGCCGCCGCCGCGGACGAGCTGCGGCGGCGCAGCAGCGTCGGCG ACGTCGTCACGTACGCCGTCAACCGCAACATCAACTTCACCAACGCGTGC GTCAAGCGCTGCGGCTTCTGCGCCTTCAGCCGGACGGGCGTGGACGCGGA GGCGTACCTGCTGCCGGTGAGGCGGCGGCGGCGCGCATACATGGAGCGTT TAAGAGCCTGCACATATACTACTACTTCGAAGTATGAATCAGGGTTGGTT CCTGCGCTAACACAGCAGGCATGAAGAGCAGGCATGCGAGAGGTAGACAG CAGTCACGTGACTAGTTGACTTGGGCAATGCTCTCTGCACAGCACAGCCT AAGCGTAGCCTCAAGTGTTGAGGATACATGGATCGCCTGAGAGCTGCACA TATGAAATGAATCAAAAGATCGTAGAGCTCTAGGTGACAAGGTGTGGTCA GCCGTCAGATTGAATGCCTTCCACCAGTAACCGCGGTCGCCGCTGCTGCG CAATTGGCAATGTATACTACTGTCAGTGAGGGTTCCCGCGCCAGCACAGC AGGCATGCCAGAGATAGGCAGGCAGCAGTCACGTCACTCGTCGACTTATG TGCTCCGCTCTGTAGAGCACAGCCTAAGCGTAACCGTAAGAGCTGAGGAA GGGCGGCAGGCACGGGGTACGTATCCATCTGAATTGATGCCGTCTGCGCG AAGGTTCGCGCTGAGCATTGCGCGTCCGTGAGCTGCTGGAGACGTGCATT CATCTCATCACTTTCTGGAACGCGTCTGCCTATTGCGCCCTTCCAGCTTG CTAGAACGGCTTGTATGCCACCAGAACATCGTAGTCTGTCTGAATGTGCC CCCTGCCCCCCCCCCCCCCCCCCCCATGGCCCCCGCCGGCAGATCGACGA GATCGTGCGGCGCGCGCGCGAGGCGACGGAGACCTACGGCGCCACCGAGG TCTGCGTGCAGGCGGGGCTCCCTCCCGGCATGCGCGGGACGCTGTACGAG GAGATCGCAGCAGCGCTCAAGGCGGCGCTGCCGCGCGTCCACCTGCACGC GTTCTCGCCGGAGGAAGTCGTGTACGGTGCGCGGCGCAGCGGCTGCAGCG TGGGCGCGTTCGTGGAGCGCCTCAGGGACGCGGGGGTGAGTCGCCGCCGC CGCCGCTGCCGCCGCCGCTGCCGCCGCCGCTGCCGCCGCGTGCGCCCGTG CACGTGCCGTTCTGTGTTGCCCGCCAGCTAA
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Coding sequence (CDS) from alignment at Contig_22:292254..294734-

>mRNA_6347 ID=mRNA_6347|Name=jgi.p|Trimin1|162681|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=639bp|location=Sequence derived from alignment at Contig_22:292254..294734- (Tribonema minus UTEX_B_3156 )
ATGCTGGACAGGACCCTGACTCAGGCAACCAAAAGCGTGGCGGCCATCCT
GGACCGAGCGCTTGCATATGGCGGACAAGTGATAACTGTCTCAGAAGGCG
CGCAGCTGCTGCGCGCGCGCGGCGGCGACCTGCGCGCCGTCGCCGCCGCC
GCGGACGAGCTGCGGCGGCGCAGCAGCGTCGGCGACGTCGTCACGTACGC
CGTCAACCGCAACATCAACTTCACCAACGCGTGCGTCAAGCGCTGCGGCT
TCTGCGCCTTCAGCCGGACGGGCGTGGACGCGGAGGCGTACCTGCTGCCG
ATCGACGAGATCGTGCGGCGCGCGCGCGAGGCGACGGAGACCTACGGCGC
CACCGAGGTCTGCGTGCAGGCGGGGCTCCCTCCCGGCATGCGCGGGACGC
TGTACGAGGAGATCGCAGCAGCGCTCAAGGCGGCGCTGCCGCGCGTCCAC
CTGCACGCGTTCTCGCCGGAGGAAGTCGTGTACGGTGCGCGGCGCAGCGG
CTGCAGCGTGGGCGCGTTCGTGGAGCGCCTCAGGGACGCGGGGGTGAGTC
GCCGCCGCCGCCGCTGCCGCCGCCGCTGCCGCCGCCGCTGCCGCCGCGTG
CGCCCGTGCACGTGCCGTTCTGTGTTGCCCGCCAGCTAA
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