Trimin1|162681|e_gw1.22.38.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|162681
Unique NameTrimin1|162681|e_gw1.22.38.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length213
Homology
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: A0A835Z8B8_9STRA (Radical SAM core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B8_9STRA)

HSP 1 Score: 387 bits (993), Expect = 2.410e-135
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
Query:    1 MLDRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGVSRRRRRCXXXXXXXXXRVRPCTCRSVLPAS 212
            MLDRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGVSRRRRRCXXXXXXXXXRVRPCTCRSVLPAS
Sbjct:    1 MLDRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGVSRRRRRCXXXXXXXXXRVRPCTCRSVLPAS 212          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: UPI001E5DA08F (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH n=1 Tax=Thermorudis peleae TaxID=1382356 RepID=UPI001E5DA08F)

HSP 1 Score: 207 bits (527), Expect = 1.750e-61
Identity = 112/179 (62.57%), Postives = 134/179 (74.86%), Query Frame = 0
Query:    4 RTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 182
            R L Q  ++VA ILDRAL+  G+ ITV EG +L  A G +L A+   ADELRRR  VGDVVTY +NRNINFTN C+KRCGFCAFSR   + EAY LPIDE+VRRA+EA E  GATEVC+QAGLPP MRG  Y E+  A+K ALP +H+H FSPEEV YGA R+ CSV  +++ L+DAGV
Sbjct:   20 RLLDQLDRTVARILDRALS--GEDITVEEGERLFAAEGLELNALILVADELRRRR-VGDVVTYVINRNINFTNVCIKRCGFCAFSRGHREEEAYFLPIDEVVRRAQEAWEL-GATEVCIQAGLPPKMRGDYYIELTKAIKRALPDIHIHGFSPEEVWYGATRARCSVADYLQALKDAGV 194          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: A0A2H5Z5S6_9BACT (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase n=3 Tax=Bacteria TaxID=2 RepID=A0A2H5Z5S6_9BACT)

HSP 1 Score: 206 bits (524), Expect = 3.960e-61
Identity = 112/181 (61.88%), Postives = 131/181 (72.38%), Query Frame = 0
Query:    2 LDRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 182
            LDR L  A+  VA ILDR LA  G  +TV EG +L    G DL  V   ADELRRR+ VGDVVTY VNRNINFTN C+KRCGFCAFSR   + + Y LP++EIVRRAREA E  GATEVC+QAGLPP M   LY  I  A+KA LP +H+H FSPEEVVYGA R+ CS+  +++RLR+AGV
Sbjct:   11 LDRLLALASPDVARILDRVLA--GHEVTVDEGERLFETHGRDLFLVTLVADELRRRA-VGDVVTYVVNRNINFTNVCIKRCGFCAFSRGHREEQGYFLPLEEIVRRAREAWEL-GATEVCIQAGLPPKMDPDLYPTICRAIKAELPGIHIHGFSPEEVVYGALRARCSIAEYLQRLREAGV 187          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: A0A7C5RQS8_9CHLR (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C5RQS8_9CHLR)

HSP 1 Score: 200 bits (509), Expect = 5.880e-59
Identity = 108/180 (60.00%), Postives = 132/180 (73.33%), Query Frame = 0
Query:    3 DRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 182
            DR L    + VA IL++AL+  G+ I V EG  L R +G +L AV   ADELRRR  VGDVVTY +NRNINFTN C+K CGFCAFSR     EAY LPIDE+VRRA+EA E  GATEVC+QAGLPP + G  Y E+  A+K ALP +H+HAFSPEEVVYGA R+GCS+  +++ L++AGV
Sbjct:   19 DRILALVDRQVAGILEKALS--GEEIDVQEGEALFRTQGLELLAVILVADELRRRR-VGDVVTYVINRNINFTNVCIKHCGFCAFSRDHRVEEAYFLPIDEVVRRAQEAWEL-GATEVCIQAGLPPKLDGYYYVELTKAIKRALPDIHIHAFSPEEVVYGAIRAGCSIEDYLKALKEAGV 194          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: A0A536LZ19_9CHLR (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase n=3 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536LZ19_9CHLR)

HSP 1 Score: 198 bits (503), Expect = 5.170e-58
Identity = 106/181 (58.56%), Postives = 134/181 (74.03%), Query Frame = 0
Query:    3 DRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGG-DLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 182
            DR L +    VA +LDRALA  G+ I+V EG  LL A+G  ++ A+  AAD+LRRR+ VGDVVTY +NRNINFTN C+K C FCAFSR+  + EAY LP++EIVRRAREA E  GATEVC+QAGLPP M+G  Y E+  A+K  LP +H+H FSPEEV+YGA RS C++  ++  L+DAGV
Sbjct:   20 DRLLGEVDSGVAHVLDRALA--GEDISVEEGTSLLEAQGSANMNAIVLAADDLRRRT-VGDVVTYIINRNINFTNVCIKHCTFCAFSRSHREEEAYYLPVEEIVRRAREAWEL-GATEVCIQAGLPPKMKGDYYLELTRAIKKELPEIHIHGFSPEEVLYGAIRSRCTIREYLVGLKDAGV 196          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: A0A523ZA91_9CHLR (CofH family radical SAM protein (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A523ZA91_9CHLR)

HSP 1 Score: 192 bits (487), Expect = 1.230e-57
Identity = 102/180 (56.67%), Postives = 127/180 (70.56%), Query Frame = 0
Query:    3 DRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 182
            DR L    + VA +LD+AL   G+ I+V E   L  ARG +L A+  AADELRRRS VGDVVTY +NRNINFTN C+K CGFCAFSR   + EAY LPI+E+VRRA EA +  GATEVC+QAGLPP M G  Y ++  A+K  LP +H+H FSPEEV+YG+ R+ CS+   +  L+ AGV
Sbjct:   17 DRLLGSIDREVAGVLDKALQ--GEDISVEEATTLFEARGPELNAIVLAADELRRRS-VGDVVTYVINRNINFTNVCIKHCGFCAFSRDHREEEAYFLPIEEVVRRASEAWDL-GATEVCIQAGLPPKMDGHYYVDLTRAIKKELPDIHIHGFSPEEVLYGSIRARCSIEDHLRALKQAGV 192          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: I4EHB0_9CHLR (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase n=1 Tax=Nitrolancea hollandica Lb TaxID=1129897 RepID=I4EHB0_9CHLR)

HSP 1 Score: 196 bits (499), Expect = 1.540e-57
Identity = 107/181 (59.12%), Postives = 129/181 (71.27%), Query Frame = 0
Query:    2 LDRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 182
            LD  L+    + A ILDRAL  G   ITV EG +L    G +L  + A ADELRRRS VGDVVTY VNRNINFTN C+KRCGFCAFSR   + + Y LP++E++RRAREA E  GATEVC+QAGLPP M G LY  I  A+KA +P +H+H FSPEEV+YGA RS C++  F+ RL+ AGV
Sbjct:   12 LDSLLSCCDPATALILDRAL--GDYEITVDEGERLFSVHGVELLLLTAVADELRRRS-VGDVVTYIVNRNINFTNVCIKRCGFCAFSRGHREEQGYFLPLEEVLRRAREAWEV-GATEVCIQAGLPPKMDGDLYPSICRAIKAEIPDLHIHGFSPEEVLYGAIRSRCTIEEFIARLKAAGV 188          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: A0A3N0A5L1_9ARCH (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase n=3 Tax=unclassified Nitrosopumilus TaxID=2619919 RepID=A0A3N0A5L1_9ARCH)

HSP 1 Score: 196 bits (497), Expect = 1.940e-57
Identity = 104/180 (57.78%), Postives = 131/180 (72.78%), Query Frame = 0
Query:    3 DRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 182
            +  L  A   ++AIL+RAL+   + I+V EGA L  ARG D   V   ADELRRR  VGD VTY VNRNINFTN C+K+CGFCAFSR     E Y+LP +EIVRRA+EA  + GATEVC+QAGLPP M+G+LYEEI  ++KA +P +H+H FSPEE++YGA RSG +   F+ R++DAGV
Sbjct:    4 EALLRDADPEISAILERALSE--KEISVIEGAALYGARGLDYHLVGMVADELRRRR-VGDTVTYVVNRNINFTNVCIKQCGFCAFSRDFRQEEGYMLPTEEIVRRAKEA-RSLGATEVCIQAGLPPDMKGSLYEEICRSIKAEIPEIHIHGFSPEEILYGAARSGITPEEFLGRMKDAGV 179          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: A0A6L7TK58_9CHLR (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7TK58_9CHLR)

HSP 1 Score: 196 bits (497), Expect = 3.200e-57
Identity = 103/170 (60.59%), Postives = 128/170 (75.29%), Query Frame = 0
Query:   13 VAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 182
            VAA+LDRALA  G+ IT  EGA L    G +  A+  AADELRRR+ VGD+ TY VNRN+NFTN C+KRCGFCAFSR   + E Y LPI+EIVRRA+EA + YGATEVC+QAGLPP M G LY  + +A+K ALP +H+H FSPEEV+YG+ RS C++  ++E L+ AGV
Sbjct:   24 VAAVLDRALA--GEDITAEEGAVLFATTGPEYNAMVLAADELRRRT-VGDIATYVVNRNVNFTNVCIKRCGFCAFSRDFREEEGYFLPIEEIVRRAQEAWD-YGATEVCIQAGLPPQMEGDLYIRLCSAIKEALPDMHIHGFSPEEVLYGSIRSRCTIREYLEGLKAAGV 189          
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Match: B9L535_THERP (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) TaxID=309801 RepID=B9L535_THERP)

HSP 1 Score: 195 bits (496), Expect = 5.170e-57
Identity = 108/182 (59.34%), Postives = 130/182 (71.43%), Query Frame = 0
Query:    1 MLDRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAAADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLPIDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVHLHAFSPEEVVYGARRSGCSVGAFVERLRDAGV 182
            +L+R L  A+  VA ILDRAL+  G  +T+ EG +L    G DL  V   ADELRRR+ VGDVVTY VNRNINFTN C+KRCGFCAFSR   + + Y LP++EIVRRAREA E  GATEVC+QAGLPP M   LY  I  A+KA LP +H+H FSPEEVVYGA R+  S+  ++ RL+ AGV
Sbjct:   10 LLERQLGLASPEVARILDRALS--GHELTIEEGERLFATHGRDLFLVTLVADELRRRA-VGDVVTYVVNRNINFTNVCIKRCGFCAFSRGHREEQGYFLPLEEIVRRAREAWEL-GATEVCIQAGLPPKMDPDLYPTICRAIKAELPEIHIHGFSPEEVVYGALRARTSIEEYLLRLKAAGV 187          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|162681 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8B8_9STRA2.410e-135100.00Radical SAM core domain-containing protein n=1 Tax... [more]
UPI001E5DA08F1.750e-6162.575-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]
A0A2H5Z5S6_9BACT3.960e-6161.885-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]
A0A7C5RQS8_9CHLR5.880e-5960.005-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]
A0A536LZ19_9CHLR5.170e-5858.565-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]
A0A523ZA91_9CHLR1.230e-5756.67CofH family radical SAM protein (Fragment) n=1 Tax... [more]
I4EHB0_9CHLR1.540e-5759.125-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]
A0A3N0A5L1_9ARCH1.940e-5757.785-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]
A0A6L7TK58_9CHLR3.200e-5760.595-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]
B9L535_THERP5.170e-5759.345-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007197Radical SAMPFAMPF04055Radical_SAMcoord: 72..183
e-value: 2.6E-8
score: 34.4
IPR007197Radical SAMSFLDSFLDS00029Radical_SAMcoord: 72..182
e-value: 6.2E-11
score: 37.5
IPR007197Radical SAMPROSITEPS51918RADICAL_SAMcoord: 64..212
score: 13.08821
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 8..198
e-value: 5.1E-26
score: 93.4
NoneNo IPR availablePIRSRPIRSR001619-1PIRSR001619-1coord: 70..125
e-value: 0.012
score: 12.7
NoneNo IPR availableCDDcd01335Radical_SAMcoord: 72..152
e-value: 7.28888E-6
score: 43.091
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 28..184
IPR034405F420, menaquinone cofactor biosynthesisPANTHERPTHR43076FO SYNTHASE (COFH)coord: 7..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_22contigContig_22:292254..294734 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|162681mRNA_6347Tribonema minus UTEX_B_3156 mRNAContig_22 292254..294734 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|162681|e_gw1.22.38.1 ID=Trimin1|162681|e_gw1.22.38.1|Name=jgi.p|Trimin1|162681|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=213bp
MLDRTLTQATKSVAAILDRALAYGGQVITVSEGAQLLRARGGDLRAVAAA
ADELRRRSSVGDVVTYAVNRNINFTNACVKRCGFCAFSRTGVDAEAYLLP
IDEIVRRAREATETYGATEVCVQAGLPPGMRGTLYEEIAAALKAALPRVH
LHAFSPEEVVYGARRSGCSVGAFVERLRDAGVSRRRRRCRRRCRRRCRRV
RPCTCRSVLPAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007197rSAM
IPR013785Aldolase_TIM
IPR034405F420