mRNA_6257 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349710 vs. uniprot
Match: A0A835Z0V4_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0V4_9STRA) HSP 1 Score: 350 bits (898), Expect = 1.510e-119 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 3 Query: 60 MADDSDEDNPLPRWLEGDSLAPPCQAGYDVVQALLEFAGVTAKDIVYDLGCGDGRFCTEAAEKFGARSCGIEIEEDLVQSFRAAVEAKGLQQRVRVVHGDLLEQDLSDATIIVMYLLPEALALLEPKLIRELSRGCVVVCNTWGLKSLVPVRQAAVGPFSQTNLLMYTRDSLPP 581 MADDSDEDNPLPRWLEGDSLAPPCQAGYDVVQALLEFAGVTAKDIVYDLGCGDGRFCTEAAEKFGARSCGIEIEEDLVQSFRAAVEAKGLQQRVRVVHGDLLEQDLSDATIIVMYLLPEALALLEPKLIRELSRGCVVVCNTWGLKSLVPVRQAAVGPFSQTNLLMYTRDSLPP Sbjct: 1 MADDSDEDNPLPRWLEGDSLAPPCQAGYDVVQALLEFAGVTAKDIVYDLGCGDGRFCTEAAEKFGARSCGIEIEEDLVQSFRAAVEAKGLQQRVRVVHGDLLEQDLSDATIIVMYLLPEALALLEPKLIRELSRGCVVVCNTWGLKSLVPVRQAAVGPFSQTNLLMYTRDSLPP 174
BLAST of jgi.p|Trimin1|349710 vs. uniprot
Match: A0A067CEZ1_SAPPC (Methyltransf_25 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CEZ1_SAPPC) HSP 1 Score: 184 bits (467), Expect = 3.210e-54 Identity = 88/170 (51.76%), Postives = 116/170 (68.24%), Query Frame = 3 Query: 66 DDSDEDNPLP-RWLEGDSLAPPCQAGYDVVQALLEFAGVTAKDIVYDLGCGDGRFCTEAAEKFGARSCGIEIEEDLVQSFRAAVEAKGLQQRVRVVHGDLLEQDLSDATIIVMYLLPEALALLEPKLIRELSRGCVVVCNTWGLKSLVPVRQAAVGPFSQTNLLMYTRDS 572 DD +N P WLEGDSLAPPCQ+ YD+VQA+++FA V D+V+DLGCGDGR C AA + G R+ GIEIE L+ F ++ LQ +VR++H DL++ DLS+AT+IV YLLPEAL LL PKL L+RGC +V NTWG+ + P + VG ++ L +YT S Sbjct: 8 DDEGYENEQPFMWLEGDSLAPPCQSDYDIVQAIIDFANVQPTDVVFDLGCGDGRICIGAARQHGCRAVGIEIEAPLIAKFEQSIAKYKLQDKVRMLHADLMDADLSEATVIVTYLLPEALTLLAPKLEAALTRGCRIVSNTWGIPGMTPAARVDVGQYANVPLYLYTLQS 177
BLAST of jgi.p|Trimin1|349710 vs. uniprot
Match: M4BRJ3_HYAAE (Methyltranfer_dom domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BRJ3_HYAAE) HSP 1 Score: 182 bits (461), Expect = 3.190e-53 Identity = 92/177 (51.98%), Postives = 121/177 (68.36%), Query Frame = 3 Query: 54 ATMADDSDEDNPLP-RWLEGDSLAPPCQAGYDVVQALLEFAGVTAKDIVYDLGCGDGRFCTEAAEKFGARSCGIEIEEDLVQSFRAAVEAKGLQQRVRVVHGDLLEQDLSDATIIVMYLLPEALALLEPKLIRELS---RGCVVVCNTWGLKSLVPVRQAAVGPFSQTNLLMYTRDS 572 AT + D +E +P W+EGDSLAPPCQ+ DVV ++E A +T D+++DLGCGDGR C EAA++FGAR+ G+EIEE L++ FR V K LQQ V V HGDLLE+DLSDAT+IV YLLPEAL L KLI+ L+ + ++CNTWG++ L P + GP+ L +Y S Sbjct: 2 ATQSSDDEEADPGAFMWIEGDSLAPPCQSDRDVVAKIVEIACLTCDDVLFDLGCGDGRICIEAAKRFGARARGVEIEEFLIERFRRLVAVKDLQQLVSVSHGDLLEEDLSDATVIVTYLLPEALEQLSAKLIKLLNQPDKNVRIICNTWGIRDLTPDERHDTGPYGNVPLFVYRSSS 178
BLAST of jgi.p|Trimin1|349710 vs. uniprot
Match: A0A1V9YP44_9STRA (Methyltransf_25 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YP44_9STRA) HSP 1 Score: 181 bits (460), Expect = 3.970e-53 Identity = 90/167 (53.89%), Postives = 113/167 (67.66%), Query Frame = 3 Query: 66 DDSDEDNPLP-RWLEGDSLAPPCQAGYDVVQALLEFAGVTAKDIVYDLGCGDGRFCTEAAEKFGARSCGIEIEEDLVQSFRAAVEAKGLQQRVRVVHGDLLEQDLSDATIIVMYLLPEALALLEPKLIRELSRGCVVVCNTWGLKSLVPVRQAAVGPFSQTNLLMYT 563 DD +N P WLEGDSLAPPCQ+ YD+VQA+++FAGV D+V+DLGCGDGR C AA + G R+ GIEIE L+ F ++ GL V V+H DL+E DLS AT+IV YLLPEAL LL PKL L+RG +V NTWG+ LVP +A VG + L +Y+ Sbjct: 12 DDEGYENEQPFMWLEGDSLAPPCQSDYDIVQAIVDFAGVQPTDVVFDLGCGDGRICIGAARQHGCRAVGIEIEAPLIAKFEQSIAKYGLADLVSVLHADLMEADLSSATVIVTYLLPEALTLLAPKLEAALARGARIVSNTWGVPGLVPTARADVGQYQNVPLYLYS 178
BLAST of jgi.p|Trimin1|349710 vs. uniprot
Match: A0A1W0A447_9STRA (Methyltransf_25 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A447_9STRA) HSP 1 Score: 181 bits (459), Expect = 5.270e-53 Identity = 87/171 (50.88%), Postives = 119/171 (69.59%), Query Frame = 3 Query: 63 ADDSDE--DNPLP-RWLEGDSLAPPCQAGYDVVQALLEFAGVTAKDIVYDLGCGDGRFCTEAAEKFGARSCGIEIEEDLVQSFRAAVEAKGLQQRVRVVHGDLLEQDLSDATIIVMYLLPEALALLEPKLIRELSRGCVVVCNTWGLKSLVPVRQAAVGPFSQTNLLMYTR 566 +D+ DE +N P WLEGDSLAPPCQ+ Y++VQ++++FA VT D+VYDLGCGDGR C AA ++G R+ GIEIEE L+ F+ ++ LQ +VR VH DL+E DLS AT+IV YLLPEAL LL KL + + +GC +V NTWG+ + P + VG + L +Y++ Sbjct: 8 SDEEDEGYENEQPFMWLEGDSLAPPCQSDYEIVQSIVDFAKVTPSDVVYDLGCGDGRICIGAARRYGCRAVGIEIEEHLIAKFQQSIVKYNLQDKVRFVHADLMEADLSAATVIVTYLLPEALTLLSKKLEKAIEQGCRIVSNTWGIPGMTPKARIDVGQYQNVPLYLYSQ 178
BLAST of jgi.p|Trimin1|349710 vs. uniprot
Match: A0A2P4XRJ9_9STRA (Methyltranfer_dom domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRJ9_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.970e-52 Identity = 90/168 (53.57%), Postives = 117/168 (69.64%), Query Frame = 3 Query: 69 DSDEDNPLP-RWLEGDSLAPPCQAGYDVVQALLEFAGVTAKDIVYDLGCGDGRFCTEAAEKFGARSCGIEIEEDLVQSFRAAVEAKGLQQRVRVVHGDLLEQDLSDATIIVMYLLPEALALLEPKLIRELS---RGCVVVCNTWGLKSLVPVRQAAVGPFSQTNLLMY 560 D DE NP W+EGDSLAPPCQ+ DVV ++E A ++ D+++DLGCGDGR C EAAE+FGAR+ G+EIEE L++ FR + A GLQQ V V HGDLLE+DLSDAT+IV YLLP+AL L PK + LS + ++CNTWG++ L P + GP+ L +Y Sbjct: 6 DDDELNPGAFMWIEGDSLAPPCQSDRDVVSKIVEIAKLSPHDVLFDLGCGDGRICIEAAERFGARARGVEIEEFLIKRFRELIVANGLQQLVSVSHGDLLEEDLSDATVIVTYLLPDALDQLTPKFTKLLSQTDKDVRIICNTWGIRGLTPDERIDAGPYGNVPLFVY 173
BLAST of jgi.p|Trimin1|349710 vs. uniprot
Match: A0A425C4H3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A425C4H3_9STRA) HSP 1 Score: 180 bits (456), Expect = 3.050e-52 Identity = 85/169 (50.30%), Postives = 122/169 (72.19%), Query Frame = 3 Query: 63 ADDSDEDNPLPRWLEGDSLAPPCQAGYDVVQALLEFAGVTAKDIVYDLGCGDGRFCTEAAEKFGARSCGIEIEEDLVQSFRAAVEAKGLQQRVRVVHGDLLEQDLSDATIIVMYLLPEALALLEPKLIRELS---RGCVVVCNTWGLKSLVPVRQAAVGPFSQTNLLMY 560 +D++++++ + W+EGDSLAPPCQ+ DVV ++E A VT D+V+DLGCGDGR C EAA++FGAR+ G+EIEE L++ FR + A +QQ V V HGDLLE+DLS+AT+IV YLLP+AL L PK ++ L+ + ++CNTWG++ L P + VGP+ L +Y Sbjct: 12 SDENEQNSGVFMWIEGDSLAPPCQSDRDVVSKIVEIARVTPDDVVFDLGCGDGRICIEAAKRFGARARGVEIEEFLIERFRKLIVANEIQQLVSVSHGDLLEEDLSEATVIVTYLLPDALDQLTPKFVKLLNQSDKNVRIICNTWGIRGLTPDERYDVGPYDNVPLFVY 180
BLAST of jgi.p|Trimin1|349710 vs. uniprot
Match: A0A485LFZ9_9STRA (Aste57867_19079 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LFZ9_9STRA) HSP 1 Score: 179 bits (453), Expect = 4.900e-52 Identity = 88/169 (52.07%), Postives = 111/169 (65.68%), Query Frame = 3 Query: 69 DSDEDNPLPRWLEGDSLAPPCQAGYDVVQALLEFAGVTAKDIVYDLGCGDGRFCTEAAEKFGARSCGIEIEEDLVQSFRAAVEAKGLQQRVRVVHGDLLEQDLSDATIIVMYLLPEALALLEPKLIRELSRGCVVVCNTWGLKSLVPVRQAAVGPFSQTNLLMYTRDSL 575 D + D WLEGDSLAPPCQ+ YDVV +L FA VT+ D+V+DLGCGDGR C AA KFGA + G+EIE+ L+Q F+ + L+ RV V HGDL+E DLS AT+IV YLLPEAL +L KL L RGC +V N+W + + + VGPF+ L +Y D L Sbjct: 10 DDEGDESTYMWLEGDSLAPPCQSEYDVVYDILRFAKVTSSDVVFDLGCGDGRICIAAARKFGASAVGVEIEDHLIQKFQQKITRYALEDRVHVRHGDLMETDLSRATVIVTYLLPEALVMLTDKLKACLDRGCRIVSNSWHIPGMDAQAKINVGPFNNVPLFLYVNDPL 178
BLAST of jgi.p|Trimin1|349710 vs. uniprot
Match: A0A024UAF7_9STRA (rADc domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UAF7_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.570e-51 Identity = 89/171 (52.05%), Postives = 113/171 (66.08%), Query Frame = 3 Query: 54 ATMADDSDEDNPLPRWLEGDSLAPPCQAGYDVVQALLEFAGVTAKDIVYDLGCGDGRFCTEAAEKFGARSCGIEIEEDLVQSFRAAVEAKGLQQRVRVVHGDLLEQDLSDATIIVMYLLPEALALLEPKLIRELSRGCVVVCNTWGLKSLVPVRQAAVGPFSQTNLLMYTR 566 A +DD +++ WLEGDSLAPPCQ+ YDVV +L+ A VTA D+V+DLGCGDGR C AA K+GA + GIEIEE L+ F+ ++ L RVRV+HGDLL+ DLS AT+IV YLLPEALA L L+RGC +V N+W L V + VGPF L +Y + Sbjct: 6 AEWSDDEGDESTF-MWLEGDSLAPPCQSEYDVVHEILKLANVTANDVVFDLGCGDGRICIAAARKYGASAVGIEIEEHLIAKFQGKIDRYNLHDRVRVLHGDLLDADLSSATVIVTYLLPEALAQLTHTFEAALARGCRIVSNSWHLSGFVHCDKKDVGPFDNVPLYLYHK 175
BLAST of jgi.p|Trimin1|349710 vs. uniprot
Match: A0A662WR70_9STRA (Methyltranfer_dom domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WR70_9STRA) HSP 1 Score: 177 bits (450), Expect = 2.210e-51 Identity = 86/164 (52.44%), Postives = 112/164 (68.29%), Query Frame = 3 Query: 99 WLEGDSLAPPCQAGYDVVQALLEFAGVTAKDIVYDLGCGDGRFCTEAAEKFGARSCGIEIEEDLVQSFRAAVEAKGLQQRVRVVHGDLLEQDLSDATIIVMYLLPEALALLEPKLIRELS---RGCVVVCNTWGLKSLVPVRQAAVGPFSQTNLLMYTRDSLPP 581 W+EGDSLAPPCQ+ DVV ++ A VT D++ DLGCGDGR C EAA++FGAR+ G+EIEE L++ FR + A GLQ+ V V HGDL E+DLSDAT+IV YLLPEAL L PK + LS R ++CNTWG++ L P + GP+ L +Y ++ P Sbjct: 31 WMEGDSLAPPCQSDRDVVSKIVAIANVTPDDVLIDLGCGDGRICIEAAKRFGARARGVEIEEFLIERFRQLIAADGLQELVSVSHGDLREEDLSDATVIVTYLLPEALDELTPKFTKLLSQKGRDVRIICNTWGIRGLTPTERHDAGPYGNVPLFVYRSSAVSP 194 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349710 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6257 ID=mRNA_6257|Name=jgi.p|Trimin1|349710|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=984bp|location=Sequence derived from alignment at Contig_47:604860..607019+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CAGGCAATCATCCTTCAGTGAGCATATGCATGCTGCAGGCGCAGTTGATTback to top protein sequence of jgi.p|Trimin1|349710 >Trimin1|349710|estExt_Genemark1.C_Ctg_470079 ID=Trimin1|349710|estExt_Genemark1.C_Ctg_470079|Name=jgi.p|Trimin1|349710|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=175bp MADDSDEDNPLPRWLEGDSLAPPCQAGYDVVQALLEFAGVTAKDIVYDLGback to top mRNA from alignment at Contig_47:604860..607019+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6257 ID=mRNA_6257|Name=jgi.p|Trimin1|349710|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2160bp|location=Sequence derived from alignment at Contig_47:604860..607019+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_47:604860..607019+ >mRNA_6257 ID=mRNA_6257|Name=jgi.p|Trimin1|349710|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=525bp|location=Sequence derived from alignment at Contig_47:604860..607019+ (Tribonema minus UTEX_B_3156 )back to top |