mRNA_6188 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A836CDL2_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDL2_9STRA) HSP 1 Score: 941 bits (2432), Expect = 0.000e+0 Identity = 490/490 (100.00%), Postives = 490/490 (100.00%), Query Frame = 2 Query: 95 MRRKATAIAMLLGYCRAAVKALCLPAARPYSMLVHWRHGKAGGHDWFPSEMRQAELLSVAETLGLDGRAITFTNAQRGGGADAEAVEALQFVHGLPDPDAATAVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDGSWCARVRHFGAGGGGKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAAAGALLTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQLAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLLTYVKERDAASGEDVLPPPAIALTAREEGGAPALGLVRGLADRVPAAAAAAVAPVSAG 1564 MRRKATAIAMLLGYCRAAVKALCLPAARPYSMLVHWRHGKAGGHDWFPSEMRQAELLSVAETLGLDGRAITFTNAQRGGGADAEAVEALQFVHGLPDPDAATAVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDGSWCARVRHFGAGGGGKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAAAGALLTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQLAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLLTYVKERDAASGEDVLPPPAIALTAREEGGAPALGLVRGLADRVPAAAAAAVAPVSAG Sbjct: 1 MRRKATAIAMLLGYCRAAVKALCLPAARPYSMLVHWRHGKAGGHDWFPSEMRQAELLSVAETLGLDGRAITFTNAQRGGGADAEAVEALQFVHGLPDPDAATAVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDGSWCARVRHFGAGGGGKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAAAGALLTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQLAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLLTYVKERDAASGEDVLPPPAIALTAREEGGAPALGLVRGLADRVPAAAAAAVAPVSAG 490
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A7S3Q840_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q840_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.010e-23 Identity = 109/349 (31.23%), Postives = 163/349 (46.70%), Query Frame = 2 Query: 413 RCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDGS-----WCARVRHFGAGGGGK------YGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAAAGALLTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVT-VGIET--DARLRYHQLAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARALTPQAAGLDAITALLRLSA-ASGVLRVGGRVVCFAPTTADCGDVAPHLPS-----HAALRLESAARQPLSSALARWLLTY 1399 R VR+L + A G Y + A TA+A+++ +GS W +R +G G K YG+ MRSP +EE + L GP+ L P +LY+ G G LLTR G + + A + R ++ TT+ +F M N A+V+ G + DPF GS +LLAA+ + V VG+E + ++ + +F + A++ GD S + + AA A G PFDA++TDPPYG R + P L A R +LR+GGR+V F P + D+A +PS +A L QPL+ +L+RWL+ Y Sbjct: 199 RSALVRSLFEIVAEGDSYPEL---AQTALASNNLNDMMTSNGSHSKDTWRVSMRQYG--GEAKIEKQKQYGKKMRSPM-QEELRAINQMEKLFIEFTGPVDLKDPDISLYLFEGLKGKGRKKILARLLTR----GANTSAIAPNTRICVTNTTLCPLAAFTMCNVARVKPGYRIFDPFCGSCAILLAASMIEPSVKIVGVEIAHNGQVNRDNVVKDFTSRNLTLPAAIIRGDSMSEDVRKAARIAVGDEPFDAIITDPPYGIRETSEFCVDPPLINLVRCIAKDRARGDGQRLLRLGGRLVAFVPNQ-EGDDIAADMPSIEDLAYAGLEFIKMFEQPLNDSLSRWLVEY 536
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A2V3J5P2_9FLOR (tRNA (Guanine(10)-N2)-methyltransferase-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5P2_9FLOR) HSP 1 Score: 110 bits (276), Expect = 1.980e-22 Identity = 131/407 (32.19%), Postives = 185/407 (45.45%), Query Frame = 2 Query: 305 TFTNAQRGGGADAEAVEALQFVHGLPDPDAATAVAARCVCVRALHHVWAHGQDYADC-GARASTAIAADDDRVARMGDGSWCARVRHFGAGGGGKYGRAMRSPPHREEHAVLAH-FAPLLTRVPGPISLSAPAHTLYVMSGDFDV-GEGAAAG----ALLTRQLGAGFDF--NPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQLA---ANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRA----------------NEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLLTYV----KERDAASGE 1429 T TN +RG E + F L D A A+A+RCV +RA++ HG Y C G+ S A D +A + R F G KY E+ H F+ +L PG + + H L+++ F V G G G R++ G + Y+L RR ++ T+MD E+SFVMAN A VR D V DPF G+GG++LA AA GA V G LR A ANF+Q V + D+ ++ + G FDAV+ DPPYG + N + T + +D + L +A+ VL GGR+V + PTT D A +P++AALRL QPL+S ++R ++T V KER+ E Sbjct: 50 TPTNPKRGPAGSVIYGE-IFFFADLKDVAEARALASRCVLLRAIYITCGHGDSYEQCIGSIDSPAF---KDTLAPLRCEKTKPSFRCFVEAFGRKYSV--------EQQLERIHKFSEVLRPFPGVVRMKDADHQLWILEDAFPVQGHGTPHGKPRQVFFARKVADGQKHLGSKYSLKRRRYIGPTSMDAELSFVMANMAHVRKDDLVNDPFCGTGGIMLACAARGAHVIGGDINILALRGKGEATIDANFDQYEVPRPLGNIRADVLNSP-----IVERPGGVFDAVVCDPPYGIKEGMKVFREDFVDASLQRNHFQG-TQRVRFVDFLAGFLEYAAS--VLVPGGRLVYWLPTTTDY--TAEDVPTNAALRLVGNCEQPLTSRMSRRMITMVRLSEKEREHNESE 434
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: B7G1Y7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G1Y7_PHATC) HSP 1 Score: 107 bits (268), Expect = 1.850e-21 Identity = 125/436 (28.67%), Postives = 201/436 (46.10%), Query Frame = 2 Query: 191 LVHWRHGKAGGHDWFPSEMRQAE----LLSVAETLGLDGRAITFTNA-QRGGGADAEAVE------ALQFVHGLP---DPDAATAVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDGS------WCARVRHFGAG----GGGKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAAAGALLTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGV-TVGIET--DARLRYHQLAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKR-ANEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTAD--CGDVAP--HLPSHAALRLESAARQPLSSALARWLLTYV 1402 ++HW K G D + + R E L +V ET +D + F +A G + +A + A+Q++H +P + A RC + AL+ + + Y AS+AI ++ M GS WC RVR FG +YG RS +E L PLL + G ++L++P +Y+ G + +L R++ +G A + R ++ T + +F++ N A +R ++LDP+ GSG +LLAAA + +VGIE + + + +F+ + AL+HGD + + A +A G FD ++TDPPYG R ++ LTP +I L +L+ GGR+VCF P D DV P A L+ E QPL+ +L+RWL++Y+ Sbjct: 44 IIHW---KGEGVDGYSLQFRHLEFRGALSAVLETSVVD---VAFEDALDYTGSVELQASKLVQFNSAMQYIH-IPRNIHRKSLVEAAERCSLIHALYDIVSASDAYPPL---ASSAI--QNNGFGDMYSGSQNEEATWCVRVRRFGQSLCSEKEKRYGARARSMKLEKE--ALKALEPLLLQFGGKVNLNSPDCKIYIFDGLVRTDK------VLARRITSGPRVFAIAPNTRICVTNTPLCPVAAFLLCNVAGIRKIVSILDPYVGSGAILLAAAMIQPSCRSVGIEIADNGYVNRDDILLDFDTRNLTRPLALLHGDSTNELMREEAKKAIGNDAFDLIITDPPYGIRESSNYNTLTPAEELFQSIAKDRDLG--RRLLKKGGRLVCFVPCNEDENLEDVLPSREQAESAGLQCEVVREQPLNDSLSRWLVSYL 457
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A7S3V5S7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5S7_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.560e-20 Identity = 118/444 (26.58%), Postives = 193/444 (43.47%), Query Frame = 2 Query: 191 LVHWRHGKAGGHDWFPSEMRQAELLSVAETLGLD--------------GRAITFTNAQRGGGADAEAVE-ALQFV--------HGLPD----PDAATAVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDD-RVARMGDGSWCARVRHFGAGGG----GKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAAAGALLTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGV-TVGIET--DARLRYHQLAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHA-----ALRLESAARQPLSSALARWLLTYV 1402 ++HWR K+ G+ RQ E S E+ LD + F A+ + A E ALQ+V + L D D RC +R+L + A G + D + DD + + + +W R+R +G+ +YG+ MRSP +E A + L + G + L LY+ G GE ++ R + G + + A R ++ T + +F M N A++R G +LDP+AGS +LLAAA + V +VGIE + ++ + +FE + A++ GD + + + A+ + PFD ++TDPPYG R + P + + R + + +L+ GGR+V F P D+ +PS A LR QPL+ +L+RWL+ Y+ Sbjct: 71 MIHWRGEKSHGNSL---NFRQLEFTSAFESSVLDPDSDIVSASVKFSPSLSSNFEAAKEMTNYEVHAYENALQYVSIRNYEADNNLTDIITSNDVLIRSVKRCSLIRSLFEIVADGDTFEDLAHNTIMSGHLDDMMQGGKNSESTWAVRLRQYGSSSKPEKQAQYGKKMRSPMS-QEIAAIDEMKDLFIKFTGAVDLKDADINLYLFEGLG--GEKYNGRKVIARLMTRGANTSSIAPKTRICVTNTPLCPLAAFTMCNVARIRPGLRILDPYAGSCAILLAAAMIEPSVKSVGIEIAHNGQVNRDDIMKDFESRNLALPAAIIRGDSSQDKVRREAMESVENKPFDLIITDPPYGIREKTGFCVDPPVVSVVKCISEDRRNG-NRLLKKGGRLVAFVPNQHG-DDIQLDMPSDADLQKAGLRFCQMLEQPLNDSLSRWLVEYL 506
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A8J5XWK4_DIALT (UPF0020 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XWK4_DIALT) HSP 1 Score: 103 bits (257), Expect = 6.990e-20 Identity = 145/474 (30.59%), Postives = 205/474 (43.25%), Query Frame = 2 Query: 179 PYSMLVHWRHGKAGGHDWFPSEMRQAELLSVAETLGLD---------------GRAITFTNAQRGGGADAEAVEALQFVHGLPDPDAATAVAARCVCVRALHHVWAHGQDY----ADCGARASTAIAA--DDDRVARMGDGSWCARVRHFGAGGGGKYGRAMRSPPHREEHAVL-AHFAPLLTRVPGPISLSAPAHTLYV-----MSG---DFDVGEGAAAGALLTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQ-----LAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPF-DAVLTDPPYGKRANEARALTPQAAGL-------------------DAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLLTYVKERDAASGEDV 1435 PY LVH+ H W R EL +VA+ +G++ R + A+R +AEA E V L D A +A+R V V+++ +W G+ + A C A A I +DR R+ RV FG KY R+ A++ H A L + G + L P +T+ V MSG G G + R G + + L R FL T++DH++S V+AN A R G VLDPF G+ +L+ AA GA V +G + DAR + + ANF Q P L+ D ++A + PF DA++ DPPYG RA+ + L A+ L + ALL +A+ L +GGR+V PTT D A P H AL L + + QP+SS R L+T VK R+ A G V Sbjct: 3 PY--LVHFTH------KWLA--FRVPELEAVAQLMGIELALDDESAREELRQERRGVIGDPARR---REAEARERADVVVHLRSDDDARRLASRLVLVQSIVALWGSGRTWDEVLARCAASAHERIEPYLTEDRTFRV-------RVEAFGC----KY-------QTRDAVALMQTHLARL--ELKGTVRLKKPDNTVLVYVDHGMSGMPTPATPPRGIHVGRRIARAPGLSHA-DKFRLPDRRFLGPTSLDHQLSMVIANQAHARPGALVLDPFCGTASILVGCAAFGARV-LGADLDARNLVGKGEGRTIWANFAQYGFAPPLGLLRADFSAASTCWRHV------PFLDAIVCDPPYGVRASSKK-LADGASDLLHEPGHEEHVPMRERLNIEPLLDALLAFAASR--LVIGGRLVFLLPTTTDMRGSA--APEHPALELRAESEQPISSRWCRRLVTMVKVRECAPGMHV 430
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A4D9D5F5_9STRA (Peptidase_M3 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5F5_9STRA) HSP 1 Score: 104 bits (260), Expect = 7.630e-20 Identity = 122/390 (31.28%), Postives = 175/390 (44.87%), Query Frame = 2 Query: 293 GRAITFTNAQRGGGADAEAVEALQFVHGLPDPDAAT-AVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARM-GDGSWCARVRHFGAGGGGKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAAAGAL-LTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQLAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCG--DVAPHLPSHAALRLESAARQPLS--------SALARWLLTYVKERDAAS 1423 GR N +GGG + + L +VHGLPD A+ V V A + VWA +++C A +T + +D R++ + + SW A F A K GR ++ + HF L +VPGP+ L +P L ++ D D GA + LTR++ G L R L L P G LLAAA LGA VTVG++ +A + ++A NF + P + G + QA LR G PFD ++ DPPYGKR E + + +AI L L++ +LRVGGR+V F P D+ P LP+H +L + S +RQPL+ S RW L V ++ A S Sbjct: 140 GRRKADKNEGKGGGCSSSS---LVYVHGLPDDGKVMQAIVQSAVLVHAAYAVWACASAFSEC-ADVATRMLLEDARLSSLRANASWAAESYVFSA----KSGRRKDVALLPQKLYEMRHF---LRQVPGPVDLKSPDVRLVLLE-DGDAEAGARPHQVWLTREIARG----SRGLTERLSLRRRP---------------------LRPDGGXXXXLLAAAQLGAQVTVGVDVNASIDIGRVADNFRVLGLRPPEDFLFGRADDPKVQAG-LRRWG--PFDVLVVDPPYGKR--EKGPVRAEGVIQEAIYTLYELASKDEILRVGGRLVFFLPMDPRWASRDIIPLLPTHPSLVIVSISRQPLNTRPVMSRASVYRRWRLLSVGDKYAPS 487
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: T0SIC9_SAPDV (UPF0020 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SIC9_SAPDV) HSP 1 Score: 99.0 bits (245), Expect = 1.670e-18 Identity = 115/400 (28.75%), Postives = 174/400 (43.50%), Query Frame = 2 Query: 377 LPDPDAATAVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDGS--WCARVRHFGAGGGGKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAA-----------AGALLTRQLGAGFDF-NPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQ----LAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARA---------------------------------------LTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLLTYVK 1405 LP A ++ R + V+ ++ +W HG+ Y + A ++AA ++R + D S W V FG K ++ RE + F GP+ LS P++T ++ D V E A AGA R G D + L RRA++ T+MD E++ +M N A V GD V+DPF G+G +L+ A G G+ +G + D R+ + + + +NF Q + P+ LV D + + + FDAV+ DPPYG RA ++ +T A D + LL +A + LRVGGRVV PTT D D LP H LR+ + + + L+S AR L+T K Sbjct: 51 LPSEAHAKFLSQRGILVKGVYEIWGHGKTYDEVVA----SVAAFEERTTYVEDASLSWKINVDAFGL----KLSMEQQTA-RRERFREILPFQ-------GPVVLSNPSNTFLILE-DIGVDEAAMTPQRIFFLRTLAGAERNRGRGGARDLVDMQTLKRRAYIGPTSMDAEMALLMCNMALVMPGDLVIDPFVGTGSVLVPCATFG-GICMGTDIDTRVLHGKNNKTIYSNFHQYDL-PVPELVRADNSRSPLRCPMY-------FDAVVCDPPYGIRAGARKSGRRERPDDDADAPPALTKSGKPKYGPREIPEEWLDTHFPVTQPYAAEDVMKDLLTFAATN--LRVGGRVVYLLPTTYDYTD--DDLPVHPLLRVVANSEEKLTSKYARRLITMEK 420
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A1V9ZRQ6_9STRA (tRNA guanosine-2'-O-methyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZRQ6_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.260e-18 Identity = 115/412 (27.91%), Postives = 179/412 (43.45%), Query Frame = 2 Query: 377 LPDPDAATAVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDG--SWCARVRHFGAGGGGKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEG-----------AAAGALLTRQLGAGFDF-NPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQ----LAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRA--------------------------------------NEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLLTYVKERDAASGEDVLPP 1444 LP + A ++ R + V+ ++ +W HG++Y + A ++A +DR A + + SW V FG K ++ RE + FA GP+ ++ P++T ++ D V E AGA R G D + L RRA++ T+MD E++ +M N A V GD V+DPF G+G +L+ A G G+ +G + D R+ + + + +NF Q + P+ LV D + + FDAV+ DPPYG RA N A P AA D + LL +A + LRVGGRVV PTT D D LP H LR+ + + + L++ AR L+T + + + + P Sbjct: 51 LPSVEHAKFLSQRGILVKGVYEIWGHGKNYDEVVA----SVANFEDRQAIVANEQLSWKINVEAFGL----KLSMEQQTE-RRERFRAILPFA-------GPVVMTNPSNTFLILE-DIGVDESLMTPHRIFFLRTIAGAERNRGRGGARDLVDMQTLKRRAYIGPTSMDAEMALLMCNMALVNKGDLVIDPFVGTGSVLVPCATFG-GICMGTDIDTRVLHGKNNKSIYSNFHQYNL-PVPELVRADNSRTPLKCPGY-------FDAVVCDPPYGIRAGARKSGRRERPDDPNTSLVSQTGKAKYGPRVIPEEWLHNHIPATQPYAAE-DVMNDLLTFAATN--LRVGGRVVYLLPTTYDYTD--DDLPVHPLLRVIANSEEKLTTKYARRLITMERVSECEAQVAIAKP 431
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A5J4YQ33_PORPP (tRNA (Guanine(10)-N2)-methyltransferase-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQ33_PORPP) HSP 1 Score: 97.8 bits (242), Expect = 6.150e-18 Identity = 107/382 (28.01%), Postives = 168/382 (43.98%), Query Frame = 2 Query: 404 VAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDGSWCARVRHFGAGGGGK-----YGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVG------------------EGAAAGALLTRQLG---AGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDA-VLDPFAGSGGLLLAAAALGAGVTVGIETDARLR----YHQ----------LAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARALTPQAAGLDAITALLRLSAASGVLRV-----------GGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLL 1393 VA R ++A++ V HG Y A +++D R A SW ++ G + +GR+++ ++ ++A FAP+L + PG ++L +P H L ++ F V E L R +G G + L R ++ TT+MD E++F+MAN A VR G + +LDPF G+G +L++A A GA +G + D R+ Y+Q + +NFEQ + ++ GD+ + Q+ G DA++TDPPYG R + + L R AS LRV GR+V + TAD V LP H A R+ S Q L+ + R L+ Sbjct: 124 VAQRAFLLKAVYEVIGHGNSYESACDAAVRTVSSDSARQAA----SWSDGMQELMKGASFRIDVQAFGRSVKQ---EQKAGLMARFAPVLLQFPGKVNLKSPQHRLMILEDAFPVAGHQQHSQLALNGEHLSVPEPDIRQVFLARLIGETQGGILSKKFRLPDRQYVGTTSMDAELAFIMANVALVRPGRSLILDPFCGTGSILISAVASGAHC-IGADIDPRVLRGYGYNQPEPQSHTSSGILSNFEQYGLERPAGILRGDLVHSYWQSPC-----GGWLDAIITDPPYGIRESIRTVDVEKTNDLQCKHVQHRRLRASDTLRVLIEFAADSLVDNGRLVFWLACTADF--VPEELPQHTAFRMVSYGEQQLTMRMHRRLV 490 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6188 ID=mRNA_6188|Name=jgi.p|Trimin1|349673|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1567bp|location=Sequence derived from alignment at Contig_47:134768..136864- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GCTGGCTCAGCCGCTGCTGCTGCTTGCGGGCCCGGAGGAGCAGAAGGATTback to top protein sequence of jgi.p|Trimin1|349673 >Trimin1|349673|estExt_Genemark1.C_Ctg_470018 ID=Trimin1|349673|estExt_Genemark1.C_Ctg_470018|Name=jgi.p|Trimin1|349673|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=491bp MRRKATAIAMLLGYCRAAVKALCLPAARPYSMLVHWRHGKAGGHDWFPSEback to top mRNA from alignment at Contig_47:134768..136864- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6188 ID=mRNA_6188|Name=jgi.p|Trimin1|349673|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2097bp|location=Sequence derived from alignment at Contig_47:134768..136864- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_47:134768..136864- >mRNA_6188 ID=mRNA_6188|Name=jgi.p|Trimin1|349673|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1473bp|location=Sequence derived from alignment at Contig_47:134768..136864- (Tribonema minus UTEX_B_3156 )back to top |