mRNA_6188 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349673
Unique NamemRNA_6188
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A836CDL2_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDL2_9STRA)

HSP 1 Score: 941 bits (2432), Expect = 0.000e+0
Identity = 490/490 (100.00%), Postives = 490/490 (100.00%), Query Frame = 2
Query:   95 MRRKATAIAMLLGYCRAAVKALCLPAARPYSMLVHWRHGKAGGHDWFPSEMRQAELLSVAETLGLDGRAITFTNAQRGGGADAEAVEALQFVHGLPDPDAATAVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDGSWCARVRHFGAGGGGKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAAAGALLTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQLAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLLTYVKERDAASGEDVLPPPAIALTAREEGGAPALGLVRGLADRVPAAAAAAVAPVSAG 1564
            MRRKATAIAMLLGYCRAAVKALCLPAARPYSMLVHWRHGKAGGHDWFPSEMRQAELLSVAETLGLDGRAITFTNAQRGGGADAEAVEALQFVHGLPDPDAATAVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDGSWCARVRHFGAGGGGKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAAAGALLTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQLAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLLTYVKERDAASGEDVLPPPAIALTAREEGGAPALGLVRGLADRVPAAAAAAVAPVSAG
Sbjct:    1 MRRKATAIAMLLGYCRAAVKALCLPAARPYSMLVHWRHGKAGGHDWFPSEMRQAELLSVAETLGLDGRAITFTNAQRGGGADAEAVEALQFVHGLPDPDAATAVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDGSWCARVRHFGAGGGGKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAAAGALLTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQLAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLLTYVKERDAASGEDVLPPPAIALTAREEGGAPALGLVRGLADRVPAAAAAAVAPVSAG 490          
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A7S3Q840_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q840_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.010e-23
Identity = 109/349 (31.23%), Postives = 163/349 (46.70%), Query Frame = 2
Query:  413 RCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDGS-----WCARVRHFGAGGGGK------YGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAAAGALLTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVT-VGIET--DARLRYHQLAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARALTPQAAGLDAITALLRLSA-ASGVLRVGGRVVCFAPTTADCGDVAPHLPS-----HAALRLESAARQPLSSALARWLLTY 1399
            R   VR+L  + A G  Y +    A TA+A+++       +GS     W   +R +G  G  K      YG+ MRSP  +EE   +     L     GP+ L  P  +LY+  G    G       LLTR    G + +  A + R  ++ TT+    +F M N A+V+ G  + DPF GS  +LLAA+ +   V  VG+E   + ++    +  +F    +    A++ GD  S + + AA  A G  PFDA++TDPPYG R      + P    L    A  R       +LR+GGR+V F P   +  D+A  +PS     +A L       QPL+ +L+RWL+ Y
Sbjct:  199 RSALVRSLFEIVAEGDSYPEL---AQTALASNNLNDMMTSNGSHSKDTWRVSMRQYG--GEAKIEKQKQYGKKMRSPM-QEELRAINQMEKLFIEFTGPVDLKDPDISLYLFEGLKGKGRKKILARLLTR----GANTSAIAPNTRICVTNTTLCPLAAFTMCNVARVKPGYRIFDPFCGSCAILLAASMIEPSVKIVGVEIAHNGQVNRDNVVKDFTSRNLTLPAAIIRGDSMSEDVRKAARIAVGDEPFDAIITDPPYGIRETSEFCVDPPLINLVRCIAKDRARGDGQRLLRLGGRLVAFVPNQ-EGDDIAADMPSIEDLAYAGLEFIKMFEQPLNDSLSRWLVEY 536          
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A2V3J5P2_9FLOR (tRNA (Guanine(10)-N2)-methyltransferase-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5P2_9FLOR)

HSP 1 Score: 110 bits (276), Expect = 1.980e-22
Identity = 131/407 (32.19%), Postives = 185/407 (45.45%), Query Frame = 2
Query:  305 TFTNAQRGGGADAEAVEALQFVHGLPDPDAATAVAARCVCVRALHHVWAHGQDYADC-GARASTAIAADDDRVARMGDGSWCARVRHFGAGGGGKYGRAMRSPPHREEHAVLAH-FAPLLTRVPGPISLSAPAHTLYVMSGDFDV-GEGAAAG----ALLTRQLGAGFDF--NPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQLA---ANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRA----------------NEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLLTYV----KERDAASGE 1429
            T TN +RG        E + F   L D   A A+A+RCV +RA++    HG  Y  C G+  S A     D +A +         R F    G KY          E+     H F+ +L   PG + +    H L+++   F V G G   G        R++  G     + Y+L RR ++  T+MD E+SFVMAN A VR  D V DPF G+GG++LA AA GA V  G      LR    A   ANF+Q  V      +  D+ ++      +    G  FDAV+ DPPYG +                 N  +  T +   +D +   L  +A+  VL  GGR+V + PTT D    A  +P++AALRL     QPL+S ++R ++T V    KER+    E
Sbjct:   50 TPTNPKRGPAGSVIYGE-IFFFADLKDVAEARALASRCVLLRAIYITCGHGDSYEQCIGSIDSPAF---KDTLAPLRCEKTKPSFRCFVEAFGRKYSV--------EQQLERIHKFSEVLRPFPGVVRMKDADHQLWILEDAFPVQGHGTPHGKPRQVFFARKVADGQKHLGSKYSLKRRRYIGPTSMDAELSFVMANMAHVRKDDLVNDPFCGTGGIMLACAARGAHVIGGDINILALRGKGEATIDANFDQYEVPRPLGNIRADVLNSP-----IVERPGGVFDAVVCDPPYGIKEGMKVFREDFVDASLQRNHFQG-TQRVRFVDFLAGFLEYAAS--VLVPGGRLVYWLPTTTDY--TAEDVPTNAALRLVGNCEQPLTSRMSRRMITMVRLSEKEREHNESE 434          
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: B7G1Y7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G1Y7_PHATC)

HSP 1 Score: 107 bits (268), Expect = 1.850e-21
Identity = 125/436 (28.67%), Postives = 201/436 (46.10%), Query Frame = 2
Query:  191 LVHWRHGKAGGHDWFPSEMRQAE----LLSVAETLGLDGRAITFTNA-QRGGGADAEAVE------ALQFVHGLP---DPDAATAVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDGS------WCARVRHFGAG----GGGKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAAAGALLTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGV-TVGIET--DARLRYHQLAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKR-ANEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTAD--CGDVAP--HLPSHAALRLESAARQPLSSALARWLLTYV 1402
            ++HW   K  G D +  + R  E    L +V ET  +D   + F +A    G  + +A +      A+Q++H +P      +    A RC  + AL+ + +    Y      AS+AI   ++    M  GS      WC RVR FG         +YG   RS    +E   L    PLL +  G ++L++P   +Y+  G     +      +L R++ +G      A + R  ++ T +    +F++ N A +R   ++LDP+ GSG +LLAAA +     +VGIE   +  +    +  +F+   +    AL+HGD  +   +  A +A G   FD ++TDPPYG R ++    LTP      +I     L     +L+ GGR+VCF P   D    DV P       A L+ E    QPL+ +L+RWL++Y+
Sbjct:   44 IIHW---KGEGVDGYSLQFRHLEFRGALSAVLETSVVD---VAFEDALDYTGSVELQASKLVQFNSAMQYIH-IPRNIHRKSLVEAAERCSLIHALYDIVSASDAYPPL---ASSAI--QNNGFGDMYSGSQNEEATWCVRVRRFGQSLCSEKEKRYGARARSMKLEKE--ALKALEPLLLQFGGKVNLNSPDCKIYIFDGLVRTDK------VLARRITSGPRVFAIAPNTRICVTNTPLCPVAAFLLCNVAGIRKIVSILDPYVGSGAILLAAAMIQPSCRSVGIEIADNGYVNRDDILLDFDTRNLTRPLALLHGDSTNELMREEAKKAIGNDAFDLIITDPPYGIRESSNYNTLTPAEELFQSIAKDRDLG--RRLLKKGGRLVCFVPCNEDENLEDVLPSREQAESAGLQCEVVREQPLNDSLSRWLVSYL 457          
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A7S3V5S7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5S7_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.560e-20
Identity = 118/444 (26.58%), Postives = 193/444 (43.47%), Query Frame = 2
Query:  191 LVHWRHGKAGGHDWFPSEMRQAELLSVAETLGLD--------------GRAITFTNAQRGGGADAEAVE-ALQFV--------HGLPD----PDAATAVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDD-RVARMGDGSWCARVRHFGAGGG----GKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAAAGALLTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGV-TVGIET--DARLRYHQLAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHA-----ALRLESAARQPLSSALARWLLTYV 1402
            ++HWR  K+ G+       RQ E  S  E+  LD                +  F  A+     +  A E ALQ+V        + L D     D       RC  +R+L  + A G  + D       +   DD  +  +  + +W  R+R +G+        +YG+ MRSP   +E A +     L  +  G + L      LY+  G    GE      ++ R +  G + +  A   R  ++ T +    +F M N A++R G  +LDP+AGS  +LLAAA +   V +VGIE   + ++    +  +FE   +    A++ GD +  + +  A+ +    PFD ++TDPPYG R      + P    +    +  R +  + +L+ GGR+V F P      D+   +PS A      LR      QPL+ +L+RWL+ Y+
Sbjct:   71 MIHWRGEKSHGNSL---NFRQLEFTSAFESSVLDPDSDIVSASVKFSPSLSSNFEAAKEMTNYEVHAYENALQYVSIRNYEADNNLTDIITSNDVLIRSVKRCSLIRSLFEIVADGDTFEDLAHNTIMSGHLDDMMQGGKNSESTWAVRLRQYGSSSKPEKQAQYGKKMRSPMS-QEIAAIDEMKDLFIKFTGAVDLKDADINLYLFEGLG--GEKYNGRKVIARLMTRGANTSSIAPKTRICVTNTPLCPLAAFTMCNVARIRPGLRILDPYAGSCAILLAAAMIEPSVKSVGIEIAHNGQVNRDDIMKDFESRNLALPAAIIRGDSSQDKVRREAMESVENKPFDLIITDPPYGIREKTGFCVDPPVVSVVKCISEDRRNG-NRLLKKGGRLVAFVPNQHG-DDIQLDMPSDADLQKAGLRFCQMLEQPLNDSLSRWLVEYL 506          
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A8J5XWK4_DIALT (UPF0020 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XWK4_DIALT)

HSP 1 Score: 103 bits (257), Expect = 6.990e-20
Identity = 145/474 (30.59%), Postives = 205/474 (43.25%), Query Frame = 2
Query:  179 PYSMLVHWRHGKAGGHDWFPSEMRQAELLSVAETLGLD---------------GRAITFTNAQRGGGADAEAVEALQFVHGLPDPDAATAVAARCVCVRALHHVWAHGQDY----ADCGARASTAIAA--DDDRVARMGDGSWCARVRHFGAGGGGKYGRAMRSPPHREEHAVL-AHFAPLLTRVPGPISLSAPAHTLYV-----MSG---DFDVGEGAAAGALLTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQ-----LAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPF-DAVLTDPPYGKRANEARALTPQAAGL-------------------DAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLLTYVKERDAASGEDV 1435
            PY  LVH+ H       W     R  EL +VA+ +G++                R +    A+R    +AEA E    V  L   D A  +A+R V V+++  +W  G+ +    A C A A   I     +DR  R+       RV  FG     KY         R+  A++  H A L   + G + L  P +T+ V     MSG         G   G  + R  G     + + L  R FL  T++DH++S V+AN A  R G  VLDPF G+  +L+  AA GA V +G + DAR    +     + ANF Q    P   L+  D ++A      +      PF DA++ DPPYG RA+  + L   A+ L                     + ALL  +A+   L +GGR+V   PTT D    A   P H AL L + + QP+SS   R L+T VK R+ A G  V
Sbjct:    3 PY--LVHFTH------KWLA--FRVPELEAVAQLMGIELALDDESAREELRQERRGVIGDPARR---REAEARERADVVVHLRSDDDARRLASRLVLVQSIVALWGSGRTWDEVLARCAASAHERIEPYLTEDRTFRV-------RVEAFGC----KY-------QTRDAVALMQTHLARL--ELKGTVRLKKPDNTVLVYVDHGMSGMPTPATPPRGIHVGRRIARAPGLSHA-DKFRLPDRRFLGPTSLDHQLSMVIANQAHARPGALVLDPFCGTASILVGCAAFGARV-LGADLDARNLVGKGEGRTIWANFAQYGFAPPLGLLRADFSAASTCWRHV------PFLDAIVCDPPYGVRASSKK-LADGASDLLHEPGHEEHVPMRERLNIEPLLDALLAFAASR--LVIGGRLVFLLPTTTDMRGSA--APEHPALELRAESEQPISSRWCRRLVTMVKVRECAPGMHV 430          
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A4D9D5F5_9STRA (Peptidase_M3 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5F5_9STRA)

HSP 1 Score: 104 bits (260), Expect = 7.630e-20
Identity = 122/390 (31.28%), Postives = 175/390 (44.87%), Query Frame = 2
Query:  293 GRAITFTNAQRGGGADAEAVEALQFVHGLPDPDAAT-AVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARM-GDGSWCARVRHFGAGGGGKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAAAGAL-LTRQLGAGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQLAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCG--DVAPHLPSHAALRLESAARQPLS--------SALARWLLTYVKERDAAS 1423
            GR     N  +GGG  + +   L +VHGLPD      A+    V V A + VWA    +++C A  +T +  +D R++ +  + SW A    F A    K GR        ++   + HF   L +VPGP+ L +P   L ++  D D   GA    + LTR++  G       L  R  L                         L P  G    LLAAA LGA VTVG++ +A +   ++A NF    + P    + G     + QA  LR  G  PFD ++ DPPYGKR  E   +  +    +AI  L  L++   +LRVGGR+V F P        D+ P LP+H +L + S +RQPL+        S   RW L  V ++ A S
Sbjct:  140 GRRKADKNEGKGGGCSSSS---LVYVHGLPDDGKVMQAIVQSAVLVHAAYAVWACASAFSEC-ADVATRMLLEDARLSSLRANASWAAESYVFSA----KSGRRKDVALLPQKLYEMRHF---LRQVPGPVDLKSPDVRLVLLE-DGDAEAGARPHQVWLTREIARG----SRGLTERLSLRRRP---------------------LRPDGGXXXXLLAAAQLGAQVTVGVDVNASIDIGRVADNFRVLGLRPPEDFLFGRADDPKVQAG-LRRWG--PFDVLVVDPPYGKR--EKGPVRAEGVIQEAIYTLYELASKDEILRVGGRLVFFLPMDPRWASRDIIPLLPTHPSLVIVSISRQPLNTRPVMSRASVYRRWRLLSVGDKYAPS 487          
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: T0SIC9_SAPDV (UPF0020 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SIC9_SAPDV)

HSP 1 Score: 99.0 bits (245), Expect = 1.670e-18
Identity = 115/400 (28.75%), Postives = 174/400 (43.50%), Query Frame = 2
Query:  377 LPDPDAATAVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDGS--WCARVRHFGAGGGGKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEGAA-----------AGALLTRQLGAGFDF-NPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQ----LAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARA---------------------------------------LTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLLTYVK 1405
            LP    A  ++ R + V+ ++ +W HG+ Y +  A    ++AA ++R   + D S  W   V  FG     K     ++   RE    +  F        GP+ LS P++T  ++  D  V E A            AGA   R  G   D  +   L RRA++  T+MD E++ +M N A V  GD V+DPF G+G +L+  A  G G+ +G + D R+ + +    + +NF Q  + P+  LV  D + +  +           FDAV+ DPPYG RA   ++                                       +T   A  D +  LL  +A +  LRVGGRVV   PTT D  D    LP H  LR+ + + + L+S  AR L+T  K
Sbjct:   51 LPSEAHAKFLSQRGILVKGVYEIWGHGKTYDEVVA----SVAAFEERTTYVEDASLSWKINVDAFGL----KLSMEQQTA-RRERFREILPFQ-------GPVVLSNPSNTFLILE-DIGVDEAAMTPQRIFFLRTLAGAERNRGRGGARDLVDMQTLKRRAYIGPTSMDAEMALLMCNMALVMPGDLVIDPFVGTGSVLVPCATFG-GICMGTDIDTRVLHGKNNKTIYSNFHQYDL-PVPELVRADNSRSPLRCPMY-------FDAVVCDPPYGIRAGARKSGRRERPDDDADAPPALTKSGKPKYGPREIPEEWLDTHFPVTQPYAAEDVMKDLLTFAATN--LRVGGRVVYLLPTTYDYTD--DDLPVHPLLRVVANSEEKLTSKYARRLITMEK 420          
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A1V9ZRQ6_9STRA (tRNA guanosine-2'-O-methyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZRQ6_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.260e-18
Identity = 115/412 (27.91%), Postives = 179/412 (43.45%), Query Frame = 2
Query:  377 LPDPDAATAVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDG--SWCARVRHFGAGGGGKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVGEG-----------AAAGALLTRQLGAGFDF-NPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARLRYHQ----LAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRA--------------------------------------NEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLLTYVKERDAASGEDVLPP 1444
            LP  + A  ++ R + V+ ++ +W HG++Y +  A    ++A  +DR A + +   SW   V  FG     K     ++   RE    +  FA       GP+ ++ P++T  ++  D  V E              AGA   R  G   D  +   L RRA++  T+MD E++ +M N A V  GD V+DPF G+G +L+  A  G G+ +G + D R+ + +    + +NF Q  + P+  LV  D +    +           FDAV+ DPPYG RA                                      N   A  P AA  D +  LL  +A +  LRVGGRVV   PTT D  D    LP H  LR+ + + + L++  AR L+T  +  +  +   +  P
Sbjct:   51 LPSVEHAKFLSQRGILVKGVYEIWGHGKNYDEVVA----SVANFEDRQAIVANEQLSWKINVEAFGL----KLSMEQQTE-RRERFRAILPFA-------GPVVMTNPSNTFLILE-DIGVDESLMTPHRIFFLRTIAGAERNRGRGGARDLVDMQTLKRRAYIGPTSMDAEMALLMCNMALVNKGDLVIDPFVGTGSVLVPCATFG-GICMGTDIDTRVLHGKNNKSIYSNFHQYNL-PVPELVRADNSRTPLKCPGY-------FDAVVCDPPYGIRAGARKSGRRERPDDPNTSLVSQTGKAKYGPRVIPEEWLHNHIPATQPYAAE-DVMNDLLTFAATN--LRVGGRVVYLLPTTYDYTD--DDLPVHPLLRVIANSEEKLTTKYARRLITMERVSECEAQVAIAKP 431          
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Match: A0A5J4YQ33_PORPP (tRNA (Guanine(10)-N2)-methyltransferase-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQ33_PORPP)

HSP 1 Score: 97.8 bits (242), Expect = 6.150e-18
Identity = 107/382 (28.01%), Postives = 168/382 (43.98%), Query Frame = 2
Query:  404 VAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDGSWCARVRHFGAGGGGK-----YGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAPAHTLYVMSGDFDVG------------------EGAAAGALLTRQLG---AGFDFNPYALDRRAFLSTTTMDHEVSFVMANHAQVRAGDA-VLDPFAGSGGLLLAAAALGAGVTVGIETDARLR----YHQ----------LAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDPPYGKRANEARALTPQAAGLDAITALLRLSAASGVLRV-----------GGRVVCFAPTTADCGDVAPHLPSHAALRLESAARQPLSSALARWLL 1393
            VA R   ++A++ V  HG  Y      A   +++D  R A     SW   ++    G   +     +GR+++     ++  ++A FAP+L + PG ++L +P H L ++   F V                   E       L R +G    G     + L  R ++ TT+MD E++F+MAN A VR G + +LDPF G+G +L++A A GA   +G + D R+     Y+Q          + +NFEQ  +     ++ GD+  +  Q+       G   DA++TDPPYG R +       +   L       R   AS  LRV            GR+V +   TAD   V   LP H A R+ S   Q L+  + R L+
Sbjct:  124 VAQRAFLLKAVYEVIGHGNSYESACDAAVRTVSSDSARQAA----SWSDGMQELMKGASFRIDVQAFGRSVKQ---EQKAGLMARFAPVLLQFPGKVNLKSPQHRLMILEDAFPVAGHQQHSQLALNGEHLSVPEPDIRQVFLARLIGETQGGILSKKFRLPDRQYVGTTSMDAELAFIMANVALVRPGRSLILDPFCGTGSILISAVASGAHC-IGADIDPRVLRGYGYNQPEPQSHTSSGILSNFEQYGLERPAGILRGDLVHSYWQSPC-----GGWLDAIITDPPYGIRESIRTVDVEKTNDLQCKHVQHRRLRASDTLRVLIEFAADSLVDNGRLVFWLACTADF--VPEELPQHTAFRMVSYGEQQLTMRMHRRLV 490          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349673 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CDL2_9STRA0.000e+0100.00S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7S3Q840_9STRA2.010e-2331.23Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A2V3J5P2_9FLOR1.980e-2232.19tRNA (Guanine(10)-N2)-methyltransferase-like n=1 T... [more]
B7G1Y7_PHATC1.850e-2128.67Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S3V5S7_9STRA1.560e-2026.58Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A8J5XWK4_DIALT6.990e-2030.59UPF0020 domain-containing protein n=1 Tax=Diacrone... [more]
A0A4D9D5F5_9STRA7.630e-2031.28Peptidase_M3 domain-containing protein n=1 Tax=Nan... [more]
T0SIC9_SAPDV1.670e-1828.75UPF0020 domain-containing protein n=1 Tax=Saproleg... [more]
A0A1V9ZRQ6_9STRA2.260e-1827.91tRNA guanosine-2'-O-methyltransferase n=1 Tax=Thra... [more]
A0A5J4YQ33_PORPP6.150e-1828.01tRNA (Guanine(10)-N2)-methyltransferase-like n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_47contigContig_47:134768..136864 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349673|estExt_Genemark1.C_Ctg_470018
BRITEko00000,ko01000,ko03016
KEGG koko:K15430
EC2.1.1.214
DescriptiontRNA binding
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1041@1|root,KOG2671@2759|Eukaryota
Evalue3.96e-36
Seed ortholog2903.EOD07883
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-08_004210.2
TranscriptId349995
TrackFilteredModels1
ProteinId349673
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349673gene_6188Tribonema minus UTEX_B_3156 geneContig_47 134768..136864 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349673Trimin1|349673|estExt_Genemark1.C_Ctg_470018Tribonema minus UTEX_B_3156 polypeptideContig_47 134768..136770 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6188_2exon_6188_2Tribonema minus UTEX_B_3156 exonContig_47 134768..136113 -
exon_6188_1exon_6188_1Tribonema minus UTEX_B_3156 exonContig_47 136644..136864 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6188CDS_6188Tribonema minus UTEX_B_3156 CDSContig_47 136644..136770 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_6188UTR5_6188Tribonema minus UTEX_B_3156 five_prime_UTRContig_47 136771..136864 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6188 ID=mRNA_6188|Name=jgi.p|Trimin1|349673|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1567bp|location=Sequence derived from alignment at Contig_47:134768..136864- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCTGGCTCAGCCGCTGCTGCTGCTTGCGGGCCCGGAGGAGCAGAAGGATT
CAAGTAGGAACTGGACTGCTGTGTTGTGGGTGCGGGGCTCGGTGATGAGG
CGGAAGGCGACTGCCATTGCGATGCTGCTTGGCTACTGTCGAGCGGCTGT
GAAGGCACTGTGCTTGCCAGCGGCGCGCCCATATTCAATGCTGGTGCACT
GGAGACATGGAAAGGCTGGCGGCCACGACTGGTTCCCCTCCGAGATGCGC
CAAGCGGAGCTCCTCTCCGTCGCCGAAACCCTCGGCCTGGACGGCCGCGC
CATCACCTTCACCAACGCTCAGCGCGGCGGCGGCGCCGACGCCGAGGCCG
TGGAGGCCCTGCAGTTCGTCCACGGCCTGCCCGACCCGGACGCCGCGACC
GCCGTCGCCGCGCGTTGCGTGTGCGTGCGCGCGCTGCACCACGTGTGGGC
GCACGGCCAAGACTACGCGGACTGCGGCGCGCGCGCGTCCACCGCCATCG
CCGCCGACGACGACAGGGTGGCGCGCATGGGCGACGGCAGCTGGTGCGCG
CGCGTGCGCCACTTCGGCGCCGGCGGCGGCGGCAAGTACGGGCGCGCCAT
GCGCTCGCCGCCGCACCGCGAGGAGCATGCCGTGCTGGCGCACTTTGCGC
CGCTGCTGACGCGCGTGCCCGGCCCCATCAGCCTGTCCGCCCCCGCGCAC
ACGCTGTACGTCATGAGCGGGGACTTCGATGTGGGGGAGGGGGCGGCGGC
GGGGGCGCTGCTGACGCGCCAGCTCGGCGCCGGCTTCGACTTCAACCCGT
ACGCCCTCGACAGGCGCGCATTCCTCAGCACCACCACCATGGACCACGAG
GTCAGCTTCGTCATGGCGAACCACGCGCAGGTACGCGCGGGGGACGCGGT
GTTGGACCCTTTCGCGGGGTCGGGGGGGCTGCTGCTTGCGGCGGCAGCGC
TCGGCGCGGGGGTTACCGTGGGCATCGAAACCGACGCGCGGCTGCGCTAC
CACCAGCTCGCCGCCAACTTTGAGCAGGCGCGCGTGGTGCCGCTGACGGC
GCTGGTGCACGGCGACATGGCGAGCGCGGAGGCGCAGGCGGCGGCGCTGC
GGGCGAACGGCGGCGCGCCCTTCGACGCCGTGCTCACCGACCCGCCGTAC
GGCAAGCGCGCCAACGAGGCGCGCGCGCTCACGCCGCAGGCCGCCGGCCT
CGACGCCATCACGGCGCTGCTGCGGCTGAGCGCTGCCTCGGGCGTGCTGC
GCGTCGGCGGCCGCGTCGTGTGCTTCGCGCCGACCACCGCGGACTGCGGC
GACGTCGCGCCACACCTGCCGTCGCACGCCGCGCTGCGCCTGGAGAGCGC
CGCGCGCCAGCCGCTCAGCAGCGCGCTCGCGCGGTGGCTGCTGACGTACG
TGAAGGAGCGCGACGCGGCGTCGGGCGAGGACGTGCTGCCGCCGCCCGCC
ATTGCGCTTACGGCGCGGGAGGAGGGGGGGGCACCGGCCCTGGGCTTGGT
CAGGGGGCTGGCGGACCGTGTGCCGGCGGCAGCGGCAGCGGCGGTGGCGC
CTGTGAGCGCTGGCTAG
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protein sequence of jgi.p|Trimin1|349673

>Trimin1|349673|estExt_Genemark1.C_Ctg_470018 ID=Trimin1|349673|estExt_Genemark1.C_Ctg_470018|Name=jgi.p|Trimin1|349673|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=491bp
MRRKATAIAMLLGYCRAAVKALCLPAARPYSMLVHWRHGKAGGHDWFPSE
MRQAELLSVAETLGLDGRAITFTNAQRGGGADAEAVEALQFVHGLPDPDA
ATAVAARCVCVRALHHVWAHGQDYADCGARASTAIAADDDRVARMGDGSW
CARVRHFGAGGGGKYGRAMRSPPHREEHAVLAHFAPLLTRVPGPISLSAP
AHTLYVMSGDFDVGEGAAAGALLTRQLGAGFDFNPYALDRRAFLSTTTMD
HEVSFVMANHAQVRAGDAVLDPFAGSGGLLLAAAALGAGVTVGIETDARL
RYHQLAANFEQARVVPLTALVHGDMASAEAQAAALRANGGAPFDAVLTDP
PYGKRANEARALTPQAAGLDAITALLRLSAASGVLRVGGRVVCFAPTTAD
CGDVAPHLPSHAALRLESAARQPLSSALARWLLTYVKERDAASGEDVLPP
PAIALTAREEGGAPALGLVRGLADRVPAAAAAAVAPVSAG*
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mRNA from alignment at Contig_47:134768..136864-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6188 ID=mRNA_6188|Name=jgi.p|Trimin1|349673|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2097bp|location=Sequence derived from alignment at Contig_47:134768..136864- (Tribonema minus UTEX_B_3156 )
GCTGGCTCAGCCGCTGCTGCTGCTTGCGGGCCCGGAGGAGCAGAAGGATT CAAGTAGGAACTGGACTGCTGTGTTGTGGGTGCGGGGCTCGGTGATGAGG CGGAAGGCGACTGCCATTGCGATGCTGCTTGGCTACTGTCGAGCGGCTGT GAAGGCACTGTGCTTGCCAGCGGCGCGCCCATATTCAATGCTGGTGCACT GGAGACATGGAAAGGCTGGCGGTGAGTGTAATGACCACAGCAGTCCTCAT TCAAGCTATCCTAGGTCCGTATGGTTCACTCGTAACATGTGCTGGTGCGC TGTAAGTCGCAAACTTGAACGCCTGAGAAGCACGCGCCGTGACTGGAGGC ACCGTCCCAGTCGCTGTGGCCATCTTGATGAGTGTACGATATACTTTATG ACATTGAAACTGGTCATACGCCCGTCAGGTTTCAAATAACTGCATTTGCT TCAAATGTACAGTGTGTGCCACAGTGGTAGAAGTATGATTTTTTGCGTCC TGCAAACACTTGCACAGCATGAACTTCACGCAGCAAGATGTGAATCTGTG CACAGTGCATTCGCACAGATTACATACGGGATGGCATGTACTGAGAATGG TCTCGCCTCTTCACTTTCAAAGTACAATATTCACAATGTCCTGTTCTTCT GCCTCAAGAGCTGTGATGCCTTCCGCCAGCAGCGCTGTACGTGAACTCGG CCCATACCAGCGTTCTCATGCACACTCCCCCTTCGCTGCGCATGCGCGCA GGCCACGACTGGTTCCCCTCCGAGATGCGCCAAGCGGAGCTCCTCTCCGT CGCCGAAACCCTCGGCCTGGACGGCCGCGCCATCACCTTCACCAACGCTC AGCGCGGCGGCGGCGCCGACGCCGAGGCCGTGGAGGCCCTGCAGTTCGTC CACGGCCTGCCCGACCCGGACGCCGCGACCGCCGTCGCCGCGCGTTGCGT GTGCGTGCGCGCGCTGCACCACGTGTGGGCGCACGGCCAAGACTACGCGG ACTGCGGCGCGCGCGCGTCCACCGCCATCGCCGCCGACGACGACAGGGTG GCGCGCATGGGCGACGGCAGCTGGTGCGCGCGCGTGCGCCACTTCGGCGC CGGCGGCGGCGGCAAGTACGGGCGCGCCATGCGCTCGCCGCCGCACCGCG AGGAGCATGCCGTGCTGGCGCACTTTGCGCCGCTGCTGACGCGCGTGCCC GGCCCCATCAGCCTGTCCGCCCCCGCGCACACGCTGTACGTCATGAGCGG GGACTTCGATGTGGGGGAGGGGGCGGCGGCGGGGGCGCTGCTGACGCGCC AGCTCGGCGCCGGCTTCGACTTCAACCCGTACGCCCTCGACAGGCGCGCA TTCCTCAGCACCACCACCATGGACCACGAGGTCAGCTTCGTCATGGCGAA CCACGCGCAGGTACGCGCGGGGGACGCGGTGTTGGACCCTTTCGCGGGGT CGGGGGGGCTGCTGCTTGCGGCGGCAGCGCTCGGCGCGGGGGTTACCGTG GGCATCGAAACCGACGCGCGGCTGCGCTACCACCAGCTCGCCGCCAACTT TGAGCAGGCGCGCGTGGTGCCGCTGACGGCGCTGGTGCACGGCGACATGG CGAGCGCGGAGGCGCAGGCGGCGGCGCTGCGGGCGAACGGCGGCGCGCCC TTCGACGCCGTGCTCACCGACCCGCCGTACGGCAAGCGCGCCAACGAGGC GCGCGCGCTCACGCCGCAGGCCGCCGGCCTCGACGCCATCACGGCGCTGC TGCGGCTGAGCGCTGCCTCGGGCGTGCTGCGCGTCGGCGGCCGCGTCGTG TGCTTCGCGCCGACCACCGCGGACTGCGGCGACGTCGCGCCACACCTGCC GTCGCACGCCGCGCTGCGCCTGGAGAGCGCCGCGCGCCAGCCGCTCAGCA GCGCGCTCGCGCGGTGGCTGCTGACGTACGTGAAGGAGCGCGACGCGGCG TCGGGCGAGGACGTGCTGCCGCCGCCCGCCATTGCGCTTACGGCGCGGGA GGAGGGGGGGGCACCGGCCCTGGGCTTGGTCAGGGGGCTGGCGGACCGTG TGCCGGCGGCAGCGGCAGCGGCGGTGGCGCCTGTGAGCGCTGGCTAG
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Coding sequence (CDS) from alignment at Contig_47:134768..136864-

>mRNA_6188 ID=mRNA_6188|Name=jgi.p|Trimin1|349673|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1473bp|location=Sequence derived from alignment at Contig_47:134768..136864- (Tribonema minus UTEX_B_3156 )
ATGAGGCGGAAGGCGACTGCCATTGCGATGCTGCTTGGCTACTGTCGAGC
GGCTGTGAAGGCACTGTGCTTGCCAGCGGCGCGCCCATATTCAATGCTGG
TGCACTGGAGACATGGAAAGGCTGGCGGCCACGACTGGTTCCCCTCCGAG
ATGCGCCAAGCGGAGCTCCTCTCCGTCGCCGAAACCCTCGGCCTGGACGG
CCGCGCCATCACCTTCACCAACGCTCAGCGCGGCGGCGGCGCCGACGCCG
AGGCCGTGGAGGCCCTGCAGTTCGTCCACGGCCTGCCCGACCCGGACGCC
GCGACCGCCGTCGCCGCGCGTTGCGTGTGCGTGCGCGCGCTGCACCACGT
GTGGGCGCACGGCCAAGACTACGCGGACTGCGGCGCGCGCGCGTCCACCG
CCATCGCCGCCGACGACGACAGGGTGGCGCGCATGGGCGACGGCAGCTGG
TGCGCGCGCGTGCGCCACTTCGGCGCCGGCGGCGGCGGCAAGTACGGGCG
CGCCATGCGCTCGCCGCCGCACCGCGAGGAGCATGCCGTGCTGGCGCACT
TTGCGCCGCTGCTGACGCGCGTGCCCGGCCCCATCAGCCTGTCCGCCCCC
GCGCACACGCTGTACGTCATGAGCGGGGACTTCGATGTGGGGGAGGGGGC
GGCGGCGGGGGCGCTGCTGACGCGCCAGCTCGGCGCCGGCTTCGACTTCA
ACCCGTACGCCCTCGACAGGCGCGCATTCCTCAGCACCACCACCATGGAC
CACGAGGTCAGCTTCGTCATGGCGAACCACGCGCAGGTACGCGCGGGGGA
CGCGGTGTTGGACCCTTTCGCGGGGTCGGGGGGGCTGCTGCTTGCGGCGG
CAGCGCTCGGCGCGGGGGTTACCGTGGGCATCGAAACCGACGCGCGGCTG
CGCTACCACCAGCTCGCCGCCAACTTTGAGCAGGCGCGCGTGGTGCCGCT
GACGGCGCTGGTGCACGGCGACATGGCGAGCGCGGAGGCGCAGGCGGCGG
CGCTGCGGGCGAACGGCGGCGCGCCCTTCGACGCCGTGCTCACCGACCCG
CCGTACGGCAAGCGCGCCAACGAGGCGCGCGCGCTCACGCCGCAGGCCGC
CGGCCTCGACGCCATCACGGCGCTGCTGCGGCTGAGCGCTGCCTCGGGCG
TGCTGCGCGTCGGCGGCCGCGTCGTGTGCTTCGCGCCGACCACCGCGGAC
TGCGGCGACGTCGCGCCACACCTGCCGTCGCACGCCGCGCTGCGCCTGGA
GAGCGCCGCGCGCCAGCCGCTCAGCAGCGCGCTCGCGCGGTGGCTGCTGA
CGTACGTGAAGGAGCGCGACGCGGCGTCGGGCGAGGACGTGCTGCCGCCG
CCCGCCATTGCGCTTACGGCGCGGGAGGAGGGGGGGGCACCGGCCCTGGG
CTTGGTCAGGGGGCTGGCGGACCGTGTGCCGGCGGCAGCGGCAGCGGCGG
TGGCGCCTGTGAGCGCTGGCTAG
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