mRNA_6145 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349577
Unique Name	mRNA_6145
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|349577 vs. uniprot
Match: A0A835YVY6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVY6_9STRA)

HSP 1 Score: 1237 bits (3200), Expect = 0.000e+0
Identity = 758/758 (100.00%), Postives = 758/758 (100.00%), Query Frame = 1

Query:    1 MAAKASQAQLSVLHAKVLALRPVCQVVSALATSGSSCQLAKPTAGMRTTTGQARPQNFAWNVDHGNSSGCDEDNDGLESGYGSDVENQDWKQVWSERFKKGPLRTDYQAHFSWPPATAYSSPVKPPGAPPXXXXXXXXXKTAFAHARAGAAARSLDQHDASSIRGQRVRPQGSVADVPSSALRGATAGXXXXXXXXXXDGDVEEQRGEAGDAHLTPLPARAWGGAAGEGAAAAAAAPEQAVRQKGAGDPTARQDNVAYLLGEEGARPPPSPARSGRAEAAQPERDDVRQLLDDWSQRASPLHTGRREPLQRAARAKRHGTDGRPLHDGGPQRSAMYTAQGERACATSCPGGAHGEREEDSVGALLHARARLPPXXXXXXXTQLGAFAASVDRAQAAVKGRDLAVLCALPRPPAAVRALVHGVVSLLAPHVRMRWEELRTHVLRNGYNFARLLDGFNKDAPAVTPAALAFTTQRWAQPDFISGIATAARGLATWLQALHAYAAYKAGPTAALPLPPPMRAAPQPLTPAAAXXGNAAAARGVRPVMTADAARRLAQEXXXXXXXXXXXXXSAVPAAGGPMAATPQHSVAGSSRMSAYGRGTPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAAAVRARIQAAASVAGEEFAESVCGAGSVVDPSVLSQSGWRGSHGGSGAFEALKLARRRNELARKNAARAAARAEDLRNPLLANVRYPVVRTRPQTEYMARYRWVDC 2274
            MAAKASQAQLSVLHAKVLALRPVCQVVSALATSGSSCQLAKPTAGMRTTTGQARPQNFAWNVDHGNSSGCDEDNDGLESGYGSDVENQDWKQVWSERFKKGPLRTDYQAHFSWPPATAYSSPVKPPGAPPXXXXXXXXXKTAFAHARAGAAARSLDQHDASSIRGQRVRPQGSVADVPSSALRGATAGXXXXXXXXXXDGDVEEQRGEAGDAHLTPLPARAWGGAAGEGAAAAAAAPEQAVRQKGAGDPTARQDNVAYLLGEEGARPPPSPARSGRAEAAQPERDDVRQLLDDWSQRASPLHTGRREPLQRAARAKRHGTDGRPLHDGGPQRSAMYTAQGERACATSCPGGAHGEREEDSVGALLHARARLPPXXXXXXXTQLGAFAASVDRAQAAVKGRDLAVLCALPRPPAAVRALVHGVVSLLAPHVRMRWEELRTHVLRNGYNFARLLDGFNKDAPAVTPAALAFTTQRWAQPDFISGIATAARGLATWLQALHAYAAYKAGPTAALPLPPPMRAAPQPLTPAAAXXGNAAAARGVRPVMTADAARRLAQEXXXXXXXXXXXXXSAVPAAGGPMAATPQHSVAGSSRMSAYGRGTPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAAAVRARIQAAASVAGEEFAESVCGAGSVVDPSVLSQSGWRGSHGGSGAFEALKLARRRNELARKNAARAAARAEDLRNPLLANVRYPVVRTRPQTEYMARYRWVDC
Sbjct:    1 MAAKASQAQLSVLHAKVLALRPVCQVVSALATSGSSCQLAKPTAGMRTTTGQARPQNFAWNVDHGNSSGCDEDNDGLESGYGSDVENQDWKQVWSERFKKGPLRTDYQAHFSWPPATAYSSPVKPPGAPPXXXXXXXXXKTAFAHARAGAAARSLDQHDASSIRGQRVRPQGSVADVPSSALRGATAGXXXXXXXXXXDGDVEEQRGEAGDAHLTPLPARAWGGAAGEGAAAAAAAPEQAVRQKGAGDPTARQDNVAYLLGEEGARPPPSPARSGRAEAAQPERDDVRQLLDDWSQRASPLHTGRREPLQRAARAKRHGTDGRPLHDGGPQRSAMYTAQGERACATSCPGGAHGEREEDSVGALLHARARLPPXXXXXXXTQLGAFAASVDRAQAAVKGRDLAVLCALPRPPAAVRALVHGVVSLLAPHVRMRWEELRTHVLRNGYNFARLLDGFNKDAPAVTPAALAFTTQRWAQPDFISGIATAARGLATWLQALHAYAAYKAGPTAALPLPPPMRAAPQPLTPAAAXXGNAAAARGVRPVMTADAARRLAQEXXXXXXXXXXXXXSAVPAAGGPMAATPQHSVAGSSRMSAYGRGTPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAAAVRARIQAAASVAGEEFAESVCGAGSVVDPSVLSQSGWRGSHGGSGAFEALKLARRRNELARKNAARAAARAEDLRNPLLANVRYPVVRTRPQTEYMARYRWVDC 758

[Close]

BLAST of jgi.p|Trimin1|349577 vs. uniprot
Match: D8LMZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ6_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 3.320e-7
Identity = 59/180 (32.78%), Postives = 76/180 (42.22%), Query Frame = 1

Query:  994 RSAMYTAQGERACATSCPG-GAHGEREE---DSVGALLHARARLPPXXXXXXXTQLGAFAASVDRAQAAVKGRDLAVLCALPRPPAAVRALVHGVVSLLAPHVRMRWEELRTHVLRNGYNFARLLDGFNKD-APAVTPAALAFTTQRWAQPDFISGIATAARGLATWLQALHAYAAYKAG 1518
            +S +     E A  +S P  G  G+R     D VG LL  R    P         +    A+ DRA  A     L+ +C L  PP A R L+ G+V  L    R RW ++RTH+L N       L  FNKD A   + A L F       P  +  +A     +  WL ALH Y A K G
Sbjct:  484 QSILTEYMDEYAWPSSLPAPGRRGKRSGMGVDHVGRLLAGRRAEEPARKLPDPAVVARLGAAADRALGAGSLGHLSEMCRLKSPPLACRRLMLGLVIALGLRWR-RWSDIRTHLLGNKPELQGFLKRFNKDRAGLASTALLPFVEDPSLSPAEVRRVAACMVWVPRWLHALHDYLAVKEG 662

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349577 vs. uniprot

BLAST of jgi.p|Trimin1|349577 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YVY6_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LMZ6_ECTSI	3.320e-7	32.78	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_45	contig	Contig_45:809996..816447 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349577\|estExt_Genemark1.C_Ctg_450105
Hectar predicted targeting category	mitochondrion
Ec32 ortholog description	expressed unknown protein
Ec32 ortholog	Ec-16_001210.1
TranscriptId	349899
Track	FilteredModels1
ProteinId	349577

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349577	gene_6145	Tribonema minus UTEX_B_3156	gene	Contig_45 809996..816447 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349577	Trimin1\|349577\|estExt_Genemark1.C_Ctg_450105	Tribonema minus UTEX_B_3156	polypeptide	Contig_45 809996..816136 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_6145_1	exon_6145_1	Tribonema minus UTEX_B_3156	exon	Contig_45 809996..810109 +
exon_6145_2	exon_6145_2	Tribonema minus UTEX_B_3156	exon	Contig_45 810342..810503 +
exon_6145_3	exon_6145_3	Tribonema minus UTEX_B_3156	exon	Contig_45 810785..811258 +
exon_6145_4	exon_6145_4	Tribonema minus UTEX_B_3156	exon	Contig_45 811984..812076 +
exon_6145_5	exon_6145_5	Tribonema minus UTEX_B_3156	exon	Contig_45 812541..812627 +
exon_6145_6	exon_6145_6	Tribonema minus UTEX_B_3156	exon	Contig_45 813798..813926 +
exon_6145_7	exon_6145_7	Tribonema minus UTEX_B_3156	exon	Contig_45 814020..814189 +
exon_6145_8	exon_6145_8	Tribonema minus UTEX_B_3156	exon	Contig_45 814491..814622 +
exon_6145_9	exon_6145_9	Tribonema minus UTEX_B_3156	exon	Contig_45 814989..815419 +
exon_6145_10	exon_6145_10	Tribonema minus UTEX_B_3156	exon	Contig_45 815652..816447 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_6145	CDS_6145	Tribonema minus UTEX_B_3156	CDS	Contig_45 809996..810109 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_6145	UTR3_6145	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_45 816137..816447 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_45:809996..816447+
coding sequence from alignment at Contig_45:809996..816447+

spliced messenger RNA

>mRNA_6145 ID=mRNA_6145|Name=jgi.p|Trimin1|349577|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2588bp|location=Sequence derived from alignment at Contig_45:809996..816447+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGCCAAGGCAAGCCAGGCACAGCTGTCGGTACTGCACGCCAAGGT
GCTAGCGCTTCGGCCGGTGTGCCAGGTGGTGTCGGCGCTGGCGACATCGG
GGAGTTCCTGCCAACTAGCCAAGCCAACGGCCGGCATGAGGACCACCACC
GGCCAAGCGCGGCCGCAAAACTTTGCATGGAACGTGGATCATGGCAATTC
TAGCGGGTGTGACGAGGACAATGACGGATTGGAGAGTGGCTATGGCAGCG
ACGTCGAGAACCAGGATTGGAAGCAGGTCTGGTCGGAGCGCTTCAAGAAG
GGGCCACTGCGAACGGACTACCAGGCGCACTTCAGCTGGCCCCCAGCAAC
CGCCTACAGCTCCCCCGTCAAGCCCCCGGGCGCGCCGCCGCCGCCGCTGC
CCCCCACGCCGCCCCCCAAGACAGCGTTCGCTCACGCGCGCGCTGGCGCC
GCCGCGCGCTCTCTCGATCAGCACGACGCGAGCTCCATTCGGGGCCAGAG
AGTCAGGCCGCAGGGGAGCGTCGCGGACGTGCCGTCCTCCGCGCTGCGCG
GCGCGACTGCTGGCGGCGGCGGCAGCGGCGGCGGCGCCGAAGAGGACGGT
GACGTCGAGGAGCAGCGGGGGGAAGCGGGGGACGCGCATTTGACGCCGCT
GCCTGCGCGTGCATGGGGGGGGGCTGCAGGAGAGGGGGCAGCAGCGGCGG
CGGCGGCGCCGGAGCAGGCGGTGCGGCAGAAGGGCGCTGGCGATCCCACT
GCAAGGCAGGATAATGTGGCGTACTTGCTGGGCGAGGAGGGCGCCAGGCC
GCCCCCCAGTCCCGCGCGCAGCGGGCGTGCGGAGGCTGCGCAGCCGGAGC
GCGATGATGTGAGGCAGCTGCTGGACGATTGGTCTCAGCGCGCGAGCCCT
CTCCACACGGGGCGCAGGGAGCCATTGCAGCGCGCGGCGAGGGCCAAACG
CCATGGCACCGACGGCCGTCCGCTGCACGACGGTGGTCCCCAGCGCTCAG
CGATGTACACTGCACAGGGGGAGCGCGCGTGCGCCACCTCGTGCCCTGGC
GGCGCGCACGGCGAGCGCGAGGAGGACAGCGTCGGCGCTCTGCTGCACGC
GCGCGCTCGGCTGCCGCCGCCGCCGCCCGCCCCCAGCCCCACGCAGCTCG
GCGCGTTCGCGGCGAGCGTGGACAGGGCTCAGGCGGCGGTCAAGGGGAGG
GACCTGGCGGTTCTGTGCGCGCTTCCCAGGCCGCCGGCAGCAGTGCGCGC
GCTCGTGCACGGCGTGGTCAGCCTGCTGGCGCCGCACGTGCGCATGCGCT
GGGAGGAGCTACGAACGCACGTGCTGCGCAACGGTTACAACTTTGCGCGG
CTGCTCGACGGCTTCAACAAGGACGCGCCGGCCGTCACGCCCGCGGCGCT
CGCGTTCACCACGCAGCGCTGGGCGCAGCCGGACTTCATCAGCGGCATCG
CAACGGCGGCTCGCGGCCTGGCGACGTGGCTGCAGGCGCTGCACGCGTAC
GCGGCCTACAAAGCCGGACCCACCGCTGCGCTGCCTCTGCCGCCGCCAAT
GCGCGCCGCGCCGCAGCCGCTGACGCCGGCTGCTGCCGCTGCAGGCAACG
CTGCTGCTGCGCGTGGGGTAAGGCCTGTGATGACGGCAGATGCGGCGCGG
CGGCTGGCGCAGGAGGCGGCGACGCGGCGGCAGGGGGCGGCGGCAGCGGC
ACCATCTGCGGTTCCCGCTGCGGGGGGGCCCATGGCAGCGACGCCGCAGC
ACTCGGTCGCGGGCTCGAGCCGCATGAGCGCTTATGGACGAGGCACACCT
ATGGGCACGCCTGCCCGCCCGCCCCTCGCGCCGCGATCCGCAGCAGCAGC
AGCAGCAGCGCCAGCAGCAGCGACCCCGGAGCAGCACGCCTCGACCCCCG
CCGCCGCGCCGCGTTCCGCGCTGCGCCGCCCGGGCACCGCGCCGGGCCGC
CGCGCCGCCGCCGTCCGCGCGCGCATACAGGCCGCAGCGTCCGTCGCCGG
CGAGGAGTTTGCAGAGTCGGTGTGCGGCGCGGGCTCCGTCGTCGACCCCT
CTGTTCTCTCGCAGTCGGGGTGGCGTGGCAGCCACGGCGGCAGCGGCGCG
TTTGAGGCGCTCAAGCTGGCGCGGCGGCGCAACGAGCTGGCGCGCAAGAA
CGCGGCGCGCGCGGCGGCGCGCGCGGAGGACCTGCGCAACCCGCTGCTGG
CCAACGTGCGCTACCCCGTCGTGCGCACGCGGCCGCAGACGGAGTACATG
GCGCGGTACCGCTGGGTGGACTGCTGAATGATGGATTGTACCATGGGGTG
GACTGCTGATGAACCCTGAAGTCCGGGGCTCAATGTCGGTGTGGAAAGAG
AGGTCTTGCAGTGCACGAAGGGACAGGGTGCAGAGTTGCGCAAGACACGG
CAGACGATGCGCTGCTGGTGTCAACGGGTGATGGCTGTAGGGACGATAAC
GTCGACGCGCTCAGGTTTCGTGCGTGTGTGTGTTGTGTGTAAAACCGTCG
CGTTTGCAGAGATTGAGGAGTTGCGCTGCGGCTGTCGATTTCTCACTTAT
GCCAGTCATGGGCAGCAGATCATGCACTATTCTTCAAG

protein sequence of jgi.p|Trimin1|349577

>Trimin1|349577|estExt_Genemark1.C_Ctg_450105 ID=Trimin1|349577|estExt_Genemark1.C_Ctg_450105|Name=jgi.p|Trimin1|349577|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=759bp
MAAKASQAQLSVLHAKVLALRPVCQVVSALATSGSSCQLAKPTAGMRTTT
GQARPQNFAWNVDHGNSSGCDEDNDGLESGYGSDVENQDWKQVWSERFKK
GPLRTDYQAHFSWPPATAYSSPVKPPGAPPPPLPPTPPPKTAFAHARAGA
AARSLDQHDASSIRGQRVRPQGSVADVPSSALRGATAGGGGSGGGAEEDG
DVEEQRGEAGDAHLTPLPARAWGGAAGEGAAAAAAAPEQAVRQKGAGDPT
ARQDNVAYLLGEEGARPPPSPARSGRAEAAQPERDDVRQLLDDWSQRASP
LHTGRREPLQRAARAKRHGTDGRPLHDGGPQRSAMYTAQGERACATSCPG
GAHGEREEDSVGALLHARARLPPPPPAPSPTQLGAFAASVDRAQAAVKGR
DLAVLCALPRPPAAVRALVHGVVSLLAPHVRMRWEELRTHVLRNGYNFAR
LLDGFNKDAPAVTPAALAFTTQRWAQPDFISGIATAARGLATWLQALHAY
AAYKAGPTAALPLPPPMRAAPQPLTPAAAAAGNAAAARGVRPVMTADAAR
RLAQEAATRRQGAAAAAPSAVPAAGGPMAATPQHSVAGSSRMSAYGRGTP
MGTPARPPLAPRSAAAAAAAPAAATPEQHASTPAAAPRSALRRPGTAPGR
RAAAVRARIQAAASVAGEEFAESVCGAGSVVDPSVLSQSGWRGSHGGSGA
FEALKLARRRNELARKNAARAAARAEDLRNPLLANVRYPVVRTRPQTEYM
ARYRWVDC*

mRNA from alignment at Contig_45:809996..816447+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6145 ID=mRNA_6145|Name=jgi.p|Trimin1|349577|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6452bp|location=Sequence derived from alignment at Contig_45:809996..816447+ (Tribonema minus UTEX_B_3156 )
ATGGCAGCCAAGGCAAGCCAGGCACAGCTGTCGGTACTGCACGCCAAGGT
GCTAGCGCTTCGGCCGGTGTGCCAGGTGGTGTCGGCGCTGGCGACATCGG
GGAGTTCCTGCCAAGTGCCGGCCTGCGCCGTGACAAAGAGACCGTGACCA
TCCTCGGCCAAGACTGGCAAGATCGAGTTATATCAGCTGAAGACGCACCT
GCAGTTGATGTCGCAGCACAGGCGAGAAGCCCAGGCACCGCGTTGCCTGC
CCCATATCTGCTAACACTCATGCTGCCCACTTTTGGCACCGCAAGTTTTT
GGTTCTGAAGTGGCAGTTGGCGACTGCCTGTGACCTCTGCTTACAGCTAG
CCAAGCCAACGGCCGGCATGAGGACCACCACCGGCCAAGCGCGGCCGCAA
AACTTTGCATGGAACGTGGATCATGGCAATTCTAGCGGGTGTGACGAGGA
CAATGACGGATTGGAGAGTGGCTATGGCAGCGACGTCGAGAACCAGGATT
GGAAGCAGGTGCCTCAAGCATAGCAGGCTGATTTGATGTGACACCTTGTT
AATGCACGGCATGGACAGCCCATTCCACTCATCTCTTGCTGCATAAGGGT
TGCACTTTAGCGCATCATAATGGCAGCAGTCAAGTGCATTGGCATGCCCA
AGACCATGGTGCTGCACAAGCTTCCTCGAGCAGGGCACATCCCGGGTAGC
CCACTCCTCGCGACAGCACGCCGCCGCTGCCCGTTGCAAAATCACCCACA
TACCCTGGCGTCGTCACGCGCATCGCGCCGTTCCTGCAGGTCTGGTCGGA
GCGCTTCAAGAAGGGGCCACTGCGAACGGACTACCAGGCGCACTTCAGCT
GGCCCCCAGCAACCGCCTACAGCTCCCCCGTCAAGCCCCCGGGCGCGCCG
CCGCCGCCGCTGCCCCCCACGCCGCCCCCCAAGACAGCGTTCGCTCACGC
GCGCGCTGGCGCCGCCGCGCGCTCTCTCGATCAGCACGACGCGAGCTCCA
TTCGGGGCCAGAGAGTCAGGCCGCAGGGGAGCGTCGCGGACGTGCCGTCC
TCCGCGCTGCGCGGCGCGACTGCTGGCGGCGGCGGCAGCGGCGGCGGCGC
CGAAGAGGACGGTGACGTCGAGGAGCAGCGGGGGGAAGCGGGGGACGCGC
ATTTGACGCCGCTGCCTGCGCGTGCATGGGGGGGGGCTGCAGGAGAGGGG
GCAGCAGCGGCGGCGGCGGCGCCGGAGCAGGCGGTGCGGCAGAAGGGCGC
TGGCGATCCCACTGTCAAGGCAAGCTTCGCTGCAGCTCATGCGTGTCACA
GTGTGGCGCGACGTGCTGTGAACTAGCCGTCCCTTGCTGCGAGTTCAGTG
GCCTTCTGCTACGCATGCTACGCAGCAGTTGCGGATCATCAGTTACAGTA
ATTGTCATCGCCGGCGCGACTGACACATAGGCTTCATGACGTGCTCCGTG
CGCCGCCCCACTGAGGCTCTGCAACCGCCACCAGACGTGTGCGGCGGAAC
AGCAGATGACCATCCTTGCATGCCCGGGCAGCCTCACCCAGTGCGCGAAG
TATTTGATAGGCTTGAGAAACGCTTCAGCTGTGCAGATGGCTATGCCAGC
AGCTGCCGCTTGCAGCATGCAGTGCCGCAGCCACCTCATTTGCCATTGCT
GGTGGTGACTTGCGCCCCACAGCTTTGCCCGCTCGGGCATGAGCGTTCGT
ATTCGAGGAACAGTGCACGTCTGCTATTCCCTTCAGTACACAAGGCTCAG
GCATGCCATTGAGTATTGTGTCTCAAGTACACGCCACTTTGGACTGTGCC
ATGTACTGCTATGAACTGCCAGCTGTGCTGCCTATTGACATATATTGACA
CCAATACAGAGCCCACTGGAGACAGGCAGGGCCCCAGTAATCCCCACTGC
CCTGTGTGTCAGACCTGCACTCTCACGCGTCCGCTGTTGCGCTGCACTCA
CTGCTGGTCTAACATGCTGAACCGCATTGTTCAACCAGGCAAGGCAGGAT
AATGTGGCGTACTTGCTGGGCGAGGAGGGCGCCAGGCCGCCCCCCAGTCC
CGCGCGCAGCGGGCGTGCGGAGGCTGCGCAGGTCAGTGCGTGTTGAGCAC
TGTAGATGCGCGAGCGCATACGCGTGTCATGCATGTGATTATGCTTAGGT
GTGTGTGTCTGCGTGTGTGAATGTGTTCATTTTGGGCCCAATTGCGGATG
GCATTCGGGTATCAGCAGTTGGTGTCGATTGACGTTTGGCTGCATGTGGT
GATTAGAAGCCTCCGATCTGATGTTATGTCGATAACCTTCTGTCGGCGAC
TTTGAGATGCTGACTGGCTACTAGAATATGTGTGGCGCAGCATACATGTC
AATGTAGCATGCAATGTTGCACTCTCGCCAGGCCGCATGTGCTCATGACA
AAGCTCCGGTGCAGATGCTCATGTAGTCAGGCAGCACCTGACGCTGCCAG
CCTATGTCAATGCGATGTCGTATGCATTACCATCATGAATTTGCCTCATA
ACGCCATGCGCCACTTGGGTGCCAACATTTGCATGACGATTGCAGCCGGA
GCGCGATGATGTGAGGCAGCTGCTGGACGATTGGTCTCAGCGCGCGAGCC
CTCTCCACACGGGGCGCAGGGAGCCATTGCAGGTGTGCCAATGCCCATTC
TGGCAGCGCGCATTCAATGCATTCGTACTCCAATGCCCATCCTGGCAGCG
CGCGTGCCATGCAGTCGTACTTCAATGCAGACTGAGCCTTTGCGAAGGCC
GAGAGCACTTAGCAATGCCACCCGCCTGTTCATGACAGGGCCGTCGATGC
ATCCTGTCTTGCGCCCAATGCTAACCCTAACCCTAACGCCATCCCGCACC
TCAGAGCATGCATGCCGCTCGTCAGTACGTGCAACATCTTTGAGTCAGCG
ACCAATCTCATGCCGACTTTTCTGCCCATCTCATGCCAACTCTCATGCCG
CACGCGTCCCTGCGTTGTTATTGCAGCCCGAGCAGGATGACGTGAGGCAG
CTGCTCCACGATGGCAGCGCTCACCAACGTCCGGCAGTGCCCACGAGCCC
AATACACACTGGACGCAGAGAGCCACCGCAGGTGCGTGCCGTGATCTCCT
GCGCGTCAAGCGCTCTCGCCGCCATACAGAATTGCGAGATGCGATCGCTA
GGTGACAACAATTGAGTGCATGATGCCGGGCAGTCGGTGGTCTGGTGCAG
ACCTGGTTCCAGAGCAAGTTTGGCTGGTGACGAGGTAATGCACCATCAAA
GCGCATGCGGTCATGCAAGTGAGTCAGAGGGTCGCAAGCACACGGCGCAG
GATGCGCTGACTCATTTAGCGCTTGAGGCATAATGACCTCAGCGGTTGAA
GCGGACCCCTATGGCAGGCCACCGAAGTCAGCCAATGGCTGTGAACAGTG
ATGATGCAGGCACCGGTGAAGAGGAGCAAGCCTCAGGGTTGCTTGCAGGC
TGGCTCAAATGTGATTGCGCTAGCTGTTGTGAGATATTTCAGGCATCAGC
ACGACCAGATGTGACAGCACAAATGCTCGTTGTCAATGTTAGTGATATTT
GAACTAGTGCAGGCGGCGCTGGCTGCAGTGCCGCCCCTGCCTTACGATGC
TTGCTGCAACAATTGCAGCAACGTGTATGCCGGCACCACATGGCATTAGC
GAGTGATAATGCGCAGCAGCCTGCCGGATCGCTCAGCCGTCCCTGCCGTC
CCTGTTTAGTGAGCATCAACAACCGCGCGCCCTGACGAGCATGTACCCAG
CACCGCCGATGTGGCGCGATGCGACGCCTGACGCCTGCGAATCTGCGCTG
AGCGCGCGGCGAGGGCCAAACGCCATGGCACCGACGGCCGTCCGCTGCAC
GACGGTGGTCCCCAGCGCTCAGCGATGTACACTGCACAGGGGGAGCGCGC
GTGCGCCACCTCGTGCCCTGGCGGCGCGCACGTGGCGCCGCCCAGCGCCT
CACGATATGGCGCATGTTGGTACTGAATGGCCGCACTCATTGTCGCTCGG
TCTCATCCCATGTTCTCCGCACAGGGCGAGCGCGAGGAGGACAGCGTCGG
CGCTCTGCTGCACGCGCGCGCTCGGCTGCCGCCGCCGCCGCCCGCCCCCA
GCCCCACGCAGCTCGGCGCGTTCGCGGCGAGCGTGGACAGGGCTCAGGCG
GCGGTCAAGGGGAGGGACCTGGCGGTTCTGTGCGCGCTTCCCAGGTGGGC
GGCGCGGACGTGCTCAGCATGCTTGAGCTCCTCCTGCACTATCGAGTGCA
TCAGAATCGTACATGGAGGGCTCCATTCTTGTCTGGGGTGCGATGCGTAC
AGCGTTCATTGTCTCAGACAGCTTTCGTAAGAGCCATGCGGACGACTCGG
GGTTGCTGTCGGCCTGACGGAGAGGCTGGCCCTGCTGCTGCGCGGCGCGT
TGCCGGGCAAGTGCCAGGTTTTCAGGGGCGGTCGTACCACTACGCGCTGC
TGAAACGCGCTGATGACCGATGGTATGTTTGGTGTTGCTGTGCAGGCCGC
CGGCAGCAGTGCGCGCGCTCGTGCACGGCGTGGTCAGCCTGCTGGCGCCG
CACGTGCGCATGCGCTGGGAGGAGCTACGAACGCACGTGCTGCGCAACGG
TTACAACTTTGCGCGGCTGCTCGACGGGTGAGTGGCGCGCAGCCGGAGCG
CTGCGACATGTGTAGTCAAAGTTAAAGTTGACGTGCAGTTTGATTGCCAG
GAGCAGCAGAGGTTAAGGGTGCAACATAGTCTTGTGGCTTCTCTGTCACA
GCTGCACTGTGAAGCATGTAGTGCATCGGTAGTCTCAATGTGCGAAGGTG
TTTTCAGAGTGCCACGTGTTTAGAGGTGATGGGGGGGACTTTGCTGGATG
AACATTAGCCTCATTTCACTTGGCGCTCCAGACATTTTGGTGGTGCAGCG
CGCACTCGATCCCACAGGCACCGTGGCACCCAAACTTCATCTTTTTTTAA
CTCCTGAGCTGCGACTCTGATCTCGCTCTCTCTCAACGCGCAGCTTCAAC
AAGGACGCGCCGGCCGTCACGCCCGCGGCGCTCGCGTTCACCACGCAGCG
CTGGGCGCAGCCGGACTTCATCAGCGGCATCGCAACGGCGGCTCGCGGCC
TGGCGACGTGGCTGCAGGCGCTGCACGCGTACGCGGCCTACAAAGCCGGA
CCCACCGCTGCGCTGCCTCTGCCGCCGCCAATGCGCGCCGCGCCGCAGCC
GCTGACGCCGGCTGCTGCCGCTGCAGGCAACGCTGCTGCTGCGCGTGGGG
TAAGGCCTGTGATGACGGCAGATGCGGCGCGGCGGCTGGCGCAGGAGGCG
GCGACGCGGCGGCAGGGGGCGGCGGCAGCGGCACCATCTGCGGTTCCCGC
TGCGGGGGGGCCCATGGCAGCGACGCCGCAGCACTCGGTCGCGGGCTCGA
GCCGCATGAGCGCTTATGGACGAGGTACGCGCCGTGGTGGCGGACGCGAG
GCTTGTGCACCAGCAGCAGGGGAATGCGTGATATCATTGGACCAGAGCTG
ACAATGTGCTGTGCGCAAGCTGCATGCAGCCACTGCATGGGTCGGCATGC
TGCGAATGCAGCGTGTGCGCGAGGCACAGTGTTTCCTTCATCACACTTGT
GTGACACGCGGCTGAGCCAGCGCTTCCTGCCCCCTTCCCCCCCCCCCCCT
CCCCAGGCACACCTATGGGCACGCCTGCCCGCCCGCCCCTCGCGCCGCGA
TCCGCAGCAGCAGCAGCAGCAGCGCCAGCAGCAGCGACCCCGGAGCAGCA
CGCCTCGACCCCCGCCGCCGCGCCGCGTTCCGCGCTGCGCCGCCCGGGCA
CCGCGCCGGGCCGCCGCGCCGCCGCCGTCCGCGCGCGCATACAGGCCGCA
GCGTCCGTCGCCGGCGAGGAGTTTGCAGAGTCGGTGTGCGGCGCGGGCTC
CGTCGTCGACCCCTCTGTTCTCTCGCAGTCGGGGTGGCGTGGCAGCCACG
GCGGCAGCGGCGCGTTTGAGGCGCTCAAGCTGGCGCGGCGGCGCAACGAG
CTGGCGCGCAAGAACGCGGCGCGCGCGGCGGCGCGCGCGGAGGACCTGCG
CAACCCGCTGCTGGCCAACGTGCGCTACCCCGTCGTGCGCACGCGGCCGC
AGACGGAGTACATGGCGCGGTACCGCTGGGTGGACTGCTGAATGATGGAT
TGTACCATGGGGTGGACTGCTGATGAACCCTGAAGTCCGGGGCTCAATGT
CGGTGTGGAAAGAGAGGTCTTGCAGTGCACGAAGGGACAGGGTGCAGAGT
TGCGCAAGACACGGCAGACGATGCGCTGCTGGTGTCAACGGGTGATGGCT
GTAGGGACGATAACGTCGACGCGCTCAGGTTTCGTGCGTGTGTGTGTTGT
GTGTAAAACCGTCGCGTTTGCAGAGATTGAGGAGTTGCGCTGCGGCTGTC
GATTTCTCACTTATGCCAGTCATGGGCAGCAGATCATGCACTATTCTTCA
AG

Coding sequence (CDS) from alignment at Contig_45:809996..816447+

>mRNA_6145 ID=mRNA_6145|Name=jgi.p|Trimin1|349577|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2277bp|location=Sequence derived from alignment at Contig_45:809996..816447+ (Tribonema minus UTEX_B_3156 )
ATGGCAGCCAAGGCAAGCCAGGCACAGCTGTCGGTACTGCACGCCAAGGT
GCTAGCGCTTCGGCCGGTGTGCCAGGTGGTGTCGGCGCTGGCGACATCGG
GGAGTTCCTGCCAACTAGCCAAGCCAACGGCCGGCATGAGGACCACCACC
GGCCAAGCGCGGCCGCAAAACTTTGCATGGAACGTGGATCATGGCAATTC
TAGCGGGTGTGACGAGGACAATGACGGATTGGAGAGTGGCTATGGCAGCG
ACGTCGAGAACCAGGATTGGAAGCAGGTCTGGTCGGAGCGCTTCAAGAAG
GGGCCACTGCGAACGGACTACCAGGCGCACTTCAGCTGGCCCCCAGCAAC
CGCCTACAGCTCCCCCGTCAAGCCCCCGGGCGCGCCGCCGCCGCCGCTGC
CCCCCACGCCGCCCCCCAAGACAGCGTTCGCTCACGCGCGCGCTGGCGCC
GCCGCGCGCTCTCTCGATCAGCACGACGCGAGCTCCATTCGGGGCCAGAG
AGTCAGGCCGCAGGGGAGCGTCGCGGACGTGCCGTCCTCCGCGCTGCGCG
GCGCGACTGCTGGCGGCGGCGGCAGCGGCGGCGGCGCCGAAGAGGACGGT
GACGTCGAGGAGCAGCGGGGGGAAGCGGGGGACGCGCATTTGACGCCGCT
GCCTGCGCGTGCATGGGGGGGGGCTGCAGGAGAGGGGGCAGCAGCGGCGG
CGGCGGCGCCGGAGCAGGCGGTGCGGCAGAAGGGCGCTGGCGATCCCACT
GCAAGGCAGGATAATGTGGCGTACTTGCTGGGCGAGGAGGGCGCCAGGCC
GCCCCCCAGTCCCGCGCGCAGCGGGCGTGCGGAGGCTGCGCAGCCGGAGC
GCGATGATGTGAGGCAGCTGCTGGACGATTGGTCTCAGCGCGCGAGCCCT
CTCCACACGGGGCGCAGGGAGCCATTGCAGCGCGCGGCGAGGGCCAAACG
CCATGGCACCGACGGCCGTCCGCTGCACGACGGTGGTCCCCAGCGCTCAG
CGATGTACACTGCACAGGGGGAGCGCGCGTGCGCCACCTCGTGCCCTGGC
GGCGCGCACGGCGAGCGCGAGGAGGACAGCGTCGGCGCTCTGCTGCACGC
GCGCGCTCGGCTGCCGCCGCCGCCGCCCGCCCCCAGCCCCACGCAGCTCG
GCGCGTTCGCGGCGAGCGTGGACAGGGCTCAGGCGGCGGTCAAGGGGAGG
GACCTGGCGGTTCTGTGCGCGCTTCCCAGGCCGCCGGCAGCAGTGCGCGC
GCTCGTGCACGGCGTGGTCAGCCTGCTGGCGCCGCACGTGCGCATGCGCT
GGGAGGAGCTACGAACGCACGTGCTGCGCAACGGTTACAACTTTGCGCGG
CTGCTCGACGGCTTCAACAAGGACGCGCCGGCCGTCACGCCCGCGGCGCT
CGCGTTCACCACGCAGCGCTGGGCGCAGCCGGACTTCATCAGCGGCATCG
CAACGGCGGCTCGCGGCCTGGCGACGTGGCTGCAGGCGCTGCACGCGTAC
GCGGCCTACAAAGCCGGACCCACCGCTGCGCTGCCTCTGCCGCCGCCAAT
GCGCGCCGCGCCGCAGCCGCTGACGCCGGCTGCTGCCGCTGCAGGCAACG
CTGCTGCTGCGCGTGGGGTAAGGCCTGTGATGACGGCAGATGCGGCGCGG
CGGCTGGCGCAGGAGGCGGCGACGCGGCGGCAGGGGGCGGCGGCAGCGGC
ACCATCTGCGGTTCCCGCTGCGGGGGGGCCCATGGCAGCGACGCCGCAGC
ACTCGGTCGCGGGCTCGAGCCGCATGAGCGCTTATGGACGAGGCACACCT
ATGGGCACGCCTGCCCGCCCGCCCCTCGCGCCGCGATCCGCAGCAGCAGC
AGCAGCAGCGCCAGCAGCAGCGACCCCGGAGCAGCACGCCTCGACCCCCG
CCGCCGCGCCGCGTTCCGCGCTGCGCCGCCCGGGCACCGCGCCGGGCCGC
CGCGCCGCCGCCGTCCGCGCGCGCATACAGGCCGCAGCGTCCGTCGCCGG
CGAGGAGTTTGCAGAGTCGGTGTGCGGCGCGGGCTCCGTCGTCGACCCCT
CTGTTCTCTCGCAGTCGGGGTGGCGTGGCAGCCACGGCGGCAGCGGCGCG
TTTGAGGCGCTCAAGCTGGCGCGGCGGCGCAACGAGCTGGCGCGCAAGAA
CGCGGCGCGCGCGGCGGCGCGCGCGGAGGACCTGCGCAACCCGCTGCTGG
CCAACGTGCGCTACCCCGTCGTGCGCACGCGGCCGCAGACGGAGTACATG
GCGCGGTACCGCTGGGTGGACTGCTGA