mRNA_6099 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|166585 vs. uniprot
Match: A0A836CCW1_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCW1_9STRA) HSP 1 Score: 751 bits (1938), Expect = 3.700e-274 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 1
Query: 1 MGLSRHDQRLSLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHNADDLDRILGYDQSCEHPVVLQLGGSDPELVRTACELARPYQYDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSGGAQTSVKCRIGVDDEDSYASLARFVDVVARGGGVSDFIVHARKAILKGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTYAGVQEALDGGAHGVMVGRAVLERPWYWSQSDSRVFGATDAALNRRQVLQTYFEYAEGVEAEAGARWLTYRRRLLKPVWNLFHGEPGGKKFRARLDGMITQERPFHAIINDALQELPPDVVDAPPGVGRTFKDLKRTKVAPPQLEYQCL 1104
MGLSRHDQRLSLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHNADDLDRILGYDQSCEHPVVLQLGGSDPELVRTACELARPYQYDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSGGAQTSVKCRIGVDDEDSYASLARFVDVVARGGGVSDFIVHARKAILKGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTYAGVQEALDGGAHGVMVGRAVLERPWYWSQSDSRVFGATDAALNRRQVLQTYFEYAEGVEAEAGARWLTYRRRLLKPVWNLFHGEPGGKKFRARLDGMITQERPFHAIINDALQELPPDVVDAPPGVGRTFKDLKRTKVAPPQLEYQCL
Sbjct: 1 MGLSRHDQRLSLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHNADDLDRILGYDQSCEHPVVLQLGGSDPELVRTACELARPYQYDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSGGAQTSVKCRIGVDDEDSYASLARFVDVVARGGGVSDFIVHARKAILKGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTYAGVQEALDGGAHGVMVGRAVLERPWYWSQSDSRVFGATDAALNRRQVLQTYFEYAEGVEAEAGARWLTYRRRLLKPVWNLFHGEPGGKKFRARLDGMITQERPFHAIINDALQELPPDVVDAPPGVGRTFKDLKRTKVAPPQLEYQCL 368
BLAST of jgi.p|Trimin1|166585 vs. uniprot
Match: D7FQR5_ECTSI (FAD binding / catalytic/ tRNA dihydrouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR5_ECTSI) HSP 1 Score: 443 bits (1139), Expect = 5.160e-151 Identity = 213/345 (61.74%), Postives = 257/345 (74.49%), Query Frame = 1
Query: 4 GLSRHDQRLSLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHNADDLDRILGYDQSCEHPVVLQLGGSDPELVRTACELARPYQYDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSG-GAQTSVKCRIGVDDEDSYASLARFVDVVARGGGVSDFIVHARKAILKGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTYAGVQEALDGGAHGVMVGRAVLERPWYWSQSDSRVFGATDAALNRRQVLQTYFEYAEGVEAEAGARWLTYRRRLLKPVWNLFHGEPGGKKFRARLDGMITQERPFHAIINDALQELPPDVVDAPPG 1035
L R + SLAPMMEYTDRHMRY+LRL T + V+WTEM+P +I+HN DDL R L Y++ EHPVVLQ+GGSD VR AC LARPY+YD INLN GCPSE+VAGKGAFGAALMR P LV D+C AM++G+G +VKCRIGVD++DSY LA FV+ V+RG GV FIVHARKAIL GLSP QNR +PPLKYD+VYRLV+DFP++ FTLNGGV TY L+ GAHGVMVGR+ PWYWSQ+DS +FGA D L RR+VL+ Y EY E E G +WL RRRL KP+W++FHGE GGKKFR L+GM+ +++ F I+ +L +P D VD PG
Sbjct: 74 ALGRGREVFSLAPMMEYTDRHMRYLLRLLTTRTVLWTEMVPSSTIIHNPDDLGRFLDYNEEVEHPVVLQIGGSDTTDVREACRLARPYKYDAINLNCGCPSEKVAGKGAFGAALMRSPSLVKDLCLAMKDGAGEDTPITVKCRIGVDNDDSYEQLAAFVEEVSRGAGVPHFIVHARKAILGGLSPAQNRNIPPLKYDFVYRLVKDFPDVDFTLNGGVNTYEEAVSCLEQGAHGVMVGRSWSSNPWYWSQADSMLFGAKDPGLTRREVLERYAEYGERQEKACGEKWLACRRRLAKPIWHMFHGEKGGKKFRVALEGMLREDKSFGEIVQKSLLAMPQDQVDWLPG 418
BLAST of jgi.p|Trimin1|166585 vs. uniprot
Match: A0A4D9D156_9STRA (tRNA-dihydrouridine synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D156_9STRA) HSP 1 Score: 374 bits (961), Expect = 1.940e-125 Identity = 194/343 (56.56%), Postives = 242/343 (70.55%), Query Frame = 1
Query: 19 DQRLSLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHNADDLDRILGYDQSCEHPVVLQLGGSDPELVRTACELARPYQYDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSGGA-QTSVKCRIGVDDEDSYASLARFVDVVARGGGVSDFIVHARKAILKGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTYAGVQEALDGGAHGVMVGRAVLERPWYWSQSDSRVFGATDA--ALNRRQVLQTYFEYAEGVEAEAGARWLTYRRRLLKPVWNLFHGEPGGKKFRARLD-GMITQERPFHAIINDALQELPPDVVDAPPG 1035
D+R+SLAPMMEYTDRH+R++LRL +K+MV++TEMI ++ HN + DR L ++ EHPVVLQLGGSDP + A LA PY+Y+ +NLN GCPSERV+GKG FGAALMREP VA++C AM EGS G +VKCRIGVDD+DSY LA FV+ V+ V F+VHARKAIL GLSP+QNR+VPPLKY +VYRL R+FP L FTLNGGV +Y V E L G HGVM+GRAV+ RP+YWS D+RVFG+ D L RR+VL Y YA+ EA G R RR L+KPV NLF GEP GK+FRA LD ++ ++ A +P +++ PG
Sbjct: 22 DERVSLAPMMEYTDRHLRFLLRLLSKRMVLYTEMITAPTLYHNEESRDRFLRFNSPAEHPVVLQLGGSDPGQLAEASRLASPYKYNAMNLNCGCPSERVSGKGCFGAALMREPERVAELCTAMSEGSRGKIPVTVKCRIGVDDDDSYEQLAHFVETVSGASPVRHFLVHARKAILGGLSPDQNRRVPPLKYPFVYRLSREFPHLRFTLNGGVLSYEDVAEHLREGVHGVMIGRAVVARPFYWSDVDARVFGSADGNPGLTRREVLDRYGAYAQEEEARGGPRM---RRLLIKPVHNLFAGEPMGKRFRATLDQALLEPSLDVRQVLERATAVMPAALLEVLPG 361
BLAST of jgi.p|Trimin1|166585 vs. uniprot
Match: A0A7S3USD9_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USD9_HETAK) HSP 1 Score: 352 bits (903), Expect = 6.600e-116 Identity = 182/347 (52.45%), Postives = 232/347 (66.86%), Query Frame = 1
Query: 31 SLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHNAD-DLDRILGYDQSCEHPVVLQLGGSDPELVRTACELARPYQYDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSGGAQTSVKCRIGVDDEDSYASLARFVDVVARGGGVSDFIVHARKAILKGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTYAGVQEALDGGAHGVMVGRAVLERPWYWSQSDSRVFGATDAALNRRQVLQTYFEYAEGVEAEAGARWLTYRRRLLKPVWNLFHGEPGGKKFRARLDGMITQERPFHAIINDALQELPPDVVDAPPGVGRTFKDLKRT 1068
SLAPMM+YTDRHMR+++RL +K MV++TEMI G+IV+N + +L R L Y +SCEHPVVLQLGGSDP +R A A PY+YD +NLN GCPSE+VAGKG FGAALMRE LV D+C M +VK RIGVDDEDSY L F++ VA V FIVHAR AIL GLSP QNR++PPLKYDYVY LV+D+PE FT+NGG+T Y ++E L G HGVMVGRA+ P+ WSQ D V+GA + L RR++L+ Y EY + + G R R+ L K + N F G+ GKKFR +D ++ E P + ++A + L + +DA PG + D T
Sbjct: 53 SLAPMMDYTDRHMRFLMRLLSKDMVLYTEMIASGTIVNNPENELGRWLDYSESCEHPVVLQLGGSDPGELRRAAARAAPYRYDAVNLNCGCPSEKVAGKGCFGAALMREAELVGDLCRGMA-AELDCPVTVKSRIGVDDEDSYEGLCNFIETVADRSPVRHFIVHARTAILGGLSPAQNRQIPPLKYDYVYNLVKDYPEFQFTINGGITEYEEIREHLGRGVHGVMVGRAINADPYKWSQVDELVYGAANPGLTRREILERYGEYCDEMVELWGPR---VRQTLKKHILNFFVGQRNGKKFRCAMDKLVRTELPLSKVFSNAAEILTDETLDAKPGEKVVYPDSSFT 395
BLAST of jgi.p|Trimin1|166585 vs. uniprot
Match: A0A7S2C7I3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C7I3_9STRA) HSP 1 Score: 344 bits (882), Expect = 1.110e-112 Identity = 183/346 (52.89%), Postives = 238/346 (68.79%), Query Frame = 1
Query: 19 DQRLSLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHNADDLDRILGYDQSCEHPVVLQLGGSDPELVRTACELARPYQYDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSGGAQTSVKCRIGVDDEDSYASLARFVDVVARGGGVSDFIVHARKAILKGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTYAGVQEALDGGAHGVMVGRAVLERPWYWSQSDSRVFG-ATDAALNRRQVLQTYFEYAEGVEAEAGARWLTY----RRRLLKPVWNLFHGEPGGKKFRARLDGMI-TQERPFHAIINDALQELPPDVVDAPPGV 1038
D S+APMM+YTDRH RY+LRL + K V++TEM+ ++VHN D +DR L E+PVVLQLGGSD E +RT+ + A Y YD+INLN GCPS++VAGKG+FGA LM + + V +C AM + G T VKCRIGVDD+DSY LA FV V++ GGV FIVHARKAIL GLSPE+NR++PP+KYD+VY+LV DFP L F++NG V TY V E L G HGVMVGR+V+E+PW WS+ DSR++G A+D +RR+VL+ Y +YAE + + Y +R +L+ NLF GEP G+KFR LD + T R H I+ A L P+ +DA PG+
Sbjct: 73 DHAFSVAPMMDYTDRHFRYLLRLLSSKAVLYTEMVGASTLVHNPD-IDRWLRLSDDVENPVVLQLGGSDCEDLRTSVKRASAYNYDEINLNCGCPSDKVAGKGSFGATLMLDAKRVGQLCDAMAQECGKPIT-VKCRIGVDDQDSYEQLAEFVGTVSQTGGVEHFIVHARKAILGGLSPEENRRIPPIKYDHVYQLVADFPSLRFSMNGEVKTYEDVSEHLSRGLHGVMVGRSVIEQPWLWSEVDSRIYGLASDNVPSRRKVLEAYADYAEQEISRMLIKDPKYAPRLKRAILRHTANLFRGEPNGRKFRVVLDQQLNTPGRSPHEILQTASGALFPETLDAGPGM 416
BLAST of jgi.p|Trimin1|166585 vs. uniprot
Match: A0A0G4ELS3_VITBC (tRNA-dihydrouridine synthase n=2 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4ELS3_VITBC) HSP 1 Score: 321 bits (822), Expect = 4.060e-104 Identity = 178/355 (50.14%), Postives = 237/355 (66.76%), Query Frame = 1
Query: 25 RLSLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHN---------ADDL-DRILGYD-QSCEHPVVLQLGGSDPELVRTACELARPYQ-YDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSGGAQTSVKCRIGVDDEDSYASLARFVDVVARGGGVSDFIVHARKAILKGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTYAGVQEALDG--GAHGVMVGRAVLERPWYWSQSDSRVFGATDAALNRRQVLQTYFEYAEG-VEAEAGARWLTYRRRLLKPVWNLFHGEPGGKKFRARLDGMITQ-ERPFHAIINDALQELPPDVVDAPPGVG 1041
R S+APMM+YTD+H R+++RL T+ ++TEM+ ++ + AD + R L + +S E P VLQLGGSDP+++ A A Y + ++NLN GCPSERVAGKGAFGAALMREP LVA++C AMR+G GG T+VKCRIGVDD+DS+ L RF+ VA GVS FI+H+RKAIL GLSPEQNRK+PPL Y+YVYRLV FP L FTLNGGV TY + + GVMVGRAVL+RP+YWS+ DSR++G + LNRR+VL Y Y + +E +R + R LLK NLF GEP +K++ RL+ + + + AI+ +A ++L V++ PG G
Sbjct: 20 RFSVAPMMDYTDKHFRFLMRLLTRNATLYTEMMAANALHYTNRQAAADATADSMIPRSLATNAESIESPCVLQLGGSDPDVLAEASRTASAYHPFTELNLNCGCPSERVAGKGAFGAALMREPALVAELCKAMRQG-GGRPTTVKCRIGVDDQDSFEELQRFISTVAERAGVSHFIIHSRKAILTGLSPEQNRKIPPLIYEYVYRLVEGFPGLRFTLNGGVLTYEDIDMHFERCPTLTGVMVGRAVLDRPFYWSEVDSRLYGRDNLGLNRREVLAAYGSYCDAEMERTDPSRQRSLRNLLLKHALNLFAGEPMSRKYKQRLEALRQRGDVSVSAILREAEEQLHEGVLERRPGSG 373
BLAST of jgi.p|Trimin1|166585 vs. uniprot
Match: A0A2K1I9E4_PHYPA (Dus domain-containing protein n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1I9E4_PHYPA) HSP 1 Score: 315 bits (808), Expect = 4.670e-101 Identity = 170/361 (47.09%), Postives = 225/361 (62.33%), Query Frame = 1
Query: 25 RLSLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHNADDLDRILGYDQSCEHPVVLQLGGSDPELVRTACELARPYQYDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSGGAQTSVKCRIGVDDEDSYASLARFVDVVARGGGVSDFIVHARKAILKGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTYAGVQEALDGGAHGVMVGRAVLERPWYW-SQSDSRVFGATDAALNRRQVLQTYFEYAEGVEAEAGARWLTYRRRLLKPVWNLFHGEPGGKKFRARLDGMITQERPFHAIINDALQELPPDVVDAPPGVGRTFKDLKRTKVA-PPQLEYQC 1101
R S+APMM++TD H R + RL +K ++TEM+ +I+H D+LD+ L +++ +HP+VLQLGGSDPE + A LA Y+YD+INLN GCPSE+VAG G FGA+LM E LVA+ AA+ EGS G +VKCRIGVDD DSY L +FV V+ F+VHARKAILKGLSP NR +PPLKY+YVY L+RDFP L FTLNGGV V EAL G GVM+GRA PW D+ V+G + L RRQ+L+ Y EYA+ + G + + R L+KP+ +FH E G +R +D + A++ + L LP V+D+PP + T L PP ++C
Sbjct: 85 RFSVAPMMDWTDNHYRTLARLMSKHAWLYTEMVVADTIIHQQDNLDKFLKFNE-VQHPIVLQLGGSDPEKLLKASLLASVYEYDEINLNCGCPSEKVAGHGCFGASLMLESGLVAECMAAIAEGSPGTPVTVKCRIGVDDFDSYDLLHKFVTTVSSSSPTQHFVVHARKAILKGLSPAANRTIPPLKYEYVYALIRDFPNLKFTLNGGVVNTHQVNEALQEGVFGVMLGRAAYNYPWATLGNVDNSVYGDSTPRLTRRQILEKYVEYADAELHKYGPKKPSVRH-LVKPLLGIFHAESGAGVWRRAVDNSLRNAETVGALLKETLCVLPDFVLDSPPPLEATSVSLHANLAPLPPTPSFEC 443
BLAST of jgi.p|Trimin1|166585 vs. uniprot
Match: A9U5E7_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9U5E7_PHYPA) HSP 1 Score: 312 bits (800), Expect = 1.090e-100 Identity = 166/344 (48.26%), Postives = 220/344 (63.95%), Query Frame = 1
Query: 25 RLSLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHNADDLDRILGYDQSCEHPVVLQLGGSDPELVRTACELARPYQYDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSGGAQTSVKCRIGVDDEDSYASLARFVDVVARGGGVSDFIVHARKAILKGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTYAGVQEALDGGAHGVMVGRAVLERPWYW-SQSDSRVFGATDAALNRRQVLQTYFEYAEGVEAEAGARWLTYRRRLLKPVWNLFHGEPGGKKFRARLDGMITQERPFHAIINDALQELPPDVVDAPPGVGRTFK 1053
R S+APMM++TD H R + RL +K ++TEM+ +I+H D+LD+ L +++ +HP+VLQLGGSDPE + A LA Y+YD+INLN GCPSE+VAG G FGA+LM E LVA+ AA+ EGS G +VKCRIGVDD DSY L +FV V+ F+VHARKAILKGLSP NR +PPLKY+YVY L+RDFP L FTLNGGV V EAL G GVM+GRA PW D+ V+G + L RRQ+L+ Y EYA+ + G + + R L+KP+ +FH E G +R +D + A++ + L LP V+D+PP + T +
Sbjct: 25 RFSVAPMMDWTDNHYRTLARLMSKHAWLYTEMVVADTIIHQQDNLDKFLKFNE-VQHPIVLQLGGSDPEKLLKASLLASVYEYDEINLNCGCPSEKVAGHGCFGASLMLESGLVAECMAAIAEGSPGTPVTVKCRIGVDDFDSYDLLHKFVTTVSSSSPTQHFVVHARKAILKGLSPAANRTIPPLKYEYVYALIRDFPNLKFTLNGGVVNTHQVNEALQEGVFGVMLGRAAYNYPWATLGNVDNSVYGDSTPRLTRRQILEKYVEYADAELHKYGPKKPSVRH-LVKPLLGIFHAESGAGVWRRAVDNSLRNAETVGALLKETLCVLPDFVLDSPPPLEATHR 366
BLAST of jgi.p|Trimin1|166585 vs. uniprot
Match: A0A7S3X053_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X053_EMIHU) HSP 1 Score: 312 bits (799), Expect = 6.730e-100 Identity = 177/361 (49.03%), Postives = 227/361 (62.88%), Query Frame = 1
Query: 19 DQRLSLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVH-NADDLDRILGYDQSCEHPVVLQLGGSDPELVRTACELARPYQYDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSGGAQTSVKCRIGV----------DDEDSYASLARFVDVVARGGGVSDFIVHARKAILKGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTY--------AGVQEALDGGAHGVMVGRAVLERPWYWSQSDSRVFGAT-DAALNRRQVLQTYFEYAEGVEAEAGARWLTYRRRLLKPVWNLFHGEPGGKKFRARLDGMITQER-PFHAIINDALQE-LPPDVVDAPPG 1035
D LS+APMM+YT+R +RY+LR T++ ++TEM+ ++VH + +L R L +D EHPVVLQ+GGSDP ++R A L + YD INLN GCPS+RVAG G FGAALMREP LV D CAAM EG+ G SVKCRIGV D+++ LA FV VA GGVS F VHAR+A+L GLSP QNR+VPPL Y V RL P LSF+LNGGV AG DG GVMVGRAV+ RPW W+ +DS ++GA D A +RR++L+ Y + + +EA R RR +L P NLF GEP GKKFRA LD + F +++ A ++ L P+ +D+ PG
Sbjct: 41 DGALSVAPMMDYTNRFLRYLLRRVTRRTTLYTEMVTANTLVHCDPGELPRFLEHDGDNEHPVVLQIGGSDPAMLRRASALGASWGYDAINLNCGCPSDRVAGSGCFGAALMREPSLVGDCCAAMSEGAPGVPISVKCRIGVVGSAAEAIGADEDELLEQLASFVTTVAERGGVSHFAVHARQAVLGGLSPAQNRQVPPLHYGVVERLAAALPHLSFSLNGGVEDLDAARAILLAGADSPSDGRLSGVMVGRAVVSRPWRWATADSTLYGAAADPAQSRRRLLEEYAAWGDAIEATTPQR---IRRLVLAPALNLFAGEPRGKKFRAALDTRAKDDSLGFSSLLLGAAEDVLLPETLDSAPG 398
BLAST of jgi.p|Trimin1|166585 vs. uniprot
Match: A0A7R9YB36_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YB36_9STRA) HSP 1 Score: 310 bits (795), Expect = 2.110e-99 Identity = 174/352 (49.43%), Postives = 224/352 (63.64%), Query Frame = 1
Query: 31 SLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHNADD--LDRILGYDQSCEHPVVLQLGGSDPELVRTACELARPYQYDQINLNVGCPSERVAGKGAFGAALMREPRLVADICAAMREGSGGAQTSVKCRIGVDDEDSYASLARFVDVVARGGGVSDFIVHARKAIL-KGLSPEQNRKVPPLKYDYVYRLVRDFPELSFTLNGGVTTYAGVQEALDGGAHGVMVGRAVLERPWYWSQSDSRVFG----------ATDAAL----NRRQVLQTYFEYAEGVEAEAGARWLTYRRRLLKPVWNLFHGEPGGKKFRARLDGMITQ-ERPFHAIINDALQELPPDVVDAPP 1032
S+APMM+YTDRH R++ RL +K+ V+WTEM+ +VH DD LDR L Y E P+VLQLGGSDP++VR A +A + YD++NLN GCPSERVAGKG FGAALMRE LVADI A++EG G SVKCR+GVD+ DSY FV + GV F+VHARKA+L K +PE NRK+P L+YD V RL++D P+L T+NGG+TT+ + L+ G GVM+GRA + RP+YWS+ D V+G AT +R VLQ Y YAE A+ R RR L KP+ NLF GE GK++R LD I E+ F ++ A +ELP +V+ A P
Sbjct: 70 SVAPMMDYTDRHFRFLFRLLSKETVLWTEMVTAQKVVHAPDDALLDRFLAYSPQ-EEPLVLQLGGSDPDVVRGAARIASDFGYDEVNLNCGCPSERVAGKGCFGAALMREKDLVADIMQAVQEGMPGLPASVKCRVGVDEMDSYDEFRDFVATIHERAGVEHFVVHARKALLGKKFTPEDNRKIPKLQYDRVLRLMQDMPQLRVTINGGITTFEEIDRFLEAGCSGVMIGRAAIYRPFYWSRVDELVYGRDPPESGELVATPLGQFPERSRGAVLQQYCAYAEEQLADEEIR---IRRFLGKPLQNLFAGERSGKRYRKALDENICNPEQSFSQVVWAAAKELPEEVLAALP 417 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|166585 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6099 ID=mRNA_6099|Name=jgi.p|Trimin1|166585|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1107bp|location=Sequence derived from alignment at Contig_45:518328..521630- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGGCTAAGCAGGCACGACCAGAGGTTGTCTCTGGCGCCCATGATGGAback to top protein sequence of jgi.p|Trimin1|166585 >Trimin1|166585|e_gw1.45.147.1 ID=Trimin1|166585|e_gw1.45.147.1|Name=jgi.p|Trimin1|166585|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=369bp MGLSRHDQRLSLAPMMEYTDRHMRYMLRLYTKKMVMWTEMIPIGSIVHNAback to top mRNA from alignment at Contig_45:518328..521630- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6099 ID=mRNA_6099|Name=jgi.p|Trimin1|166585|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3303bp|location=Sequence derived from alignment at Contig_45:518328..521630- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_45:518328..521630- >mRNA_6099 ID=mRNA_6099|Name=jgi.p|Trimin1|166585|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1107bp|location=Sequence derived from alignment at Contig_45:518328..521630- (Tribonema minus UTEX_B_3156 )back to top |