mRNA_5654 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: A0A835YVE8_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE8_9STRA) HSP 1 Score: 996 bits (2576), Expect = 0.000e+0 Identity = 490/490 (100.00%), Postives = 490/490 (100.00%), Query Frame = 1 Query: 79 MKVRIRSDFRREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTEDADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQWQTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIVGVLQAARRG 1548 MKVRIRSDFRREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTEDADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQWQTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIVGVLQAARRG Sbjct: 1 MKVRIRSDFRREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTEDADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQWQTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIVGVLQAARRG 490
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: A0A7S2HF49_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HF49_9STRA) HSP 1 Score: 384 bits (986), Expect = 5.080e-125 Identity = 221/476 (46.43%), Postives = 289/476 (60.71%), Query Frame = 1 Query: 106 RREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTE-DADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQWQTPLPREGPKTAKRKQETPMVVVSLD--RVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIVG 1524 R E+ LN QFA WV + L+ D L G DY + LEDRYLR GAV TFGSG+C QL G + + D V RPRIV L +++V +ACGGLH + +GRV++WGCNDD ALGR TK EEE + G V+ + A GDC + VTL GK+Y WG +KDKEGKQ+ P P+E +R Q PM++ D RVA + C AS +VAL D ++ SWG+GE+ ELGRP +K DGE YD + I +H+TP + G P+ K++GCG YH L V+ +G+ V+T GLNNYGQLG GDT+NR L EV LDG V +GG HHS+A+ A G VLA+GR+DYGQLG V AG EP P L +P AG+ V +A GANH+L +T V+TWG+ + ALGH S+ +D LPK +D +K+ E+ + ++ GGG HSAI+G Sbjct: 50 RAEYVWHQDVLNSQFADWVVRTLSKDPLASLADGGRDYIQAVKKLEDRYLRQHGAVFTFGSGECGQLAHGIDSEQDLMVRRPRIVHSLNEKQVRSIACGGLHTLTVGADGRVWSWGCNDDHALGRPTKGEEENHPGLVEGISGHVV-EAACGDCHAAVVTLDGKLYTWGSYKDKEGKQFFHP-PQETKDKVRRTQMEPMLLAIGDNSRVANIACGASFSVALLDDKTVMSWGLGEAGELGRPCGPMK-----PDGEN---YDNRCIYAEHMTPS-LCVTGNGDPLPP----MKSVGCGMYHLLVVSGSGSAVYTSGLNNYGQLGLGDTENRTKLEEVVDLDGLGVVKASGGNHHSVAMTAKGRVLAWGRADYGQLGQGAVQSSAGTFEPRPCLTKIPDGAGRVVDMACGANHNLVLTGKNRVFTWGFGESYALGHWSD-KDELLPKEMDLSKS-KELKNVSILQVSGGGCHSAILG 508
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: A0A7S2WNI2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNI2_9STRA) HSP 1 Score: 374 bits (959), Expect = 4.270e-120 Identity = 218/507 (43.00%), Postives = 298/507 (58.78%), Query Frame = 1 Query: 106 RREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQL--GLGTEDADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGR----LTKNEEEETCAG-----EVV----MRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQW------QTPLPREGPKTAKRKQETPMVVVSLDR--VAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPG-PMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTG----DTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIVGVLQAAR 1542 R EF Q+ ALN QF Q+V L L DY Y+ LE+R+LR G V FGSG+C QL G+ +ED D NV RPRIV LR + + ++ACGG+H + +GRV++WGCNDDGALGR + K E G E+V ++GE + V+ GDCQ+L VT+ G VY WGC+KD+EGK+W + P+E KT KR+Q+ PM +++L VA++ C AS N AL +DG + +WG+GE ELGRPA +K DG YD + +DH+TPG P+ A G + P A K++GCG YH V+A+G+ V++ GLN YGQLG G N++ L V +LDG V+ TGG HHS+AL G V +GR+DYGQLG + D AGG + P V+ P A +++ G NH+L +T VY+WG+ D GALGH S+ +D P+ IDF KA E + V+ GGG HSA++G + + Sbjct: 90 RVEFLRQINALNDQFGQYVADSLRGKLDHVLVDAGNDYIQYVEALEERFLRRHGEVFMFGSGECGQLAHGIDSED-DLNVDRPRIVYSLRDKHIRLLACGGIHTIAVGADGRVWSWGCNDDGALGRPSGLVDKERPELGSKGNENMPEIVAGGGLQGEQVVHVSCGDCQTLVVTVDGNVYGWGCYKDREGKKWFDSSLPPSASPQEAVKTIKRQQDVPMKILALPETMVADLCCGASFNAALLKDGRVLTWGLGEVGELGRPAAAMK-----PDGA---EYDKTGVFRDHVTPGAPVLASGEALP------AMKSVGCGMYHLFVVSASGSSVYSAGLNVYGQLGLGYVGDGLSNKDKLEAVQSLDGQGVACCTGGNHHSMALTGDGRVFTWGRADYGQLGIARADTAAGGYQASPIEVEFPAGAASVTRVSCGNNHNLVLTSKKQVYSWGFGDSGALGHASD-EDEMCPRMIDFKKAKLEH--IDVLQLAGGGQHSALLGSVTTTK 578
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: D8LKE8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE8_ECTSI) HSP 1 Score: 367 bits (941), Expect = 5.220e-118 Identity = 218/473 (46.09%), Postives = 276/473 (58.35%), Query Frame = 1 Query: 124 QVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTEDA-DKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVV--MRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQWQTPLPREGPKTAKRKQETPMVVVSLD-RVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLG-SSEVDKGAGGS-EPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIVG 1524 ++R LN +F V + LA D DLT V DY SY + + + G V G+GDC QLG GTE+ D +V PR++P L K RV V CGG+ T GRVFTWG +DDG +GRL+ + E GEV + G I +A+GDCQ++A+ LSGKVY WGC KDKEGKQW +G K K + P+V+ L VA+++C S +AL G + SWGIGE ELGR C +K+ E E YDF I +DHLTP MY + KAIGCG +H+L VT A A V+ CGLN+YGQLG GDTDNR+ L V L +V GG HSL L G + +FGR D GQLG ++ ++KG G+ E P V +P AG P K+ G NH L ITD +YTWGY + GALGHG + D LPK +D AK G +V+DADGGG HSAI+G Sbjct: 63 RMRRLNKKFKDAVQQVLARDGDTDLTYMVADYLSYSARVHQTFFADHGQVHMCGNGDCGQLGFGTEEMRDMDVKVPRLLPGLSKHRVTAVTCGGIATAALTESGRVFTWGSSDDGGIGRLSGPDAPEQFPGEVKEGLEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQAPADKGSKACKGAAKRPIVISGLPPHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGREVCSMKVPPVPGSDE-EPPYDFDGIQRDHLTPAGMYRAAEDGGARMEN--VKAIGCGDFHSLLVTRADADVYACGLNSYGQLGLGDTDNRKRLALVRDLAALNTMAVAGGGMHSLVLTTEG-LFSFGRKDSGQLGCTAAINKGDWGAFETSPMEVHLPSGAGSPRKVECGTNHCLVITDKHELYTWGYGEMGALGHGKD-VDCNLPKKVDTAKRGIT----KVLDADGGGQHSAILG 526
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: A0A7S3HMA8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMA8_9STRA) HSP 1 Score: 326 bits (836), Expect = 7.420e-103 Identity = 206/494 (41.70%), Postives = 270/494 (54.66%), Query Frame = 1 Query: 106 RREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTE-DADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQWQTPLPREGP--KTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQ--------GTS-------TPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDN--REFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVD-KGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIVG 1524 R EF + LN F +W+ E+ D + DLT G DY ++++LEDRYLRV G VLTFGSGDC QL G E D D V PR+V LR + V ++CGG+HN T G+V+TWGC DDG+LGR EE +KDKEGK+W P P K K++Q+ + + L V EV C +S N+A DG+++SWG+GE ELGR A +K+KV GE E YD +I++ H+TPGPMY GT+ + ++ KA+GCGAYH++ V G V+ CGLNNYGQLG GD D R++LT V L + ++ GG HHS+ L + G +L FGR D GQLGSS+ K AG P D+P A K V IA G NH+L +T + VY+WGY D ALGHG E +D LPK ++F K + + V GGG HSAI+G Sbjct: 1 RAEFAKHINGLNHGFYKWLQTEITKDATADLTNGFQDYVDHVTSLEDRYLRVYGEVLTFGSGDCGQLAHGMEEDEDLMVKYPRVVHSLRNKNVTGISCGGIHNAAFTETGQVYTWGCADDGSLGRPG---EESVPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKDKEGKKWFNPNPDAANPVKDIKKQQDVAIRLKGLANVVEVACGSSFNLAKCSDGAVYSWGLGECGELGRFAPPMKIKVN---GEME--YDMLSILQHHITPGPMYISSGKEGKLAGTTGVGFNQDAQLLKRVTNVKALGCGAYHSMVVVV-GDIVYACGLNNYGQLGLGDNDTEARDYLTAVPLLQNKGIVALRGGMHHSVVLSSNGKLLTFGRGDSGQLGSSQASTKSAGDFSGKPIEPDLP-ADVKVVGIACGGNHNLVLTSSNEVYSWGYGDMLALGHGQE-KDELLPKRLNFNK-NKFIKNITVTQVAGGGQHSAIIG 482
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: H3GSC6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSC6_PHYRM) HSP 1 Score: 316 bits (810), Expect = 1.320e-98 Identity = 189/478 (39.54%), Postives = 274/478 (57.32%), Query Frame = 1 Query: 109 REFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTEDADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGE---VIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQW-QTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEV-DKGAGGSEPLPRLVDVPKAAGKPV--KIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIV 1521 +E Q+ ALN FA + + A +++ + +Y +Y ++ ++ G VLTFGSGDC QLG G E+ V PR++ L ++ VACGGLH+ + G V+TWGC+DDGALGR+ +E +VV G QV GDC + VTL+GKVY WGC++DKEGKQW + P+E + K+KQ P ++ +LD V +VRC ++ N+A DG ++SWG+GE +LGR D +MK + D + E V+ ++HL P P+ PV KAIGCG++H+L T++ +++CGLNNYGQLG G T+N L V L V+ V GG+HHS+ L G V +FGR+D GQLG+ E + G P PK G V IA+G+NH L +T++ +++WGY D ALGHG+E D P+ +D+ KA E ++ + GG HSA++ Sbjct: 55 QEAARQLAALNRAFAGNLRTQWAHNKADSWAQNMKEYVAYAREIDAKFGSRAGQVLTFGSGDCGQLGHGVEEEGLMVRYPRVLRSLANLKIVRVACGGLHSAAISAAGEVYTWGCDDDGALGRVG----DENFPAKVVGFGPDQATAVQVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCDSASPKE---SFKKKQVEPFLIKALDNVVDVRCGSAFNLARTNDGRVYSWGLGEMGQLGRKV-DAEMKDSKGDYKVEMVF------REHLAPKPVMLGKDPLPV------VKAIGCGSFHSLFATSSNGYLYSCGLNNYGQLGIGSTENCTELQLVEDLSSKNVAYVDGGSHHSVVLTNDGDVYSFGRADSGQLGTLETCNTGEFKDRPQKVTTPTPKDGGSSVVRMIATGSNHVLSLTESGALFSWGYGDMLALGHGAE-HDENKPRQLDWTKA--EFGEADILQIEAGGQHSAVL 509
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: A0A1V9Z310_9STRA (Regulator of chromosome condensation (RCC1)-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z310_9STRA) HSP 1 Score: 315 bits (806), Expect = 3.390e-98 Identity = 197/468 (42.09%), Postives = 259/468 (55.34%), Query Frame = 1 Query: 133 ALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGT-EDADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQW-QTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPV---KIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIV 1521 ALN F Q + + A + S + +Y +Y+ +E R+ GAV+ FGSGDC QLG G ED D V PR+V L K+++ V CGGLH T +G V+TWGCNDDGALGR G I V GDC S+A+ + G V+ WG +KDKEGK W P P+E T K KQ TP V L VA++ C +S NVA DG ++SWG+GE +LGRP D K+R A GEY D + HLTP + G K KAIGCG+YHAL V + V+T GLNNYGQLG G N+ L V AL +V GGTH SL L A G + AFGR+D GQLG+ + + G + P+ + V KA G V +IASG+NH+L ++ +Y WGY D ALG G + +D + P+ +D+AK + R++ GG HSA++ Sbjct: 53 ALNQSFYQGIKLQHAQNLSGSWLDNMKEYVAYVREVEARFGDNCGAVMAFGSGDCGQLGHGVDEDDDMIVSVPRVVSALAKQQIVRVGCGGLHTAAVTKDGNVYTWGCNDDGALGRTGDENFPGLVTG--FPANTSIINVIGGDCHSVALAVDGSVFMWGSYKDKEGKLWCDAPTPKE---TFKNKQLTPYRVSGLANVADIACGSSFNVARTADGHVYSWGLGEMGQLGRPVSD---KIRDAAGEY----DLPLVFSQHLTPALVLLNG-------KMLLCKAIGCGSYHALFVASDSGGVYTTGLNNYGQLGLGHDANQVELQLVEALSHKVGQAVEGGTHSSLVLMADGTMYAFGRADSGQLGTIDNPE-TGAMKESPQEIVV-KAKGTRVLFDQIASGSNHALAVSTKNEIYAWGYGDMCALGTGDD-KDEYKPRLVDWAKT--KFGAARILQVAAGGQHSAVL 496
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: A0A024TW52_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW52_9STRA) HSP 1 Score: 314 bits (805), Expect = 6.200e-98 Identity = 195/479 (40.71%), Postives = 265/479 (55.32%), Query Frame = 1 Query: 97 SDFRREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTED-ADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVV--MRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQW-QTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIV 1521 S+ +R YA LN F Q + + + + + +Y SY ++ RY G +LTFGSGDC QLG G E+ D V PR + L R+ VACGGLH + T EG VFTWGCNDDGALGR+ +E G V I + GDC + AVT G V+ WG +KDKEGK W P P++ T K+KQ TP ++ +L V +++C +S N+A DG ++SWG+GE LGRP M++R ADGEY + + DHLTP + G S FG +A+G G+YH+L V ++TCGLNNYGQLG G N+ L V AL V GGTHHS+ L + G + FGR D GQLG+ + D G + P+ + VP G IA G+NH+L ++D +Y+WGY D ALG+G E +D P+ +D+AK + R++ GG HSA+V Sbjct: 55 SELKRHSYA----LNQSFYQGIKLQSSQNGKGSWLENMKEYLSYAQEIDGRYGDHRGVLLTFGSGDCGQLGHGVEEEVDMCVKFPRPIQALSMHRIVRVACGGLHTMALTHEGSVFTWGCNDDGALGRVG----DENLPGPVTGFPDNTTIVNIVGGDCHTAAVTADGSVFTWGSYKDKEGKLWCDGPTPKD---TFKKKQMTPYLLPTLANVVDIKCGSSHNLARCADGHVYSWGLGEMGNLGRPVA---MEIRDADGEY----NVSLVFNDHLTPQLVKFNGKS------FGC-RALGAGSYHSLFVANESGGIYTCGLNNYGQLGLGHDVNQTELQLVEALSSKNGLLVEGGTHHSVVLVSDGTIYTFGRGDSGQLGTLD-DPCTGVFKDSPQEIQVPGVKGFR-SIACGSNHALAVSDQDTIYSWGYGDMLALGNGVE-KDELKPRRLDWAKT--KFGDARILQVSAGGQHSAVV 503
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: D0N6R7_PHYIT (Regulator of chromosome condensation (RCC1)-like protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N6R7_PHYIT) HSP 1 Score: 315 bits (806), Expect = 7.150e-98 Identity = 196/491 (39.92%), Postives = 276/491 (56.21%), Query Frame = 1 Query: 109 REFYAQVRALNIQF-----AQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTE-DADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQW-QTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPK----AAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKA--GAEVAGMRVV-------DADGGGSHSAIV 1521 +E Q+ ALN F AQWVH +++ T + +Y SY + ++ G +LTFGSGDC QLG G E D D V P +V L K + VACGGLH+ T G VFTWGC+DDGALGR+ G + + QV GDC + VTL+GKVY WGC++DKEGKQW P ++ K+KQ P ++ +LD +A+VRC +S N+A DG ++SWG+GE +LGR D +MK + D + + VY+ DHL P P+ PV KAIGCG+YH+L ++ ++TCGLNNYGQLG G+T+N L V L V+ V GG+HHS+ L G V FGR+D GQLG E G + P+ V +PK + + I+SG+NH+L +T++ +++WGY D ALG+G + +D P +D++KA G + G ++V + GG HSA++ Sbjct: 55 QEAARQLAALNRAFLANLKAQWVH-----NKTDSWTQNMKEYISYAREINAKFGAHAGQMLTFGSGDCGQLGHGVEKDKDLMVEFPLVVRPLVKLEIVRVACGGLHSAAITSAGEVFTWGCDDDGALGRVGDENIPTKVTGFGPQQATAV-QVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCDAPSAKDA---FKKKQTEPFLIKALDNIADVRCGSSFNLARTNDGRVYSWGLGEMGQLGRTVDD-QMKDFKGDYKVDMVYN------DHLQPKPVTLGNDPLPV------VKAIGCGSYHSLFALSSNGYLYTCGLNNYGQLGIGNTENCTELQLVEDLSSKNVAYVDGGSHHSVVLTIDGDVYTFGRADSGQLGMLETCS-TGDFKDRPQKVTIPKPKDGGSRQVCMISSGSNHTLALTESNAIFSWGYGDMLALGNGVD-RDENKPYQVDWSKATNGKDKKGKKMVFGKAEFLQVEAGGQHSAVL 521
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: W4FZ97_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZ97_9STRA) HSP 1 Score: 313 bits (803), Expect = 1.230e-97 Identity = 196/485 (40.41%), Postives = 264/485 (54.43%), Query Frame = 1 Query: 79 MKVRIRSDFRREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTE-DADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVV--MRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQW-QTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIV 1521 +K + S E ALN F Q + + + + + +Y SY ++ RY G +LTFGSGDC QLG G E D D V PR V L R+A VACGGLH + T EG VFTWGCNDDGALGR+ +E G+V G I + GDC + AV + G V+ WG +KDKEGK W P P + T K+KQ TP +V +L V +V+ +S N+A DG ++SWG+GE LGRP + ++R A GEY+ + DHLTP + G + FG KA+G G+YH+L V +++CGLNNYGQLG G N+ L V AL V GGTHHS+ L G + FGR D GQLG+ + D G G + P+ + VP G +A G+NH+L +TD +Y+WGY D ALG+G E +D P+ ID+ K + +++ GG HSA+V Sbjct: 45 VKAVVASTRLTELKRHTYALNQSFYQGIKLQSSQNAKESWLENMKEYLSYAQEIDGRYGDHRGVLLTFGSGDCGQLGHGVEEDIDMCVKFPRPVQALSMHRIARVACGGLHTMALTHEGSVFTWGCNDDGALGRIG----DENLPGQVTGFPEGTTIVTIVGGDCHTTAVAVDGSVFTWGSYKDKEGKLWCDGPSPND---TFKKKQLTPYLVPTLANVVDVKSGSSHNLARCADGHVYSWGLGEMGNLGRP---VSTEIRDAHGEYK----LSVVFNDHLTPQLVKLNG------KPFGC-KALGAGSYHSLFVANDSGGIYSCGLNNYGQLGLGHDVNQTELQLVEALGSKNGLFVEGGTHHSVVLVTDGTLYTFGRGDSGQLGTLD-DPGTGAFKDSPQEIKVPGVTGFRA-VACGSNHALAVTDQDAIYSWGYGDMLALGNGVE-KDELKPRRIDWTKT--KFGAAKILQVAAGGQHSAVV 503 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_5654 ID=mRNA_5654|Name=jgi.p|Trimin1|349385|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1551bp|location=Sequence derived from alignment at Contig_42:370512..374165- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GCTGTGTGTGTGCTGCGCAATCTACCAGCATGCTCAGCGGCGGTGCCAAGback to top protein sequence of jgi.p|Trimin1|349385 >Trimin1|349385|estExt_Genemark1.C_Ctg_420055 ID=Trimin1|349385|estExt_Genemark1.C_Ctg_420055|Name=jgi.p|Trimin1|349385|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=491bp MKVRIRSDFRREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYback to top mRNA from alignment at Contig_42:370512..374165- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_5654 ID=mRNA_5654|Name=jgi.p|Trimin1|349385|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3654bp|location=Sequence derived from alignment at Contig_42:370512..374165- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_42:370512..374165- >mRNA_5654 ID=mRNA_5654|Name=jgi.p|Trimin1|349385|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1473bp|location=Sequence derived from alignment at Contig_42:370512..374165- (Tribonema minus UTEX_B_3156 )back to top |