mRNA_5654 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349385
Unique NamemRNA_5654
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: A0A835YVE8_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE8_9STRA)

HSP 1 Score: 996 bits (2576), Expect = 0.000e+0
Identity = 490/490 (100.00%), Postives = 490/490 (100.00%), Query Frame = 1
Query:   79 MKVRIRSDFRREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTEDADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQWQTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIVGVLQAARRG 1548
            MKVRIRSDFRREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTEDADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQWQTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIVGVLQAARRG
Sbjct:    1 MKVRIRSDFRREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTEDADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQWQTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIVGVLQAARRG 490          
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: A0A7S2HF49_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HF49_9STRA)

HSP 1 Score: 384 bits (986), Expect = 5.080e-125
Identity = 221/476 (46.43%), Postives = 289/476 (60.71%), Query Frame = 1
Query:  106 RREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTE-DADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQWQTPLPREGPKTAKRKQETPMVVVSLD--RVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIVG 1524
            R E+      LN QFA WV + L+ D    L  G  DY   +  LEDRYLR  GAV TFGSG+C QL  G + + D  V RPRIV  L +++V  +ACGGLH +    +GRV++WGCNDD ALGR TK EEE        + G V+ + A GDC +  VTL GK+Y WG +KDKEGKQ+  P P+E     +R Q  PM++   D  RVA + C AS +VAL  D ++ SWG+GE+ ELGRP   +K      DGE    YD + I  +H+TP  +   G   P+       K++GCG YH L V+ +G+ V+T GLNNYGQLG GDT+NR  L EV  LDG  V   +GG HHS+A+ A G VLA+GR+DYGQLG   V   AG  EP P L  +P  AG+ V +A GANH+L +T    V+TWG+ +  ALGH S+ +D  LPK +D +K+  E+  + ++   GGG HSAI+G
Sbjct:   50 RAEYVWHQDVLNSQFADWVVRTLSKDPLASLADGGRDYIQAVKKLEDRYLRQHGAVFTFGSGECGQLAHGIDSEQDLMVRRPRIVHSLNEKQVRSIACGGLHTLTVGADGRVWSWGCNDDHALGRPTKGEEENHPGLVEGISGHVV-EAACGDCHAAVVTLDGKLYTWGSYKDKEGKQFFHP-PQETKDKVRRTQMEPMLLAIGDNSRVANIACGASFSVALLDDKTVMSWGLGEAGELGRPCGPMK-----PDGEN---YDNRCIYAEHMTPS-LCVTGNGDPLPP----MKSVGCGMYHLLVVSGSGSAVYTSGLNNYGQLGLGDTENRTKLEEVVDLDGLGVVKASGGNHHSVAMTAKGRVLAWGRADYGQLGQGAVQSSAGTFEPRPCLTKIPDGAGRVVDMACGANHNLVLTGKNRVFTWGFGESYALGHWSD-KDELLPKEMDLSKS-KELKNVSILQVSGGGCHSAILG 508          
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: A0A7S2WNI2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNI2_9STRA)

HSP 1 Score: 374 bits (959), Expect = 4.270e-120
Identity = 218/507 (43.00%), Postives = 298/507 (58.78%), Query Frame = 1
Query:  106 RREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQL--GLGTEDADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGR----LTKNEEEETCAG-----EVV----MRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQW------QTPLPREGPKTAKRKQETPMVVVSLDR--VAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPG-PMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTG----DTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIVGVLQAAR 1542
            R EF  Q+ ALN QF Q+V   L       L     DY  Y+  LE+R+LR  G V  FGSG+C QL  G+ +ED D NV RPRIV  LR + + ++ACGG+H +    +GRV++WGCNDDGALGR    + K   E    G     E+V    ++GE +  V+ GDCQ+L VT+ G VY WGC+KD+EGK+W       +  P+E  KT KR+Q+ PM +++L    VA++ C AS N AL +DG + +WG+GE  ELGRPA  +K      DG     YD   + +DH+TPG P+ A G + P      A K++GCG YH   V+A+G+ V++ GLN YGQLG G       N++ L  V +LDG  V+  TGG HHS+AL   G V  +GR+DYGQLG +  D  AGG +  P  V+ P  A    +++ G NH+L +T    VY+WG+ D GALGH S+ +D   P+ IDF KA  E   + V+   GGG HSA++G +   +
Sbjct:   90 RVEFLRQINALNDQFGQYVADSLRGKLDHVLVDAGNDYIQYVEALEERFLRRHGEVFMFGSGECGQLAHGIDSED-DLNVDRPRIVYSLRDKHIRLLACGGIHTIAVGADGRVWSWGCNDDGALGRPSGLVDKERPELGSKGNENMPEIVAGGGLQGEQVVHVSCGDCQTLVVTVDGNVYGWGCYKDREGKKWFDSSLPPSASPQEAVKTIKRQQDVPMKILALPETMVADLCCGASFNAALLKDGRVLTWGLGEVGELGRPAAAMK-----PDGA---EYDKTGVFRDHVTPGAPVLASGEALP------AMKSVGCGMYHLFVVSASGSSVYSAGLNVYGQLGLGYVGDGLSNKDKLEAVQSLDGQGVACCTGGNHHSMALTGDGRVFTWGRADYGQLGIARADTAAGGYQASPIEVEFPAGAASVTRVSCGNNHNLVLTSKKQVYSWGFGDSGALGHASD-EDEMCPRMIDFKKAKLEH--IDVLQLAGGGQHSALLGSVTTTK 578          
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: D8LKE8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE8_ECTSI)

HSP 1 Score: 367 bits (941), Expect = 5.220e-118
Identity = 218/473 (46.09%), Postives = 276/473 (58.35%), Query Frame = 1
Query:  124 QVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTEDA-DKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVV--MRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQWQTPLPREGPKTAKRKQETPMVVVSLD-RVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLG-SSEVDKGAGGS-EPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIVG 1524
            ++R LN +F   V + LA D   DLT  V DY SY + +   +    G V   G+GDC QLG GTE+  D +V  PR++P L K RV  V CGG+     T  GRVFTWG +DDG +GRL+  +  E   GEV   + G  I  +A+GDCQ++A+ LSGKVY WGC KDKEGKQW      +G K  K   + P+V+  L   VA+++C  S  +AL   G + SWGIGE  ELGR  C +K+       E E  YDF  I +DHLTP  MY          +    KAIGCG +H+L VT A A V+ CGLN+YGQLG GDTDNR+ L  V  L      +V GG  HSL L   G + +FGR D GQLG ++ ++KG  G+ E  P  V +P  AG P K+  G NH L ITD   +YTWGY + GALGHG +  D  LPK +D AK G      +V+DADGGG HSAI+G
Sbjct:   63 RMRRLNKKFKDAVQQVLARDGDTDLTYMVADYLSYSARVHQTFFADHGQVHMCGNGDCGQLGFGTEEMRDMDVKVPRLLPGLSKHRVTAVTCGGIATAALTESGRVFTWGSSDDGGIGRLSGPDAPEQFPGEVKEGLEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQAPADKGSKACKGAAKRPIVISGLPPHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGREVCSMKVPPVPGSDE-EPPYDFDGIQRDHLTPAGMYRAAEDGGARMEN--VKAIGCGDFHSLLVTRADADVYACGLNSYGQLGLGDTDNRKRLALVRDLAALNTMAVAGGGMHSLVLTTEG-LFSFGRKDSGQLGCTAAINKGDWGAFETSPMEVHLPSGAGSPRKVECGTNHCLVITDKHELYTWGYGEMGALGHGKD-VDCNLPKKVDTAKRGIT----KVLDADGGGQHSAILG 526          
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: A0A7S3HMA8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMA8_9STRA)

HSP 1 Score: 326 bits (836), Expect = 7.420e-103
Identity = 206/494 (41.70%), Postives = 270/494 (54.66%), Query Frame = 1
Query:  106 RREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTE-DADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQWQTPLPREGP--KTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQ--------GTS-------TPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDN--REFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVD-KGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIVG 1524
            R EF   +  LN  F +W+  E+  D + DLT G  DY  ++++LEDRYLRV G VLTFGSGDC QL  G E D D  V  PR+V  LR + V  ++CGG+HN   T  G+V+TWGC DDG+LGR     EE                                      +KDKEGK+W  P P      K  K++Q+  + +  L  V EV C +S N+A   DG+++SWG+GE  ELGR A  +K+KV    GE E  YD  +I++ H+TPGPMY          GT+         + ++    KA+GCGAYH++ V   G  V+ CGLNNYGQLG GD D   R++LT V  L    + ++ GG HHS+ L + G +L FGR D GQLGSS+   K AG     P   D+P A  K V IA G NH+L +T +  VY+WGY D  ALGHG E +D  LPK ++F K    +  + V    GGG HSAI+G
Sbjct:    1 RAEFAKHINGLNHGFYKWLQTEITKDATADLTNGFQDYVDHVTSLEDRYLRVYGEVLTFGSGDCGQLAHGMEEDEDLMVKYPRVVHSLRNKNVTGISCGGIHNAAFTETGQVYTWGCADDGSLGRPG---EESVPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKDKEGKKWFNPNPDAANPVKDIKKQQDVAIRLKGLANVVEVACGSSFNLAKCSDGAVYSWGLGECGELGRFAPPMKIKVN---GEME--YDMLSILQHHITPGPMYISSGKEGKLAGTTGVGFNQDAQLLKRVTNVKALGCGAYHSMVVVV-GDIVYACGLNNYGQLGLGDNDTEARDYLTAVPLLQNKGIVALRGGMHHSVVLSSNGKLLTFGRGDSGQLGSSQASTKSAGDFSGKPIEPDLP-ADVKVVGIACGGNHNLVLTSSNEVYSWGYGDMLALGHGQE-KDELLPKRLNFNK-NKFIKNITVTQVAGGGQHSAIIG 482          
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: H3GSC6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSC6_PHYRM)

HSP 1 Score: 316 bits (810), Expect = 1.320e-98
Identity = 189/478 (39.54%), Postives = 274/478 (57.32%), Query Frame = 1
Query:  109 REFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTEDADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGE---VIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQW-QTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEV-DKGAGGSEPLPRLVDVPKAAGKPV--KIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIV 1521
            +E   Q+ ALN  FA  +  + A +++      + +Y +Y   ++ ++    G VLTFGSGDC QLG G E+    V  PR++  L   ++  VACGGLH+   +  G V+TWGC+DDGALGR+     +E    +VV  G       QV  GDC +  VTL+GKVY WGC++DKEGKQW  +  P+E   + K+KQ  P ++ +LD V +VRC ++ N+A   DG ++SWG+GE  +LGR   D +MK  + D + E V+      ++HL P P+       PV       KAIGCG++H+L  T++   +++CGLNNYGQLG G T+N   L  V  L    V+ V GG+HHS+ L   G V +FGR+D GQLG+ E  + G     P       PK  G  V   IA+G+NH L +T++  +++WGY D  ALGHG+E  D   P+ +D+ KA  E     ++  + GG HSA++
Sbjct:   55 QEAARQLAALNRAFAGNLRTQWAHNKADSWAQNMKEYVAYAREIDAKFGSRAGQVLTFGSGDCGQLGHGVEEEGLMVRYPRVLRSLANLKIVRVACGGLHSAAISAAGEVYTWGCDDDGALGRVG----DENFPAKVVGFGPDQATAVQVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCDSASPKE---SFKKKQVEPFLIKALDNVVDVRCGSAFNLARTNDGRVYSWGLGEMGQLGRKV-DAEMKDSKGDYKVEMVF------REHLAPKPVMLGKDPLPV------VKAIGCGSFHSLFATSSNGYLYSCGLNNYGQLGIGSTENCTELQLVEDLSSKNVAYVDGGSHHSVVLTNDGDVYSFGRADSGQLGTLETCNTGEFKDRPQKVTTPTPKDGGSSVVRMIATGSNHVLSLTESGALFSWGYGDMLALGHGAE-HDENKPRQLDWTKA--EFGEADILQIEAGGQHSAVL 509          
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: A0A1V9Z310_9STRA (Regulator of chromosome condensation (RCC1)-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z310_9STRA)

HSP 1 Score: 315 bits (806), Expect = 3.390e-98
Identity = 197/468 (42.09%), Postives = 259/468 (55.34%), Query Frame = 1
Query:  133 ALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGT-EDADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQW-QTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPV---KIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIV 1521
            ALN  F Q +  + A + S      + +Y +Y+  +E R+    GAV+ FGSGDC QLG G  ED D  V  PR+V  L K+++  V CGGLH    T +G V+TWGCNDDGALGR           G        I  V  GDC S+A+ + G V+ WG +KDKEGK W   P P+E   T K KQ TP  V  L  VA++ C +S NVA   DG ++SWG+GE  +LGRP  D   K+R A GEY    D   +   HLTP  +   G       K    KAIGCG+YHAL V +    V+T GLNNYGQLG G   N+  L  V AL      +V GGTH SL L A G + AFGR+D GQLG+ +  +  G  +  P+ + V KA G  V   +IASG+NH+L ++    +Y WGY D  ALG G + +D + P+ +D+AK   +    R++    GG HSA++
Sbjct:   53 ALNQSFYQGIKLQHAQNLSGSWLDNMKEYVAYVREVEARFGDNCGAVMAFGSGDCGQLGHGVDEDDDMIVSVPRVVSALAKQQIVRVGCGGLHTAAVTKDGNVYTWGCNDDGALGRTGDENFPGLVTG--FPANTSIINVIGGDCHSVALAVDGSVFMWGSYKDKEGKLWCDAPTPKE---TFKNKQLTPYRVSGLANVADIACGSSFNVARTADGHVYSWGLGEMGQLGRPVSD---KIRDAAGEY----DLPLVFSQHLTPALVLLNG-------KMLLCKAIGCGSYHALFVASDSGGVYTTGLNNYGQLGLGHDANQVELQLVEALSHKVGQAVEGGTHSSLVLMADGTMYAFGRADSGQLGTIDNPE-TGAMKESPQEIVV-KAKGTRVLFDQIASGSNHALAVSTKNEIYAWGYGDMCALGTGDD-KDEYKPRLVDWAKT--KFGAARILQVAAGGQHSAVL 496          
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: A0A024TW52_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW52_9STRA)

HSP 1 Score: 314 bits (805), Expect = 6.200e-98
Identity = 195/479 (40.71%), Postives = 265/479 (55.32%), Query Frame = 1
Query:   97 SDFRREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTED-ADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVV--MRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQW-QTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIV 1521
            S+ +R  YA    LN  F Q +  + + +        + +Y SY   ++ RY    G +LTFGSGDC QLG G E+  D  V  PR +  L   R+  VACGGLH +  T EG VFTWGCNDDGALGR+     +E   G V        I  +  GDC + AVT  G V+ WG +KDKEGK W   P P++   T K+KQ TP ++ +L  V +++C +S N+A   DG ++SWG+GE   LGRP     M++R ADGEY    +   +  DHLTP  +   G S      FG  +A+G G+YH+L V      ++TCGLNNYGQLG G   N+  L  V AL       V GGTHHS+ L + G +  FGR D GQLG+ + D   G  +  P+ + VP   G    IA G+NH+L ++D   +Y+WGY D  ALG+G E +D   P+ +D+AK   +    R++    GG HSA+V
Sbjct:   55 SELKRHSYA----LNQSFYQGIKLQSSQNGKGSWLENMKEYLSYAQEIDGRYGDHRGVLLTFGSGDCGQLGHGVEEEVDMCVKFPRPIQALSMHRIVRVACGGLHTMALTHEGSVFTWGCNDDGALGRVG----DENLPGPVTGFPDNTTIVNIVGGDCHTAAVTADGSVFTWGSYKDKEGKLWCDGPTPKD---TFKKKQMTPYLLPTLANVVDIKCGSSHNLARCADGHVYSWGLGEMGNLGRPVA---MEIRDADGEY----NVSLVFNDHLTPQLVKFNGKS------FGC-RALGAGSYHSLFVANESGGIYTCGLNNYGQLGLGHDVNQTELQLVEALSSKNGLLVEGGTHHSVVLVSDGTIYTFGRGDSGQLGTLD-DPCTGVFKDSPQEIQVPGVKGFR-SIACGSNHALAVSDQDTIYSWGYGDMLALGNGVE-KDELKPRRLDWAKT--KFGDARILQVSAGGQHSAVV 503          
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: D0N6R7_PHYIT (Regulator of chromosome condensation (RCC1)-like protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N6R7_PHYIT)

HSP 1 Score: 315 bits (806), Expect = 7.150e-98
Identity = 196/491 (39.92%), Postives = 276/491 (56.21%), Query Frame = 1
Query:  109 REFYAQVRALNIQF-----AQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTE-DADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQW-QTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPK----AAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKA--GAEVAGMRVV-------DADGGGSHSAIV 1521
            +E   Q+ ALN  F     AQWVH     +++   T  + +Y SY   +  ++    G +LTFGSGDC QLG G E D D  V  P +V  L K  +  VACGGLH+   T  G VFTWGC+DDGALGR+          G    +   + QV  GDC +  VTL+GKVY WGC++DKEGKQW   P  ++     K+KQ  P ++ +LD +A+VRC +S N+A   DG ++SWG+GE  +LGR   D +MK  + D + + VY+      DHL P P+       PV       KAIGCG+YH+L   ++   ++TCGLNNYGQLG G+T+N   L  V  L    V+ V GG+HHS+ L   G V  FGR+D GQLG  E     G  +  P+ V +PK     + +   I+SG+NH+L +T++  +++WGY D  ALG+G + +D   P  +D++KA  G +  G ++V         + GG HSA++
Sbjct:   55 QEAARQLAALNRAFLANLKAQWVH-----NKTDSWTQNMKEYISYAREINAKFGAHAGQMLTFGSGDCGQLGHGVEKDKDLMVEFPLVVRPLVKLEIVRVACGGLHSAAITSAGEVFTWGCDDDGALGRVGDENIPTKVTGFGPQQATAV-QVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCDAPSAKDA---FKKKQTEPFLIKALDNIADVRCGSSFNLARTNDGRVYSWGLGEMGQLGRTVDD-QMKDFKGDYKVDMVYN------DHLQPKPVTLGNDPLPV------VKAIGCGSYHSLFALSSNGYLYTCGLNNYGQLGIGNTENCTELQLVEDLSSKNVAYVDGGSHHSVVLTIDGDVYTFGRADSGQLGMLETCS-TGDFKDRPQKVTIPKPKDGGSRQVCMISSGSNHTLALTESNAIFSWGYGDMLALGNGVD-RDENKPYQVDWSKATNGKDKKGKKMVFGKAEFLQVEAGGQHSAVL 521          
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Match: W4FZ97_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZ97_9STRA)

HSP 1 Score: 313 bits (803), Expect = 1.230e-97
Identity = 196/485 (40.41%), Postives = 264/485 (54.43%), Query Frame = 1
Query:   79 MKVRIRSDFRREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSYISTLEDRYLRVPGAVLTFGSGDCNQLGLGTE-DADKNVPRPRIVPFLRKERVAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVV--MRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQW-QTPLPREGPKTAKRKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIV 1521
            +K  + S    E      ALN  F Q +  + + +        + +Y SY   ++ RY    G +LTFGSGDC QLG G E D D  V  PR V  L   R+A VACGGLH +  T EG VFTWGCNDDGALGR+     +E   G+V     G  I  +  GDC + AV + G V+ WG +KDKEGK W   P P +   T K+KQ TP +V +L  V +V+  +S N+A   DG ++SWG+GE   LGRP   +  ++R A GEY+       +  DHLTP  +   G      + FG  KA+G G+YH+L V      +++CGLNNYGQLG G   N+  L  V AL       V GGTHHS+ L   G +  FGR D GQLG+ + D G G  +  P+ + VP   G    +A G+NH+L +TD   +Y+WGY D  ALG+G E +D   P+ ID+ K   +    +++    GG HSA+V
Sbjct:   45 VKAVVASTRLTELKRHTYALNQSFYQGIKLQSSQNAKESWLENMKEYLSYAQEIDGRYGDHRGVLLTFGSGDCGQLGHGVEEDIDMCVKFPRPVQALSMHRIARVACGGLHTMALTHEGSVFTWGCNDDGALGRIG----DENLPGQVTGFPEGTTIVTIVGGDCHTTAVAVDGSVFTWGSYKDKEGKLWCDGPSPND---TFKKKQLTPYLVPTLANVVDVKSGSSHNLARCADGHVYSWGLGEMGNLGRP---VSTEIRDAHGEYK----LSVVFNDHLTPQLVKLNG------KPFGC-KALGAGSYHSLFVANDSGGIYSCGLNNYGQLGLGHDVNQTELQLVEALGSKNGLFVEGGTHHSVVLVTDGTLYTFGRGDSGQLGTLD-DPGTGAFKDSPQEIKVPGVTGFRA-VACGSNHALAVTDQDAIYSWGYGDMLALGNGVE-KDELKPRRIDWTKT--KFGAAKILQVAAGGQHSAVV 503          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349385 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVE8_9STRA0.000e+0100.00Regulator of chromosome condensation 1/beta-lactam... [more]
A0A7S2HF49_9STRA5.080e-12546.43Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2WNI2_9STRA4.270e-12043.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D8LKE8_ECTSI5.220e-11846.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3HMA8_9STRA7.420e-10341.70Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
H3GSC6_PHYRM1.320e-9839.54Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A1V9Z310_9STRA3.390e-9842.09Regulator of chromosome condensation (RCC1)-like p... [more]
A0A024TW52_9STRA6.200e-9840.71Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
D0N6R7_PHYIT7.150e-9839.92Regulator of chromosome condensation (RCC1)-like p... [more]
W4FZ97_9STRA1.230e-9740.41Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_42contigContig_42:370512..374165 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349385|estExt_Genemark1.C_Ctg_420055
BRITEko00000,ko03019,ko03036
KEGG koko:K11493
GOsGO:0000054,GO:0000082,GO:0000226,GO:0000228,GO:0000278,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0005085,GO:0005087,GO:0005088,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005737,GO:0005819,GO:0005856,GO:0006403,GO:0006405,GO:0006406,GO:0006407,GO:0006606,GO:0006607,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007088,GO:0007096,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0007346,GO:0007399,GO:0007417,GO:0008104,GO:0008150,GO:0008152,GO:0008536,GO:0009790,GO:0009792,GO:0009987,GO:0010389,GO:0010467,GO:0010564,GO:0010948,GO:0010972,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0015931,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0016973,GO:0017016,GO:0017038,GO:0019899,GO:0022008,GO:0022402,GO:0022607,GO:0022613,GO:0023052,GO:0030154,GO:0031090,GO:0031224,GO:0031267,GO:0031291,GO:0031490,GO:0031491,GO:0031492,GO:0031503,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032386,GO:0032388,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032886,GO:0032887,GO:0032888,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0033157,GO:0033365,GO:0033750,GO:0034504,GO:0034613,GO:0035556,GO:0042254,GO:0042393,GO:0042886,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044087,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0044877,GO:0045184,GO:0045595,GO:0045786,GO:0045930,GO:0046822,GO:0046824,GO:0046825,GO:0046827,GO:0046907,GO:0046982,GO:0046983,GO:0048518,GO:0048519,GO:0048523,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050657,GO:0050658,GO:0050767,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051028,GO:0051029,GO:0051049,GO:0051050,GO:0051128,GO:0051168,GO:0051169,GO:0051170,GO:0051179,GO:0051222,GO:0051223,GO:0051225,GO:0051233,GO:0051234,GO:0051236,GO:0051239,GO:0051259,GO:0051262,GO:0051290,GO:0051291,GO:0051493,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051960,GO:0051983,GO:0060236,GO:0060284,GO:0060341,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070201,GO:0070507,GO:0070727,GO:0070925,GO:0071166,GO:0071426,GO:0071427,GO:0071428,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072686,GO:0090087,GO:0090169,GO:0090224,GO:0090316,GO:0097064,GO:0097159,GO:0098772,GO:1901363,GO:1901673,GO:1901681,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902115,GO:1902749,GO:1902750,GO:1902850,GO:1903047,GO:1903827,GO:1903829,GO:1904951,GO:1990023,GO:2000026
Preferred nameRCC1
Descriptionguanyl-nucleotide exchange factor activity
COG categoryDZ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5184@1|root,KOG1426@2759|Eukaryota
Evalue3.64e-119
Seed ortholog2880.D8LKE8
Hectar predicted targeting categoryother localisation
TranscriptId349707
TrackFilteredModels1
ProteinId349385
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349385gene_5654Tribonema minus UTEX_B_3156 geneContig_42 370512..374165 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349385Trimin1|349385|estExt_Genemark1.C_Ctg_420055Tribonema minus UTEX_B_3156 polypeptideContig_42 370512..374087 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5654_5exon_5654_5Tribonema minus UTEX_B_3156 exonContig_42 370512..371219 -
exon_5654_4exon_5654_4Tribonema minus UTEX_B_3156 exonContig_42 371801..371924 -
exon_5654_3exon_5654_3Tribonema minus UTEX_B_3156 exonContig_42 372319..372491 -
exon_5654_2exon_5654_2Tribonema minus UTEX_B_3156 exonContig_42 373079..373529 -
exon_5654_1exon_5654_1Tribonema minus UTEX_B_3156 exonContig_42 374071..374165 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5654CDS_5654Tribonema minus UTEX_B_3156 CDSContig_42 374071..374087 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_5654UTR5_5654Tribonema minus UTEX_B_3156 five_prime_UTRContig_42 374088..374165 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5654 ID=mRNA_5654|Name=jgi.p|Trimin1|349385|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1551bp|location=Sequence derived from alignment at Contig_42:370512..374165- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCTGTGTGTGTGCTGCGCAATCTACCAGCATGCTCAGCGGCGGTGCCAAG
TCCAAACGAAAGCGGACCGCCGTTGACAATGAAGGTCCGGATTCGGTCCG
ACTTCCGCCGCGAATTCTACGCGCAAGTCCGCGCGCTCAACATCCAGTTC
GCGCAATGGGTGCACAAGGAACTGGCCGCAGACCGCTCCGTAGACCTGAC
CCCGGGGGTCATAGACTACAACAGTTACATCTCCACGCTCGAGGACCGAT
ACCTGAGGGTCCCTGGCGCGGTGCTGACGTTCGGCAGCGGCGACTGCAAC
CAGCTGGGGCTGGGGACGGAGGATGCGGACAAGAACGTGCCGCGCCCCAG
GATCGTTCCGTTCCTGAGGAAGGAGCGCGTGGCGATGGTGGCGTGCGGCG
GCCTGCACAACGTGGTGTGCACCATGGAGGGGCGCGTGTTCACGTGGGGC
TGCAACGACGACGGCGCGCTGGGGCGGCTGACCAAAAATGAGGAGGAGGA
GACGTGCGCGGGGGAGGTGGTGATGCGGGGCGAGGTCATTAGACAGGTGG
CAGCAGGCGACTGCCAGAGCTTGGCTGTCACGCTGAGTGGCAAGGTGTAT
GCATGGGGCTGCCACAAGGATAAGGAAGGGAAGCAGTGGCAAACTCCGCT
GCCGAGGGAGGGGCCCAAGACAGCAAAGCGCAAGCAGGAGACGCCCATGG
TCGTTGTGAGTCTTGACAGAGTGGCGGAGGTGCGGTGCTGTGCTTCAGCC
AATGTGGCCCTGCGCCAGGATGGGAGCCTCTGGTCCTGGGGGATAGGAGA
GTCTTCGGAACTTGGGCGGCCCGCATGTGACCTGAAAATGAAGGTTCGAC
AAGCCGACGGCGAGTACGAAGACGTGTACGACTTCAAGAACATAGTCAAG
GACCACCTCACGCCCGGCCCCATGTACGCCCAGGGCACCAGCACGCCTGT
CCACCAGAAGTTCGGCGCGTTCAAGGCCATCGGCTGCGGCGCGTACCACG
CACTGGCCGTGACCGCCGCGGGCGCGCGCGTCTTCACGTGCGGTCTCAAC
AACTACGGCCAGCTCGGCACTGGCGATACCGACAACCGCGAGTTCTTGAC
GGAGGTCACTGCGCTCGACGGCTGGGCGGTTTCGTCCGTAACCGGCGGGA
CGCACCACTCGCTGGCGTTGTGCGCGACGGGCGCGGTGCTGGCCTTTGGC
CGCAGCGACTACGGTCAGCTGGGGTCCTCGGAAGTGGACAAGGGGGCGGG
GGGGTCGGAGCCCCTGCCGCGCCTGGTCGACGTGCCGAAGGCGGCGGGGA
AGCCCGTGAAGATTGCCTCCGGCGCGAACCACTCCCTGTGCATCACCGAC
GCGTGCGGGGTGTACACGTGGGGGTACTCGGACGAGGGCGCGCTCGGGCA
CGGCAGCGAGGGGCAGGACGTCTGGCTGCCCAAGGCGATAGACTTTGCGA
AGGCGGGCGCGGAGGTGGCAGGGATGCGCGTTGTGGACGCCGACGGGGGG
GGCTCGCACAGCGCGATCGTGGGGGTGCTGCAAGCCGCGCGGCGGGGGTG
A
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protein sequence of jgi.p|Trimin1|349385

>Trimin1|349385|estExt_Genemark1.C_Ctg_420055 ID=Trimin1|349385|estExt_Genemark1.C_Ctg_420055|Name=jgi.p|Trimin1|349385|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=491bp
MKVRIRSDFRREFYAQVRALNIQFAQWVHKELAADRSVDLTPGVIDYNSY
ISTLEDRYLRVPGAVLTFGSGDCNQLGLGTEDADKNVPRPRIVPFLRKER
VAMVACGGLHNVVCTMEGRVFTWGCNDDGALGRLTKNEEEETCAGEVVMR
GEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQWQTPLPREGPKTAK
RKQETPMVVVSLDRVAEVRCCASANVALRQDGSLWSWGIGESSELGRPAC
DLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKA
IGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWA
VSSVTGGTHHSLALCATGAVLAFGRSDYGQLGSSEVDKGAGGSEPLPRLV
DVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWL
PKAIDFAKAGAEVAGMRVVDADGGGSHSAIVGVLQAARRG*
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mRNA from alignment at Contig_42:370512..374165-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5654 ID=mRNA_5654|Name=jgi.p|Trimin1|349385|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3654bp|location=Sequence derived from alignment at Contig_42:370512..374165- (Tribonema minus UTEX_B_3156 )
GCTGTGTGTGTGCTGCGCAATCTACCAGCATGCTCAGCGGCGGTGCCAAG TCCAAACGAAAGCGGACCGCCGTTGACAATGAAGGTCCGGATTCGGTGAG TGGCTTCCCCAGATGGCAGATGGCAGTTCGCGTTTTATCGTTTTATCAAG TCATGCCTCCGTGCGCTGGCGTACTTCGACATTCAGCAATTCTTGGTAAG CTTTCAAGTAATAGGTACATCTACCACCATTGGATCTCAAGCTGTGGGAA GATCAGATGCAACATTTATGTTGGCGCCTTGCTCAGCGTTTGCCCGACAC GAGGCCTCGTCTTCAGTACGCTCACGGTGAACAGGTCCATACTTCGATGC CAGCGCACCTCCCATCAACCTCGAAGTTTGTGCAATTTCATTGCAACTCC TAAATTCATTGGAGGTGCGCCTAAGAACAAGTGCGGACCTCCTCTCTGTC GCGGCGTCAAATGCTCAACCACTTGCTCACGTGCCTCTGCGCTTTGCCCT TCTGCTCGCTGCCTATGAAATCATCCTCCCATTCTCTTCCCGTCCCCTTC CTTACTCCCCAATATGAGCAGCTTGGCGCACTGGTCAGGGCAGGCGCACC GGCGCACTCCAAGCACGCTCTAGCTCGCAACAGCAGGTCCGACTTCCGCC GCGAATTCTACGCGCAAGTCCGCGCGCTCAACATCCAGTTCGCGCAATGG GTGCACAAGGAACTGGCCGCAGACCGCTCCGTAGACCTGACCCCGGGGGT CATAGACTACAACAGTTACATCTCCACGCTCGAGGACCGATACCTGAGGG TCCCTGGCGCGGTGCTGACGTTCGGCAGCGGCGACTGCAACCAGCTGGGG CTGGGGACGGAGGATGCGGACAAGAACGTGCCGCGCCCCAGGATCGTTCC GTTCCTGAGGAAGGAGCGCGTGGCGATGGTGGCGTGCGGCGGCCTGCACA ACGTGGTGTGCACCATGGAGGGGCGCGTGTTCACGTGGGGCTGCAACGAC GACGGCGCGCTGGGGCGGCTGACCAAAAATGAGGAGGAGGAGACGTGCGC GGGGGAGGTGGTGATGCGGGGCGAGGTCATTAGACAGGTCAGTGCTCAGG ACCCGTATACTGTAGGTATGTGCATGCGCTGCGGGTGGTGCCGCATAATG GCACCTTGTGATAGCCCTGGCATGCATCTCTGTATGCCAACAGGTAATCA GACATGCGCTCATGTTGCGCCAGGTATGCCGACTCTTAGACCTGGAAGCG CGATTCTTTGAAAGGTTATGTAGCCTGGGGTCGCTGGGCAACCAATCATG CGGCGTGATGTGTTGGCAGCCTGACAGAGGCTTGTCCTCATCACCAATTC TTGACGTGTGACAGTCAGTGGCGCTGCATGATATCTGGCTCCTGATATAC AGCAAGGTCTTATGCTACAGGATATGTGTACTGCTGCAGCTGCATGCAAA TGGGACCGTTCCGCACTCTGCCATCATGCACAATGCTGACATTGGCCTGA CATTTATGCTGACATAGTGCTGACATTGGCCTGGCATTGTGCACAGCCTG CCAAATCGCATGCGCTGACACGTGATGCCGGCACCAGAGCACGCATTGAA TGCGATGCAGTCAGCCACACAGCCTCGCTACCGGGAACTCAAGTCAACTC CGCATTGTTACTGCAACTCTGCAGGTGGCAGCAGGCGACTGCCAGAGCTT GGCTGTCACGCTGAGTGGCAAGGTGTATGCATGGGGCTGCCACAAGGATA AGGAAGGGAAGCAGTGGCAAACTCCGCTGCCGAGGGAGGGGCCCAAGACA GCAAAGCGCAAGCAGGAGACGCCCATGGTCGTTGTGAGTCTTGACAGGTA AGGCTACGACTACTCACACACACCTTCAAGTGCAACACGAGGTCTTCTTT CGAGGTGAATGTTGGTTTTGAGGAATGACTTCGTTTTGCCCACTCTGGTG CTTCAGGAAAGCTCAATGCTCAGAATTTTACTACTGTAGTGACTTTTTTA TTGAGTGCATCGTGCCATAACTATTCTGTCTACCACTGGCGGCTGTCACT ACCTTTGTTTGACAGCTTGCAGCAAAGTGCCATGAAACACAATCTACTTA ACTCCATCCGCAATCTACTGCAAGTCCAGTCCTCATCGCTACCATACTTG TCGTACTTTTGTGGGTTCCCGCCCTGATCACCATTCATACGTCAAGAGAC AGAACTCATATTTGGCTACTATCCCCCGTCCCTTGTGCCAGAGTGGCGGA GGTGCGGTGCTGTGCTTCAGCCAATGTGGCCCTGCGCCAGGATGGGAGCC TCTGGTCCTGGGGGATAGGAGAGTCTTCGGAACTTGGGCGGCCCGCATGT GACCTGAAAATGAAGGCAAGACAAAGTTGAAGTTTGACGCACTGACGCCG GCCATGGTGATACACGTGGTTGTGTGTGCCTAGTTCACACGTGAAGCACA TTTGTAATGTGTGTTTTTAGGTACTCCGCGTGCACTCAAGTTGAAGCATT TGTGCGACTTGAAGCACCTGAACGAAAGTTTGCTTGTTCAGCAGCGTGTG GTCACACATCCACTTGCTGCTGCTGATATCATGATTGCATGGCAGCTAAA GTATACGTTGAGTAGGCAACAGGTACCGCATGACTACAAGCAGCTGATGT GCACTCACTTGAGCAGTGCCACGCATAAACAAGCAGCAACCATATGCTCA AACACATGCAGGCAACCAGTTATAGTTACAGCGCCACACTGCTGTCGTCC CAGCACCTGATGCAAATACTTCTTCGATGTATTCCACACCGGCGGCGGCA ACCCCGCACATGCTTAGGATCATGCACTGTCAGTATACACGGGAATTAAG CATCCTCATGAATGTCAGGAGCTACCATTGCTTGCGGTGAGAAGCGCCAA AGTTGACACCACACCGCCCCCCGCCGTGCCTGCCCCCCCACACCAGGTTC GACAAGCCGACGGCGAGTACGAAGACGTGTACGACTTCAAGAACATAGTC AAGGACCACCTCACGCCCGGCCCCATGTACGCCCAGGGCACCAGCACGCC TGTCCACCAGAAGTTCGGCGCGTTCAAGGCCATCGGCTGCGGCGCGTACC ACGCACTGGCCGTGACCGCCGCGGGCGCGCGCGTCTTCACGTGCGGTCTC AACAACTACGGCCAGCTCGGCACTGGCGATACCGACAACCGCGAGTTCTT GACGGAGGTCACTGCGCTCGACGGCTGGGCGGTTTCGTCCGTAACCGGCG GGACGCACCACTCGCTGGCGTTGTGCGCGACGGGCGCGGTGCTGGCCTTT GGCCGCAGCGACTACGGTCAGCTGGGGTCCTCGGAAGTGGACAAGGGGGC GGGGGGGTCGGAGCCCCTGCCGCGCCTGGTCGACGTGCCGAAGGCGGCGG GGAAGCCCGTGAAGATTGCCTCCGGCGCGAACCACTCCCTGTGCATCACC GACGCGTGCGGGGTGTACACGTGGGGGTACTCGGACGAGGGCGCGCTCGG GCACGGCAGCGAGGGGCAGGACGTCTGGCTGCCCAAGGCGATAGACTTTG CGAAGGCGGGCGCGGAGGTGGCAGGGATGCGCGTTGTGGACGCCGACGGG GGGGGCTCGCACAGCGCGATCGTGGGGGTGCTGCAAGCCGCGCGGCGGGG GTGA
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Coding sequence (CDS) from alignment at Contig_42:370512..374165-

>mRNA_5654 ID=mRNA_5654|Name=jgi.p|Trimin1|349385|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1473bp|location=Sequence derived from alignment at Contig_42:370512..374165- (Tribonema minus UTEX_B_3156 )
ATGAAGGTCCGGATTCGGTCCGACTTCCGCCGCGAATTCTACGCGCAAGT
CCGCGCGCTCAACATCCAGTTCGCGCAATGGGTGCACAAGGAACTGGCCG
CAGACCGCTCCGTAGACCTGACCCCGGGGGTCATAGACTACAACAGTTAC
ATCTCCACGCTCGAGGACCGATACCTGAGGGTCCCTGGCGCGGTGCTGAC
GTTCGGCAGCGGCGACTGCAACCAGCTGGGGCTGGGGACGGAGGATGCGG
ACAAGAACGTGCCGCGCCCCAGGATCGTTCCGTTCCTGAGGAAGGAGCGC
GTGGCGATGGTGGCGTGCGGCGGCCTGCACAACGTGGTGTGCACCATGGA
GGGGCGCGTGTTCACGTGGGGCTGCAACGACGACGGCGCGCTGGGGCGGC
TGACCAAAAATGAGGAGGAGGAGACGTGCGCGGGGGAGGTGGTGATGCGG
GGCGAGGTCATTAGACAGGTGGCAGCAGGCGACTGCCAGAGCTTGGCTGT
CACGCTGAGTGGCAAGGTGTATGCATGGGGCTGCCACAAGGATAAGGAAG
GGAAGCAGTGGCAAACTCCGCTGCCGAGGGAGGGGCCCAAGACAGCAAAG
CGCAAGCAGGAGACGCCCATGGTCGTTGTGAGTCTTGACAGAGTGGCGGA
GGTGCGGTGCTGTGCTTCAGCCAATGTGGCCCTGCGCCAGGATGGGAGCC
TCTGGTCCTGGGGGATAGGAGAGTCTTCGGAACTTGGGCGGCCCGCATGT
GACCTGAAAATGAAGGTTCGACAAGCCGACGGCGAGTACGAAGACGTGTA
CGACTTCAAGAACATAGTCAAGGACCACCTCACGCCCGGCCCCATGTACG
CCCAGGGCACCAGCACGCCTGTCCACCAGAAGTTCGGCGCGTTCAAGGCC
ATCGGCTGCGGCGCGTACCACGCACTGGCCGTGACCGCCGCGGGCGCGCG
CGTCTTCACGTGCGGTCTCAACAACTACGGCCAGCTCGGCACTGGCGATA
CCGACAACCGCGAGTTCTTGACGGAGGTCACTGCGCTCGACGGCTGGGCG
GTTTCGTCCGTAACCGGCGGGACGCACCACTCGCTGGCGTTGTGCGCGAC
GGGCGCGGTGCTGGCCTTTGGCCGCAGCGACTACGGTCAGCTGGGGTCCT
CGGAAGTGGACAAGGGGGCGGGGGGGTCGGAGCCCCTGCCGCGCCTGGTC
GACGTGCCGAAGGCGGCGGGGAAGCCCGTGAAGATTGCCTCCGGCGCGAA
CCACTCCCTGTGCATCACCGACGCGTGCGGGGTGTACACGTGGGGGTACT
CGGACGAGGGCGCGCTCGGGCACGGCAGCGAGGGGCAGGACGTCTGGCTG
CCCAAGGCGATAGACTTTGCGAAGGCGGGCGCGGAGGTGGCAGGGATGCG
CGTTGTGGACGCCGACGGGGGGGGCTCGCACAGCGCGATCGTGGGGGTGC
TGCAAGCCGCGCGGCGGGGGTGA
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