mRNA_5553 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|348089
Unique NamemRNA_5553
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|348089 vs. uniprot
Match: A0A835Z4L3_9STRA (Peroxisomal membrane protein PEX14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4L3_9STRA)

HSP 1 Score: 332 bits (851), Expect = 1.680e-113
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 2 
Query:   71 MSFREEMVARAVKFLLHPKVVDAPLSKKISFLEEKELTREEIDEALKRAESPESIGAAASTSKAKAQRETIQRFEHAGVQGVITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAAM 616
            MSFREEMVARAVKFLLHPKVVDAPLSKKISFLEEKELTREEIDEALKRAESPESIGAAASTSKAKAQRETIQRFEHAGVQGVITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAAM
Sbjct:    1 MSFREEMVARAVKFLLHPKVVDAPLSKKISFLEEKELTREEIDEALKRAESPESIGAAASTSKAKAQRETIQRFEHAGVQGVITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAAM 182
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BLAST of jgi.p|Trimin1|348089 vs. uniprot
Match: D8LIY3_ECTSI (Peroxisomal membrane protein PEX14 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY3_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 5.590e-17
Identity = 66/187 (35.29%), Postives = 100/187 (53.48%), Query Frame = 2 
Query:   71 MSFREEMVARAVKFLLHPKVVDAPLSKKISFLEEKELTREEIDEALKRAESPESIGAAASTSKAKAQRETIQRFEHAGV--QGVITGGVLHLSA-------VAAKDLGADAAG---------QARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAV 577
            +  R++MV RAV FL HPKV  AP +K+I+FL++K+LT EEI EAL++A    +  A+A T  A     T +RF+   V  + V +GG++ +S         A  D G    G         QA + L++I  +L+  G+S S+++SA V VR+   D   V   W  W+  +N PA   ++ G  V
Sbjct:    2 VDIRQDMVKRAVSFLRHPKVKGAPEAKQIAFLKDKQLTAEEIGEALRKAAELAAAEASAKTRAALVAAPT-KRFQKGSVRSEAVASGGIVFISGQTALPSPTAGDDSGEGDVGVAESLSPEQQAARALDKIKELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPARTVIQTGAIV 187
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BLAST of jgi.p|Trimin1|348089 vs. uniprot
Match: A0A3F2UCK5_9HYPH (RidA family protein n=1 Tax=Mesorhizobium sp. YM1C-6-2 TaxID=1827501 RepID=A0A3F2UCK5_9HYPH)

HSP 1 Score: 72.4 bits (176), Expect = 1.250e-12
Identity = 44/102 (43.14%), Postives = 63/102 (61.76%), Query Frame = 2 
Query:  308 QGVITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAA 613
            QGV   G+   SA  AKD   DAAGQ R+VL++IDA+L  +G  +S I+SAT+++ +   D  A+ + W+ W+  +  PA ACVEA  + P   V IQ+ AA
Sbjct:   14 QGVSWNGMFVTSAQVAKDFDLDAAGQTREVLDKIDALLAEQGYDKSNIVSATIWLADI-ADYAAMNSVWDAWVSTDEPPARACVEARFSSPRIKVEIQIMAA 114
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BLAST of jgi.p|Trimin1|348089 vs. uniprot
Match: A0A7U7ELF3_9PSED (Aminoacrylate peracid reductase RutC n=1 Tax=Pseudomonas carbonaria TaxID=2762745 RepID=A0A7U7ELF3_9PSED)

HSP 1 Score: 72.4 bits (176), Expect = 1.310e-12
Identity = 41/103 (39.81%), Postives = 58/103 (56.31%), Query Frame = 2 
Query:  308 QGVITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAAM 616
            + VI  G ++L+   A DL  D   Q R+ L  ID +L   G+ RSRI+SAT+++++   D   + AEW+ WL     PA ACVEA    P  LV I + AA+
Sbjct:   14 EAVIHNGTVYLAGQLADDLTGDICQQTRETLASIDRLLAEAGSDRSRILSATIYLKDIAADYAGLNAEWDAWLVPGTAPARACVEANMYAPEVLVEISIVAAL 116
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BLAST of jgi.p|Trimin1|348089 vs. uniprot
Match: A0A5Q2QE15_9GAMM (RidA family protein n=1 Tax=Litoricola lipolytica TaxID=418701 RepID=A0A5Q2QE15_9GAMM)

HSP 1 Score: 70.9 bits (172), Expect = 4.590e-12
Identity = 47/114 (41.23%), Postives = 68/114 (59.65%), Query Frame = 2 
Query:  281 IQRFEHAG--VQGVITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAAM 616
            IQRFE      + VI  G ++L    A D  AD + Q R  L +IDA+L++ G+ R+R++SAT++V+    D  A+ A W+ W+   + PA ACV+A  A  A LV I VTAA+
Sbjct:    2 IQRFETKARMSRAVIHNGTVYLCGQVAADADADISEQTRTTLAKIDALLESVGSDRTRLLSATIYVKTMD-DFAAMNAVWDAWVPEGHAPARACVQAAMARDALLVEITVTAAV 114
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BLAST of jgi.p|Trimin1|348089 vs. uniprot
Match: A0A4P6F7M9_9MICO (RidA family protein n=1 Tax=Agromyces protaetiae TaxID=2509455 RepID=A0A4P6F7M9_9MICO)

HSP 1 Score: 70.5 bits (171), Expect = 6.230e-12
Identity = 42/103 (40.78%), Postives = 64/103 (62.14%), Query Frame = 2 
Query:  308 QGVITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAAM 616
            Q V+ GG+ +L+   A   GAD   Q+R  L Q+DA+L+A G  +S++++AT+++ +  T G  + + W+ W+ GEN PA A VEA  A P   V  QVTAA+
Sbjct:   14 QAVVHGGIAYLAGQVAA--GADVVEQSRAALAQVDALLEAAGTDKSKLLTATIYLADIATFGD-MNSVWDEWVDGENPPARATVEAKLATPEFFVEFQVTAAI 113
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BLAST of jgi.p|Trimin1|348089 vs. uniprot
Match: A0A1H0GGX4_9HYPH (Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family n=1 Tax=Ensifer sp. YR511 TaxID=1855294 RepID=A0A1H0GGX4_9HYPH)

HSP 1 Score: 69.3 bits (168), Expect = 1.730e-11
Identity = 48/113 (42.48%), Postives = 66/113 (58.41%), Query Frame = 2 
Query:  281 IQRFEHAG-VQGVIT-GGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTAA 613
            I RFE    +  V+T GGV +L+ + A DL  D AGQ RQVL + DA ++     +SR++SAT+++R+  +D  A+   WE W+   N PA A  EA  A P  LV I  TAA
Sbjct:    2 IDRFEKGPRMSRVVTHGGVAYLAGITADDLSQDIAGQTRQVLAKADANMEKAKTDKSRLLSATIWLRDI-SDFDAMNVVWESWVDASNPPARATCEARLAKPQILVEITFTAA 113
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BLAST of jgi.p|Trimin1|348089 vs. uniprot
Match: UPI0010C11760 (RidA family protein n=5 Tax=Roseomonas TaxID=125216 RepID=UPI0010C11760)

HSP 1 Score: 68.6 bits (166), Expect = 3.510e-11
Identity = 40/93 (43.01%), Postives = 57/93 (61.29%), Query Frame = 2 
Query:  332 LHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTA 610
            ++L+ + A DL  D  GQ  +VL +IDA L+A G  ++R+++AT++V++   D GA+   W  WL     PA ACVEA  A P  LV I VTA
Sbjct:   23 VYLAGMTADDLSKDIKGQTAEVLAKIDAALEANGTDKTRMLTATIWVKHI-ADRGAMNEVWTPWLPPGGAPARACVEANMADPRHLVEIMVTA 114
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BLAST of jgi.p|Trimin1|348089 vs. uniprot
Match: UPI00200B8FAC (RidA family protein n=1 Tax=Roseomonas sp. NAR14 TaxID=2937791 RepID=UPI00200B8FAC)

HSP 1 Score: 67.8 bits (164), Expect = 6.790e-11
Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 2 
Query:  332 LHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTIQVTA 610
            ++L+ + A DL  D +GQ +QVL++IDA L+A G   +R++SA +++++ + D  A+   W  WL     PA ACV+A  A P  LV I +TA
Sbjct:   23 VYLAGMTADDLSQDVSGQTKQVLDKIDAALEANGTDNTRLLSAQIWLKDIR-DRDAMNKLWTAWLPAGGAPARACVQANMADPRHLVEIMITA 114
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BLAST of jgi.p|Trimin1|348089 vs. uniprot
Match: A0A1F4CVB5_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CVB5_9PROT)

HSP 1 Score: 67.4 bits (163), Expect = 7.950e-11
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 2 
Query:  314 VITGGVLHLSAVAAKDLGADAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAVPAQLVTI 598
            V+ G  ++L+ V AK+L  D  GQAR++L +ID +L   G+S+SR++SAT++V + +     V   W  W+  +N PA ACVEA  A P  LV I
Sbjct:   16 VVHGDTVYLAGVVAKNLDNDIKGQAREILAEIDRLLAKCGSSKSRLLSATIWVTDIRNR-APVNEVWSAWVDPKNLPARACVEARLADPRSLVEI 109
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|348089 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z4L3_9STRA1.680e-113100.00Peroxisomal membrane protein PEX14 n=1 Tax=Tribone... [more]
D8LIY3_ECTSI5.590e-1735.29Peroxisomal membrane protein PEX14 n=1 Tax=Ectocar... [more]
A0A3F2UCK5_9HYPH1.250e-1243.14RidA family protein n=1 Tax=Mesorhizobium sp. YM1C... [more]
A0A7U7ELF3_9PSED1.310e-1239.81Aminoacrylate peracid reductase RutC n=1 Tax=Pseud... [more]
A0A5Q2QE15_9GAMM4.590e-1241.23RidA family protein n=1 Tax=Litoricola lipolytica ... [more]
A0A4P6F7M9_9MICO6.230e-1240.78RidA family protein n=1 Tax=Agromyces protaetiae T... [more]
A0A1H0GGX4_9HYPH1.730e-1142.48Enamine deaminase RidA, house cleaning of reactive... [more]
UPI0010C117603.510e-1143.01RidA family protein n=5 Tax=Roseomonas TaxID=12521... [more]
UPI00200B8FAC6.790e-1139.78RidA family protein n=1 Tax=Roseomonas sp. NAR14 T... [more]
A0A1F4CVB5_9PROT7.950e-1142.11Uncharacterized protein (Fragment) n=1 Tax=Betapro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_19contigContig_19:1008271..1010252 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|348089|estExt_Genemark1.C_Ctg_190116
DescriptionEndoribonuclease L-PSP
COG categoryJ
Max annot lvl1236|Gammaproteobacteria
EggNOG OGsCOG0251@1|root,COG0251@2|Bacteria,1MZ5K@1224|Proteobacteria,1S756@1236|Gammaproteobacteria,3NNI5@468|Moraxellaceae
Evalue2.03e-13
Seed ortholog1392540.P256_02006
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEndoribonuclease L-PSP/chorismate mutase-like
Ec32 orthologEc-20_002010.1
TranscriptId348411
TrackFilteredModels1
ProteinId348089
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348089gene_5553Tribonema minus UTEX_B_3156 geneContig_19 1008271..1010252 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|348089Trimin1|348089|estExt_Genemark1.C_Ctg_190116Tribonema minus UTEX_B_3156 polypeptideContig_19 1008341..1010112 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_5553_1exon_5553_1Tribonema minus UTEX_B_3156 exonContig_19 1008271..1008378 +
exon_5553_2exon_5553_2Tribonema minus UTEX_B_3156 exonContig_19 1008481..1008526 +
exon_5553_3exon_5553_3Tribonema minus UTEX_B_3156 exonContig_19 1008664..1008699 +
exon_5553_4exon_5553_4Tribonema minus UTEX_B_3156 exonContig_19 1009188..1009391 +
exon_5553_5exon_5553_5Tribonema minus UTEX_B_3156 exonContig_19 1009888..1010252 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_5553UTR5_5553Tribonema minus UTEX_B_3156 five_prime_UTRContig_19 1008271..1008340 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_5553CDS_5553Tribonema minus UTEX_B_3156 CDSContig_19 1008341..1008378 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_5553UTR3_5553Tribonema minus UTEX_B_3156 three_prime_UTRContig_19 1010113..1010252 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_5553 ID=mRNA_5553|Name=jgi.p|Trimin1|348089|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=759bp|location=Sequence derived from alignment at Contig_19:1008271..1010252+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GACGCTCGGTGTGCACAGACAAACAGCGCAGCGCCAGCCAACACGTCCGG
AGAGGTGTGATTGGGGAGATATGTCGTTCAGGGAGGAGATGGTCGCCCGC
GCTGTCAAGTTCTTGTTACACCCGAAGGTAGTGGACGCGCCTCTCAGCAA
AAAGATCAGCTTTTTGGAAGAAAAGGAGCTGACGCGGGAGGAAATAGATG
AAGCACTGAAGCGGGCAGAGTCGCCAGAGTCTATTGGAGCAGCAGCATCC
ACAAGCAAGGCAAAGGCGCAACGAGAAACCATACAGCGGTTCGAACACGC
GGGAGTACAGGGTGTGATCACAGGTGGCGTCCTGCATCTGAGCGCAGTGG
CTGCCAAGGACCTGGGGGCGGATGCAGCAGGCCAGGCGCGGCAGGTTCTG
GAGCAAATAGATGCAGTGTTACAGGCAAAAGGCGCCAGCAGGAGCCGCAT
CATATCGGCGACAGTGTTTGTACGCAATGCACAAACAGATGGGGGGGCAG
TTGCTGCTGAGTGGGAGCTGTGGCTAGGAGGAGAGAATCACCCAGCGTTT
GCTTGCGTGGAAGCAGGCACTGCAGTGCCAGCGCAGTTGGTGACCATACA
AGTGACGGCAGCCATGTAAAAATAATCAGCTGCGCCATCCACATCATGTT
CATGTTTGCCTCTTGGTGGCAACACAATGGCACCTTCATGGATGGCAAGC
TACATCTTCACCAGCTGCAATTGCCAGCAGCACACAACACAAGAAAGCAA
AACACACCC
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protein sequence of jgi.p|Trimin1|348089

>Trimin1|348089|estExt_Genemark1.C_Ctg_190116 ID=Trimin1|348089|estExt_Genemark1.C_Ctg_190116|Name=jgi.p|Trimin1|348089|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=183bp
MSFREEMVARAVKFLLHPKVVDAPLSKKISFLEEKELTREEIDEALKRAE
SPESIGAAASTSKAKAQRETIQRFEHAGVQGVITGGVLHLSAVAAKDLGA
DAAGQARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWEL
WLGGENHPAFACVEAGTAVPAQLVTIQVTAAM*
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mRNA from alignment at Contig_19:1008271..1010252+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_5553 ID=mRNA_5553|Name=jgi.p|Trimin1|348089|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1982bp|location=Sequence derived from alignment at Contig_19:1008271..1010252+ (Tribonema minus UTEX_B_3156 )
GACGCTCGGTGTGCACAGACAAACAGCGCAGCGCCAGCCAACACGTCCGG
AGAGGTGTGATTGGGGAGATATGTCGTTCAGGGAGGAGATGGTCGCCCGC
GCTGTCAAGTACGTGCAGACTGAGCCTAATCGGGTGGGGGAGACTCGCCA
TGTCATGGAAAAAGCTGAGACCTGCTCCTGCGTGTGCTGTGTGCTGTCCT
GCTGCCACAGGTTCTTGTTACACCCGAAGGTAGTGGACGCGCCTCTCAGC
AAAAAGGTCAGTCTGAGTGCAGACATCATGTGTCATTACGACTGTTGTTT
GTGCCTGCTTTCTCCAGCTCGTTCCGCATGTTGATCCATCGCTCATCGCC
CTCTTGCTGCGCCTGTTGTCGCGTTGCTGTTCGCGACCTGCAGATCAGCT
TTTTGGAAGAAAAGGAGCTGACGCGGGAGGTAAGCGCCCTTTGCTGCTGA
CCTGGCTGAGCTTCACAGGAAGTTGAAGTAATTGTGATCCGTGAGCACTA
CTGGTCCTCTAGGAAGGGCTCACCAGCAACTAGTTTGCTTGCACTGACTG
GCTGCATTATCAGCAGAGTACAGGATGGACTGCGTGCGCAGACAAGATGC
TGGCCAGCATTTTTTAGCAGGCTCGTCGGGCTCGCTGCACATGCAGCTGA
CGTAATGATGGAATTATCGCGAAACCAAACGTACAGCCCCTTTTGCAACA
AAGAGCTCACCAGCAATCGGGTTTATCTGCACTAACTCAGTGCAGGATCA
ACGGAGTACAGAATACACAGATAAGGAGCTTGCGCCTGAAACATCCGCAA
TGTCTCAAACCTGTCAGACGCTTGACAAGGCAGAAAACACGCCTTATGTG
TGTTGAACTGCTACTATGGAAAAGCACAGTACTCATGGTTGCATGCGCTC
CACCGTTTTTTGATCAGGAAATAGATGAAGCACTGAAGCGGGCAGAGTCG
CCAGAGTCTATTGGAGCAGCAGCATCCACAAGCAAGGCAAAGGCGCAACG
AGAAACCATACAGCGGTTCGAACACGCGGGAGTACAGGGTGTGATCACAG
GTGGCGTCCTGCATCTGAGCGCAGTGGCTGCCAAGGACCTGGGGGCGGAT
GCAGCAGGCCAGGCGCGGCAGGTGGGATAACCTTCTTGTTGGTTTTGCCT
CTTGGAAGGATGCCGCTAAACAGCTGTCACGTTGATGACTATGTACATCC
AGCGGCCTGATTGACAGGCTACGCTTTGTTTACTGCACAATTGCTTGAGC
GCACTTGGGCATGTGTGTTGGCGATCAACATAGCAAGTACAACGGCGGCT
GACTTGAAATGGCGCCCATCGCTTTAAATGCAAAGACTATGGCGGGCTCT
GTCTTTATTTGCTTGCATGCAACACGGAAGTGGGCAGGTGCGTTGTAGCT
GTGCCTTAGGCATCATGGCGTGAACTGCTTGTAGTTGACTGACTCATGGG
GTAATGCACAATTGATTGGTTCTGTGTGTGGAGCCTAACGACTTTGGCTC
GTCTGTGTTTGCCAGTATGTATTTATATAATAAATTATGATGGTGACACG
GCACAAGCTGCGCTGTTTATCACGAAGTGTGTTGCTGCTGTTGGCTCATT
TGCGCCTGCTCTTTCAGGTTCTGGAGCAAATAGATGCAGTGTTACAGGCA
AAAGGCGCCAGCAGGAGCCGCATCATATCGGCGACAGTGTTTGTACGCAA
TGCACAAACAGATGGGGGGGCAGTTGCTGCTGAGTGGGAGCTGTGGCTAG
GAGGAGAGAATCACCCAGCGTTTGCTTGCGTGGAAGCAGGCACTGCAGTG
CCAGCGCAGTTGGTGACCATACAAGTGACGGCAGCCATGTAAAAATAATC
AGCTGCGCCATCCACATCATGTTCATGTTTGCCTCTTGGTGGCAACACAA
TGGCACCTTCATGGATGGCAAGCTACATCTTCACCAGCTGCAATTGCCAG
CAGCACACAACACAAGAAAGCAAAACACACCC
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Coding sequence (CDS) from alignment at Contig_19:1008271..1010252+

>mRNA_5553 ID=mRNA_5553|Name=jgi.p|Trimin1|348089|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=549bp|location=Sequence derived from alignment at Contig_19:1008271..1010252+ (Tribonema minus UTEX_B_3156 )
ATGTCGTTCAGGGAGGAGATGGTCGCCCGCGCTGTCAAGTTCTTGTTACA
CCCGAAGGTAGTGGACGCGCCTCTCAGCAAAAAGATCAGCTTTTTGGAAG
AAAAGGAGCTGACGCGGGAGGAAATAGATGAAGCACTGAAGCGGGCAGAG
TCGCCAGAGTCTATTGGAGCAGCAGCATCCACAAGCAAGGCAAAGGCGCA
ACGAGAAACCATACAGCGGTTCGAACACGCGGGAGTACAGGGTGTGATCA
CAGGTGGCGTCCTGCATCTGAGCGCAGTGGCTGCCAAGGACCTGGGGGCG
GATGCAGCAGGCCAGGCGCGGCAGGTTCTGGAGCAAATAGATGCAGTGTT
ACAGGCAAAAGGCGCCAGCAGGAGCCGCATCATATCGGCGACAGTGTTTG
TACGCAATGCACAAACAGATGGGGGGGCAGTTGCTGCTGAGTGGGAGCTG
TGGCTAGGAGGAGAGAATCACCCAGCGTTTGCTTGCGTGGAAGCAGGCAC
TGCAGTGCCAGCGCAGTTGGTGACCATACAAGTGACGGCAGCCATGTAA
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